Online-Only Material for: Clopidogrel Pharmacokinetics and Pharmacodynamics Vary Widely Despite Exclusion or Control of Polymorphisms (CYP2C19, ABCB1, PON1), Noncompliance, Diet, Smoking, Co-medications (including Proton Pump Inhibitors), and Pre-existent Variability in Platelet Function Short Title: Clopidogrel Response Variability Andrew L. Frelinger III, PhD,*† Deepak L. Bhatt, MD, MPH,†‡ Ronald D. Lee, PhD,§ Darcy J. Mulford, PhD,§ Jingtao Wu, PhD,§ Sai Nudurupati, PhD,§ Anu Nigam, MS,* Michael Lampa, BS,* Julie K. Brooks, MS,* Marc R. Barnard, MS,* and Alan D. Michelson, MD*† *Center for Platelet Research Studies, Division of Hematology/Oncology, Boston Children’s Hospital, Dana-Farber Cancer Institute, Boston, MA, †Harvard Medical School, Boston, MA, ‡VA Boston Healthcare System, Brigham and Women's Hospital, Boston, MA, §Takeda Global Research & Development Center, Inc., Deerfield, IL Address for correspondence: Andrew L. Frelinger III, Ph.D., Associate Director, Center for Platelet Research Studies, Division of Hematology/Oncology, Boston Children’s Hospital, Karp 07212, 300 Longwood Avenue, Boston, MA 02115-5737. Telephone: 617-919-2539. Fax: 617730-4632. e-mail: Andrew.Frelinger@childrens.harvard.edu. Online-Only Material for Frelinger; Clopidogrel Response Variability eMethods: Enrollment Subjects were screened for enrollment between Days -28 and Day -2 using predefined inclusion and exclusion criteria to minimize subject risk and reduce interference with clopidogrel absorption or metabolism. Subjects provided written, informed consent prior to initiation of study procedures. Full enrollment criteria are described elsewhere.(1) Diet, Fluid, and Activity Control Subjects enrolled in this study (cohorts of 40 subjects at a time) were confined in a clinical research unit (Celerion, Tempe, AZ) for 10 consecutive days and nights during Periods 1 and 2. During the confinement period, subjects received standardized meals and an evening snack. On Day 9 of each of the two periods, when PK samples were collected, all subjects were served identical meals. All subjects could consume water ad libitum except for 1 hour prior to and postdrug administration. Study drug was administered with 240 mL of water. Subjects drank all of the water provided with the dose. During confinement, products containing Seville oranges (sour), grapefruit or grapefruit products (including juice) were prohibited and all subjects were limited to only standardized meals and snacks provided by the site. Breakfast was provided 1 hour post-dose except for Day 9 of both periods. On Day 9 of both periods, breakfast was not served. Lunch was served ~4 hours post-dose (after the 4-hour blood collection on Day 9 of both periods), dinner ~ 9 hours post-dose, and a snack ~12 hours post-dose (after the 12-hour blood collection on Day 9 of both periods). Breakfast, lunch, dinner and snacks were served at a consistent time on all other days. Subjects remained upright (sitting, standing, ambulatory) for 2 hours after dosing. Subjects refrained from strenuous exercise beginning upon confinement and Page 2 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability for the duration of their participation in the study. Genotype Analysis Blood, 6 mL, collected into plastic K2 EDTA Vacutainer™ tubes during the screening visit and stored frozen at -20°C, was used to determine CYP2C19 genotype. Genotyping of the *2, *3, *4, *5, *6, *7, *8, *9, *10 and *17 (C-806T) alleles of CYP2C19 was performed by Beckman Coulter Genomics (Morrisville, NC) by published procedures,(2-11) as previously described.