complete publications list

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1. Hevia, A., Milani, C., López, P., Cuervo, A., Duranti, S., Turroni, F., González, S., Suárez,
A., Gueimonde, M., Ventura, M., Sánchez, B., and Margolles, A. 2014. Intestinal dysbiosis
associated with Systemic Lupus Erythematosus. mBio 30;5(5). pii: e01548-14. (IF: 6.87).
1. Arboleya, S., Sánchez, B., Milani, C., Duranti, S., Solís, G., Fernández, N., de los ReyesGavilán, C., Ventura, M., Margolles, A., Gueimonde. M. 2014. Intestinal microbiota
development in preterm neonates and effect of perinatal antibiotics. The Journal of
Pediatrics. (IF: 3.7).
2. De Angelis, M., Bottacini, F., Fosso, B., Kelleher, P., Calasso, M., Di Cagno, R., Ventura,
M., Picardi, E., van Sinderen, D., Gobbetti, M. Lactobacillus rossiae, a vitamin B12
producer, represents a metabolically versatile species within the genus Lactobacillus. 2014.
PloS One. (in press). (IF: 4.3).
3. Bottacini, F., Ventura, M., van Sinderen, D. and O'Connell Motherway, M. 2014. Diversity,
ecology and intestinal function of bifidobacteria. Microb Cell Fact. Suppl 1:S4. S1-S4. (IF:
4.25)
4. Milani, C., Lugli, G., Turroni, F., Mancabelli, L., Duranti, S., Viappiani, A., Mangifesta, M.,
Segata, N., van Sinderen, D., and Ventura, M. 2014. Evaluation of bifidobacterial
community composition in the human gut by means of a targeted amplicon sequencing
(ITS) protocol. FEMS Microbiology Ecology (in press) (IF: 3.87).
5. Turroni, F., Duranti, S., Bottacini, F., Guglielmetti, S., van Sinderen, D., and Ventura, M.
2014. Bifidobacterium bifidum as an example of a specialized human gut commensal.
Frontiers in Microbiology 5:437. (IF: 3.9)
6. Milani, C., Lugli, G.A., Duranti, S., Turroni, F., Bottacini, F., Mangifesta, M., Sanchez, B.,
Viappiani, A., Mancabelli, L., Taminiau, B., Delcenserie, V., Barrangou, R., Margolles, A.,
van Sinderen, D., and Ventura, M. 2014. Genome encyclopaedia of type strains of the
genus Bifidobacterium. Appl. Environ. Microbiol. 80(20):6290-302 (IF: 3.95).
7. Lugli, G.A., Milani, C., Turroni, F., Duranti, S., Ferrario, C., Viappiani, A., Mancabelli, L.,
Mangifesta, M., Taminiau, B., Delcenserie, V., van Sinderen, D. and Ventura, M. 2014.
Investigation of the evolutionary development of the genus Bifidobacterium by comparative
genomics. Appl. Environ. Microbiol. 80(20):6383-94. (IF: 3.95).
8. Duranti, S., Turroni, F., Lugli, G.A., Milani, C., Viappiani, A., Mangifesta, M., Gioiosa, L.,
Palanza, P., van Sinderen, D., and Ventura, M. 2014. Genomic characterization and
transcriptional studies of the starch-utilizing Bifidobacterium adolescentis 22L. Appl.
Environ. Microbiol. 80(19):6080-90 (IF: 3.95).
9. Guglielmetti, S., Balzaretti, S., Taverniti, V., Miriani, M., Milani, C., Scarafoni, A., Corona,
S., Ciranna, A., Arioli, S., Santala, V., Iametti, S., Bonomi, F., Ventura, M., Mora, D., and
Karp, M. 2014. Characterization of TgaA, a VirB1-like component belonging to a putative
type IV secretion system of Bifidobacterium bifidum MIMBb75. Appl. Environ. Microbiol.
80(17):5161-9 (IF: 3.95).
10. Turroni, F., Serafini, F., Mangifesta, M., Arioli, S., Mora, D., van Sinderen, D., and
Ventura, M. 2014. Expression of sortase-dependent pili of Bifidobacterium bifidum
PRL2010 in response to environmental gut conditions. FEMS Microbiol. Lett. 357(1):23-33
(IF: 2.049).
11. Egan, M., O'Connell-Motherway, M., Ventura, M. and van Sinderen, D. 2014. Metabolism
of sialic acid by Bifidobacterium breve UCC2003. Appl. Environ. Microbiol. 80(14):441426. (IF: 3.95).
