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Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius and Lactobacillus casei. Appl. Environ. Microbiol. 72:3131-3146. (IF: 3.778). 76. Ventura, M., C. Canchaya, V. Bernini, A. Del Casale, F. Dellaglio, E. Neviani, G. F. Fitzgerald and D. van Sinderen. 2005. Genetic characterization of hrcA locus in Bifidobacterium breve UCC 2003. Appl. Environ. Microbiol. 71:8998-9007. (IF: 3.778). 77. Ventura, M., Z. Ziding, J.G. Kenny, M. Cronin, C. Canchaya, G. F. Fitzgerald and D. van Sinderen. 2005. The ClgR protein regulates the transcription of the clpP operon in Bifidobacterium breve UCC 2003. J. Bacteriol. 187:8411-8426. (IF: 3.993). 78. Ventura, M., J.H. Lee, C. Canchaya, R. Zink, S. Leahy, J.A. Moreno- Munoz, M. O’Connell-Motherway, D. Higgins, G. F. Fitzgerald, D. J. O’Sullivan and D. van Sinderen. 2005. Prophage-like elements in bifidobacteria: insights from genomics, transcription, integration, distribution and phylogenetic analysis. Appl. Environ. Microbiol. 71:8692-8705. (IF: 3.778). 79. Ventura, M, J.G. Kenny, Z. Zhang, G.F. Fitzgerald, and D. van Sinderen. 2005. The clpB gene of Bifidobacterium breve UCC 2003: transcriptional analysis and first insights into stress induction. Microbiology. 151:2861-2872. (IF: 3.139). 80. Ventura, M., G.F. Fitzgerald, and D. van Sinderen. 2005. Genetic and transcriptional organization of the clpC locus in Bifidobacterium breve UCC 2003. Appl. Environ. Microbiol. 71:6282-6291. (IF: 3.778). 81. Ventura, M., R. Zink, G.F. Fitzgerald, and D. van Sinderen. 2005. Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and its application in bifidobacterial tracing. Appl. Environ. Microbiol. 71:487-500. (IF: 3.778). 82. Ventura, M., C. Canchaya, R. Zink, G.F. Fitzgerald, and D. van Sinderen. 2004. Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional and phylogenetic analysis. Appl. Environ. Microbiol. 70:6197-209. (IF: 3.778). 83. Ventura, M., D. van Sinderen, G.F. Fitzgerald, and R. Zink. 2004. Insights into the taxonomy, genetics and physiology of bifidobacteria. Antonie van Leeuwenhoek. 86:205223 (review). (IF: 1.964). 84. Ventura, M. and H. Brüssow. 2004 Temporal transcription map of the virulent Streptococcus thermophilus bacteriophage Sfi19. Appl. Environ. Microbiol. 70:5041-5046. (IF: 3.778). 85. Masco L., M. Ventura, R. Zink, G. Huys and J. Swings. 2004. Polyphasic taxonomic analysis of Bifidobacterium animalis and Bifidobacterium lactis reveals relatedness at subspecies level: reclassification of Bifidobacterium animalis as Bifidobacterium animalis subsp. animalis comb. nov. and Bifidobacterium lactis as Bifidobacterium animalis subsp. lactis comb. nov. Int. J. Syst. Evol. Microbiol. 54:1137-43. (IF: 2.662). 86. Ventura M., C. Canchaya, D. van Sinderen, G.F. Fitzgerald, and R. Zink. 2004. Bifidobacterium lactis DSM 10140: identification of the atp (atpBEFHAGDC) operon, its genetic structure, characterization and phylogenic analysis. Appl. Environ. Microbiol. 70:3110-3121. (IF: 3.778). 87. Ventura M., C. Canchaya, R.D. Pridmore, and H. Brüssow. 2004. The prophages of Lactobacillus johnsonii NCC533: comparative genomics, transcription and microarray analysis. Virology 320:229-242. (IF: 3.525). 88. Ventura M., and R. Zink. 2003. Comparative sequence analysis of the tuf and recA genes, as well as RFLP of the ITS-sequences supplies additional tools to discriminate Bifidobacterium lactis from Bifidobacterium animalis. Appl. Environ. Microbiol. 69:75177522. (IF: 3.778). 