(1) Only homozygous CYP2C19 extensive metabolizers (EM/EM, i.e., not carriers of CYP2C19 *2, *3, *4, *5, *6, *7, *8, *9, *10 and *17) were randomized into the study. Blood from randomized subjects was also analyzed for the presence of PON1 (rs662, G192R), CYP3A5 (*3 and *6) and ABCB1 (MDR1) C3435T allelic variants as described below. DNA isolation and purification DNA from blood samples provided was isolated and purified using the Qiagen QIAamp® DNA Blood Midi kit(2). All collection tubes had the assigned barcode label and were scanned into the database prior to transfer of the sample into a new collection tube to maintain the chain-ofcustody. PON1 rs662 allele: The PON1 rs662 allele is due to a guanine to adenine transition at nucleotide 575. This mutation results in a substitution of an arginine for a glutamine at position 192 of the protein. PCR products containing the rs662 region were amplified from clinical genomic DNA samples in parallel with negative (no template) controls, using specific primers. The PCR product was sequenced using M13F and M13R tailed PCR primers to the region of interest to provide forward and reverse sequencing reactions. The PCR reactions were purified using the Exo-SAP-IT® Clean Up kit(3). Sequencing reactions were assembled using the BigDye® Terminator Cycle Sequencing Kit v3.1.(4) Excess BigDye® Terminator was removed Page 3 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability using CENTRI-SEP™ purification columns.(5) The purified DNA products were run on the ABI3730xl Sequencing machine.(6) The raw sequence data from each run was imported into the Applied Biosystems Variant Reporter™ Software.(7) The reads from each region were aligned and the genotype for rs662 was called by the software. CYP3A5 Genotyping: CYP3A5*3 allele: The CYP3A5*3 mutation is due to an adenine to guanine transition at nucleotide 6986.(12) This mutation results in a splicing defect and also creates an AlwNl restriction site. A region around this site was PCR amplified and the PCR product was digested with AlwNl to produce banding patterns specific for the AlA (*3 non-carrier), AlG (*3 heterozygote), and GIG (*3/*3 homozygote) genotype. The PCR products were gel electrophoresed and photographed under ultraviolet light. CYP3A5*6 allele: The CYP3A5*6 mutation is due to a guanine to an adenine transition at nucleotide 14690.(13) This mutation results in a splicing defect and also destroys a Dde 1 restriction site. A region around this site was PCR amplified and the PCR product digested with Dde I to produce banding patterns specific for the GIG (*6 non-carrier), G/A (*6 heterozygote), and the AlA (*6/*6 homozygote) genotype. The PCR products were gel electrophoresed and photographed under ultraviolet light. ABCB1 Genotyping: ABCB1 C3435T allele: The ABCB1 C3435T allele is due to a cytosine to thymine transition at position 3435 in exon 26.(14) This allele does not cause an amino acid change in the protein. A 235 basepair fragment containing this polymorphism was PCR amplified, and the PCR product digested with Mbo I to produce banding patterns specific for the C/C, C/T, and T/T genotype. The PCR products were gel electrophoresed and photographed under ultraviolet light. Page 4 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability Clopidogrel Pharmacokinetics Blood (6 mL) for quantification of clopidogrel active metabolite (clopidogrelAM) concentration in plasma was collected into chilled ethylenediamine-tetraacetic acid tubes on dosing Day 9 at Pre-dose (no earlier than 30 min pre-dose) (0 hour prior to clopidogrel dosing) and 0.25, 0.5, 1, 1.5, 2, 3, 4, 5, 6, 7, 8, 12, and 24 hours post dose. Immediately following blood collection, 3’methoxyphenacyl bromide was added to chemically stabilize the clopidogrelAM. Plasma was stored frozen at -80°C until analysis. Concentrations of the H3/H4 pair of Z diastereomers of clopidogrelAM in human plasma was determined by Advion BioServices, Inc. (Ithaca, NY) using liquid chromatography/tandem mass spectrometry (LC-MS/MS, with a validated concentration range of 0.05 ng/mL to 50 ng/mL for clopidogrel, 0.1 ng/mL to 100 ng/mL for clopidogrel active metabolite. Concentrations below the lower limit of quantification were treated as zero in the summary statistics