12. Serafini, F., Turroni, F., Ruas-Madiedo, P., Lugli, G.A., Milani, C., Duranti, S., Zamboni,
N., Bottacini, F., van Sinderen, D., Margolles A., and Ventura, M. 2014. Kefir fermented
milk and kefiran promote growth of Bifidobacterium bifidum PRL2010 and modulate its
gene expression. Int. J. Food Microbiol. 178:50-9. (IF: 3.143).
13. Bottacini, F., O' Connell Motherway, M., Kuczynski, J., O' Connell, K.J., Serafini, F.,
Duranti, S., Milani, C., Turroni, F., Lugli, G.A., Zomer, A., Zhurina, D., Riedel, C.,
Ventura, M., and van Sinderen, D. 2014. Comparative genomics of the Bifidobacterium
breve taxon. BMC Genomics 1;15:170. (IF: 4.40).
14. Lugli, G. A., Duranti, S., Milani, C., Turroni, F., Viappiani, A., Mangifesta, M., van
Sinderen, D. and Ventura, M. 2014. Genome sequence of Bifidobacterium moukalabense
DSM 27321 highlights closest phylogenetic relatedness with Bifidobacterium dentium
taxon. Genome Announcements. 20;2(1).
15. Turroni, F., Taverniti, V., Ruas-Madiedo, P., Duranti, S., Guglielmetti, S., Lugli, G.A.,
Gioiosa, L., Palanza, P., Margolles, A., van Sinderen, D., and Ventura, M. 2014.
Bifidobacterium bifidum PRL2010 modulates host innate immune response. Appl. Environ.
Microbiol. 80:730-740. (IF: 3.778).
16. Ferrario, C., Ricci, G., Milani, C., Lugli, G.A., Ventura, M., Eraclio, G., Borgo, F., and
Fortina, G. 2014. Lactococcus garvieae: Where Is It From? A First Approach to Explore the
Evolutionary History of this Emerging Pathogen. PloS One. 8:e84796. (IF: 4.3).
17. Ventura, M., Turroni, F., Lugli, G.A., and van Sinderen, D. 2014. Bifidobacteria and
humans: our special friends, from ecological to genomics perspectives. Journal of the
Science of Food and Agriculture. 94(2):163-8 (IF: 1.759).
18. Hidalgo-Cantabrana, C., Sanchez, B., Milani, C., Ventura, M., Margolles, A., and RuasMadiedo, P. 2014. Exopolysaccharide biosynthesis in Bifidobacterium spp.: genomic
overview and biological functions. Appl. Environ. Microbiol. 80:9-18. (IF: 3.778).
19. Turroni, F., Serafini, F., Foroni, E., Duranti, S., O’Connell Motherway, M., Taverniti, V.,
Mangifesta, M., Milani, C., Viappiani, A., Roversi, T., Sánchez, B., Santoni, A., Gioiosa, L.,
Ferrarini, A., Delledonne, M., Margolles, A., Piazza, L., Palanza, P., Bolchi, A.,
Guglielmetti, S., van Sinderen D., and Ventura, M. 2013. The role of sortase-dependent pili
of Bifidobacterium bifidum PRL2010 in modulating bacterium-host interactions.
Proceedings of the National Academy of Sciences of the United States of America (PNAS).
110(27):11151-6. (IF: 9.432).
20. O Connell, K., O'Connell-Motherway, M., O'Callaghan, J., Fitzgerald, G., Ross, R.P.,
Ventura, M., Stanton, C., and van Sinderen, D., 2013. Metabolism of four α-glycosidic
linkage-containing oligosaccharides by Bifidobacterium breve UCC2003. Appl. Environ.
Microbiol. 79:6280-6292. (IF: 3.778).
21. Milani, M., Hevia, A., Foroni, E., Duranti, S., Turroni, F., Lugli, G.A., Sanchez, B., Martín,
R., Gueimonde, M., van Sinderen, D., Margolles, A., and Ventura, M. 2013. Assessing the
fecal microbiota: an optimized Ion Torrent 16S rRNA gene-based analysis protocol. PloS
One. 8(7):e68739. (IF: 4.3).
22. Milani, C., Duranti, S., Lugli, G.A., Bottacini, F., Strati, F., Arioli, S., Foroni, E., Turroni,
F., van Sinderen, D., and Ventura, M. 2013. Comparative genomics of Bifidobacterium
animalis subsp. lactis reveals a strict monophyletic bifidobacterial taxon Appl. Environ.
