Chapter 4. Coevolution and Population Dynamics Biological Motivation The previous chapters considered the process of coevolution without touching on potential feedbacks between demography and evolution. For those systems where population sizes are regulated more by abiotic conditions than by interactions with other species, this may be a good approximation. Further support for this idea comes from studies showing that populations remain roughly constant in size, or fluctuate only stochastically, over decades or even centuries (REFS). In other cases, however, we know that species interactions drive demographic and evolutionary change, creating the possibility for interesting eco-evolutionary feedbacks in the coevolution (REFS). One of the best examples of such feedbacks is presented by the interactions between wild flax and flax rust we first studied in Chapter 2. As we already learned, this interaction is thought to involve a gene-for-gene interaction and thus has the potential for coevolution. What we left out when we introduced this system in Chapter 2, however, is the fact that population sizes of both rust and flax fluctuate substantially over time, with much of this demographic change driven by the interaction itself (REFS). Moreover, recent work has suggested that population fluctuations are tied to changes in gene frequencies (REFS), suggesting that in this system at least, we may need to study both demography and evolution simultaneously if we are to develop a complete understanding of the coevolutionary process. Our goal in this chapter is to revisit some of the models we introduced in Chapters 2 and 3 and explore when and how their predictions change when we allow species interactions to drive both demographic and evolutionary change. Key Questions: ο· ο· ο· Can population dynamics alter the dynamics and outcome of coevolution? Does coevolution influence population dynamics? Will coevolution ever drive a species to extinction? Building a model of coevolution between wild Flax and Flax-Rust Our general approach to integrating demography and coevolution into a model will be to first develop an ecological model of the interaction between flax and flax rust. Once we understand the basic behavior of this purely ecological model, we will add genetic variation to the interacting species and allow this genetic variation to influence key parameters of the ecological model. In this way we will allow coevolution and ecology to intermingle within our model. We will then use this eco-coevolutionary model to answer our key questions. Preliminaries — developing the ecological context for coevolution In order to begin, we must formulate a model that describes the ecology of the interaction between these species. Although the best way to do this might well be to develop a novel ecological model that captures the potentially important nuances of this system, we are going to take a much Mathematica Resources: http://www.webpages.uidaho.edu/~snuismer/Nuismer_Lab/the_theory_of_coevolution.htm easier (and hopefully more general) approach. Specifically, we are going to reach into the ecology book sitting by my desk and grab a well-worn and well-studied model of ecological interaction from its pages. Specifically, we are going to assume, for the sake of argument, that the ecology of the interaction between Flax and Flax Rust can be adequately described by the (slightly modified) Lotka-Volterra model of predator-prey interactions: πππ ππ‘ = πππ (1 − ππ )− π πππ ππ‘ = πΌπππ ππ − πππ . πΌπ½ππ ππ (1a) (1b) This system of ordinary differential equations describes how the population size of Flax (ππ ) and Flax Rust (ππ ) change over time in response to Flax population growth (r), density dependence in the Flax population (k), the probability that an encounter between Flax and Flax Rust leads to infection (πΌ), the rate of death or virulence of infected Flax individuals (π½), the rate at which successful rust infections churn out new rust spores (π), and the rates at which free living rust spores die off (d). Unlike the discrete time recursion equations we studied in the previous two chapters, these continuous time differential equations are most appropriate for systems lacking discrete divisions between