1 Pharmacokinetics-pharmacodynamics analysis of bicyclic 4-nitroimidazole analogs in a 2 murine model of tuberculosis. 3 4 Suresh B. Lakshminarayana1#, Helena I. M. Boshoff2, Joseph Cherian1,a, Sindhu Ravindran1,b, 5 Anne Goh1, Jan Jiricek1, Mahesh Nanjundappa1, Amit Nayyar2,c, Meera Gurumurthy1,d, 6 Ramandeep Singh2, e, Thomas Dick1,d, Francesca Blasco1, Clifton E. Barry III2, Paul C. Ho3 7 and Ujjini H. Manjunatha1# 8 9 1 Novartis Institute for Tropical Diseases, Singapore, Singapore 10 2 Tuberculosis Research Section, Laboratory of Clinical Infectious Diseases, National Institute 11 of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, United 12 States of America 13 3 Department of Pharmacy, National University of Singapore, Singapore, Singapore 14 15 # 16 Suresh B. Lakshminarayana 17 Novartis Institute for Tropical Diseases, 10 Biopolis Road, #05-01 Chromos 18 Singapore, 138670 19 Email: suresh.b_lakshminarayana@novartis.com; Phone: +65 67222991 Corresponding Authors SBL & UHM 20 21 Ujjini H. Manjunatha 22 Novartis Institute for Tropical Diseases, 10 Biopolis Road, #05-01 Chromos, 23 Singapore, 138670 24 Email: manjunatha.ujjini@novartis.com ; Phone: +65 67222976 25 26 27 Key words: Tuberculosis, Pharmacokinetics, Pharmacodynamics, PA-824, Nitroimidazoles 28 29 Present address: 30 a 31 b 32 c 33 d 34 system, National University of Singapore, Singapore 35 e 36 Experimental Therapeutics Centre, Singapore National University Health System, Singapore AMRI Singapore Research Center, Singapore Department of Microbiology, Yong Loo Lin School of Medicine, National University Health Translational Health Science and Technology Institute, Gurgaon, Haryana, India 37 Table S1. Correlation of PK parameters with in vivo efficacy in mice for bicyclic 4-nitroimidazole analogs. 38 Compound ID PA-824 NI-622 NI-644 NI-135 NI-136 NI-182 NI-297 Spearman correlation with efficacy Dose (mg/kg) 25 25# 25# 25 25 25 25 Plasma PK Total concentration Cmax (µg/mL) AUC (µg.h/mL) 6 50.9 7.4 54.2 8.1 44.8 1.2 4.8 2 10.7 3.5 22.5 6 99.1 rs = -0.52 rs = 0.11 Lung PK Free concentration fCmax (µg/mL) fAUC (µg.h/mL) 0.6 5.1 0.2 1.6 0.8 4.5 0.1 0.4 0.3 1.8 0.3 2.0 0.1 1.8 rs = -0.58 rs = -0.16 Total concentration Cmax (µg/g) AUC (µg.h/g) 17.8 139.9 5.1 35.6 3.8 19 5.5 18.6 7.2 39.8 11.4 73.2 16.3 233.4 rs = 0.76 Mean log lung CFU reduction ± SEM 1.48 ± 0.09 0.89 ± 0.08 0.48 ± 0.03 1.48 ± 0.07 1.31 ± 0.06 1.23 ± 0.14 1.56 ± 0.11 rs = 0.52 39 40 PK parameters obtained from single dose PK data. Free concentrations in plasma were calculated using in vitro plasma protein binding. #PK 41 parameters derived from 50 mg/kg. rs = Spearman correlation coefficient. ∆ Mean log lung CFU reduction compared to untreated controls. Each 42 data represents mean value ± SEM from 5 animals. 43 44 45 46 Table S2. Correlation of PK-PD indices with in vivo efficacy in mice for bicyclic 4-nitroimidazole analogs. 47 Compound ID PA-824 NI-622 NI-644 NI-135 NI-136 NI-182 NI-297 Spearman correlation with efficacy Plasma PK-PD indices Dose (mg/kg) 25 25# 25# 25 25 25 25 Total concentration Cmax/MIC AUC/MIC %T>MIC 20 170 66 41 301 65 90 498 93 40 160 66 67 357 65 175 1125 66 300 4955 100 rs = -0.05 rs = -0.05 rs = 0.30 Lung PK-PD indices Free concentration fCmax/MIC fAUC/MIC fT>MIC 2.0 17 37 1.1 8.9 17 8.9 50 53 3.3 13.3 16 10 60 49 15 100 61 5.0 90 98 Total concentration Cmax/MIC AUC/MIC %T>MIC 59 466 96 28 198 64 42 211 84 183 620 95 240 1327 89 570 3660 75 815 11670 100 rs = -0.16 rs = 0.63 rs = 0.16 rs = 0.07 rs = 0.63 Mean log lung CFU reduction ± SEM 1.48 ± 0.09 0.89 ± 0.08 0.48 ± 0.03 1.48 ± 0.07 1.31 ± 0.06 1.23 ± 0.14 1.56 ± 0.11 rs = 0.88 48 49 PK-PD indices were calculated using PK parameters obtained from single dose PK data and in vitro potency. Free concentrations in plasma were 50 calculated using in vitro plasma protein binding. #PK parameters derived from 50 mg/kg. rs = Spearman correlation coefficient . ∆ Mean log lung 51 CFU reduction compared to untreated controls. Each data represents mean value ± SEM from 5 animals. 52 Figure S1: Plasma concentration time profiles of representative bicyclic 4-nitroimidazole 53 analogs following a single 25 mg/kg dose in mice 54 Mean Conc. +/- SD (ng/mL) 100000 PA-824 10000 NI-147 NI-135 1000 NI-297 NI-302 100 10 1 0 10 20 Time (h) 55 56 57 30