Microbiol. 79(14):4304-4315. (IF: 3.778)
23. Serafini, F., Strati, F., Madiedo, P.R., Turroni, F., Foroni, E., Duranti, S., Milano, F., Perotti,
A., Viappiani, A., Guglielmetti, S., Buschini, A., Margolles, A., van Sinderen, D., and
Ventura, M. 2013. Evaluation of adhesion properties and antibacterial activities of the
infant gut commensal Bifidobacterium bifidum PRL2010. Anaerobe (IF: 2,409).
24. Turroni, F., Ventura, M., Buttó, L.F., Duranti, S., O’Toole, P.W., O’Connell Motherway,
M., and van Sinderen, D. 2013. Molecular dialogue between the human gut microbiota and
the host: a Lactobacillus and Bifidobacterium perspective. Cellular and Molecular Life
Sciences (IF: 6.570).
25. Duranti, S., Turroni, F., Milani, C., Foroni, E., Bottacini, F., Dal Bello, F., Ferrarini, A.,
Delledonne, M., van Sinderen, D., and Ventura, M. 2013. Exploration of genomic diversity
and core genome of the Bifidobacterium adolescentis phylogenetic group by means of a
polyphasic approach. Appl. Environ. Microbiol. 79(1):336-46. (IF: 3.778).
26. LeBlanc, J.G., Milani, C., Savoy de Giori, G., Sesma, F., van Sinderen, D., and Ventura, M.
2013. Bacteria as vitamin suppliers to their host: a gut microbiota perspective. Curr. Opin.
Biotechnol. 24(2):160-8. (IF. 8.934).
27. Gueimonde, M., Ventura, M., Margolles, A., and Sanchez, B. 2012. Genome sequence of
the immunomodulatory strain Bifidobacterium bifidum LMG 13195. J. Bacteriol.
194(24):6997. (IF: 3.993).
28. Bottacini, F., Milani, C., Turroni, F., Sánchez, B., Foroni, E., Duranti, S., Serafini, F.,
Viappiani, A., Strati, F., Ferrarini, A., Delledonne, M., Henrissat, B., Coutinho, P.,
Fitzgerald, G.F., Margolles, A., van Sinderen, D., and Ventura, M. 2012. Bifidobacterium
asteroides PRL2011 genome analysis reveals clues for colonization of the insect gut. PloS
One 7(9):e44229. (IF: 4.3).
29. Alvarez-Martin, P., O'Connell-Motherway, M., Turroni, F., Foroni, E., Ventura, M., and
van Sinderen, D. 2012. A two-component regulatory system controls serpin expression in
Bifidobacterium breve UCC2003. Appl. Environ. Microbiol. 78(19):7032-41. (IF: 3.778).
30. Ventura, M., Turroni, F., O’Connell Motherway, M., MacSharry, J., and van Sinderen, D.
2012. Host-microbe interactions that facilitate gut colonization by commensal
bifidobacteria. Trends in Microbiology 20(10):467-476. (IF: 7.910).
31. Gueimonde, M., Bottacini, F., van Sinderen, D., Ventura, M., Margolles, A., and Sanchez,
B. 2012. Genome sequence of the human breast-milk isolate Parascardovia denticolens
IPLA 20019. J. Bacteriol 194(17):4776-7. (IF: 3.993).
32. Serafini, F., Turroni, F., Guglielmetti, S., Gioiosa, L., Foroni, E., Sanghez, V.,
Bartolomucci, A., O'Connell Motherway, M., Palanza, P., van Sinderen, D., and Ventura
M. 2012. An efficient and reproducible method for transformation of genetically recalcitrant
bifidobacteria. FEMS Microbiol. Lett. 333(2):146-52. (IF: 2.04).
33. Turroni, F., Strati, F., Foroni, E., Serafini, F., Duranti, S., van Sinderen D., and Ventura, M.
2012. Analysis of the predicted carbohydrate transport systems encoded by Bifidobacterium
bifidum PRL2010. Appl. Environ. Microbiol. 78(14):5002-12. (IF: 3.778).
34. Turroni, F., Peano, C., Pass, D., Foroni, E., Severgnini, M., Claesson, M., Kerr, C.,
Hourihane, J., Murray, D., Fuligni, F., Gueimonde, M., Margolles, A., De Bellis, G.,
O’Toole, P.W., van Sinderen, D., Marchesi, J., and Ventura, M. 2012. Diversity of
bifidobacteria within the infant gut microbiota. PloS One 7(5):e36957. (IF: 4.3).
35. González-Rodríguez, I., Sanchez, B., Ruiz, L., Turroni, F., Ventura, M., Ruas-Madiedo, P.,
Gueimonde, M., and Margolles, A. 2012. Role of extracellular transaldolase from
Bifidobacterium bifidum in mucin adhesion and aggregation. Appl. Environ. Microbiol.
