Title The capacity of retinoic-acid to induce phenotype-switching in differentiated Th17 Cells as a control mechanism in immunological homeostasis Summary Clarifying the developmental relationship between immunosuppressive regulatory T cells (Tregs) and inflammatory helper T 17 (Th17) cells is essential for the development of our understanding of the delicate balance between homeostasis towards autoimmunity. However, the interactions between these lineages remain incompletely elucidated. Recent work has demonstrated considerable plasticity in differentiated Tregs, showing the capacity of T cells to undergo phenotype-switching that involves the down-regulation of the expression of prototypical Treg markers and the induction of the inflammatory Th17 phenotype. I seek to examine this phenotype-switching in reverse: to determine the capacity of Vitamin A metabolite retinoic acid to induce the Treg phenotype in differentiated Th17 cells and then to characterize the stability and function of the resulting population. Although retinoic acid has been identified as a factor that inhibits commitment to the Th17 lineage while supporting the expansion of the Treg subset, its effects have been characterized only on unfractionated populations or naïve CD4+ T cells. However, examining its effects on an isolated population of differentiated Th17 cells is of considerable interest and relevance for the further elucidation of the relationship between the Treg and Th17 lineages, and thus the balance between immunosuppression and autoimmunity. Background and Significance Effective immunological homeostasis relies on a continual balance between a number of factors, including helper T (Th) cell activation and regulatory T cell (Treg) suppression. When homeostasis is disrupted and the immune system tips in favor of activation, the host becomes susceptible to autoimmunity. Although it was originally believed that many autoimmune disorders, including rheumatoid arthritis (RA) and multiple sclerosis, partially resulted from an aberrant Th1 response, several studies in mice that demonstrated the deleterious effects of interferon-gamma (IFN-γ) deficiency called the role of the Th1 lineage in autoimmune pathogenesis into question (1-3). The recent discovery of another subset of helper T cells, termed Th17, breaks the long-accepted paradigms about T cell subsets in autoimmunity and also promises to resolve the contradictory evidence regarding the role of Th1 cells. Identified originally by their expression of the pro-inflammatory cytokine IL-17, Th17 cells have gained wide acceptance as a distinct subset of CD4+ cells with expression of unique master regulatory transcription factors retinoic acid receptor-related orphan receptor-gamma-t (RORγt) and RORα (4, 5). Th17 cells are induced by a number of pro-inflammatory cytokines including IL-1, IL-6, and IL-23, and in turn these cells secrete anti-microbial peptides and pro-inflammatory cytokines such as TNF, IL-21, and IL-22. Given that the populations of Th17 cells and Tregs exist in reciprocal proportions in both healthy and diseased tissues, (6, 7) elucidating the relationship between these lineages may yield critical insight into the disruption of immunological homeostasis. However, our current data about the interaction and relationship between these subsets is incomplete and at times contradictory. Initially it was believed that these two lineages were mutually exclusive phenotypes that shared a common progenitor and was determined by the local cytokine milieu. In the presence of TGF-, commitment of naive CD4+ T cells to the Th17 or Treg lineage depended on the presence or absence of IL-6, respectively (6). In support of the view that the lineages are exclusive and develop reciprocally, Tregs antagonize Th17 cell development by suppressing expression of RORγt (8), while retinoic acid acts as a switch that suppresses Th17 expansion and enhances Treg proliferation (9). However, recent studies suggest that the relationship between these two lineages cannot be characterized as a rigid dichotomy, but rather is more nuanced. In murine models, IL-17 production could be induced independent of IL-6, and naïve Th17 cells could be generated in IL6 KO mice following Treg depletion (10, 11). Initial studies of the differentiation of human Th17 cells also questioned the role of TGF-β in the commitment to this lineage, but others have since identified TGF-β as a critical cytokine for the induction or amplification of this lineage in combination with various cofactors, including IL-6, IL-1, IL-23, and IL-21(5, 12). Data suggest that TGF- amplifies Th17 expansion by preventing the maturation of the antagonistic Th1 lineage (13) and Tregs may actually facilitate Th17 commitment, through provision of TGF- and the induction of TGF- from antigen-presenting cells (14). Thus, the cytokines once considered critical to the development of this lineage as well as the relationship between Th17 cells and Tregs remain incompletely elucidated. Furthermore, accumulating evidence suggests that cells that are typically considered to be terminally differentiated Tregs in fact retain considerable phenotypic plasticity and can develop into cells that exhibit the characteristic Th17 phenotype. In the presence of immune modulator B7-DC XAb-, dectin-1-, or TLR4-activated dendritic cells, Tregs can be induced to downregulate Foxp3 expression and produce