Supplementary Table 2. Putative genes at the S37 locus in the critical 108-kb DNA
fragment of NIL-S37
Predicted
Predicted Function
Gene
Position
(using
primer A16 as the
starting point 0kb)
ORF1
putative Gag-Pol polyprotein
1.23-6.71kb
ORF2
unknown protein
7.78-10.05kb
ORF3
putative copia LTR rider
10.32-13.37kb
ORF4
putative arginine/ornithine antiporter
14.07-18.16kb
ORF5
hypothetical protein
18.17-20.31kb
ORF6
putative extracellular ligand-gated ion channel
20.37-21.12kb
ORF7
putative reverse transcriptase (RNA-dependent DNA polymerase) domian
25.15-27.74kb
containing protein
ORF8
putative transposase family protein
30.57-31.97kb
ORF9
unknown protein
33.36-36.98kb
ORF10
putative alkaline phosphatase
37.21-38.78kb
ORF11
unknown protein similar to polyprotein
42.23-45.61kb
ORF12
putative nucleoporin Nup100/Nsp100
46.33-46.83kb
ORF13
putative nuclear GTP-binding protein NUG1
47.51-47.96kb
ORF14
unknown protein
48.33-48.83kb
ORF15
putative transcriptional repressor, LexA family
49.16-49.93kb
ORF16
unknown protein similar to Os01g0346600
50.30-51.47kb
ORF17
putative phosphatidate cytidylyltransferase
55.17-57.13kb
ORF18
putative Zinc knuckle family protein
58.71-62.45kb
ORF19
unknown protein
73.38-74.20kb
ORF20
hypothetical protein
77.20-78.00kb
ORF21
hypothetical protein
78.40-78.82kb
ORF22
putative integrase core domain containing protein
80.24-83.48kb
ORF23
putative zinc knuckle domain containing protein
83.76-85.89kb
ORF24
unknown protein
88.93-89.26kb
ORF25
hypothetical protein similar to transposon protein, CACTA, En/Spm sub-class
89.28-94.27kb
ORF26
unknown protein
98.26-99.67kb
ORF27
putative MscS Mechanosensitive ion channel
100.35-101.52kb
ORF28
unknown protein similar to Os01g0346600
103.14-104.36kb
ORF29
unknown protein similar to Os01g0346700
106.99-107.52kb