78(11):3992-8. (IF: 3.778).
36. Ruiz, L., Gueimonde, M., Ruas-Madiedo, P., Ribbera, A., de los Reyes-Gavilan, C.,
Ventura, M., Margolles, A., and Sanchez, B. 2012. Molecular clues to understand the
aerotolerant phenotype of Bifidobacterium animalis subsp. lactis. Appl. Environ. Microbiol.
78(3):644-50. (IF: 3.778).
37. Ventura, M., Turroni, F., and van Sinderen, D. 2012. Probiogenomics as a tool to obtain
genetic insights into adaptation of probiotic bacteria to the human gut. Bioengineered Bugs.
1;3(2).
38. Turroni, F., Foroni, E., Montanini, B., Viappiani, A., Strati, F., Duranti, F., Ferrarini, A.,
Delledonne, M., van Sinderen D., and Ventura M. 2011. Global genome transcription
profiling of Bifidobacterium bifidum PRL2010 under in vitro conditions and identification
of reference genes for quantitative Real-Time PCR. Appl. Environ. Microbiol. 77(24):857887. (IF: 3.778).
39. Bottacini, F., Dal Bello, F., Turroni, F., Milani, C., Duranti, S., Foroni, E., Viappiani, A.,
Strati, F., Mora, D., van Sinderen, D., and Ventura, M. 2011. Complete genome sequence
of Bifidobacterium animalis subsp. lactis BLC1. J. Bacteriol. 193(22):6387-8. (IF: 3.993).
40. Turroni, F., Foroni, E., Serafini, F., Viappiani, A., Montanini, B., Bottacini, F., Ferrarini, A.,
Bacchini, P.L., Rota, C., Delledonne, M., Ottonello, S., van Sinderen, D. and Ventura, M.
2011. The ability of Bifidobacterium breve to grow on different milk types: exploring
metabolism through genome analyses. Appl. Environ. Microbiol. 77(20):7408-17. (IF:
3.778).
41. Foroni, E., Serafini, F., Amidani, D., Turroni, F., He, F., Bottacini, F., O’Connell
Motherway, M., Viappiani, A., Zhang, Z., Rivetti, C., van Sinderen, D. and Ventura, M.
2011. Genetic analysis and morphological identification of pilus-like structures in members
of the genus Bifidobacterium. Microbial Cell Factories 10 Suppl 1:S16. (IF. 4.54).
42. O'Connell Motherway, M., Zomer, A., Leahy, S., Reunanen, J., Bottacini, F., Claesson,
M.J., O’Brien, F., O’Flynn, K., Casey, P.C., Moreno-Munoz, J., Kearney, B., Houston, B.,
O’Mahony, C., Higgins, D.G., Shanahan F., Palva A., de Vos,W., Fitzgerald, G.F.,
Ventura, M., O’Toole, P.O., and van Sinderen D. 2011. Functional genome analysis of
Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential
and conserved host-colonization factor. Proceedings of the National Academy of Sciences of
the United States of America (PNAS) 108(27):11217-22 (IF: 9.432).
43. Turroni, F., Milani, C., van Sinderen, D., and Ventura, M. 2011. Genetic strategies for
mucin metabolism in Bifidobacterium bifidum PRL2010: an example of possible humanmicrobe co-evolution. Gut Microbes 2(3):183-9. (IF: 2).
44. Serafini, F., Bottacini, F., Viappiani, A., Baruffini, E., Turroni, F., Foroni, E., Lodi, T., van
Sinderen, D., and Ventura, M. 2011. Investigation of mupirocin susceptibility in
bifidobacteria: physiological and genetic insights. Appl. Environ. Microbiol. 77(9):3141-6.
(IF: 3.778).
45. Turroni, F., van Sinderen D., Ventura, M. 2011. Genomics and ecological overview of the
genus Bifidobacterium. Int. J. Food Microbiol. 149(1):37-44. (IF: 3.143).
46. Cronin M, Ventura M, Fitzgerald GF, van Sinderen D. 2011. Progress in genomics,
metabolism and biotechnology of bifidobacteria. Int. J. Food Microbiol. 149(1):4-18. (IF:
3.143).
47. Ventura, M., Sozzi, T., Turroni, F., Matteuzzi, D., and D. van Sinderen. 2011. The impact
of bacteriophages on probiotic bacteria and gut microbiota diversity. Genes and Nutrition J.,
6(3):205-7.
48. Turroni, F., Bottacini, F., Foroni, E., Mulder, I., Kim, J.H., Zomer, A., Sánchez, B., Bidossi,
A., Ferrarini, A., Giubellini, V., Delledonne, M., Henrissat, B., Coutinho, P., Oggioni, M.,
Fitzgerald, G.F., Mills, D., Margolles, A., Kelly, D., van Sinderen, D., and Ventura, M.
