MASTER COPY 10/18/10 1 American Society of Veterinary Clinical Pathology (ASVCP) 2 Quality Assurance and Laboratory Standards Committee (QALS) 3 Guidelines for the Determination of Reference Intervals 4 in Veterinary Species and other related topics 5 Friedrichs K, Harr, KE, Freeman K, Szladovits B, Walton R, Barnhart K, Blanco J 6 7 Grasbeck and Saris introduced the concept of population-based reference values in 1969 8 to describe the variation in blood analyte concentrations in well characterized groups of 9 healthy individuals (Grasbeck, 1969). Reference values are typically reported as 10 reference intervals (RI) comprising 95% of the healthy population. Since their 11 introduction, population-based RI have become one of the most commonly used 12 laboratory tools employed in the clinical decision-making process (Horn and Pesce, 2005, 13 Chapter 1, page 1-2). Although use of population-based RI is universally accepted, the 14 optimal method for their derivation is frequently debated and is a recurring topic in the 15 clinical laboratory literature. 16 17 The standard for production of human population-based RI was commissioned by the 18 International Federation of Clinical Chemistry (IFCC) in 1970. The Expert Panel on the 19 Theory of Reference Values (EPTRV) authored a 6-part series on the production of 20 reference values, which was adopted by several professional organizations including the 21 Clinical and Laboratory Standards Institute (CLSI).(Solberg 1987, PetitClerc 1987, 22 Solberg 1988, Solberg 1991, Solberg 1987, Dybkǽr 1987) Subsequent to these 23 publications, alternative statistical methods for identifying outliers, analyzing reference 1 MASTER COPY 10/18/10 24 values, and determining the need for partitioning have been proposed. In addition, 25 concerns were expressed regarding the complexity and expense of compliance with the 26 original IFCC-CLSI standard and the lack of recommendations for handling small 27 reference sample sizes. This led to a revision, completed in 2008, that includes 28 recommendations for transference and validation of RI from other sources and promotes 29 robust methods for determining RI from small sample sizes. (Horowitz, 2008). 30 31 The ASVCP has recommended adherence to the CLSI-IFCC guidelines for the 32 determination of population-based RI. However, access to these guidelines is not readily 33 available in the veterinary community. In addition, fulfillment of human laboratory 34 standards is often deemed too expensive in veterinary medicine where the recommended 35 number of reference samples is seldom achievable. The need for veterinary-specific 36 guidelines that address concerns unique to animal species is recognized within the 37 veterinary community. 38 39 In response, the QALS Committee of the ASVCP formed a subcommittee to generate 40 guidelines for the determination of reference intervals in veterinary species and to address 41 additional topics of interest. The goal of this subcommittee was to develop balanced and 42 practical recommendations that are statistically and clinically valid. Guidelines that are 43 excessively complex or inaccessible due to high cost or large reference sample sizes will 44 fail to create the desired continuity within the veterinary community. In addition to 45 providing guidelines for the determination of de novo population-based RI for new tests 46 or methods or for new populations of animals, this document provides recommendations 2 MASTER COPY 10/18/10 47 on related topics, including transference and validation of RI from other sources, subject- 48 based and common RI, use of published RI, and establishing decision thresholds (or 49 decision limits). A consistent approach to the development and reporting of population- 50 based RI, and other clinical decision-making values, will benefit all veterinary 51 professionals. 52 53 These guidelines are modeled on the revised guidelines of the CLSI-IFCC for 54 establishing population-based RI, which were summarized in Veterinary Clinical 55 Pathology. (Horowitz 2008; Geffre 2009) Recommendations on other topics are based 56 on current literature and on the experience of individuals working in veterinary laboratory 57 medicine. These guidelines were independently reviewed by experts in the field of 58 clinical laboratory medicine and medical statistics and passed a formal review and 59 approval by the membership of the ASVCP. Examples of statistical procedures are 60 available in a forthcoming supplement to this document. These examples were generated 61 using the RI freeware, Reference Value Advisor. 