generations, such that all events are always occurring at some rate (e.g., birth, death, interactions). Although many of the analytical tools we use to study such continuous time systems are identical to those we employed in the previous chapters (e.g., identifying equilibria), others differ slightly (e.g., stability analyses). An ancillary goal of this chapter is to introduce you to these subtle differences in analysis of continuous time systems. Now that we have specified a simple ecological model, what can we learn about the ecological dynamics of this interaction? Hopefully, we will be able to answer some simple questions such as when both species are likely to coexist, when one or the other will go extinct, and when we might expect fluctuations in population size like those well-documented in the Flax, Flax-Rust system. Although the most pleasing way to tackle these questions would be to solve the system of differential equations (1) directly, identifying such a solution is beyond the mathematical scope of this book. Fortunately, in this case, we can answer these questions and satisfy our curiosity by identifying equilibria and assessing their local stability. Even though we are now working with differential equations rather than the discrete difference equations we explored in earlier chapters, the procedure for identifying equilibria is identical: simply set the left hand side of the equations equal to zero and solve the resulting system of equations: 0 = πππ (1 − ππ )− π πΌπ½ππ ππ (2a) 0 = πΌπππ ππ − πππ . (2b) Using only relatively simple algebra it is possible to show that there are three possible equilibrium solutions: ππ = 0 πππ ππ = 0 (3a) 2 ππ = π πππ ππ = 0 π ππ = πΌπ πππ ππ = (3b) π(πΌππ−π) πΌ 2 πππ½ (3c) where the first represents extinction of both species, the second the extinction of the rust only, and the third coexistence of both species. But when, if ever, DOES THE COEXISTENCE EQ EXIST? Only if: πΌππ > π (4) will each of these equilibria occur? To answer this question, we must analyze the local stability of these equilibria. Just as we did for the system of discrete time equations describing changes in allele frequencies (chapter 2), the first step is to create a Jacobian Matrix. For the system of ordinary differential equations (2), this Jacobian Matrix is given by: π− π½=[ 2πππ π − πΌπ½ππ πΌπππ −πΌπ½ππ πΌπππ − π ]. (5) For the three ecological equilibria (3), the eigenvalues of this Jacobian are: π1 = π πππ π2 = −π (6a) π1 = −π πππ π2 = πΌππ − π (6b) π1 = −ππ+√π√π√ππ+4πΌπππ−4πΌ2 π 2 π 2 2πΌππ πππ π2 = −ππ−√π√π√ππ+4πΌπππ−4πΌ2 π 2 π 2 2πΌππ (6c) respectively. Thankfully, we are done with the math for a bit and can now sit back and think about what these results tell us about the ecological dynamics of our interaction. Let’s start with the simplest and most transparent results. First, the equilibrium where both species are extinct is never locally stable because one of its eigenvalues is always positive and real. This makes perfect biological sense since we would imagine that the Flax population would always increase from rarity in the absence of any infection by Flax Rust or intraspecific competition. Second, the equilibrium where only Flax is presence can be locally stable, but only if the rate at which the Flax rust dies, d, exceeds the rate at which it can be produced by infections of a Flax population at its carrying capacity k. So far so good, right? Unfortunately, now we need to spend a bit of time understanding when the third equilibrium is stable, allowing us to identify those conditions that allow Flax and Flax rust to potentially coexist. With those simple results in hand, we can move on to trying to figure out when the third equilibrium is likely to evolve, and what ecological dynamics should be like near this equilibrium. Right off the bat, we can draw one conclusion of biological importance: if the quantity under the more complicated root is negative, the eigenvalues will have an imaginary component and the species abundances will cycle inwards toward the equilibrium. The reason for this is that in continuous time systems, stability is determined by only the real part of the eigenvalue. If the quantity under the more complicated root is negative, the real part