2010. Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways
for host-derived glycan foraging. Proceedings of the National Academy of Sciences of the
United States of America (PNAS) 107(45):19514-9. (IF: 9.432).
49. Bottacini, F., Medini, D., Pavesi, A., Turroni, F., Foroni, E., Riley, D., Giubellini, V.,
Tettelin, H., van Sinderen, D., and Ventura, M. 2010. Comparative genomics of the genus
Bifidobacterium. Microbiology 156(Pt 11):3243-54. (IF: 3.025).
50. Canchaya C, Giubellini V, Ventura M, de los Reyes-Gavilán CG, Margolles A. Mosaic-like
sequences containing transposon, phage, and plasmid elements among Listeria
monocytogenes plasmids. 2010. Appl. Environ. Microbiol. 76:4851-7. (IF: 3.778).
51. Turroni, F., Foroni, E., O’Connel Motherway M., Bottacini, F., Giubellini, V., Zomer, A.,
Ferrarini, A., Delledonne, M., Zhang, Z., van Sinderen D., and Ventura M. 2010.
Characterization of the serpin-encoding gene of Bifidobacterium breve 210B. Appl.
Environ. Microbiol. 76(10):3206-19 (IF: 3.778).
52. Ventura, M., Turroni, F., Foroni, E., Duranti, E., Giubellini, V., Bottacini, F., and D. van
Sinderen. 2010. Analyses of bifidobacterial prophage-like sequences. Antonie van
Leeuwenhoek. 98(1):39-50 (IF: 1.964).
53. Ventura, M., Turroni F., Zomer A., Foroni E., Giubellini V., Canchaya C., Bottacini F.,
Claesson, M.J., Zhang, Z., Mantzourani, M., Mulas L., Ferrarini A., Delledonne M.,
Henrissat B., Coutinho, P., Oggioni M., Gupta R.S., Beighton D., Fitzgerald G.F., O’Toole,
P.W., and van Sinderen D.,. 2009 The Bifidobacterium dentium Bd1 genome sequence
reflects its genetic adaptation to the human oral cavity Plos Genetics 12: e1000785 (IF:8.7)
54. Zomer, A., Fernandez, M., Kearney, B., Fitzgerald, G.F., Ventura, M., van Sinderen, D.
2009. An interactive regulatory network controls stress response in Bifidobacterium breve
UCC2003. J Bacteriol. 191(22):7039-49. (IF: 3.993).
55. Ventura, M., F. Turroni, G.L. Mendez, E. Foroni, A. Zomer, S. Duranti, V. Giubellini, F.
Bottacini, P. Horvath, R. Barrangou, D.A. Sela, D.A. Mills and D. van Sinderen. 2009.
Comparative analyses of prophage-like elements present in bifidobacterial genomes. Appl.
Environ. Microbiol. 75:6929-6936 (IF: 3.778)
56. Turroni F, Marchesi, J.R., Foroni E, Gueimonde, M., Shanahan F, Margolles, A., van
Sinderen D, Ventura M. 2009. Microbiomic analysis of the bifidobacterial population in the
human distal gut. The ISME J. 3(6):745-51. (IF:5.029)
57. Turroni F, Foroni E, Pizzetti P, Giubellini V, Ribbera A, Merusi P, Cagnasso P, Bizzarri B,
De'angelis GL, Shanahan F, van Sinderen D, Ventura M. 2009. Exploring the diversity of
the bifidobacterial population in the human intestinal tract. Appl. Environ. Microbiol.
75(6):1534-45 (IF: 3.778)
58. Ventura, M., O'Flaherty S., Claesson M.J., Turroni F, Klaenhammer T. R., van Sinderen
D., and O'Toole P. W. 2009. Genome-scale analyses of health-promoting bacteria:
probiogenomics. Nature Microbiol. Rev 7(1):61-71 (IF: 14.959)
59. Ventura, M, Turroni, F., Canchaya, C., Vaughan, E.E., O’Toole, P.W., van Sinderen. D.
2009. Microbial diversity in the human intestine and novel insights from metagenomics.
Frontiers in Bioscience 14:3214-21 (IF: 3.60).
60. Turroni, F., van Sinderen. D., Ventura, M. 2009. Bifidobacteria: from ecology to genomics.
Frontiers in Bioscience 14:4673-84 (IF: 3.60).