62 (http://www.biostat.envt.fr/spip/spip.php?article63, accessed August 26, 2010) 63 64 As a guideline, these procedures may be applied as written or modified by the user for 65 specific purposes. The intended users of these guidelines include individuals working in 66 veterinary reference diagnostic laboratories, animal research clinical laboratories, 67 manufacturers of veterinary diagnostic equipment and assays, and authors of articles on 68 RI in veterinary species. In addition, veterinary clinicians who use RI should be familiar 69 with these procedures so that they can evaluate RI studies to ensure appropriate 3 MASTER COPY 10/18/10 70 application to their patient population. A list of definitions for terms used RI studies is 71 available in the Geffre et al review paper. (Geffre, 2009) 72 73 DETERMINATION OF DE NOVO REFERENCE INTERVALS FOR NEW 74 ANALYTES, NEW METHODS, OR NEW POPULATIONS 75 76 Preliminary investigation 77 Investigation of sources of biological variability and interference affecting measurement 78 of the analyte(s) in question is recommended in order to determine specifications for 79 collection and handling of samples and for selection and preparation of reference 80 individuals. This information also may be used to establish inclusion and exclusion 81 criteria and determine the need for separate RI based on animal factors (e.g., age, sex, 82 breed) or preanalytical techniques (e.g., serum vs. plasma). Analytical interference from 83 bilirubin, lipemia, and hemolysis may be considered in this investigation; however, 84 reference samples with these alterations typically are rejected as evidence of illness, non- 85 fasting, or poor sample handling. 86 87 Selection of the reference population 88 1. Define the reference population of interest, as well as the criteria used to confirm 89 health in individuals selected from this population (selection, inclusion, exclusion, 90 and partitioning criteria). The demographics of the reference population should be 91 representative of the patient population for which the RI will be used in making 92 clinical decisions. 4 MASTER COPY 10/18/10 93 1.1 Selection criteria must be defined. These are used to characterize the population 94 and verify the health of individuals. They may include but are not limited to the 95 following: (Walton 2001) 96 Biological (age, sex, breed, stage of reproductive cycle, production type) 97 Clinical (history and physical examination to establish health and 98 99 husbandry practices) 100 Geographical (location) and seasonal (effects of temperature and day length) characteristics. 101 NOTE: Additional testing may be required to establish health. The type and extent of 102 additional testing depends on the intended use of the proposed RI and may include, but is 103 not limited to, a complete minimum database (CBC, biochemical profile, urinalysis), 104 imaging, functional tests, fecal examination for parasites, lymphocyte phenotyping, and 105 historical or clinical follow-up. 106 107 108 1.2 Exclusion criteria are used to eliminate individuals that should not be included in the reference population. They may include but are not limited to the following: 109 Biological (e.g., fasted or non-fasted state, intense exercise, level of stress or excitement) 110 Physiological factors (illness, lactation, pregnancy, other). (Poole 1997) 111 Administration of pharmacologically active agents. Individuals receiving 112 pharmacologically active agents for treatment of specific disorders are 113 usually excluded. However, routine administration of preventative 114 dosages of anthelmintic medications typically is acceptable in most RI 115 studies. (Poole 1997) 5 MASTER COPY 10/18/10 116 NOTE: Some of these inclusion and exclusion criteria may be used to partition 117 reference populations into subgroups, for example, by age, sex, or reproductive 118 status. (Walton 2001) 119 2. Develop a questionnaire that will establish whether a reference individual conforms to 120 selection criteria, belongs to a partitioned subgroup, or should be excluded. The 121 questionnaire is filled out by the owner and by the individual(s) examining the subject 122 and collecting the sample. Owner consent for participation in the RI study is often 123 included in this questionnaire and is mandatory in many institutions. 124 3. Consider the number of healthy reference subjects available to provide reference 125 samples. Ideally a minimum of 120 reference individuals is available for determining 126 nonparametric RI and 90% confidence intervals (CI) with enough extra individuals to 127 allow for some rejection. Reference intervals determined from smaller sample sizes 128 are commonplace and often necessary in veterinary medicine. However, thorough 129 consideration for the effect of small sample size on the accuracy of population-based 130 RI should be addressed early in the study. The smaller the sample size, the higher the 131 degree of uncertainty in the estimation of the RI. 132 4. Reference individuals may be selected by either direct or indirect methods. Direct 133 methods involve selection of known healthy individuals from a general population 134 using specific criteria. Indirect sampling methods use medical databases containing 135 results from both healthy and non-healthy individuals. Statistical and nonstatistical 136 methods