Sabina Alam, PhD Editor BMC Medicine Nicolas C. Nicolaides, MD, PhD Division of Endocrinology and Metabolism Clinical Research Center Biomedical Research Foundation of the Academy of Athens 4 Soranou tou Efessiou Street Athens, 11527, Greece Tel: +30 – 210 – 6597041 Fax: +30 – 210 – 6597545 E-mail: nnicolaides@bioacademy.gr December 19, 2013 Dear Professor Alam, Re: MS: 7190576501053833-Recent Advances in the Molecular Mechanisms Determining Tissue Sensitivity to Glucocorticoids: Clinical Implications Evangelia Charmandari, Nicolas C. Nicolaides, George P. Chrousos and Tomoshige Kino. BMC Medicine Thank you very much for your letter dated October 17, 2013 and the comments of the Reviewer. We have responded to these comments fully and have revised our manuscript according to the Reviewer’s suggestions. We hope that it is now suitable for publication in BMC Endocrine Disorders. The responses to the comments of the Editor-in-Chief and the Reviewers, and the revisions made are as follows: (Comments are in bold font style and our Responses in regular font style): Editor’s-in-Chief Comments: 1. The wider literature has not be fully discussed which will be important to do in order to provide a balanced review. Therefore, you should ensure you cite other groups that have researched GC sensitivity. This should particularly in the introduction. In response to your comment, we have enriched the part of background by citing important findings from other groups, since this was also suggested by the Reviewer (Please see our responses for the Reviewer’s comments 1-4). For this purpose, we have 1 added 19 new references and have expanded the length of our manuscript from 2323 to 2886 words. 2. State explicitly that you have focused on three aspects of GR signalling: circadian timing and GR mutations, and homologous downregulation, (rather than a general overview of recent advances in GR sensitivity). We have stated clearly that our review has focused particularly on three aspects of GR signaling: novel mutations, circadian rhythmicity and ligand-induced repression of hGR. This is explicitly stated in three parts of the manuscript: 1. Title (Page 1, lines 8-10), 2. Abstract (Page 3, lines 14-15) and 3. Background (Page 7, lines 11-13). 3. Remove any overlapping text with current literature. We have removed any overlapping parts of text with previously published reviews. Reviewer’s Comments: In this review, the authors discuss the most recent findings regarding the mechanisms which regulate the sensitivity of different tissues to glucocorticoids. They particularly focus on mutations of the hGR gene that can cause Primary Generalized Glucocorticoid Resistance, the effects of circadian rhythmicity on glucocorticoid sensitivity and ligand-induced repression of hGR expression. This review is well-written, informative and considerably improved compared with the previous version, limiting overlaps with previously published reviews. However there are some issues that must be taken care of in order to improve the quality of the review. We thank the Reviewer for his/her comments and we have revised our review according to his/her suggestions. Major compulsory revisions 1. Although the authors promise an account of the recent advances in the molecular mechanisms determining tissue sensitivity to glucocorticoids, they overlooked some important recent findings regarding components of GR-signaling such as the role of SGK-1 (Anacker et al., PNAS, 2013; Schwab et al., Cellular Physiology and Biochemistry, 2008), FKBP5 (Menke et al., Genes, Brain and Behavior, 2013; Hartmann et al., Neuropharmacology, 2012) or coregulator expression and recruitment (Bender et al., Molecular Endocrinology 2013; Lachize et al., PNAS, 2009). These findings indicate that these components may be equally important to GR-signaling as the mutations of GR and may have clinical implications as well. Focusing on certain factors dictating glucocorticoid sensitivity is not negative or undesirable per se, however, one would expect, at least, brief references to recent 2 findings regarding other players involved in GR-signaling. Perhaps something like this can be added in the Background section of the review. We agree with the Reviewer and we have added brief references to important findings for molecules involved, directly or indirectly, in GR signal transduction and associated pathologic conditions. Regarding SGK1 and FKBP5, please see page 6, line 24, and page 7, lines 1-3. As for coregulator expression and recruitment, please see page 5, lines 12-14 and 22-23. All these parts of the text have been added in the Background section, as suggested by the Reviewer. 