and calculation of the PK parameters. Pharmacokinetic parameters were derived using non-compartmental analysis methods determined from the concentration-time data for all evaluable subjects. Actual sampling times were used in all computations involving sampling times. The following pharmacokinetic parameters were calculated: the peak plasma concentration (Cmax), area under the plasma concentration-time curve from time 0 to the time of last quantifiable concentration (AUCt). Clopidogrel Pharmacodynamics VASP P2Y12 Assay. The VASP P2Y12 assay was performed according to the manufacturer’s instructions by the Center for Platelet Research Studies, Children’s Hospital Boston using citrate anticoagulated whole blood, shipped overnight at ambient temperature. Samples were treated with PGE1, and PGE1 plus ADP, fixed, permeabilized, and then reacted with fluorescein Page 5 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability isothiocyanate (FITC)-conjugated monoclonal antibody 16C2, specific for VASP-Ser239P, and phycoerythrin (PE)-conjugated monoclonal antibody specific for platelet surface CD61. Platelets were identified by flow cytometry in a FACSCalibur (Becton Dickinson) flow cytometer using CD61-PE fluorescence, forward- and side-light scatter and the level of VASP-Ser239P was determined by 16C2-FITC mean fluorescence intensity (MFI). The results were reported as platelet reactivity index (PRI) calculated as PRI = MFI(PGE1)-MFI(PGE1+ADP)/MFI(PGE1)×100. Light Transmission Aggregation. LTA was performed in BioData PAP8 instruments using platelet-rich plasma (PRP) prepared by centrifugation of citrated whole blood at 100 x g for 10 min and platelet-poor plasma (PPP) prepared by centrifugation of blood at 1500 x g for 10 min. Platelet counts were not adjusted prior to performing platelet aggregation. Results are reported as % aggregation, where PRP is set as 0% aggregation and PPP is set as 100% aggregation. Platelet aggregation was initiated by adding 1/10th volume ADP to achieve a final concentration of 5 or 20 µM ADP. All LTA assays were performed in duplicate and the results averaged. Results are reported as maximal percent aggregation (MPA). Accumetrics VerifyNow P2Y12 Assay. The VerifyNow P2Y12 assay was performed using VerifyNow model 85005-6 instruments and P2Y12 kit 85064 cartridges. The VerifyNow P2Y12 test cartridge measures platelet aggregation in separate channels in response to ADP and, as a reference measurement, in response to thrombin receptor activating peptide (TRAP). Results from the ADP channel are reported as platelet reactivity units (PRU). In addition, the VerifyNow reports % inhibition of P2Y12 function, calculated by comparing the PRU from the ADP channel to the PRU from the TRAP channel. Page 6 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability Online-Only Results: Clopidogrel pharmacodynamics after 9 days treatment with clopidogrel 75 mg varied widely (CVs 37%, 53%, 37%, and 32% for VASP PRI, VerifyNow PRU, MPA 5 µM ADP and MPA 20 µM ADP, respectively, Figure 1, panels C - F and Table 3 of the primary manuscript). To determine if the large observed variation in clopidogrel pharmacodynamic endpoints was the result of day-to-day subject and/or assay variation, assay results for each subject were compared across treatment days. eFigure 1 shows results for individual subjects pre-treatment, and on-treatment for 6, 7, 8, and 9 days. The selected subjects shown are representative of subjects in quartiles 1 – 4 at 6 days on-treatment. Subjects with a strong response (quartile 1) at 6 days on clopidogrel treatment showed a similar strong response at 7, 8, and 9 days ontreatment. Likewise, subjects with a weak response (quartile 4) at 6 days on clopidogrel showed a similar weak response at 7, 8, and 9 days on-treatment. The consistency of the responses in each assay across treatment days 6 – 9 was quantified by calculating intraclass correlation coefficients (ICCs) eTable 1. High ICC values (all greater than 80%) demonstrate very low within subject day-to-day variation, insufficient to account for the large overall variation in assay results observed. Online-Only References 1. Frelinger III AL, Lee RD, Mulford DJ, et al. A Randomized, 2-Period, Crossover Design Study to Assess the Effects of Dexlansoprazole, Lansoprazole, Esomeprazole and Omeprazole on the Steady-State Pharmacokinetics and Pharmacodynamics of Clopidogrel in Healthy Volunteers. 