are employed to exclude samples from obviously unhealthy individuals, and 137 RI are generated from the remaining values. Because RI established using indirect 138 sampling methods inadvertently may include unhealthy individuals, RI derived in this 6 MASTER COPY 10/18/10 139 manner may not accurately reflect the distribution of analyte quantities in a healthy 140 population. In addition, information about preanalytical and analytical factors may 141 not be available. Consequently, direct sampling methods are strongly recommended, 142 and indirect sampling methods only should be used when other options for 143 establishing RI are unavailable. Two types of direct sampling are possible: 144 4.1 a priori in which inclusion and exclusion criteria are established prior to 145 selection of healthy reference individuals. This method is preferred when 146 information about how biological and preanalytical factors affect the analyte(s) 147 are well documented. 148 4.2 a posteriori in which inclusion and exclusion criteria are established after 149 selection and testing of healthy reference individuals. This method typically is 150 used when there is limited information about a new analyte or laboratory test, and 151 it is not known how biological or preanalytical factors affect analyte quantities. 152 153 Preanalytical procedures – Patient preparation, sample collection, and analytical 154 quality assessment 155 5. Preparation of the reference individuals, sample collection, sample handling, and 156 sample processing should be performed in a standardized manner that is consistent 157 with the methods used for patient testing. In addition, consideration should be given 158 to potential adverse effects of preanalytical factors in order to reduce variation that is 159 not due to inter- or intra-individual variability. 160 5.1 Patient preparation and handling (e.g. fasting or non-fasting, method of capture 161 and restraint, use of sedatives or anesthesia) should be standardized. 7 MASTER COPY 10/18/10 162 5.2 Sample collection (site, preparation of the site, vial type, collection system) and 163 handling of the specimen (transportation, temperature, and centrifugation) should 164 be standardized based on prior knowledge of the analyte. 165 5.3 Sample collection may need to be standardized for time of day or for season, 166 depending on the analyte being measured and the intended use of the RI. This is 167 especially important for certain hormones. Alternatively, samples may need to be 168 collected across seasons or throughout the day for a more general representation 169 of analyte concentrations. 170 171 5.4 Special sample handling requirements for certain analyte(s) must be known and strictly followed (e.g. on ice, anaerobic). 172 5.5 Analyte stability should be determined prior to the RI study. This information is 173 necessary to determine if certain analytes require specific storage conditions or 174 analysis within a defined interval and if sample storage and batch analysis can be 175 performed. 176 6. Estimates of analytical error (CV and bias) should be recorded for all methods. These 177 may be determined during the RI study or during initial method validation (MV) 178 studies. This information is necessary if transference of RI is utilized in the future. 179 These estimates of analytical error should fall within the quality requirement goals for 180 imprecision (CV), inaccuracy (bias), and total allowable error (TEa) established by 181 the laboratory for existing methods or during method validation studies for new 182 methods. Quality goals may be based on biologic variation, clinical interpretation of 183 test results, consensus documents, or all of these. 184 8 MASTER COPY 10/18/10 185 Analytical procedures 186 7. Analyze samples using methods that are monitored with strict quality control 187 procedures. (ASVCP QC Guidelines VCP publication or 188 http://www.asvcp.org/pubs/qas/index.cfm Conditions for analysis should be well 189 defined in a manner consistent with analysis of patient samples in order to reduce 190 variation that is not due to inter- or intra-individual variability. However, variation 191 that is part of everyday operation, such as changes in reagent lots and technical staff, 192 should be integrated into RI studies whenever possible to approximate normal 193 working conditions. 194 7.1 Establish a laboratory submission policy for RI study samples. 195 7.2 Establish rejection criteria for samples of inadequate quality. 196 7.3 Monitor results in real time so that errors can be detected when re-measurement 197 is still possible. This will prevent excessive rejection of reference values by 198 reducing the number of potential outliers. 199 NOTE: Certain analytes in avian and reptiles may be unusual, and yet physiologic, during 200 stages of the reproductive cycle, e.g., ionized calcium. Analytical interference with other 201 analytes caused by these unusual concentrations must be known and accounted for during 202 RI studies. 