2. Another component of GR-dependent signaling pathways is the membrane bound GR which modulates the non-genomic effects of glucocorticoids (Groeneweg et al., Journal of Endocrinology, 2011). We thank the Reviewer for his/her comment. We have added a brief part of text discussing the membrane GR-mediated non-genomic glucocorticoid actions (Page 6, lines 13-15). These findings are cited in Groeneweg et al., Journal of Endocrinology, 2011, as suggested by the Reviewer. 3. Apart from the mentioned mutations that decrease the sensitivity of GR, other splice variants exist which may lead to enhanced responses depending on the glucocorticoid used (e.g.; Baker et al, Shock, 2012; Tung et al., Shock, 2011) and the authors include one or two of them in table 3. Discussing this issue may increase the impact of this review, as no rationale is provided for choosing to discuss only mutations that decrease sensitivity to glucocorticoids. Where is the work on the GR polymorphisms?? The recently identified splice isoforms of GR are briefly reported in page 6, lines 21-22. Regarding GR polymorphisms (page 7, lines 3-6), we have added the references 20-24. 4. Glucocorticoid signaling may also be mediated by the other receptor of glucocorticoids, the mineralocorticoid receptor. The existence of two receptor system for glucocorticoid signaling must be at least acknowledged, as polymorphisms of MR may also play a role in glucocorticoid sensitivity (van Leeuwen et al., Psychoneuroendocrinology, 2011,) especially since GR and MR show overlapping expression patterns in many tissues and may also share common target genes. The involvement of MR in glucocorticoid signaling is reported in page 6, lines 15-18. We have also discussed briefly the important role of MR polymorphisms by citing van Leeuwen et al., Psychoneuroendocrinology, 2011 in page 7, lines 6-7, as suggested by the Reviewer. 3 5. The previous four points combined may point out that the title of the review may not be an accurate reflection of the content of the review, since a few of the mechanisms that determine tissue sensitivity to glucocorticoids have been completely ignored by the authors. We thank the Reviewer for his/her comment. We have revised the title of our review as: “Recent Advances in the Molecular Mechanisms Determining Tissue Sensitivity to Glucocorticoids: Novel Mutations, Circadian Rhythm and Ligand-induced Repression of the Human Glucocorticoid Receptor”. 6. The authors describe in detail the interactions between CLOCK and hGR. This begs the question whether anything is known about the interactions between CLOCK and mutated forms of GR. Also, regarding the interplay between tissue glucocorticoid sensitivity and circadian rhythmicity, it might be valid to briefly discuss the effects of pulsatility of glucocorticoid secretion on tissue sensitivity to glucocorticoids. To the best of our knowledge, any interactions between CLOCK and mutant forms of GR have not been investigated. Regarding the interplay between tissue glucocorticoid sensitivity and circadian rhythmicity, we have briefly discussed ultradian cortisol pulsatility in page 9 (lines 5-10). 7. The figures are of excellent quality, but it should be explicitly mentioned that they have been used in previous publications. We have prepared new figures (figures 1-3), which have not been published. Minor issues: 1. Pathologic natural hGR mutations causing Primary Generalized Glucocorticoid resistance or Chrousos syndrome, third paragraph: It may be beneficial to add references ?of the previously described differential effects of hGR mutations?? in the end of the paragraph. Amended as suggested by the Reviewer (Page 8, lines 22-23). 2. Ligand-induced down-regulation (repression) of hGR gene expression: Is it known how the histones and/or the DNA are modified at the promoter region of the hGR after treatment with glucocorticoids? To the best of our knowledge, it is not known how the histones and/or the DNA are modified at the promoter region of the hGR after treatment with glucocorticoids. 4 Please, find attached: The file containing the text, references and figure legends of the manuscript. The file containing the Figures. Please, do not hesitate to contact me if you require any further information. I look forward to hearing from you. With best wishes, Yours sincerely, Nicolas C. Nicolaides, MD, PhD Postdoctoral Fellow 5