of both eigenvalues must be negative because both r and d are positive (Appendix 1; local stability analysis). What if instead, however, the quantity under the more 3 complicated root is positive? In this case, we know that Flax and Flax-Rust populations will not cycle, but whether the equilibrium is stable or not then depends on magnitude of the positive root relative to the product r×d. Together, these considerations and some simple algebra lead to biological predictions for the behavior of the interacting populations (Table 1). Table 1. Summary of stability conditions and ecological dynamics Condition Implications for stability Equilibrium (3c) unstable; π > ππΌπ Equilibrium (3b) stable Equilibrium (3c) stable; π < ππΌπ Equilibrium (3b) unstable Equilibrium (3c) stable and 4ππΌπ oscillatory; π < ππΌπ ( ) π + 4ππΌπ Equilibrium (3b) unstable FIGURE 1 ILLUSTRATES THESE DYNAMICAL REGIMES Biological consequences Extinction of Rust. Flax at carrying capacity Coexistence of Flax and Rust Coexistence of Flax and Rust. Transient cycles likely. We are now to a point where we can summarize the ecological dynamics of the interaction between Flax and Flax rust in the absence of any coevolution. FIGURE 1. In the next section, we integrate genetic variation for the ecological parameters of our model and investigate how the potential for coevolution impacts the ecology of the interaction. Integrating coevolution We assume as we did in Chapter 2, that the probability with which infection occurs in a random encounter between Flax and Flax-rust, πΌ, depends on the genotype of each individual at a single locus. Specifically, we will assume that Flax population has two possible alleles, R and r with abundances ππ,π and ππ,π , respectively, and the rust population has two possible alleles, V and v with abundances ππ,π and ππ,π£ , respectively. With these assumptions, we can use the ecological model (1) to specify a system of four ordinary differential equations describing how the abundance of each allele in each species changes over time: πππ,π ππ‘ πππ,π ππ‘ πππ,π ππ‘ πππ,π£ ππ‘ = πππ,π (1 − = πππ,π (1 − ππ,π +ππ,π π ππ,π +ππ,π π ) − πΌπ ,π π½ππ,π ππ,π − πΌπ ,π£ π½ππ,π ππ,π£ (7a) ) − πΌπ,π π½ππ,π ππ,π − πΌπ,π£ π½ππ,π ππ,π£ (7b) = πΌπ ,π πππ,π ππ,π + πΌπ,π πππ,π ππ,π − πππ,π (7c) = πΌπ ,π£ πππ,π ππ,π£ + πΌπ,π πππ,π ππ,π£ − πππ,π£ (7d) 4 where the term πΌπ,π indicates the probability of infection in an encounter between a flax with genotype i and a rust with genotype j. Analyzing the Model CHANGE OF VARIABLES 1) Define new variables: ππ = ππ,π + ππ,π (8a) ππ = ππ,π + ππ,π£ (8b) ππ = π ππ,π (8c) π,π +ππ,π ππ = ππ,π (8d) ππ,π +ππ,π£ 2) Apply chain rule: ππ πππ,π πππ,π πππ ππ‘ = ππ π πππ ππ‘ = ππ π πππ ππ‘ = ππ π πππ ππ‘ = ππ π πππ ππ‘ = πππ (1 − πππ ππ‘ = πππ ππ (πΌΜ ) − πππ (10b) πππ ππ‘ = −π½ππ ππ ππ (ππ (πΌπ ,π − πΌπ,π ) + ππ (πΌπ ,π£ − πΌπ,π£ )) (10c) πππ ππ‘ = πππ ππ ππ (ππ (πΌπ ,π − πΌπ ,π£ ) + ππ (πΌπ,π − πΌπ,π£ )) (10d) π,π ππ π,π ππ π,π ππ π,π ππ‘ π,π πππ,π ππ‘ πππ,π ππ‘ πππ,π π,π ππ + ππ π π,π£ ππ )− π (9b) ππ‘ ππ + ππ π (9a) ππ‘ πππ,π£ ππ + ππ π π,π£ πππ,π ππ‘ ππ + ππ π (9c) ππ‘ πππ,π£ (9d) ππ‘ π½ππ ππ (πΌΜ ) (10a) where πΌΜ = πΌπ ,π ππ ππ + πΌπ ,π£ ππ ππ + πΌπ,π ππ ππ + πΌπ,π£ ππ ππ and measures the average infectivity of the pathogen population. Re-written in this way, the biology hidden within the equations becomes transparent and we can immediately learn much about the interplay between ecology and evolution. 5 First and foremost, it appears that at least for this particular model of ecology, it is coevolution that drives ecology and not vice versa. Specifically, the only impact of ecology on coevolution is to modulate the rate of coevolutionary change. RELATE COEVOLUTION OF ALPHA BAR TO TABLE 1 CONDITIONS FOR THE SPECIFIC CASE OF THE GFG MODEL: πππ ππ‘ = πππ (1 − ππ )− π πππ ππ‘ = πππ ππ (πΌΜ ) − πππ (11b) πππ ππ‘ = π½ππ ππ ππ ππ (11c) πππ ππ‘ = πππ ππ ππ ππ (11d) π½ππ ππ (πΌΜ ) (11a) where for the GFG mode, πΌΜ = 1 − ππ ππ . OK, so the cool thing is this: look back at chapter two where we modeled coevolution without including any explicit ecology. How cool is that? Exact same equations but modified by the population size of the opposing species! This leads us to make a few logical guesses about the