61. Denou, E., Pridmore R.D., Ventura, M., Pittet, A.C., Zwahlen, M.C., Berger, B., Barretto,
C., Panoff, J.M., Brussow, H. 2008. The role of prophage for genome diversification within
a clonal lineage of Lactobacillus johnsonii. J. Bacteriol. 190(17):5806-13. (IF: 3.993).
62. Mayo, B., van Sinderen D., and Ventura M. 2008. Genome analysis of food grade lactic
acid-producing bacteria: from basics to applications. Current Genomics. 9(3):169-83.
(IF:0.98)
63. Turroni, F, Ribbera, A., Foroni, E., van Sinderen, D., and Ventura, M. 2008. Human gut
microbiota and bifidobacteria: from composition to functionality. Antonie van Leeuwenhoek
94(1):35-50 (IF: 1.964).
64. Ventura, M., and Turroni, F. 2008. How bifidobacterial genomics could help in
understanding probiotic-prebiotic functionality. Microbial Ecology in Health and Disease.
20:177-179.
65. Ventura M, Zomer A, Canchaya C, O'Connell-Motherway M, Kuipers O, Turroni F,
Ribbera A, Foroni E, Buist G, Wegmann U, Shearman C, Gasson MJ, Fitzgerald GF, Kok J,
van Sinderen D. 2007. Comparative analyses of prophage-like elements present in two
Lactococcus lactis strains. Appl. Environ. Microbiol. 73:7771-80 (IF: 3.778).
66. Ventura, M., Canchaya, C., Tauch. A, Chandra G., Chater, K., Fitzgerald, G.F., and van
Sinderen, D. 2007. Genomics of Actinobacteria: tracing the evolutionary history of an
ancient phylum. Microbiology and Molecular Biology Reviews 71: 495-548 (IF: 15.864).
67. Ventura, M., O’Connell-Motherway, M., Leahy, S., Fitzgerald, G.F., and van Sinderen D.
2007. From bacterial genome to functionality: case bifidobacteria. Int. J. Food Microbiol.
120;2-12 (IF:2.608).
68. Lindner, J., Canchya, C., Zhang, Z., Neviani, E., Fitzgerald, G.F., van Sinderen, D., and
Ventura, M.,. 2007 Exploiting Bifidobacterium genomes: the molecular basis of stress
response. Int. J. Food Microbiol.120:13-24 (IF:2.608).
69. Ventura, M., Canchaya, C., Zhang, Z., Fitzgerald, G.F., and D. van Sinderen. 2007.
Molecular characterization of the small heat shock-encoding gene, hsp20, from
Bifidobacterium breve UCC2003. Appl. Environ. Microbiol. 73:4695-703. (IF: 3.778).
70. Wegmann U, O'connell-Motherway M, Zomer A, Buist G, Shearman C, Canchaya C,
Ventura M, Goesmann A, Gasson MJ, Kuipers OP, van Sinderen D, Kok J. 2007. The
complete genome sequence of the lactic acid bacterial paradigm Lactococcus lactis subsp.
cremoris MG1363. J. Bacteriol. 189:3256-70. (IF: 3.993).
71. Ventura, M., Canchaya, C., Fitzgerald, G.F., Gupta, R.S., and van Sinderen D. 2007.
Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case
of bifidobacteria. Antonie van Leeuwenhoek, 91:351-372. (IF: 1.964).
72. Ventura, M., C. Canchaya, A. Del Casale, F. Dellaglio, E. Neviani, G. F. Fitzgerald and D.
van Sinderen. 2006. Analysis of bifidobacterial evolution using a multilocus approach. Int.
J. Syst. Evol. Microbiol. 30:734-59. (IF: 2.662).
73. Mahony, J., Deveau, H., McGrath, S., Ventura, M., Canchaya, C., Moineau, S., Fitzgerald,
G.F. and D. van Sinderen. 2006. Sequence and comparative analysis of lactococcal
bacteriophages jj50, 712 and P008: evolutionary insights into the 936 phage species. FEMS
Microbiol. Lett., 261:253-61. (IF: 2.068).
74. Ventura, M., C. Canchaya, V. Bernini, G.F. Fitzgerald and D. Van Sinderen. 2006. How
high G+C Gram-positive bacteria and in particular bifidobacteria cope with heat stress:
protein players and regulators. FEMS Microbiol. Rev. 30:734-759. (IF: 8.691).
75. Ventura, M., C. Canchaya, V. Bernini, E. Altermann, R. Barrangou, S. Mc Grath, M. J.
Claesson, Y. Li, S. Leahy, C. D. Walker, R. Zink, E. Neviani, J. Steele, J. Broadbent, T. R.