2012;59:1304-11. 2. QIAamp® DNA Blood Midi/Maxi kit handbook. January 2005. 3. ExoSAP-IT product numbers 78200/01/02/05/50, Publication P-78200B, Rev. 02/08. Page 7 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability 4. BigDye® Terminator Cycle Sequencing Kit v3.1, Publication 106PB0901, Rev. 10/02. 5. Princeton Separations CENTRI-SEP 96 plate or 8 strip protocol product number 79100519D/79- 100613C. 6. Applied Biosystems 3730/3730xl DNA Analyzers User Guide product number 4331468 Rev. D 01/07. 7. Applied Biosystems Variant Reporter User Guide product number 4376590 Rev. A 05/07. 8. De Morais SM, Wilkinson GR, Blaisdell J, Meyer UA, Nakamura K, Goldstein JA. Identification of a new genetic defect responsible for the polymorphism of (S)mephenytoin metabolism in Japanese. Mol Pharmacol 1994;46:594-8. 9. de Morais SMF, Wilkinson GR, Blaisdell J, Nakamura K, Meyer UA, Goldstein JA. The major genetic defect responsible for the polymorphism of S-mephenytoin metabolism in humans. J Biol Chem 1994;269:15419-22. 10. Ferguson RJ, De Morais SM, Benhamou S, et al. A new genetic defect in human CYP2C19: mutation of the initiation codon is responsible for poor metabolism of Smephenytoin. J Pharmacol Exp Ther 1998;284:356-61. 11. Sim SC, Risinger C, Dahl ML, et al. A common novel CYP2C19 gene variant causes ultrarapid drug metabolism relevant for the drug response to proton pump inhibitors and antidepressants. Clin Pharmacol Ther 2006;79:103-13. 12. Kuehl P, Zhang J, Lin Y, et al. Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression. 2001;27:38391. 13. Hoffmeyer S, Burk O, von Richter O, et al. Functional polymorphisms of the human multidrug-resistance gene: multiple sequence variations and correlation of one allele with P-glycoprotein expression and activity in vivo. Proc Natl Acad Sci U S A 2000;97:3473-8. Page 8 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability 14. Sakaeda T, Nakamura T, Okumura K. MDR1 genotype-related pharmacokinetics and pharmacodynamics. Biol. Pharm. Bull. 2002;25:1391-400. Online-Only Figure Legend eFigure 1. Day-to-day variation in on-treatment clopidogrel pharmacodynamic endpoints. Results shown are sequential values for individual subjects representative of quartiles at 6 days on-treatment. MPA: maximal platelet aggregation; Q1: quartile 1, Q2: quartile 2; Q3: quartile 3; Q4: quartile 4. Page 9 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability Online-Only Tables: eTable 1. Key enrollment criteria related to variability in clopidogrel pharmacokinetics and/or pharmacodynamics. Inclusion Exclusion Male or female age 18 – 55 years CYP2C19 EM/EM (extensive metabolizer) Healthy by history and physical examination Hematology, clinical chemistry and urinalysis within reference range Medication-free Urine drug screen negative for substances of abuse CYP2C19 *2, *3, *4, *5, *6, *7, *8, *9, *10 and *17 (poor, intermediate, or ultra-rapid metabolizer) Prescription medications within 4 weeks OTC medications within 2 weeks Smoking within 6 weeks Positive cotinine test Caffeine within 72 h Alcohol within 72 h Consumption of products containing Seville oranges (sour), grapefruit or grapefruit juice within 14 days Current or recent history of GI disease, malabsorption, reflux, GI bleeding Systolic BP >140 mm Hg or diastolic BP >90 mm Hg Positive test for HBsAg or anti-HCV Pregnant or nursing Abbreviations: BP, blood pressure; GI, gastrointestinal; OTC, over