1 Supporting Information 2 3 Appendix S1. Diet data, parameters, and data inputs used in the bass bioenergetic model. 4 5 We used bioenergetic parameters sets from Shuter & Post (1990) for bass whose starting 6 weight was <50 g (i.e., age 0-2 year olds) and Whitledge et al. (2003) for age 3-4 bass, as 7 recommended by Whitledge et al. (2003) . 8 Solving the bioenergetic equation to determine seasonal consumption requires data on (1) 9 bass growth (i.e., bass weight at the beginning and end of the growing season), (2) bass energy 10 density, (3) bass diet, (4) the energy density of bass prey, (5) for reproductive bass (i.e., age 3 11 and older in the NFJDR), the loss of energy associated with spawning, and (6) the thermal 12 experience of the bass over the growth season. The derivation of these inputs is described below. 13 Growth for age 0-4 bass was determined from adult bass pectoral scales collected by 14 hook and line sampling primarily at the calibration site in years subsequent to the bass nest 15 survey in 2009 (n = 51 fish). For each bass we measured length-at-age from scale annuli and age 16 was back-calculated using the Fraser-Lee method (Devries & Frie 1996) . Bass length-at-age 17 was converted to weight-at-age (as required for bioenergetic modeling) using the length-weight 18 equation W= 0.0000116*TL3.02 (R2=0.99; n= 109; p<0.00001, min TL =22, max TL =298). We 19 assumed all annual growth occurred over our modeling window (fry = time from emergence to 20 October 31; adult = May 1 to October 31; see main paper for rationale). 21 We also determined spawning losses and age-at-spawning from the bass that were 22 collected for growth estimation. Spawning losses and age-at-spawning were assessed by 23 weighing bass gonadal tissue relative to whole body weight, and the age of sexually mature bass 24 was determined from scales. For age 2-4 bass, diets were determined by a combination of gastric 25 lavage in the field, or by freezing bass and dissecting their stomach contents in the lab. Prey 26 items in bass stomachs were identified to the lowest possible taxonomic unit, wet weighed, and 27 then grouped into 8 overall prey categories, based on similarity of prey energy density in each 28 group. This allowed us to calculate the percent of wet weight that each group contributed to the 29 overall bass diets. Diets were collected seasonally and represent May 1- July 1 (n=20 diets), July 30 1- August 1 (n=13), and August 1-October 31 (n=15). Diet results and energy densities are 31 shown in electronic supplementary material (table S1). Bass aged 0-1 were assumed to eat 32 primarily immature aquatic invertebrates (Jager et al. 1993, Dauwalter and Fisher 2008). Other 33 required bioenergetic inputs (i.e., YOY and adult bass energy density, prey energy density) were 34 derived from published estimates. All inputs and their sources are detailed in table S2. 35 The water temperatures experienced by bass over the 2009 growing season were derived 36 from data loggers deployed in the study streams. Data collection details are described in the 37 primary paper. 38 Table S1. Seasonal diets determined from bass 168-300 mm TL (avg = 242 mm; age 2-4). Bass were collected from the NFJDR/MFJDR confluence (RKM 0) to NFJDR RKM 25. Prey groups Prey Average wet weight contribution to diet per season 5/1-7/1 (n=20) 7/1-8/1 (n=13) 8/1-10/31 (n=15) Energy density (Joules/g) Source Aquatic invertebrate larvae, rigid body Coleoptera, Trichoptera 2.2% 1.1% 0.1% 4272 McCarthy et al. (2009) Aquatic invertebrate larvae, soft body Diptera 0.0% 0.0% 0.0% 2746 McCarthy et al. (2009) Aquatic nymph Diptera, Ephemeroptera, Insecta, 28.8% 14.2% 36.9% 3076 McCarthy et al. (2009) 21.4% 9.9% 7.9% 2789 McCarthy et al. (2009) Odonata, Plecoptera Aquatic other Annelida, Arthropoda, Gastropoda, Insecta, Nematoda Crayfish Pacifastacus leniusculus 0.0% 2.5% 11.3% 3318 McIntyre (2004) Fish Possible species indicted below1 46.3% 40.2% 26.7% 4696 Parrish et al. (2006) Terrestrial invertebrate adults Coleoptera, Collembola, Hemiptera, 0.0% 6.8% 11.2% 5250 McCarthy et al. (2009) 1.2% 25.3% 5.8% 4225 McCarthy et al. (2009) Hymenoptera, Orthoptera, Thysanoptera Winged insect Diptera, Ephemeroptera, Lepidoptera, Odonata, Plecoptera, Trichoptera 1 Juveniles of rainbow trout (Oncorhynchus mykiss ), Chinook salmon (Oncorhynchus tshawytscha ), northern pikeminnow (Ptychocheilus oregonensis ), largescale sucker (Catostomus macrocheilus), bridgelip sucker (Catostomus