Klaenhammer, G. F. Fitzgerald, P. O’Toole, and D. van Sinderen. 2006. Comparative
genomics and transcriptional analysis of prophages identified in the genomes of
Lactobacillus gasseri, Lactobacillus salivarius and Lactobacillus casei. Appl. Environ.
Microbiol. 72:3131-3146. (IF: 3.778).
76. Ventura, M., C. Canchaya, V. Bernini, A. Del Casale, F. Dellaglio, E. Neviani, G. F.
Fitzgerald and D. van Sinderen. 2005. Genetic characterization of hrcA locus in
Bifidobacterium breve UCC 2003. Appl. Environ. Microbiol. 71:8998-9007. (IF: 3.778).
77. Ventura, M., Z. Ziding, J.G. Kenny, M. Cronin, C. Canchaya, G. F. Fitzgerald and D. van
Sinderen. 2005. The ClgR protein regulates the transcription of the clpP operon in
Bifidobacterium breve UCC 2003. J. Bacteriol. 187:8411-8426. (IF: 3.993).
78. Ventura, M., J.H. Lee, C. Canchaya, R. Zink, S. Leahy, J.A. Moreno- Munoz, M.
O’Connell-Motherway, D. Higgins, G. F. Fitzgerald, D. J. O’Sullivan and D. van Sinderen.
2005. Prophage-like elements in bifidobacteria: insights from genomics, transcription,
integration, distribution and phylogenetic analysis. Appl. Environ. Microbiol. 71:8692-8705.
(IF: 3.778).
79. Ventura, M, J.G. Kenny, Z. Zhang, G.F. Fitzgerald, and D. van Sinderen. 2005. The clpB
gene of Bifidobacterium breve UCC 2003: transcriptional analysis and first insights into
stress induction. Microbiology. 151:2861-2872. (IF: 3.139).
80. Ventura, M., G.F. Fitzgerald, and D. van Sinderen. 2005. Genetic and transcriptional
organization of the clpC locus in Bifidobacterium breve UCC 2003. Appl. Environ.
Microbiol. 71:6282-6291. (IF: 3.778).
81. Ventura, M., R. Zink, G.F. Fitzgerald, and D. van Sinderen. 2005. Gene structure and
transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and its
application in bifidobacterial tracing. Appl. Environ. Microbiol. 71:487-500. (IF: 3.778).
82. Ventura, M., C. Canchaya, R. Zink, G.F. Fitzgerald, and D. van Sinderen. 2004.
Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic,
transcriptional and phylogenetic analysis. Appl. Environ. Microbiol. 70:6197-209. (IF:
3.778).
83. Ventura, M., D. van Sinderen, G.F. Fitzgerald, and R. Zink. 2004. Insights into the
taxonomy, genetics and physiology of bifidobacteria. Antonie van Leeuwenhoek. 86:205223 (review). (IF: 1.964).
84. Ventura, M. and H. Brüssow. 2004 Temporal transcription map of the virulent
Streptococcus thermophilus bacteriophage Sfi19. Appl. Environ. Microbiol. 70:5041-5046.
(IF: 3.778).
85. Masco L., M. Ventura, R. Zink, G. Huys and J. Swings. 2004. Polyphasic taxonomic
analysis of Bifidobacterium animalis and Bifidobacterium lactis reveals relatedness at
subspecies level: reclassification of Bifidobacterium animalis as Bifidobacterium animalis
subsp. animalis comb. nov. and Bifidobacterium lactis as Bifidobacterium animalis subsp.
lactis comb. nov. Int. J. Syst. Evol. Microbiol. 54:1137-43. (IF: 2.662).
86. Ventura M., C. Canchaya, D. van Sinderen, G.F. Fitzgerald, and R. Zink. 2004.
Bifidobacterium lactis DSM 10140: identification of the atp (atpBEFHAGDC) operon, its
genetic structure, characterization and phylogenic analysis. Appl. Environ. Microbiol.
70:3110-3121. (IF: 3.778).
87. Ventura M., C. Canchaya, R.D. Pridmore, and H. Brüssow. 2004. The prophages of
Lactobacillus johnsonii NCC533: comparative genomics, transcription and microarray
analysis. Virology 320:229-242. (IF: 3.525).
88. Ventura M., and R. Zink. 2003. Comparative sequence analysis of the tuf and recA genes,
as well as RFLP of the ITS-sequences supplies additional tools to discriminate
Bifidobacterium lactis from Bifidobacterium animalis. Appl. Environ. Microbiol. 69:75177522. (IF: 3.778).