behavior of our coevolving system. Specifically, we would expect both the evolutionary and ecological dynamics to be identical to what they were in isolation. Although this logic seems compelling, let’s take a more formal approach to make sure our intuition is correct. SO COEVOLUTION HAS NO REAL IMPACT ON EQUILIBRIA OR STABILITY OF ECOLOGY. BUT WHAT ABOUT ITS TRANSIENT IMPACTS? SURELY THE SPREAD OF THE VIRULENT ALLELE MUST IMPACT DEMOGRAPHY? WE EXPLORE THIS NUMERICALLY. THIS IS A BIT OF A FARSE, BECAUSE I SET THE ORIGINAL ECOLOGICAL MODEL UP AS THE END STATE OF COEVOLUTION. THUS, THE RESULTS WERE pre-ordained. IF I STARTED THE MODEL WITH THE ORIGINAL ECOLOGICAL MODEL SET AT pa=pb=0 rather than pa=pb=1, I would see a large impact of coevolution… ALPHA BAR ALWAYS EVOLVES to ONE SO WE ALWAYS EVOLVE TO THE ORIGINAL ECOLOGICAL MODEL. BUT WHAT HAPPENS ALONG THE WAY? Answers to Key Questions: ο· Can coevolution shape population dynamics? Yes. ο· Do population dynamics alter the trajectory of coevolution? No. Population dynamics modulate only the rate of coevolution, not its trajectory. 6 ο· Can coevolution lead to extinction? No. New Questions Arising: . At the same time, however, our model analyses raise several important questions: ο· ο· Does the inclusion of costs amplify the interplay between coevolution and ecology? Are these results general or specific to gene for gene interactions? In the next three sections, we will develop generalizations of our simple model which allow us to answer these questions and gain further insight into the process of coevolution mediated by quantitative traits. Generalizations Generalization 1: Does the inclusion of costs amplify the interplay between coevolution and ecology? We know costs can strongly influence the dynamics of gene-for-gene coevolution, allowing for cycles. It also seems likely that costs could increase the scope for feedbacks between ecology and evolution because the benefits of resistance and virulence depend on the abundance of pathogens and hosts whereas the costs of resistance and virulence are static. Thus, we might expect interesting feedbacks to be present with costs that we did not identify when costs were absent. πππ,π ππ‘ πππ,π ππ‘ πππ,π ππ‘ πππ,π£ ππ‘ = ππ ππ,π (1 − = ππ ππ,π (1 − ππ,π +ππ,π π ππ,π +ππ,π π ) − πΌπ ,π π½ππ,π ππ,π − πΌπ ,π£ π½ππ,π ππ,π£ ) − πΌπ,π π½ππ,π ππ,π − πΌπ,π£ π½ππ,π ππ,π£ (12a) (12b) = πΌπ ,π πππ,π ππ,π + πΌπ,π πππ,π ππ,π − ππ ππ,π (12c) = πΌπ ,π£ πππ,π ππ,π£ + πΌπ,π πππ,π ππ,π£ − ππ£ ππ,π£ (12d) πππ ππ‘ = πΜ ππ (1 − ππ )− π πππ ππ‘ = πΌΜ πππ ππ − πΜ ππ πππ ππ‘ = ππ ππ (π½ππ ππ − ππ (1 − πππ ππ‘ = ππ ππ (πππ ππ − ππ ) πΌΜ π½ππ ππ (13a) (13b) ππ )) π (13c) (13d) 7 where πΌΜ = 1 − ππ ππ , πΜ = ππ ππ + ππ ππ , πΜ = ππ ππ + ππ£ ππ , ππ = ππ − ππ , ππ = ππ − ππ£ Generalization 2: Matching alleles interaction A return to Daphnia, pasteuria, and Matching alleles πππ ππ‘ = πππ (1 − ππ )− π πππ ππ‘ = πππ ππ (πΌΜ ) − πππ (14b) πππ ππ‘ = π½ππ ππ ππ (1 − 2ππ ) (14c) πππ ππ‘ = −πππ ππ ππ (1 − 2ππ ) (14d) π½ππ ππ (πΌΜ ) (14a) where πΌΜ = ππ ππ + ππ ππ HERE WE SEE THAT COEVOLUTION INFLUENCES ECOLOGY, BUT NOT VICE VERSA Generalization 3: Quantitative traits A return to cuckoos and their hosts and an introduction to adaptive dynamics πππ ππ‘ = πππ (1 − ππ )− π πππ ππ‘ = ππΌ(π₯, π¦)ππ ππ − πππ π½πΌ(π₯, π¦)ππ ππ (15a) (15b) Specify alpha: πππ ππ‘ = πππ (1 − ππ )− π πππ ππ‘ = ππΈπ₯π[−πΌ(π₯ − π¦)2 ]ππ ππ − πππ π½πΈπ₯π[−πΌ(π₯ − π¦)2 ]ππ ππ (16a) (16b) Find ecological equilibria: Μπ = 0 πππ π Μπ = 0 π (17a) 8 Μπ = π πππ π Μπ = 0 π Μπ = πβ π (π₯−π¦)2 π π (17b) Μπ = πππ π 2 2 β (π₯−π¦) π π(−πβ (π₯−π¦) π +ππ) ππ½π (17c) The interesting equilibrium, (17c), where both species are present, can exist only if d < k οΈο and even then, only when x=y. Define per capita fitness: 1 πππ π ππ‘ ππ = π ππ = 1 πππ ππ ππ‘ = π (1 − ππ ) π − π½πΈπ₯π[−πΌ(π₯ − π¦)2 ]ππ = ππΈπ₯π[−πΌ(π₯ − π¦)2 ]ππ − π (18a) (18b) Use these to calculate a “selection gradient” or is this invasion fitness? I don’t like calling it a selection gradient because it isn’t πππ ππ₯ = 2πΌπ½β −(π₯−π¦) πΌ (π₯ − π¦)ππ πππ ππ¦ = 2πΌπβ −(π₯−π¦) πΌ (π₯ − π¦)ππ 2 (19a) 2 (19b) And evaluate these at the ecological equilibrium of interest… Let’s focus on 17c where both species coexist… 2 2π(π₯−π¦)(−πβ (π₯−π¦) π +ππ)π ππ Μπ ,π Μπ ) πππ (π ππ₯ = Μπ ,π Μπ ) πππ (π ππ¦ = 2π(π₯ − π¦)π (20a) (20b) OK. So what can we learn from these invasion thingers? Maybe we could identify coevolutionary equilibra? π¦=π₯ (21) This equilibrium should look familiar, being identical to the equilibrium we identified for cuckoo and warbler in Chapter 3. WHAT ARE THE POPULATION DENSTIES AT THIS EQUILIBRIUM??? π {NX → π , NY → π(−π+ππ) } ππ½π (22) Are they stable? 