Novel Transposable Elements in Solanaceae: Evolutionary Relationships among Tnt1-related
Sequences in Wild Petunia Species
Plant Molecular Biology Reporter
Raquel A. Kriedt, Guilherme M.Q. Cruz, Sandro L. Bonatto and Loreta B. Freitas*
Laboratory of Molecular Evolution, Department of Genetics, Universidade Federal do Rio Grande
do Sul, Bento Gonçalves 9500, PoBox 15053, 91501-970, Porto Alegre, RS, Brazil; E-Mail:
loreta.freitas@ufrgs.br
Supplementary Table S4 Accession numbers for Nicotiana and Solanun species analysed in this
study.
Species Identification/ Isolate
Nicotiana plumbaginifolia
N. plu
plumb19
plumb20
plumb8
plumb16
plumb18
N. glauca
glau18
glau19
glau20
glau15
N. tabacum
tab12
tab10
tab8
tab9
tab15
tab18
tab19
tab20
N. debneyi
deb14
deb17
deb15
deb6
deb19
deb16
deb20
deb18
N. benthamiana
ben19
ben2
ben20
N. tomentosiformis
Accession Number
AJ228044.1
AJ228056.1
AJ228057.1
AJ228045.1
AJ228053.1
AJ228055.1
AJ228115.1
AJ228116.1
AJ228117.1
AJ228112.1
AJ228009.1
AJ228007.1
AJ228005.1
AJ228006.1
AJ228012.1
AJ228015.1
AJ228016.1
AJ228017.1
AJ228091.1
AJ228094.1
AJ228092.1
AJ228083.1
AJ228096.1
AJ228093.1
AJ228097.1
AJ228095.1
AJ228076.1
AJ228059.1
AJ228077.1
tom18
tom20
tom1
tom2
N. sylvestris
N. syl
syl20
syl19
syl1
Solanun peruvianum
Lp1
Lp11
Lp12
Lp9
Lp10
Lp37
S. habrochaites
Lh10
Lh15
Lh20
Lh22
Lh9
Lh19
Lh21
S. lycopersicon
Le1
Le4
Le5
Le9
S. pimpinellifolium
Lpp1
Lpp17
Lpp18
Lpp19
Lpp20
Lpp3
S. spegazzinii
spg30
spg31
spg28
S. sucrense
scr21
scr24
scr23
S. tarijense
AJ228135.1
AJ228137.1
AJ228118.1
AJ228119.1
AJ228035.1
AJ228018.1
AJ228036.1
AJ228018.1
EF602668.1
EF602678.1
EF602679.1
EF602676.1
EF602677.1
EF602726.1
EF602696.1
EF602702.1
EF602707.1
EF602709.1
EF602698.1
EF602706.1
EF602654.1
EF602650.1
EF602653.1
EF602654.1
EF602657.1
EF602630.1
EF602646.1
EF602647.1
EF602648.1
EF602630.1
EF602632.1
EF620735.1
EF620736.1
F620734.1
F620725.1
EF620727.1
EF620726.1
tar17
tar20
tar23
S. tuberosum
Tu19
Tu21
Tu23
S. vernei
ver2
ver3
ver11
S.commersonii
comm27
cmm29
cmm30
S. gourlayi
gou25
gou27
gou28
S. incamayoense
inc21
inc24
S. infundibuliforme
inf25
inf27
inf30
S. okadae
oka11
oka21
oka6
oka4
S. oplocense
opl25
opl26
S. acaule
acl19
acl20
acl21
S. leptophyes
Lph26
S. kurtzianum
ktz27
ktz25
ktz3
ktz11
EF620743.1
EF620744.1
EF620745.1
EF620757.1
EF620758.1
EF620759.1
EF620761.1
F620762.1
F620763.1
EF620605.1
EF620606.1
EF620607.1
EF620609.1
EF620610.1
EF620611.1
EF620636.1
EF620638.1
EF620646.1
EF620647.1
EF620648.1
EF620705.1
EF620707.1
EF620703.1
EF620702.1
EF620708.1
EF620709.1
EF620569.1
EF620572.1
EF620573.1
EF620671.1
EF620670.1
EF620669.1
EF620657.1
EF620662.1
ktz23
ktz16
S. doddsii
dds27
S. chacoense
chc25
S. sanctae-rosae
sat9
sat10
sat23
S. megistacrolobum
mga19
mga20
mga30
S. palustre
bre27
bre30
bre31
EF620668.1
F620665.1
EF620608.1
EF620604.1
EF620713.1
EF620714.1
EF620715.1
EF620681.1
EF620682.1
EF620683.1
EF620584.1
EF620585.1
EF620586.1