89. Ventura M., C. Canchaya, V. Meylan, T.R. Klaenhammer, and R. Zink. 2003. Analysis,
characterization and loci of the tuf genes in Lactobacillus and Bifidobacterium and their
direct application for species identification. Appl. Environ. Microbiol. 69:6908-6922. (IF:
3.778).
90. Ventura M., C. Canchaya, M. Kleerebezem, W.M. de Vos, R.J. Siezen, and H. Brüssow.
2003. The prophage sequences of Lactobacillus plantarum strain WCFS1. Virology.
316:245-255. (IF: 3.525).
91. Ventura M., C. Canchaya, D. Pridmore, and H. Brüssow. 2003. Integration and distribution
of Lactobacillus johnsonii prophages. J. Bacteriol. 185:4603-4608. (IF: 3.993).
92. Blatny J.M., M. Ventura, E.M. Rosenhaven, P.A. Risoen, M. Lunde, H. Brüssow, and I.F.
Nes. 2003. Transcriptional and regulatory studies of the genetic elements involved in the
lysogenic-lytic commitment and the identification of the Cro-like protein ORF76 of the
temperate lactococcal bacteriophage ΦLC3. Mol. Gen. Genomics. 269:487-498. (IF: 2.345).
93. Jankovic I., M. Ventura, V. Meylan, M. Rouvet, and R. Zink. 2003. Contribution of
Aggregation Promoting Factor (APF) to maintenance of cell shape in Lactobacillus gasseri
4B2. J. Bacteriol. 185:3288-3296. (IF: 3.993).
94. Ventura M., V. Meylan, and R. Zink. 2003. Identification and tracing of Bifidobacterium
species by Enterobacterial Repetitive Intergenic Consensus (ERIC) Sequences. Appl.
Environ. Microbiol. 69:4286-4301. (IF: 3.778).
95. Desiere F., S. Lucchini, C. Canchaya, M. Ventura & H. Brüssow. 2002. Comparative
genomics of phages and prophages in lactic acid bacteria. Antonie van Leeuwenhoek. 82:7391. (review). (IF: 1.964).
96. Ventura M., and R. Zink. 2002. Specific identification and molecular typing analysis of
Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis.
FEMS Microbiol. Lett. 217:141-154. (IF: 2.068).
97. Ventura M., and R. Zink. 2002. Rapid identification, differentiation, and proposed new
taxonomic classification of Bifidobacterium lactis. Appl. Environ. Microbiol. 68:6429-6434.
(IF: 3.778).
98. Ventura M., I. Jankovic, D.C. Walker, R.D. Pridmore, and R. Zink. 2002. Identification and
characterization of novel surface proteins in Lactobacillus johnsonii and Lactobacillus
gasseri. Appl. Environ. Microbiol. 68:6172-6181. (IF: 3.778).
99. Ventura M., A. Bruttin, C. Canchaya, and H. Brüssow. 2002. Transcription analysis of
Streptococcus thermophilus in the lysogenic state. Virology. 302:21-31. (IF: 3.525).
100.
Ventura M., S. Foley, A. Bruttin, C. Canchaya, and H. Brüssow. 2002.
Transcription mapping as a tool in phage genomics: the case of the temperate Streptococcus
thermophilus phage Sfi21. Virology. 296:62-76. (IF: 3.525).
101.
Ventura M., R. Reniero, and R. Zink. 2001. Specific identification and targeted
characterization of Bifidobacterium lactis from different environmental isolates by a
combined multiplex-PCR approach. Appl. Environ. Microbiol. 67:2760-2765. (IF: 3.778).
102.
Ventura M., M. Elli, R. Reniero, R. Zink. 2001. Molecular microbial analysis of
human intestinal Bifidobacterium isolates from different environments by the speciesspecific amplified ribosomal DNA restriction analysis (ARDRA). FEMS Microbiology
ecology. 36:113-121. (IF: 3.157).
103.
Ventura M., I. A. Casas, L. Morelli and M. L. Callegari. 2000. Rapid Amplified
Ribosomal DNA Restriction Analysis (ARDRA) identification of Lactobacillus spp.
isolated from fecal and vaginal samples. Systematic and Applied Microbiology. 23:504-509.
(IF: 2.037).
104.
Ventura M., L. Morelli and M. L. Callegari. 2000. S-layer gene as a molecular
marker for identification of Lactobacillus helveticus. FEMS Microbiology Letters 189:275279, 2000. (IF: 2.068).
105.
Ventura M., M.L. Callegari, L. Morelli. 1999. Surface layer variations affecting
phage adsorption on seven Lactobacillus helveticus strains. Annali di Microbiologia ed
Enzimologia 49:55-63, 1999. (IF: 0.078).
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