columbianus ). Juvenile and adult forms of longnose dace (Rhinichthys cataractae ), speckled dace (Rhinichthys osculus ), redside shiner (Richardsonius balteatus ), multiple species of sculpin (Cottus spp). Table S2. Bioenegetic model parameter set and model inputs for Age 0-4 bass. Bioenergetic model 1 1 Start weight (g) End weight (g) Predator energy Start total End total Total consumption Calibration at calibration site density length length 2 (mm) (mm) site p-value (g) (Joules/g)3 Prey energy density (Joules/g) Scale Spawning sample per season4 5/1-7/1 7/1-8/1 8/1-10/31 losses5 size6 Age parameters 0 Shuter & Post 1990 0.01 3.62 10 67 0.907 11.70 4186 3509 3509 3509 na 51 1 Shuter & Post 1990 3.62 18.50 67 116 0.874 61.50 4186 3509 3509 3509 na 46 2 Shuter & Post 1990 18.50 57.86 116 171 0.860 149.77 4186 3804 4173 3853 na 31 3 Whitledge et al. 2003 57.86 152.71 171 227 0.696 593.91 5175 3804 4173 3853 6% 21 4 Whitledge et al. 2003 152.71 221.06 227 257 0.453 632.46 5175 3804 4173 3853 6% 4 Per Whitledge et al. (2003) suggestion, we used the Shuter & Post (1990) smallmouth bass parameter set for bass < 50 g. When bass start weight exceeded 50 g we used the Whitlege et al. (2007) model. 2 The p-value was determined by running the bioenergetics model with known growth at the NFJDR RKM 0.2 calibration site and solving the mass-balance equation to 3 Hanson et al. (1997) predator energy density was used for Age 0-2 bass. Gravel et al. (2010) adult bass energy density was used for Age 3-4. determine bass consumption required to achieve the observed growth 4 Bass aged 0-1 were assumed to eat primarily immature aquatic invertebrates (Jager et al. 1993, Dauwalter and Fisher 2008). We used McCarthy et al. (2009) to estimate their energy density. Age 2-4 bass diets were seaonally determined from fish collected in the NFJDR (n=48). The prey energy density was determined by averaging the energy density of their prey, given their % wet weight contribution to the total diet. The details of these diets can be found in table S1. 5 Spawning losses for Age 3 and 4 fish were determined from fish collected in the NFJDR by weighing gonal mass relative to total body mass (n=18). 6 Scales were collected from adult bass and used to back-calculate length-at-age for Age 0-4 bass Supporting Information References Dauwalter, D.C. & Fisher, W.L. (2008) Ontogenetic and seasonal diet shifts of smallmouth bass in an Ozark stream. Journal of Freshwater Ecology, 23, 113-121. Devries, D.R. & Frie, R.V. (1996) Chapter 16: Determination of age and growth. Fisheries Techniques, Second Edition (eds B.R. Murphy & D.W. Willis), pp. 483-512. American Fisheries Society, Bethesda, Maryland. Gravel, M.A., Couture, P. & Cooke, S.J. (2010) Comparative energetics and physiology of parental care in smallmouth bass Micropterus dolomieu across a latitudinal gradient. Journal of Fish Biology, 76, 280-300. Hanson, P.C., Johnson, T.B., Schindler, D.E. & Kitchell, J.F. (1997) Fish bioenergetics 3.0 for Windows. Center for Limnology, University of Wisconsin-Madison and the University of Wisconsin Sea Grant Institute. McCarthy, S.G., Duda, J.J., Emlen, J.M., Hodgson, G.R. & Beauchamp, D.A. (2009) Linking habitat quality with trophic performance of steelhead along forest gradients in the South Fork Trinity River watershed, California. Transactions of the American Fisheries Society, 138, 506-521. McIntyre, J.K. (2004) Bioaccumulation of mercury and organochlorines in the food web of Lake Washington. Master of Science thesis. University of Washington, Seattle, Washington, USA. Parrish, J.K., Haapa-aho, K., Walker, W., Stratton, M., Walsh, J. & Ziel, H. (2006) Small-bodied and juvenile fishes of the mid-Columbia region including keys to diagnostic otoliths and cranial bones. Draft Version, March 2006. University of Washington, Seattle, WA. 137p. Shuter, B.J. & Post, J.R. (1990) Climate, population viability, and the zoogeography of temperate fishes. Transactions of the American Fisheries Society, 119, 314-336. Whitledge, G.W., Hayward, R.S. & Zweifel, R.D. (2003) Development and laboratory evaluation of a bioenergetics model for subadult and adult smallmouth bass. Transactions of the American Fisheries Society, 132, 316-325. Fig. S1. The total energy consumed and energy lost (summed over all days of the model) for age 1 bass (a), age 2 (b), and age 4 bass (c) across RKM in the NFJDR. If energy consumed exceeds energy losses this indicates scope for bass growth.