PROPOSAL: HUGHES SUMMER RESEARCH OPPORTUNITIES HEATHER RISSLER, VISITING ASSISTANT PROFESSOR OF BIOLOGY My primary research interest in photosynthesis is due to my appreciation for the variety of disciplines this field of research encompasses, beginning at the atomic level and extending to whole ecosystems. More specifically, I am interested in the balancing act that occurs between light harvesting and photoprotection and the evolutionary history of these processes in photosynthetic eukaryotes. The intricate balance between these two light-driven processes includes both immediate responses that are independent of changes in gene expression, such as adjustments in light harvesting antennae architecture and accumulation of photoprotective pigments, and longer-term responses that require changes in gene expression and cross talk between the nucleus, plastid, and mitochondria. My research goals encompass two lines of inquiry that investigate the balance between light harvesting and photoprotection. By developing an active research program, I endeavour to advance research in these areas and to provide a training platform for undergraduates who are interested in exploring research-based laboratory work or who desire preparation in specific techniques for their graduate studies. I am dedicated to providing a positive research experience for undergraduate students and I am particularly interested in working with students that are underrepresented in the sciences. Throughout my graduate and post-doctoral work, I worked consistently to promote science literacy through community outreach and collaborations with science education reform groups. I am experientially aware of the undergraduate research goals set forth by HHMI and support these goals in my research program. Several Carleton students (including Jessica Postlethwaite, Stephanie Contag, Jason Martin, and Joe Osmundson) have worked with me on independent research projects during Fall and Winter term, and I anticipate that two students will be doing independent research in my lab during Spring term. As a Visiting Professor, I do not have external funding to support student research this summer. In order to continue providing Carleton students with a stimulating research experience, I would like to request that two students be funded for summer research in my lab through the HHMI grant. The students will work on one of the following projects: Evolution of pigment binding capacity and plasticity in the LHC superfamily of proteins Genomic and EST sequencing efforts have provided a wealth of opportunities for examining the evolution of light harvesting antennae function. Elucidating the structure and function of diverse antennae proteins completes a critical step towards the development and implementation of artificial antennae for nanotechnology and biotechnology applications. Recombinant light-harvesting complex proteins (LHCs) from diverse photosynthetic eukaryotes can be generated using publicly available sequence data. My research blends traditional biochemical and biophysical approaches with molecular homology modeling studies in order to probe the impact of changes in amino acid sequence on pigment binding capacity and spectral tuning properties in LHCs from diverse photosynthetic eukaryotes. To further address the evolution of LHC function we will examine rapid, stress-induced changes in the macro-organization of light harvesting antennae from diverse photosynthetic organisms using traditional biochemical and biophysical analyses, including non-denaturing gel electrophoresis and confocal microscopy. Since antennae proteins serve as molecular markers for photosynthetic microbes, an additional component of this project involves the development of techniques that can be used in biomonitoring of ecosystem diversity. This project will provide an undergraduate research experience that includes training in molecular biology, environmental microbiology, bioinformatics, biochemistry, genomics, plant physiology, and biophysics. Interpreting intracellular signalling pathways in eukaryotes using Euglena gracilis as a model organism Progress is rapidly being made towards deciphering cross talk between organelle and nuclear genomes in higher plants and yeast. However, given that the plastid of E. gracilis arose from a secondary endosymbiotic event, I predict that such pathways may be quite different in this organism. Furthermore, since E. gracilis possesses a fully competent tetrapyrrole biosynthetic pathway in both the mitochondria and plastid, it provides an excellent system for teasing apart the potential role of chlorophyll intermediates, heme, and bioenergetic pathways in mediating intracellular signal transduction. Traditional studies using inhibitors that target potential signals for these pathways will be continued in an effort to characterize the mechanism of organelle-nuclear genome signalling in complex plastids. Specific genes have been identified in Arabidopsis that are important components of the chloroplast-nuclear signal transduction cascade. The technique of RNA interference (RNAi) will be used to reduce expression of homologues for these genes in E. gracilis in order to compare signalling pathways in plastids that arose from a primary versus secondary endosymbiotic event. This project will provide an undergraduate research experience that includes training in molecular genetics, cell biology, and stress physiology.