the counter. Page 10 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 2. ClopidogrelAM levels and platelet function pre-treatment and following 9 days treatment with clopidogrel 75 mg in a homogeneous population of normal subjects. Pre-Treatment N=156 (a) Mean ± SD CV On-Treatment (9 days) Mean ± SD CV p-value (b) ClopidogrelAM AUCt, ng-hr/mL --- 41.3 ± 13.96 34% - ClopidogrelAM Cmax, ng/mL --- 39.6 ± 15.93 40% - VASP PRI, % 87.0 ± 6.49 7% 44.0 ± 16.41 37% <0.0001 VerifyNow P2Y12, PRU 303.5 ± 55.0 18% 121.7 ± 64.14 53% <0.0001 MPA 5 µM ADP, % 77.9 ± 9.84 13% 31.7 ± 11.89 37% <0.0001 MPA 20 µM ADP, % 78.7 ± 8.31 11% 40.6 ± 12.88 32% <0.0001 a) n = 155 for clopidogrelAM AUCt and Cmax (unreliable pharmacokinetic results were obtained from 1 subject); n = 156 for all other assays. b) Paired t-test, pre-treatment vs. on-treatment. Abbreviations: ADP = adenosine diphosphate; CV = coefficient of variation; MPA = maximal platelet aggregation; PRI = platelet reactivity index; PRU = platelet reaction units; VASP = vasodilator-stimulated phosphoprotein. Page 11 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 3. Intraclass Correlation Coefficient (ICC) for assessment of the steady state of clopidogrel PD end points after multiple clopidogrel doses. Least squares means estimated from a linear mixed effect model with repeated measures. Day is a fixed factor in the model. LS = least squares; MPA = maximal platelet aggregation; PD = pharmacodynamic; PRI = platelet reactivity index; PRU = P2Y12 reaction units. On-treatment On-treatment On-treatment On-treatment 6 Days 7 Days 8 Days 9 Days LS Mean (SE) LS Mean (SE) LS Mean (SE) LS Mean (SE) ICC (%) VASP PRI (%) 46.0 (1.30) 44.5 (1.31) 42.9 (1.30) 44.0 (1.30) 80.2 MPA 5 µM ADP (%) 32.0 (1.06) 32.5 (1.06) 32.4 (1.06) 31.7 (1.05) 82.5 MPA 20 µM ADP (%) 42.2 (1.08) 41.2 (1.07) 40.2 (1.07) 40.6 (1.07) 87.3 VerifyNow PRU 116.1 (5.02) 108.9 (5.02) 110.7 (5.02) 121.7 (5.02) 93.0 PD End Point Page 12 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 4. ClopidogrelAM AUCt and Cmax in subjects grouped by polymorphisms in PON1, CYP3A5 or ABCB1. PON1 rs662 ClopidogrelAM AUCt, ng*hr/mL ClopidogrelAM Cmax, ng/mL Mean (SD, n) Mean (SD, n) A/A (Q/Q) Low activity 40.45 (12.787, 33) 40.32 (14.113, 33) A/G (Q/R) Intermediate activity 40.38 (11.123, 89) 38.08 (12.494, 89) G/G (R/R) High activity 44.54 (20.506, 33) 43.19 (23.942, 33) P-valuea 0.4217 0.5723 ClopidogrelAM AUCt, ng*hr/mL ClopidogrelAM Cmax, ng/mL Mean (SD, n) Mean (SD, n) CYP3A5 *3 *1/*1 High expression 44.01 (8.916, 9) 41.44 (8.439, 9) *1/*3 Intermediate expression 39.28 (11.013, 43) 38.12 (13.187, 43) *3/*3 Low expression 41.87 (15.344, 103) 40.13 (17.454, 103) P-valuea 0.1613 0.3197 ClopidogrelAM AUCt, ng*hr/mL ClopidogrelAM Cmax, ng/mL Mean (SD, n) Mean (SD, n) ABCB1 C3435T aP-values C/C High activity 42.28 (9.656, 43) 40.37 (12.4, 43) C/T Intermediate activity 40.99 (15.27, 77) 39.64 (17.431, 77) T/T Low activity 40.67 (15.644, 35) 38.77 (16.718, 35) P-valuea 0.4533 0.5484 shown are from ANOVA models using log-transformed values of clopidogrelAM AUCt and Cmax and which included factors for genotype, cohort, period, and treatment group. Page 13 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 5. Factors associated with clopidogrelAM pharmacokinetics in multivariable model. Independent predictor ClopidogrelAM AUCt ClopidogrelAM Cmax General Linear Model General Linear Model adjusted r2 = 0.1789 adjusted r2 = 0.1552 Squared Squared semipartial p-value semipartial ˆ 2) correlation ( (a) ˆ 2) correlation ( p-value Age (years) 0.0384 0.0082 0.0315 0.0179 Weight (kg) 0.0372 0.0092 0.0328 0.0157 (adjusted for cohort, period, and treatment group) a) P-values are from ANOVA models using log-transformed values of clopidogrelAM AUCt and Cmax. Page 14 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 6. VASP PRI in subjects grouped by polymorphisms in PON1, CYP3A5 or ABCB1. VASP PRI, % PON1 