Supplement 2
advertisement
Supplementary Table 1. List of the Arabidopsis flowering time loci mined from the NCBI Gene database and used as bioinformatic targets in the present. Alias Gene record ID Gene description Arabidopsis locus AGL15 831224 agamous-like MADS-box protein AGL15 AT5G13790 AGL24 828556 MADS-box protein AGL24 AT4G24540 AGL6 819173 agamous-like MADS-box protein AGL6 AT2G45650 AGL8 836212 agamous-like MADS-box protein AGL8 AT5G60910 AP1 843244 Floral homeotic protein APETALA 1 AT1G69120 AP2 829845 Floral homeotic protein APETALA 2 AT4G36920 AP3 824601 Floral homeotic protein APETALA 3 AT3G54340 ATC 817302 protein centroradialis AT2G27550 ATJ3 823531 chaperone protein dnaJ 3 AT3G44110 ATMYB33 830497 myb domain protein 33 AT5G06100 BFT 836324 protein BROTHER of FT and TFL 1 AT5G62040 CAL 839172 transcription factor CAULIFLOWER AT1G26310 CCA1 819296 protein circadian clock associated 1 AT2G46830 CDF1 836364 Dof zinc finger protein DOF5.5 AT5G62430 CO 831441 zinc finger protein CONSTANS AT5G15840 COP1 817857 E3 ubiquitin-protein ligase COP1 AT2G32950 CRY1 826470 cryptochrome-1 AT4G08920 CRY2 839529 cryptochrome 2 AT1G04400 CUL1 825648 cullin 1 AT4G02570 EBS 828303 PHD finger and bromo-adjacent homology domain-containing protein AT4G22140 EFS 844066 histone-lysine N-methyltransferase SETD2 AT1G77300 ELF3 817134 protein EARLY FLOWERING 3 AT2G25930 ELF4 818596 EARLY FLOWERING 4; ELF4; T28M21.24; T28M21_24 AT2G40080 ELF5 836385 proline-rich family protein AT5G62640 ELF6 830303 jumonji/Zn finger-class transcription factor ELF6 AT5G04240 ELF7 844312 hydroxyproline-rich glycoprotein family protein AT1G79730 ELF8 815177 protein early flowering 8 AT2G06210 ESD4 827269 ubiquitin-like-specific protease ESD4 AT4G15880 FCA 827323 RNA binding / abscisic acid binding protein AT4G16280 FD 829744 protein FD AT4G35900 FDP 816286 basic region/leucine zipper motif 27-containing protein AT2G17770 FES1 817951 zinc finger CCCH domain-containing protein 27 AT2G33835 FIE 821622 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM AT3G20740 FIP1 815154 FRIGIDA interacting protein 1 AT2G06005 FKF1 843133 adagio protein 3 AT1G68050 FLC 830878 MADS-box protein FLOWERING LOCUS C AT5G10140 FLK 819619 RNA-binding KH domain-containing protein AT3G04610 FPA 818942 Flowering time control protein FPA AT2G43410 FPF1 832555 flowering promoting factor 1 AT5G24860 FRI 828044 FRIGIDA-like protein AT4G00650 FRL1 831493 protein FRIGIDA like 1 AT5G16320 FRL2 840070 protein FRIGIDA like 2 AT1G31814 FT 842859 protein FLOWERING LOCUS T AT1G65480 FVE 816471 histone-binding protein RBBP4 AT2G19520 FY 831191 Flowering time control protein FY AT5G13480 GA1 828182 Ent-copalyl diphosphate synthase AT4G02780 GAI 838057 DELLA protein GAI AT1G14920 GI 838883 gigantea protein (GI) AT1G22770 HOS1 818568 E3 ubiquitin-protein ligase HOS1 AT2G39810 HUA2 832379 Tudor/PWWP/MBT domain-containing protein AT5G23150 LD 827904 homeobox protein LUMINIDEPENDENS AT4G02560 LFY 836307 protein LEAFY AT5G61850 LHY 839341 protein late elongated hypocotyl AT1G01060 MFT 838390 protein MOTHER of FT and TF 1 AT1G18100 PFT1 839141 phytochrome and flowering time regulatory protein 1 AT1G25540 PHYA 839141 phytochrome A AT1G09570 PHYB 837483 phytochrome B AT2G18790 PHYC 816394 phytochrome C AT5G35840 PHYD 827319 phytochrome D AT4G16250 PHYE 827538 phytochrome E AT4G18130 PIF4 818903 transcription factor PIF4 AT2G43010 PIE1 820463 helicase SWR1 AT3G12810 RGA1 814686 DELLA protein RGA AT2G01570 RGL1 842953 DELLA protein RGL1 AT1G66350 RGL2 821251 DELLA protein RGL2 AT3G03450 SLY1 828522 F-box protein GID2 AT4G24210 SMZ 824664 AP2-like ethylene-responsive transcription factor SMZ AT3G54990 SNZ 818510 AP2-like ethylene-responsive transcription factor SNZ AT2G39250 SOC1 819174 MADS-box protein SOC1 AT2G45660 SPA1 819242 protein SUPPRESSOR OF PHYA-105 AT2G46350 SPT 829847 transcription factor SPATULA AT4G36930 SPY 820327 SPINDLY AT3G11540 SVP 816787 MADS-box protein SVP AT2G22540 SWN 828165 histone-lysine N-methyltransferase EZA1 AT4G02020 TEM1 839143 AP2/ERF and B3 domain-containing transcription repressor TEM1 AT1G25560 TEM2 843216 AP2-EREBP family, RAVE subfamily protein RAV2 AT1G68840 TFL1 831683 protein TERMINAL FLOWER 1 AT5G03840 TFL2 831635 chromo domain-containing protein LHP1 AT5G17690 TIC 821807 protein TIME FOR COFFEE AT3G22380 TOC1 836259 two-component response regulator-like APRR1 AT5G61380 TOE1 817403 TARGET OF EARLY ACTIVATION TAGGED 1 AT2G28550 TSF 827785 protein TWIN SISTER of FT AT4G20370 VEL1 829143 vernalization5/VIN3-like protein AT4G30200 VEL2 816404 vernalization5/VIN3-like protein AT2G18880 VEL3 816402 vernalization5/VIN3-like protein AT2G18870 VIN3 835844 protein VERNALIZATION INSENSITIVE 3 AT5G57380 VIP3 829105 WD repeat-containing protein 61 AT4G29830 VIP4 836236 leo1-like family protein AT5G61150 VRN1 821432 B3 domain-containing transcription factor VRN1 AT3G18990 VRN2 827392 polycomb group protein VERNALIZATION 2 AT4G16845 VRN5 822034 Fibronectin type III domain-containing protein AT3G24440 ZTL 835842 adagio protein 1 AT5G57360
