Research paper template 1 2 3 4 TYPE OR PASTE THE TITLE OF YOUR ARTICLE HERE: The title should accurately, clearly, and concisely reflect the emphasis and content of the paper. The title must be brief and grammatically correct. 5 Author Name 11, Author Name 22, Author Name 33 6 Address: 1 Institutional address 1; 2 Institutional address; 3 Institutional address 3 7 *Corresponding author: email address 8 9 10 11 12 13 14 ABSTRACT Instructions – please delete before submission. All submissions must have an abstract. Type or paste your abstract here. This should be no more than 250 words. The abstract should briefly state the problem or purpose of the research, indicate the theoretical or experimental plan used, summarize the principal findings, and point out the major conclusions. 15 16 17 DATA SUMMARY 18 19 20 21 22 23 24 25 Instructions – please delete before submission. Microbial Genomics is a mandatory open data journal. All authors are required to provide access to supporting data prior to submission. Each external data record should be cited in text (e.g. “Data resulting from Method X can be found in xxxxx.txt [Data Citation 1]”), and should also be listed in the data bibliography at the end of the document. 26 27 28 29 30 31 32 33 34 35 Please describe here all supporting external data including the DOI(s) and/or Accession Number(s), and the associated URL to access this (examples have been provided): 1. Strain data protocol has been deposited in Figshare; DOI: xx.xxxx/xxx (url – http://straindata.figshare.com) 2. Genome xyz has been deposited in GenBank; accession number: xxxxxx.x (url http://www.ncbi.nlm.nih.gov/nucgss/xxxxxx.x) I/We confirm all supporting data, code and protocols have been provided within the article or through supplementary data files. ☐ 36 37 38 IMPACT STATEMENT 39 40 41 42 43 44 Instructions – Please delete before submission. This lay summary of your article is mandatory and should be no more than 200 words, and should cover the following: a) provide a perspective of how this article adds to the literature in the field; b) breadth of interest/utility; and c) significance of output (incremental or step), in terms of relevance and being thought provoking. The Impact Statement will be published with your article if accepted. 45 46 47 INTRODUCTION 48 49 50 51 52 53 Instructions – Please delete before submission. This should state the objectives of the work, but should not contain a detailed summary of the results. Authors should not assume that all readers will know why an area is worth studying; they should briefly make this clear. Previous relevant work should be sufficiently cited but this should not constitute a full review. 54 55 56 METHODS 57 58 59 Instructions – Please delete before submission. Sufficient detail should be provided to allow the work to be repeated. 60 61 62 RESULTS 63 64 65 66 67 68 69 70 71 72 73 74 Instructions – Please delete before submission. There should be sufficient subheadings to make clear how the work was organized, what the key questions being addressed were, how one experiment led to another, and perhaps what conclusions were reached. A reader should gain a clear picture of the work from the subheadings. Reproducibility of results should be indicated. It should be stated how many times an experiment was repeated and whether means or representative results are shown. Variability should be indicated statistically wherever possible; when error terms are given, the measure of dispersion and the number of observations should be stated. Statistical techniques used must be specified, and where necessary they should be described fully or a reference given. If results are expressed as percentages, the absolute value corresponding to 100% should be stated. 75 76 77 DISCUSSION 78 79 80 81 82 83 Instructions – Please delete before submission. This should not recapitulate the results, and should not be too long. Excessive discussion of few facts often gives an impression of poor science. Subheadings should be used where appropriate, to highlight the points under discussion. It may be helpful to list the main conclusions at the end. A combined Results and Discussion section is encouraged where appropriate. 84 85 86 ACKNOWLEDGEMENTS 87 88 89 90 Instructions – please delete before submission. An Acknowledgements section is not compulsory but may be included. If required, please state the names of funding bodies and grant numbers in this section. Authors may also wish to acknowledge individuals who have contributed materials, expertise or time to the study who are not named as authors. 91 92 93 ABBREVIATIONS 94 95 96 Instructions – please delete before submission. Please include any non-standard abbreviations. 97 98 99 100 101 102 103 REFERENCES Instructions – please delete before submission. The reference list should be presented in Harvard style. Please review the Instructions for Authors for further information including referencing websites, and downloading the journal style using EndNote or Reference Manager. 104 105 106 The Reference List should be formatted in Harvard Style. For examples or more information please see the For Authors page. 107 108 109 110 111 112 Authors who use EndNote or Reference Manager can download the style for MGen by clicking on the links below: EndNote Reference Manager 113 DATA BIBLIOGRAPHY 114 115 116 117 Instructions – please delete before submission. The data bibliography should be presented in the following format: author, depository, DOI or Accession Number (YYYY). Please see the instructions for Authors for further information. Examples have been provided below: 118 1. Schmitz, R. J., Schultz, M. D. & Ecker, J. R. Gene Expression Omnibus GSE43857 (2013). 119 120 121 2. Smith, J. & Brown, D. FigShare http://dx.doi.org/10.6084/m9.figshare.NNNNN (2014). 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 FIGURES AND TABLES Instructions – please delete before submission. Research papers should have a maximum of 8 figures and tables. If you need to include more than this number, please include an explanation in your cover letter. Please list all figures and tables in order of appearance. Figures should not be used to present results that can be described by a brief statement in the text. File Size: 300dpi resolution for image files and 600dpi for line figures; Labelling criteria e.g. Figures must be referred to in the text as Fig. 1(a) not Fig. 1A or Figure 1(A) or as (Fig. 1a) not (Figure 1A). Multipart figures should be labelled (a), (b), etc., not (A), (B), etc. Figures should not be used to present results that can be described by a brief statement in the text. The points outlined for tables regarding comprehensibility, relative values and reproducibility also apply to figures and their legends. The inclusion of large amounts of tabular data in figures is discouraged and authors may be asked to move such data to the text or a separate table. Authors should be aware that after publication, tabulated data within figures are not accessible via online text searching. Tables should be broadly comprehensible without reference to the text, but it is not necessary to repeat detailed descriptions of methods, etc. The symbols * † ‡ § || ¶ # should be used for footnotes, rather than superscript letters or numbers. When results are expressed as percentages, the absolute value(s) corresponding to 100% must be stated. Statements of reproducibility should be included (see above). Tables should not be used to present results that can be described by a brief statement in the text. Our requirements for files intended for publication are different from those for files that will be converted to PDF by the Editorial Manager system as part of an initial submission, as set out in the Files for Publication section of these instructions. Please see the Instruction for Authors page for further details.