Supplementary Table 9 ǀ Aneuploidy and prognosis in patients with bladder carcinoma Study (year of publication) Method of ploidy measurement Cancer type Number of patients Tumour stage Diploid (%) Follow-up duration End point P value Bollmann et al. (2009)S96 ICM- suspension UCC 22 pTa, pT1 54% 34 mo RFS NS Cai et al. (2006)S97 ICM-imprint TCB 29 pTa–pT4 45% 10 yrs RFS, Yamamoto et al. (2006)S98 Deliveliotis et al. (2005)S99 Ali-El-Dein et al. (2003)S100 LSC UCC 100 pTa–pT4 53% 42 mo PFS RFS in superficial TCB : P = 0.049 (U) RFS in pT1–pT4 TCB: NS RFS in pTa–pT4 (U): P = 0.0006 P = 0.033 (U) FCM TCB 66 T1–T4 39% 68 mo MS FCM-F TCB pTa: 38 pT1: 339 pTa–pT1 83% 58 mo RFS, PFS P <0.001 (U) P = 0.006; HR 72 (M) RFS: P = 0.002; HR 2.04 (M) PFS: P = 0.03; HR 2.06 (M) Bol et al. (2003)S101 Loughman et al. (2003)S102 ICM- suspension UCC Ta–T1 TCB 3 yrs RFS, PFS TTR PFS in Ta–T1 group: P = 0.0002; HR 10.2 (U) G2: P = 0.003 (U) Lavezzi et al. (2001)S103 ICM-section TCB 177 T1 Ta: 70% T1: 29% G1: 100% G2: 61% G3: 0% 56% 48 mo ICM-suspension Ta: 132 T1: 39 119 5 yrs OS NS (U) G1–G3 Abbreviations: FCM, flow cytometry; FCM-F, flow cytometry using fresh or frozen material; G, grade; HR, hazard ratio; ICM, image cytometry; LSC, laser scanning cytometry; M, on multivariate analysis; M+, distant metastasis; M0, no metastasis; mo, months; MS, median survival; NA, not applicable; NS, not significant; OS, overall survival; PFS, progression-free survival; RFS, recurrence-free survival; TCB, transitional cell carcinoma of bladder; TTR, time to recurrence; U, on univariate analysis; UCC, urothelial cell carcinoma; yrs, years. S96. S97. S98. S99. S100. S101. S102. S103. Bollmann, D. et al. Quantitative molecular grading of bladder tumours: a tool for objective assessment of the biological potential of urothelial neoplasias. Oncol.Rep. 21, 39-47 (2009). Cai, T. et al. Prognostic value of static cytometry in transitional cell carcinoma of the bladder: recurrence rate and survival in a group of patients at 10 years follow-up. Oncol.Rep. 15, 213219 (2006). Yamamoto, Y. et al. Biological characteristics in bladder cancer depend on the type of genetic instability. Clin. Cancer Res. 12, 2752-2758 (2006). Deliveliotis, C. et al. DNA ploidy as a prognostic factor in muscle invasive transitional cell carcinoma of the bladder. Urol.Res. 33, 39-43 (2005). Ali-El-Dein, B. et al. Superficial bladder tumours: analysis of prognostic factors and construction of a predictive index. BJU Int. 92, 393-399 (2003). Bol, M.G. et al. Proliferation markers and DNA content analysis in urinary bladder TaT1 urothelial cell carcinomas: identification of subgroups with low and high stage progression risks. J. Clin. Pathol. 56, 447-52 (2003). Loughman, N.T., Lin, B.P., Dent, O.F. & Newland, R.C. DNA ploidy of bladder cancer using bladder biopsy supernate specimens. Anal. Quant. Cytol. Histol. 25, 146-158 (2003). Lavezzi, A.M. et al. The role of different biomarkers (DNA, PCNA, apoptosis and karyotype) in prognostic evaluation of superficial transitional cell bladder carcinoma. Anticancer Res. 21, 1279-1284 (2001).