203 NOTE: Method(s) employed in establishing RI should be documented in detail, including 204 the specific make and model of analyzer and the source of the reagents and quality 205 control materials. 206 Statistical analysis of reference values 9 MASTER COPY 10/18/10 207 208 8. Prepare and examine histograms of the reference values for initial assessment of distribution and identification of potential outliers. 209 9. Identify outliers. Outliers are values that do not truly belong to the underlying 210 distribution of reference values. Inclusion of outliers will significantly affect 211 reference limits; however, apparent outliers or unexpected values should not be 212 eliminated indiscriminately. 213 9.1 Examine values that appear to be outliers in the histogram for errors. Errors may 214 include, but are not limited to the following: 215 Transcription errors 216 Preanalytical and analytical errors, including those resulting from 217 inclusion of inappropriate or poor quality samples (improper sample, 218 hemolysis, lipemia) 219 Inclusion of inappropriate reference individuals (animals subsequently 220 proven to be unhealthy, animals that should have been excluded due to 221 age, breed, physiology, etc.) 222 NOTE: Values resulting from these types of errors should be eliminated whether or not 223 they are located within the extremities of the distribution. 224 9.2 Use an appropriate statistical method to further examine the reference data for 225 outliers. The following are 2 of the most commonly used tests to detect outliers 226 in reference data, although other methods are available (Grubb 1950, Jain 227 2010). Optimal performance of these tests requires that the data approximate a 228 Gaussian distribution. (Horn 2001) Therefore, application of these tests 10 MASTER COPY 10/18/10 229 typically occurs after data has undergone transformation (if not Gaussian) and is 230 tested for normality. 231 Dixon’s outlier range statistic typically identifies the single most extreme 232 value at the upper or lower limits as an outlier. (Dixon 1983) The simplest 233 criterion of rejection is D/R > 0.3, where D is the absolute difference 234 between the most extreme value and the next nearest value divided by the 235 range of all values (R) including the extreme values. (Reed 1971) This 236 criterion is fairly conservative and favors retention of reference values. If 237 several values at one extremity appear to be outliers, the least most extreme 238 value can be treated as the most extreme for calculating the ratio (block 239 procedure). If the least most extreme value is determined to be an outlier, 240 all the more extreme values can be eliminated. (Barnett 1978) The ratio (r 241 criteria) also can be compared to published tables of critical values for more 242 stringent evaluation of outlier status. (Rorabacher 1991) Critical values vary 243 depending on the number of anticipated outliers at one or both extremities 244 (one- or two-tailed), the number of reference values, and the desired level of 245 confidence in detecting outliers (e.g., = 0.1 or 0.05). 246 Horn’s algorithm using Tukey’s interquartile fences identifies multiple 247 outliers located at the upper and lower extremities. (Horn and Pesce 2003, 248 Horn and Pesce 2005) The criterion for rejection is values exceeding 249 interquartile (IQ) fences set at Q1 - 1.5*IQR and Q3 + 1.5*IQR (IQR = 250 interquartile range; IQR = IQ3 – IQ1 where IQ1 and IQ3 are the 25th and 75th 11 MASTER COPY 10/18/10 251 percentiles, respectively). This test is more stringent than Dixon’s range 252 statistic. 253 9.3 Correct known errors in outliers if possible. 254 9.4 Eliminate outliers proven not to belong to the reference population by statistical 255 or other means. 256 9.5 Once outliers are eliminated, retest the remaining data for additional outliers. 257 9.6 When data do not approximate Gaussian distribution or cannot be transformed to 258 Gaussian distribution, these procedures do not perform optimally and may 259 erroneously identify values located in the tail of skewed distributions as outliers. 260 (Horn 2001) When data are non-Gaussian, nonparametric methods should be 261 used to establish RI (see below). Because nonparametric methods establish 262 reference limits by trimming the most extreme values, outliers have less of an 263 effect on the RI than with parametric and robust methods. (Horowitz 2008) 264 9.7 Boxplots are a nonparametric, graphical representation of quartile analysis with 265 the lower and upper edges of the box representing the 25th and 75th percentiles, 266 respectively. If reference data are displayed using boxplots, the whiskers should 267 be set at Q1 - 1.5*IQR and Q3 + 1.5*IQR, which are the fences delineating 268 outliers according to Horn’s algorithm. Values outside the whiskers are 269 considered outliers. Realize, however, that if the data are non-Gaussian, these 270 fences may not perform optimally. 