IL-17 instead (15-17). A recent study by Zheng et al suggests that inducible Tregs (iTregs) may be more resistant to this conversion than natural Tregs (nTregs), although activating nTregs with IL-2 and TGF- increased their resistance (18). ROR-γ-t but IL-17- T cells that co-express archetypal Treg cell markers (CD25 and Foxp3) have been observed in a variety of murine tissues, and Tregs apparently differentiate into IL-17 producers in the murine small intestine in vivo (8, 19). Thus, such phenotype-switching is not restricted to artificial culture systems, but may occur in response to fluctuations in the local cytokine milieu in vivo. Conversely, restimulation of murine Th17 cells with IL-6 and TGF- (in contrast to IL-23) induces a nonpathogenic phenotype that coexpresses IL-17 and IL-10, arguing that certain subsets within the Th17 lineage may exhibit regulatory rather than proinflammatory functions under certain conditions (20). In the context of the mechanisms by which stimulated Tregs differentiate into a subpopulation of IL-17 producing T cells, my project is designed to explore the mechanisms of the reverse phenotype-switching: namely, the exogenous factors that can induce differentiated Th17 cells into T cells with a characteristic Treg phenotype (typified by the expression of transcription regulator Foxp3, and costimulatory factors CD25 and CD127 (21).) In addition to cytokine expression, I will examine the resulting population for stability/memory and characteristic Treg function by determining the duration of Treg-marker expression and the population’s capacity to suppress T effector cells, respectively. Previous related work has led to the identification of vitamin A metabolite all-trans retinoic acid and rapamyacin as cofactors that inhibit Th17 differentiation and drive Treg expansion; however, these studies examined unfractionated cell populations or naïve CD4+ precursors rather than fully differentiated Th17 cells (9, 21-22). Thus, my project will contribute to the elucidation of the phenotype-switching and the degree of plasticity exhibited by highly-differentiated T cells by focusing on the under-studied mechanisms by which Th17 cells expressing characteristic pro-inflammatory cytokines can be polarized to display the Treg phenotype. In the broader context of immunological homeostasis and autoimmunity, the aim of this project is to explore mechanisms that can drive an imbalance between T cell populations; more knowledge in this field will be foundational for the design of highly-targeted and specific therapies aiming to abrogate autoinflammation by inducing immune regulation in diseased tissues. Main Objective To determine the extent to which exogenous all-trans retinoic acid induces helper T cells committed to the Th17 lineage to lose the characteristic Th17 phenotype and attain a Treg phenotype (Aim 1); To assess the memory/stability of this population by examining the duration of the Treg phenotype (Aim 2); To characterize the extent to which this population exhibits characteristic Treg function by determining its capacity to suppress T effector cells (Aim 3) Methodology Aim 1: Inducing Phenotype-Switching Cell isolation, polarization, and enrichment: Buffy coats of whole blood will be subjected to density-gradient centrifugation as prescribed by the standard procedure used for previous experiments in the Mellins lab. Adapting the already-optimized procedure outlined in “Rapid ex vivo isolation and long-term culture of human Th17 cells” by Streeck et al. (23), CD4+ T cells will be isolated by negative selection with magnetic bead (MACS) sorting and stimulated under non-lineage specific polarizing conditions for T cells (with a combination of PMA, ionomycin, costimulatory factors CD49d and CD28.) This population will then be enriched for IL-17 producing T cells by conjugating anti-IL-17 antibodies to avidin to form a highly specific capture complex as detailed by Streeck et al.; using this procedure, two rounds of positive selection have been shown to yield a purity of over 95% (23). Purity will be quantified by intracellular staining for IL-17 and FACS. Characterizing the effects of Retinoic Acid: Th17 cells will be cultured with exogenous retinoic acid and incubated overnight; the following morning cells will be transferred to fresh media and their phenotype assessed through flow cytometry. Expression of characteristic Treg markers (low CD127, high CD25) will be contrasted with expression of Th17-specific IL-17, CCR6, and CCR4. Quantitative PCR (qtPCR) will be performed in addition to assess the expression of transcriptional regulators of Foxp3 relative to ROR--t. Aim 2: Characterizing Stability Long-term cultures: The aforementioned population of enriched Th17 cells will be expanded in vitro for use in long-term cultures using the procedures outlined by Streeck et al. (23). Briefly, Th17 cells will be maintained in R10 medium in the presence of IL-2; these cells will be transferred to fresh media three times each week. Cultures will initially be stimulated on the second day of incubation with irradiated feeders and T cell stimulatory anti-CD3/anti-CD8 and re-stimulated every 3 weeks. Characterization of phenotype: Phenotype of Th17 cells incubated with exogenous retinoic acid will be determined at five distinct time points (6 hours, 24 hours, 2 days, 4 days, 6 days) over a week-long period. (Cells will be incubated