III. Cancer results from genetic changes that affect cell cycle control A. Mutations – changes to the nucleotide sequence that occur randomly or result from environmental factors a. When they affect growth factors, receptors, and intracellular signaling molecules they can affect the cell cycle and lead to cancer b. Some viruses turn cells cancerous with the implementation of their viral genome B. Types of genes associated with cancer a. Proto-oncogenes – genes that code for normal proteins that stimulate cell growth and division i. Ex. Ras – a G protein that relays signal from growth factor at the cell surface to a cascade of protein kinases b. Oncogenes – mutated genes that increase the amount of product or its activity and cause cancer i. Ex. Mutated Ras gene = hyperactive Ras protein and cell division even in the absence of growth factor c. Causes of the switch: i. Movement of DNA in the genome (transposition) ii. Amplification of the proto-oncogenes iii. Point mutations in control element or protooncogene d. Increasing activity of the cell cycle OR limiting it’s inhibition will cause uncontrolled division and growth i. Mutations in tumor suppressor genes allow less restricted division ii. Ex. P53 protein – when DNA is damaged it activates p53 protein which acts as a transcription factor for proteins that inhibit the cell cycle, are involved in DNA repair, or are involved in programmed cell death (apoptosis) iii. Mutated p53 prevents the production of these products for inhibition/repair/destruction THUS defective genes and cells are more likely to survive and proliferate. C. Multistep model for cancer development a. If cancer results from an accumulation of mutations, and mutations occur throughout our lifetime, then the longer we live, the more likely we are to develop cancer. IV. Eukaryotic genomes can have many noncoding DNA sequences in addition to genes A. Eukaryotic chromosomes have more non-coding DNA in comparison with prokaryotic chromosomes a. Some of this noncoding DNA falls within transcriptional units (Ex. Introns and regulatory sequences [like the promoter and terminator region] b. Some of this noncoding DNA falls between transcriptional units (Ex. Repetitive DNA sequences like transposable elements or simple sequence DNA) i. Transposable elements: gene segments that can move 1. Transposons – DNA moves and is inserted into the genome a. May be copied or cut, and inserted elsewhere 2. Retrotransposons – RNA transcript is translated to make reverse transcriptase which converts RNA transcript back to DNA which is inserted into the genome a. Employs the use of the reverse transcriptase enzyme (also seen in retroviruses) ii. Simple sequence DNA – short repeating “satellite” sequences which have a different density and play a role in the telomeres and centromeres B. Eukaryotic genomes also contain multigene families a. Repeating identical gene sequences produce high levels of RNA products required for cellular function Ex. rRNA b. May be comprised of non-identical but related genes i. Pseudogenes may also be present – similar to the functional genes in the multigene family but through mutation have a loss of function c. Indication of the evolution of genomes – how information can be split, changed, or moved in the genome over time through – we can interpret the evolution of genomes by comparing the nucleotide and amino acid sequences in order to determine relatedness i. Duplication – copies of genetic info are inserted into the genome – these copies end up in different places and diverge. As different gene segments accumulate changes, they can become very different from one another and the ancestral gene. ii. Rearrangement – exons may be rearranged creating new combinations of coding regions and the potential for new combinations iii. Transposable elements All of these can contribute to new sequence combinations which increase genetic variation and could potentially benefit the organisms.