CCP4 workshop onComputational Crystallography
February 18th -22th , 2008
Venue: Choksi Hall, Indian Institute of Science, Bangalore 560 012
Monday, 18 February, 2008
2:00 - 2:45 pm
Frank von Delft Crystallographic Data processing SGC, Oxford
techniques and strategies 1
Tea Break 2:45 -3:00 pm
3:00 - 3:45 pm
3:45 - 4:30 pm
Frank von Delft Crystallographic Data processing SGC, Oxford
techniques and strategies 2
Eleanor
Dodson,
University of
York
4:30 pm -5:15 pm
M. R. N.
Murthy, Indian
Institute of
Science
Tuesday February 19, 2005
2:00 - 2:45 pm
Paul Emsley,
Oxford
Tea Break 2:45pm - 3:00
University
pm
3:00-3:45 pm
Frank von
Delft,
SGC, Oxford
3:45 - 4:30 pm
Eleanor J.
Dodson,
University of
York
4:30 pm - 5:15 pm
Garib
Murshudov,
University of
York
Wednesday, 20 February 2008
9:00 - 9:45 am
Eugene
Krissenel,
University of
York
Data quality assessment
Pitfalls of auto-indexing
Introduction to ideal phasing
experiment
Complex phasing
Phase improvement
Basic introduction to Statistics and
Likelihood
Bioinformatics -Model selection:
Homology and folds
Tea Break 9:45am - 10:00
am
10:00- 10:45 pm
4:45 - 5:30 pm
Martin Winn
Garib
Murshudov,
University of
York
Thursday, 21 February, 2008
2:00 - 2:45 pm
Serge Cohen
Tea Break 2:45pm - 3:00
pm
3:00 - 3:45 pm
4:00 - 5:00 pm
(Public Lecture)
Paul Emsley,
University of
York
Guy Dodson,
University of
York
Friday, 22 February, 2008
2:00 - 2:45 pm
Garib
Murshudov,
University of
York
3:15 - 4:00 pm
Paul Emsley,
Oxford
University
4:30 - 5:15 pm
Eugene
Krissinel, EBI
Molecular Replacement
Refinement of macromolecular
Structures
Introduction to Arp/Warp
philosophy of model building
Validation of refinement
Functional interpretations from
Protein Structures
Ligand chemistry and description
Locating ligands in Electron Density
Maps
Bioinformatics analysis
This schedule is a rough indicator and will, in all likelihood, change from day to
day. We would update you on the schedule a day in advance. All are invited for
the lectures. Due to space constraints, participation in the computing and
tutorial sessions is limited to the selected participants.
Organizational details:
Monday-18.2.08
9.00am – 1.00 pm
1.00pm - 2.00pm
2.00pm – 5.30pm
5.30pm – 6.00pm
6.00pm – 8.30pm
8.30pm - 9.30 pm
DISC
Lunch (Choksi Hall Foyer)
Lecture Session (Choksi Hall)
Tea (Choksi Hall Foyer )
DISC
Dinner(Main guest house lawns)
Tuesday – 19.2.08
9.00am – 1.00 pm
1.00pm - 2.00pm
2.00pm – 5.30pm
5.30pm – 6.00pm
6.00pm – 8.30pm
8.30pm - 9.30 pm
DISC
Lunch (Choksi Hall Foyer)
Lecture Session (Choksi Hall)
Tea (Choksi Hall Foyer)
DISC
Dinner(Main guest house lawns)
Wednesday - 20.2.08
9.00am – 11.00am
11.30am - 12.30pm
12:30 pm – 1:15 pm
1.15pm - 3.30pm
4.00pm – 6.00pm
6.30pm - 8:30 pm
8.30pm - 9.30 pm
Lecture session (Choksi Hall Foyer)
DISC
Lunch (Choksi Hall Foyer)
DISC
Lecture session (Choksi Hall Foyer)
DISC
Dinner(Main guest house lawns)
Thursday – 21.2.08
9.00am – 1.00 pm
1.00pm - 2.00pm
2.00pm – 5.30pm
5.30pm – 6.00pm
6.00pm – 8.00pm
8.30pm - 10:00 pm
DISC
Lunch (Choksi Hall Foyer)
Lecture Session (Choksi Hall)
Tea (Choksi Hall Foyer)
DISC
Special Dinner(Main guest house lawns)
Friday – 22.2.08
9.00am - 1.00pm
1.00pm - 2.00pm
2.00pm - 5.30pm
8:00 pm -10 :00 pm
DISC
Lunch (Choksi Hall Foyer)
Lecture Session (Choksi Hall)
Dinner (Main guest house lawns)
Schedule for computing and tutorial sessions:
18 February
Morning 9:00 - 12:30 pm
The student participant (s) introduce themselves and their P.I.'s group. ( 5 minutes
max)
Martin Winn, Eleanor Dodson - Introduction by students and essentials of ccp4i.
Paul Emsley, Eugene - Introduction to COOT, structure analysis tools
Tutorial session 6:00 - 8:30 pm
19 February
Morning 9:00 - 12:30 pm Frank von Delft, Serge Cohen, B. Gopal
Data processing
Tutorial session 6:00 - 8:30 pm
20 February
11:30 am -12:30 am
1:15 am - 3:30 am Paul Emsley, Garib Murshudov, Eleanor Dodson - Phasing
techniques, exptl and MR
21 February
Morning 9:00 - 12:30 pm Paul Emsley and Garib Murshudov - Refinement, model
building
Tutorial session 6:00 - 8:30 pm - Gopal, Garib Murshudov
22 February
Morning 9:00 - 12:30 pm: Problem solving sessions based on requests
Tutorial session 6:00 - 8:30 pm