89. Ventura M., C. Canchaya, V. Meylan, T.R. Klaenhammer, and R. Zink. 2003. Analysis, characterization and loci of the tuf genes in Lactobacillus and Bifidobacterium and their direct application for species identification. Appl. Environ. Microbiol. 69:6908-6922. (IF: 3.778). 90. Ventura M., C. Canchaya, M. Kleerebezem, W.M. de Vos, R.J. Siezen, and H. Brüssow. 2003. The prophage sequences of Lactobacillus plantarum strain WCFS1. Virology. 316:245-255. (IF: 3.525). 91. Ventura M., C. Canchaya, D. Pridmore, and H. Brüssow. 2003. Integration and distribution of Lactobacillus johnsonii prophages. J. Bacteriol. 185:4603-4608. (IF: 3.993). 92. Blatny J.M., M. Ventura, E.M. Rosenhaven, P.A. Risoen, M. Lunde, H. Brüssow, and I.F. Nes. 2003. Transcriptional and regulatory studies of the genetic elements involved in the lysogenic-lytic commitment and the identification of the Cro-like protein ORF76 of the temperate lactococcal bacteriophage ΦLC3. Mol. Gen. Genomics. 269:487-498. (IF: 2.345). 93. Jankovic I., M. Ventura, V. Meylan, M. Rouvet, and R. Zink. 2003. Contribution of Aggregation Promoting Factor (APF) to maintenance of cell shape in Lactobacillus gasseri 4B2. J. Bacteriol. 185:3288-3296. (IF: 3.993). 94. Ventura M., V. Meylan, and R. Zink. 2003. Identification and tracing of Bifidobacterium species by Enterobacterial Repetitive Intergenic Consensus (ERIC) Sequences. Appl. Environ. Microbiol. 69:4286-4301. (IF: 3.778). 95. Desiere F., S. Lucchini, C. Canchaya, M. Ventura & H. Brüssow. 2002. Comparative genomics of phages and prophages in lactic acid bacteria. Antonie van Leeuwenhoek. 82:7391. (review). (IF: 1.964). 96. Ventura M., and R. Zink. 2002. Specific identification and molecular typing analysis of Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis. FEMS Microbiol. Lett. 217:141-154. (IF: 2.068). 97. Ventura M., and R. Zink. 2002. Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis. Appl. Environ. Microbiol. 68:6429-6434. (IF: 3.778). 98. Ventura M., I. Jankovic, D.C. Walker, R.D. Pridmore, and R. Zink. 2002. Identification and characterization of novel surface proteins in Lactobacillus johnsonii and Lactobacillus gasseri. Appl. Environ. Microbiol. 68:6172-6181. (IF: 3.778). 99. Ventura M., A. Bruttin, C. Canchaya, and H. Brüssow. 2002. Transcription analysis of Streptococcus thermophilus in the lysogenic state. Virology. 302:21-31. (IF: 3.525). 100. Ventura M., S. Foley, A. Bruttin, C. Canchaya, and H. Brüssow. 2002. Transcription mapping as a tool in phage genomics: the case of the temperate Streptococcus thermophilus phage Sfi21. Virology. 296:62-76. (IF: 3.525). 101. Ventura M., R. Reniero, and R. Zink. 2001. Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach. Appl. Environ. Microbiol. 67:2760-2765. (IF: 3.778). 102. Ventura M., M. Elli, R. Reniero, R. Zink. 2001. Molecular microbial analysis of human intestinal Bifidobacterium isolates from different environments by the speciesspecific amplified ribosomal DNA restriction analysis (ARDRA). FEMS Microbiology ecology. 36:113-121. (IF: 3.157). 103. Ventura M., I. A. Casas, L. Morelli and M. L. Callegari. 2000. Rapid Amplified Ribosomal DNA Restriction Analysis (ARDRA) identification of Lactobacillus spp. isolated from fecal and vaginal samples. Systematic and Applied Microbiology. 23:504-509. (IF: 2.037). 104. Ventura M., L. Morelli and M. L. Callegari. 2000. S-layer gene as a molecular marker for identification of Lactobacillus helveticus. FEMS Microbiology Letters 189:275279, 2000. (IF: 2.068). 105. Ventura M., M.L. Callegari, L. Morelli. 1999. Surface layer variations affecting phage adsorption on seven Lactobacillus helveticus strains. Annali di Microbiologia ed Enzimologia 49:55-63, 1999. (IF: 0.078).