Supplementary table Eighty SSR markers used to detect homozygous
SSR loci ratio of wheat varieties
Locus
Marker Chromoso
type
me*
Xcwm6 EST5
SSR
1A
Numb PIC
er of value
alleles
Fragment
size
Marker
grade
10
0.66
220-260
1
(bp)
Xbarc8
0
Genom 1B
ic-SSR
6
0.61
97-125
1
Xcfd72
Genom 1D
ic-SSR
11
0.66
210-240
1
Xgwm2 Genom 2A
94
ic-SSR
16
0.74
67-105
1
Xgwm4 Genom 2B
29
ic-SSR
12
0.67
190-230
1
Xgwm2 Genom 2D
61
ic-SSR
11
0.67
160-210
1
Xgwm1 Genom 3A/1D
55
ic-SSR
9
0.74
120-160
1
Xswes1 EST85
SSR
4
0.58
180-190
1
10
0.71
120-150
1
Xgdm7
2
3B
Genom 3D
ic-SSR
Xgwm6 Genom 4A
10
ic-SSR
7
0.55
160-175
1
Xksum6 EST2
SSR
9
0.77
170-210
1
Genom 2B/4D
ic-SSR
12
0.76
110-160
1
Xgwm3 Genom 2A/5A
04
ic-SSR
16
0.80
200-230
1
Xgwm6 Genom 3A/5B/7D
7
ic-SSR
8
0.58
70-100
1
Xcfd29
Genom 5D
ic-SSR
14
0.82
160-190
1
Xgwm3 Genom 6A
34
ic-SSR
21
0.80
100-140
1
Xbarc1
98
Genom 6A /6B
ic-SSR
12
0.66
110-160
1
Xcfd76
Genom 6D
ic-SSR
14
0.79
140-170
1
Xcfa20
28
Genom 7A/7B
ic-SSR
7
0.49
230-260
1
Xgwm3 Genom 7B
33
ic-SSR
8
0.61
140-150
1
Xgwm4 Genom 7D
18
0.69
90-140
1
Xbarc9
1
4B
37
ic-SSR
Xbarc1
7
Genom 1A
ic-SSR
8
0.77
250-280
2
4
0.50
210-240
2
Genom 1A/1B/1D/ 8
ic-SSR 5B
0.70
240-280
2
Xcwm7 EST5
SSR
Xbarc2
40
1A
Xgwm2 Genom 1B
68
ic-SSR
19
0.82
230-250
2
Xcfd48
5
0.79
250-380
2
Genom 1B
ic-SSR
Xcwm1 EST70
SSR
1D
2
0.37
230-250
2
Xcwm3 EST34
SSR
2A
3
0.53
175-180
2
Xgwm4 Genom 2A
25
ic-SSR
9
0.72
120-141
2
Xwmc7 Genom 2B
64
ic-SSR
7
0.81
130-180
2
Xgwm5 Genom 2D
39
ic-SSR
13
0.83
130-170
2
Xksum7 EST3
SSR
3
0.55
160-180
2
2D
Xwmc5 Genom 3A
32
ic-SSR
8
0.59
160-200
2
Xbarc3
24
Genom 3A
ic-SSR
7
0.69
247-380
2
Xwmc3 Genom 3B
26
ic-SSR
8
0.76
170-210
2
Xgwm1 Genom 3D
61
ic-SSR
8
0.69
150-170
2
Xwmc4 Genom 4A
68
ic-SSR
12
0.84
130-170
2
Xgwm4 Genom 4B
95
ic-SSR
9
0.75
150-180
2
Xwmc4 Genom 4D
57
ic-SSR
4
0.58
160-170
2
Xcfa21
55
Genom 5A
ic-SSR
5
0.74
220-240
2
Xbarc2
1
Genom 5B/6D
ic-SSR
7
0.65
200-215
2
5B
2
0.36
160-200
2
Genom 5D
ic-SSR
7
0.66
150-160
2
Xgwm1 Genom 6A
8
0.70
180-235
2
Xcwm2 EST32
SSR
Xcfd8
69
ic-SSR
Xgwm5 Genom 6A/6B
70
ic-SSR
8
0.74
120-150
2
Xbarc3
54
Genom 6B
ic-SSR
7
0.75
180-260
2
Xgwm3 Genom 6D
25
ic-SSR
8
0.76
130-150
2
Xcfd49
Genom 6D
ic-SSR
12
0.82
160-240
2
Xwmc6 Genom 7A
03
ic-SSR
10
0.74
90-120
2
Xwmc7 Genom 7D
02
ic-SSR
8
0.80
150-190
2
Xksum1 Genom 1A
82
ic-SSR
4
0.53
170-200
3
Xcnl105 ESTSSR
1B
2
0.37
110-140
3
Xbarc1
74
Genom 1B
ic-SSR
7
0.76
160-230
3
Xgdm1
11
Genom 1D
ic-SSR
5
0.61
280-320
3
Xbarc1
68
Genom 2D
ic-SSR
4
0.56
150-180
3
Xwmc2 Genom 3A
64
ic-SSR
11
0.82
120-150
3
Xwmc4 Genom 3A
28
ic-SSR
8
0.72
230-260
3
Xbarc1
2
Genom 3A
ic-SSR
9
0.84
201-350
3
Xgwm5 Genom 3B
66
ic-SSR
7
0.76
120-140
3
Xwmc7 Genom 3B
77
ic-SSR
11
0.67
100-170
3
Xcfd15
2
7
0.73
290-350
3
Xgwm6 Genom 3D
45
ic-SSR
12
0.89
135-170
3
Xksum1 EST34
SSR
2
0.36
250-280
3
Genom 3D
ic-SSR
4A
Xbarc1
70
Genom 4AL
ic-SSR
13
0.80
110-150
3
Xbarc2
0
Genom 4B/7B
ic-SSR
6
0.74
180-210
3
Xwmc3 Genom 4B
49
ic-SSR
7
0.57
85-110
3
Xwmc2 Genom 4D
3
0.62
290-320
3
85
ic-SSR
Xwmc7 Genom 4D
20
ic-SSR
13
0.81
100-140
3
Xgwm1 Genom 5A
86
ic-SSR
7
0.75
132-180
3
Xcwem
44
5A/5B/5D
4
0.74
50-70
3
5B
2
0.38
160-175
3
Xgwm6 Genom 5A/6A
17
ic-SSR
11
0.76
100-180
3
Xwmc1 Genom 3B/6A
ic-SSR
5
0.47
130-160
3
Xgwm4 Genom 6A
59
ic-SSR
13
0.82
118-126
3
Xbarc1
96
Genom 6D
ic-SSR
3
0.42
130-217
3
Xcfd33
Genom 6D
ic-SSR
3
0.51
170-242
3
Xgwm4 Genom 6D
69
ic-SSR
9
0.80
150-180
3
Xswes2 EST09
SSR
4
0.63
280-300
3
ESTSSR
Xwes26 ESTSSR
7B
Xgwm3 Genom 7B
44
ic-SSR
8
0.61
130-150
3
Xgwm4 Genom 7D
4
ic-SSR
12
0.84
160-210
3