9 {− ππ + √π√π√ππ + 4πππ − 4π 2 π 2 −ππ + √π√π√−4π 2 π 2 + π(π + 4ππ) , } 2ππ 2ππ It is VERY important that you make certain your equilibrium exists (and is stable) and continues to exist and be stable as you move through your adaptive dynamics analysis. All too often this part is ignored yielding dubious conclusions… Let’s focus on the first and ask whether it is CONVERGENT, or locally stable to normal people. To do this, we must perform a standard local stability analysis. Doing so reveals that the eigenvalues are: {0,2(π − π(π+ππ) )π} ππ (23) Stable if ππ > ππ (ππ−π) ππ (24) This shows that the matching equilibrium is stable anytime: ο¬>ο¨ where ο¬ = ο· d and ο¨ = (k οΈ-d)/(k οΈ) ο· r and the terms ο¬ and ο¨ measure the strength of selection acting on the parasite and host, respectively. Because the Ecological equilibrium upon which this solution is based exists iff d < k οΈο¬ο ο the right hand side is bounded on {0,r} guaranteeing stability anytime d>r??? The reason increasing death rates stabilize the equilibrium is because they correspond to this evolutionary equilibrium is stable iff π½ππ > πππ . Here too, you might notice some similarity to our results from Chapter 3 where we studied coevolution between cuckoo and warbler using a non-demographic quantitative genetic approach. Specifically, this result suggests that anytime the response to selection is greater for the cuckoo than the warbler, this matching egg coloration in the two species will be evolutionary stable. Under such conditions, the cuckoo has effectively won the evolutionary race. If in contrast, the warbler has the greater response to selection, this matching equilibrium is unstable. Finally, because it is rather an obsession of practicioners of adaptive dynamics, we will evaluate whether or not the matching equilibrium represents a “branching point”. Although almost invariably portrayed as an indication of incipient speciation, branching points are actually nothing more than locally stable evolutionary equilibria characterized by a pattern of disruptive selection. Not surprisingly then, the way in which they can be identified is by taking the second derivative of Equation (X) with respect to the trait and evaluating at the eco-evo equilibrium. Μπ ,π Μπ ) π2 ππ (π ππ₯ 2 =− Μπ ,π Μπ ) π2 ππ (π 2 ππ¦ = 2ππ(π−ππ)π ππ 2 (25a) 2ππ(π−ππ)π ππ½π (25b) 10 Since we know the ecological equilibrium where both species coexist exists only when d < k οΈο¬ο ο we can immediately infer that the sign of (Xa) is positive and the sign of (Xb) negative implying that the host species experiences disruptive selection whereas the parasite species experiences stabilizing selection. Here too, these results should seem familiar. The reason for this familiarity is that our previous analysis of cuckoo-warbler coevolution also demonstrated disruptive selection acting on warblers but stabilizing selection acting on cuckoos. In light of this result indicating the matching equilibrium is a “branching point” for the warbler, do we expect speciation to occur? The answer here is almost surely, NO. Although for a clonal species divergence into two lineages would be expected, for a sexual species like our warbler many additional hurdles must be overcome for speciation to occur. The primary reason for this is recombination. Unless assortative mating by phenotype is present within the population and already quite strong, mating between egg color morphs in each generation will allow recombination to erode linkage disequilbirum and continually homogenize egg-coloration. A more realistic expectation at this equilibrium is that, all else being equal, the warbler population should have somewhat greater phenotypic variation than should the cuckoo population (REFS). Conclusions and Synthesisο 11 References Figure Legends 12