rs662 Mean (SD, n) A/A (Q/Q) Low activity 43.51 (17.703, 33) A/G (Q/R) Intermediate activity 44.88 (15.546, 90) G/G (R/R) High activity 42.10 (17.666, 33) P-valuea 0.8190 VASP PRI, % CYP3A5 *3 Mean (SD, n) *1/*1 High expression 34.32 (16.604, 9) *1/*3 Intermediate expression 44.96 (14.052, 43) *3/*3 Low expression 44.44 (17.157, 104) P-valuea 0.1402 VASP PRI, % ABCB1 C3435T aP-values Mean (SD, n) C/C High activity 42.14(16.445, 44) C/T Intermediate activity 44.18 (16.174, 77) T/T Low activity 45.95 (17.084, 35) P-valuea 0.5075 shown are from ANOVA models which included factors for genotype, cohort, period and treatment group. Page 15 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 7. Platelet aggregation in subjects grouped by polymorphisms in PON1, CYP3A5 or ABCB1. PON1 rs662 MPA 5 µM ADP, % MPA 20 µM ADP, % VerifyNow P2Y12, PRU VerifyNow P2Y12, % Inh. Mean (SD, n) Mean (SD, n) Mean (SD, n) Mean (SD, n) A/A (Q/Q) Low activity 32.05 (14.135, 33) 39.59 (13.988, 33) 118.12 (75.564, 33) 59.70 (23.174, 33) A/G (Q/R) Intermediate activity 31.52 (11.696, 90) 40.20 (12.369, 90) 120.24 (60.569, 90) 58.43 (18.188, 90) G/G (R/R) High activity 32.03 (10.206, 33) 42.64 (13.310, 33) 129.27 (62.748, 33) 56.94 (19.224, 33) p-valuea 0.9954 0.6400 0.8417 0.9620 MPA 5 µM ADP, % MPA 20 µM ADP, % VerifyNow P2Y12, PRU VerifyNow P2Y12, % Inh. Mean (SD, n) Mean (SD, n) Mean (SD, n) Mean (SD, n) CYP3A5 *3 *1/*1 High expression 29.83 (10.428, 9) 38.39 (9.236, 9) 99.89 (73.833, 9) 67.00 (21.604, 9) *1/*3 Intermediate expression 31.71 (10.812, 43) 40.57 (11.851, 43) 126.21 (66.704, 43) 57.49 (19.560, 43) *3/*3 Low expression 31.92 (12.501, 104) 40.78 (13.619, 104) 121.73 (62.479, 104) 58.01 (19.222, 104) p-valuea 0.5921 0.5656 0.5765 0.4656 MPA 5 µM ADP, % MPA 20 µM ADP, % VerifyNow P2Y12, PRU VerifyNow P2Y12, % Inh. Mean (SD, n) Mean (SD, n) Mean (SD, n) Mean (SD, n) ABCB1 C3435T C/C High activity 30.52 (12.062, 44) 38.64 (13.480, 44) 118.02 (63.659, 44) 59.05 (20.596, 44) C/T Intermediate activity 31.69 (10.620, 77) 41.34 (12.260, 77) 121.68 (64.832, 77) 58.77 (18.843, 77) T/T Low activity 33.39 (14.271, 35) 41.37 (13.571, 35) 126.40 (64.775, 35) 56.71 (19.721, 35) p-valuea 0.7806 0.7745 0.8557 0.8174 aP-values shown are from ANOVA models which included factors for genotype, cohort, period and treatment group. Inh. = inhibition. Page 16 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability eTable 8. Factors associated with on-treatment VerifyNow PRU and % inhibition and MPA to 5 and 20 µM ADP in multivariable models. VerifyNow PRU VerifyNow % Inhibition General Linear Model General Linear Model 2 adjusted r = 0.6500 adjusted r2 = 0.5738 Squared Squared semipartial Independent predictor P-value semipartial ˆ ) correlation ( (a) ˆ 2) correlation ( p-value 0.0874 <0.0001 0.1033 <0.0001 2 ClopidogrelAM AUCt ClopidogrelAM Cmax VASP PRI Hematocrit (%) Pre-treatment VerifyNow PRU or % Inhibition Independent predictor 0.0443 <0.0001 0.1373 <0.0001 0.0293 0.0005 0.1015 <0.0001 0.0235 0.0016 MPA 5 µM ADP MPA 20 µM ADP General Linear Model General Linear Model adjusted r2 = 0.3519 adjusted r2 = 0.4357 Squared Squared semipartial semipartial ˆ 2) correlation ( p-value ˆ 2) correlation ( p-value 0.2118 <0.0001 0.1086 <0.0001 0.0181 0.0277 ClopidogrelAM AUCt VASP PRI Hematocrit (%) 0.0548 0.0004 Gender Pre-treatment MPA to 5 or 20 µM ADP 0.0203 0.0297 0.0541 0.0002 0.0218 0.0159 a) P-values are from ANOVA models using log-transformed values of clopidogrelAM AUCt and Cmax. Abbreviations: see eTable 2. Page 17 of 18 Online-Only Material for Frelinger; Clopidogrel Response Variability Online-Only Figure: eFigure 1. Day-to-day variation in on-treatment clopidogrel pharmacodynamic end points. Results shown are sequential values for individual subjects representative of quartiles at 6 days on-treatment. MPA: maximal platelet aggregation; Q1: quartile 1, Q2: quartile 2; Q3: quartile 3; Q4: quartile 4. Page 18 of 18