Supplementary Information for Graphene nanopore field effect transistors Wanzhi Qiu, and Efstratios Skafidas S1. GNP structures for evaluating the effect of pore length Figs. S1 – S3 show the structures of optimized passivated GNPs with three pore lengths, where the carbon and hydrogen atoms are colored silver and white, respectively. The geometry optimization was achieved by relaxing the atom coordinates so that the forces on individual atoms are minimized to be smaller than 0.05 eV/Å, using the DFT implementation of the commercial package Atomistix ToolKit (ATK) from QuantumWise. Fixed GNP parameters are M = 14 (i.e., ribbon length L = 5.8 nm), N = 17 (i.e., ribbon width W = 2.0 nm), Np = 7 (i.e., pore width Wp = 0.7 nm). FIG. S1. Structure of GNP with ribbon length L = 5.8 nm, ribbon width W = 2.0 nm, pore width Wp = 0.7 nm, and pore length Lp = 1.1 nm. 1 FIG. S2. Structure of GNP with ribbon length L = 5.8 nm, ribbon width W = 2.0 nm, pore width Wp = 0.7 nm, and pore length Lp = 1.6 nm. FIG. S3. Structure of GNP with ribbon length L = 5.8 nm, ribbon width W = 2.0 nm, pore width Wp = 0.7 nm, and pore length Lp = 2.0 nm. 2 S2. Structures and transmission spectra for evaluating ribbon width effect Figs. S5 – S6 show the structures of optimized passivated GNPs, where the carbon and hydrogen atoms are colored silver and white, respectively. The geometry optimization was achieved by relaxing the atom coordinates so that the forces on individual atoms are minimized to be smaller than 0.05 eV/Å, using the DFT implementation of the commercial package Atomistix ToolKit (ATK) from QuantumWise. Fixed GNP parameters are M = 14 (i.e., ribbon length L = 5.8 nm), Mp = 4 (i.e., pore length Lp = 1.6 nm), Np = 7 (i.e., pore width Wp = 0.7 nm). FIG. S4. Structure of GNP with ribbon length L = 5.8 nm, pore length Lp = 1.6 nm, pore width Wp = 0.7 nm, and ribbon width W = 3.4 nm. 3 FIG. S5. Structure of GNP with ribbon length L = 5.8 nm, pore length Lp = 1.6 nm, pore width Wp = 0.7 nm, and ribbon width W = 4.9 nm. 4 FIG. S6. Transmission spectra of the GNPs with different ribbon widths. The structures of the GNPs are shown in Figs. S2, S5 and S6, respectively. N = 17, 29 and 41 correspond to ribbon widths W = 2.0 nm, 3.4 nm and 4.9 nm, respectively. S3. Structures and transmission spectra for evaluating pore width effect Figs. S8 – S9 show the structures of optimized passivated GNPs, where the carbon and hydrogen atoms are colored silver and white, respectively. The geometry optimization was achieved by relaxing the atom coordinates so that the forces on individual atoms are minimized to be smaller than 0.05 eV/Å, using the DFT implementation of the commercial package Atomistix ToolKit (ATK) from QuantumWise. Fixed GNP parameters are M = 14 (i.e., ribbon length L = 5.8 nm), N = 41 (i.e., ribbon width W = 4.9 nm), Mp = 4 (i.e., pore length Lp = 1.6 nm). 5 FIG. S7. Structure of GNP with ribbon length L = 5.8 nm, ribbon width W = 4.9 nm, pore length Lp = 1.6 nm, and pore width Wp = 2.2 nm. 6 FIG. S8. Structure of GNP with ribbon length L = 5.8 nm, ribbon width W = 4.9 nm, pore length Lp = 1.6 nm, and pore width Wp = 3.7 nm. 7 FIG. S9. Transmission spectra of the GNPs with different pore widths. The structures of the GNPs are shown in Figs. S6, S8 and S9, respectively. Np = 7, 19 and 31 correspond to pore width Wp = 0.7 nm, 2.2 nm and 3.7 nm, respectively. S4. Structures and transmission spectra of GNPs with vacancy defects FIG. S10. Structure of GNP_D1 that is created by introducing a vacancy defect on the left pore-edge of the structure shown in FIG. S1. 8 FIG. S11. Structure of GNP_D2 that is created by introducing vacancy defects on the top and bottom pore-edges of the structure shown in FIG. S1. FIG. S12. Structure of GNP_D3 that is created by drilling a circular pore in an armchair nano- ribbon of width ~2.0 nm. 9 FIG. S13. Transmission spectra of the perfect pore-edge GNP_PER (shown in FIG. 1) and GNPs with edge defects (shown in FIGs S10 – S12). 10