with retinoic acid overnight and then transferred to fresh media. Time points assessed will be subject to change depending on the results of preliminary data.) Expression of characteristic Treg markers (low CD127, high CD25) will be assessed through flow cytometry and contrasted with expression of IL-17, CCR6, and CCR4 (chemokine receptors confirmed as prototypical Th17 markers by Acosta-Rodriguez et al. (24).) Aim 3: Assessing Function Suppression Assays: These assays will be modeled on the suppression assays described in studies examining phenotype-switching from Tregs to Th17 cells (21, 24) in addition to similar assays previously performed in the lab. In brief, the Th17 cell population will be co-cultured with CFSE-labeled CD4+CD25- T effectors (Teff) (isolated and enriched through a procedure similar to the one detailed above) 48 hours after incubation with retinoic acid. The expansion or decline of the Teff cell population will be quantified through flow cytometry (with intracellular staining with CD25 and IL-2 to differentiate between the Treg and Teff populations.) Experimental Timeline 6/2008-8/2009: Self-directed reading on Th17 cells with particular emphasis on their interactions with Tregs. I plan to continue to read two experimental articles per week from established journals in the field to keep myself updated on the most recent work in the field and gain background knowledge in experimental design. 6/22-7/3 (two weeks) I will spend the first two weeks refamiliarizing myself with cell-isolation and –polarization procedures by generating and enriching populations of Th17 cells from whole blood. I will check these populations for purity with a goal of at least 85% of all cells positive for IL-17. The populations isolated during these weeks will form the basis for my first long-term cultures, which I will maintain and check for cell vitality at least twice a week. I will run a preliminary experiment assessing the effects of incubation of these cells with retinoic acid following the third isolation. 7/6-7/17 (two weeks) This time will be spent characterizing the effects of incubation with retinoic acid. I will repeat the procedures outlined for this above (see Aim 1) at least three times during this period, using a combination of qt-PCR and flow cytometry to assess the phenotype of these cells. In addition, I will prepare at least two buffy coats to expand my long-term cultures. Previously-established cultures will be maintained. 7/20-8/7 (three weeks) Stability assays as described above will be performed during this period. Each Monday and the second Wednesday of this period I will start a new week-long assay from my previouslyestablished cultures for a total of four sets of data. Depending on the vitality of previous cultures, one or more buffy coats will be processed for the establishment of new long-term cultures of Th17 cells; existing long-term cultures will be maintained. 8/7-8/29 (three weeks) Suppression assays will be performed the first two Mondays and the first Wednesday, leaving the final week open for another suppression assay or a repetition of stability or phenotypical assays. Long-term cultures will be maintained for the first two weeks, and the third week will be primarily devoted to a comprehensive assessment of data as a whole. I plan to present an overview of my findings to the lab late in the last week during lab meeting. Resources This project will be carried out under the supervision of principal investigator Professor Elizabeth Mellins, and postdoctoral fellow Dr. Claudia Macaubas. My internship this past summer has familiarized me with the workings and dynamics of the Mellins lab, which will provide me with the necessary equipment and reagents to carry out my project. Preparation Although I have not begun any wet-lab work on this particular project, my internship this past summer in Betsy Mellins’ lab in the Stanford Medical School introduced me to lab techniques (in particular, immunologic-based assays and equipment including Western-blotting, cell-sorting and –staining, PCR, and flow cytometry) that will be required for this project. I worked with a different cell type this past summer but feel comfortable adapting the techniques I practiced with monocytes to T cells and gained experience in trouble-shooting experiments that initially result in unsatisfactory isolations and low yields. Additionally, I have been reading extensively on the subject of Th17 cells since the middle of last summer and currently have a review concerning the involvement of Th17 cells in rheumatoid arthritis under review for publication in Clinical Immunology. My familiarity with both the subject-matter and the lab procedures will facilitate my work this summer. Budget $2000 Housing through the Summer Research College (6/16/08-9/05/08) $1500 19-meals a week meal plan $1700 Summer Stipend (12 weeks) Total = $5200 References 1. Takayanagi, H. et al. 2000. T-cell-mediated regulation of osteoclastogenesis by signalling cross-talk between RANKL and IFN-. Nature 408: 600-605. 2. Huang, W. et al. 2002. Exposure to receptor-activator of NFB ligand renders preosteoclasts resistant to IFN- by inducing terminal differentiation. Arthritis Res Ther 5:R49. 3. Sato, K. et al. 2006. Th17 functions as an osteoclastogenic helper T cell subset that links T cell activation and bone destruction. 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