271 272 Not all outliers and inappropriate values will be detected with these statistical methods. 273 (Solberg & Lahti 2005) Multiple outliers located at one or both extremities may have the 12 MASTER COPY 10/18/10 274 effect of masking the presence of outliers and rendering these methods unsuitable for 275 outlier detection. (Horn 2001) The best means by which to avoid inclusion of 276 inappropriate values within the reference data is to ensure that all reference individuals 277 are healthy and belong to the desired demographic and to avoid unintended preanalytical 278 and analytical variation. The challenge of correctly identifying outliers is magnified in 279 wildlife RI studies where health is difficult to substantiate and where manual or field 280 methods may introduce a higher level of imprecision and inaccuracy. 281 282 When health is well-defined and can reasonably be substantiated, conservative outlier 283 tests, which favor retention of values, are acceptable (e.g., Dixon’s range statistic, 284 confidence levels of = 0.05). This is analogous to low Type I error. However, when 285 “convenience samples” are used or when health is difficult to substantiate, as is often the 286 case with wildlife RI studies, more stringent outlier tests should be applied (Horn’s 287 algorithm using Tukey’s interquartile fences or comparing Dixon’s r criteria to tables of 288 critical values with confidence levels of = 0.1). These more stringent criteria are more 289 likely to exclude potentially erroneous values (low Type II error). 290 291 In conclusion, attempts to identify and eliminate outliers should be made during the 292 analysis of reference values. Outliers should not be eliminated indiscriminately because 293 these values may represent the true distribution of values in a healthy population. 294 However, inclusion of true outliers can significantly affect the determination of reference 295 limits rendering the RI less representative of the desired demographic. Clinical 13 MASTER COPY 10/18/10 296 experience and common sense also must be employed in determining when to retain or 297 eliminate outlying values. 298 299 10. If parametric or robust methods will be used to determine RI, use a goodness-of-fit 300 test to determine if the distribution of the reference data is Gaussian. One of the 301 following methods may be selected: 302 Anderson-Darling 303 Kolomogorov-Smirnov 304 Shapiro-Wilk 305 D’Agostino and Pearson omnibus 306 If distribution is not Gaussian, transform the data using an appropriate function (e.g., 307 log or Box-Cox transformation) and reassess the distribution. If Gaussianity cannot 308 be established after several transformation trials, parametric methods cannot be used 309 to establish RI. Although best applied to data with a symmetrical distribution, the 310 robust method may be used when reference values do not exhibit Gaussian 311 distribution. (Horowitz, 2008; Horn & Pesce, 2005, Chapter 6, page 47-57) 312 11. Select statistical method for analysis based on the number and distribution of 313 reference values. 314 11.1 Nonparametric methods do not require assumption of a particular distribution of 315 the data and are recommended when ≥120 reference samples are available. 316 Nonparametric methods typically encompass the central 95th percentile of 317 reference values and use the 2.5th and 97.5th fractile as the lower and upper 318 reference limit, respectively. (Horn and Pesce 2003) Nonparametric determination 14 MASTER COPY 10/18/10 319 of 90% confidence intervals (CI) of the lower and upper reference limits are 320 possible with ≥120 reference samples. Although robust methods are preferred 321 when there are <120 reference values (see below), nonparametric methods can be 322 used when the distribution of reference data is not Gaussian; however, 90% CI 323 cannot be calculated nonparametrically. (Horowitz 2008) Forty is the minimum 324 number of values required to determine central 95% RI nonparametrically, but in 325 this situation, the most extreme values serve as the lower and upper reference 326 limits. Because these extreme values may include outliers, it is important to have 327 a sufficient number of samples to allow elimination of outliers (Horn and Pesce 328 2003); for example, n = 40 after elimination of outliers or n = 44, which should 329 allow trimming at both extremities. 330 11.2 Robust methods are recommended when 20 ≤ x ≤ 120 reference samples are 331 available. The robust method utilizes an iterative process to estimate location and 332 spread of the data. (Horn & Pesce 2005, 1999, 1998) Although the robust method 333 performs best when reference data has a symmetrical distribution, it can be used 334 in the absence of Gaussianity. Ninety percent CI should be determined using 335 robust methods. The robust method is included in several clinical laboratory 336 statistical (or software) programs (CBstat 337 http://direct.aacc.org/ProductCatalog/Product.aspx?ID=2475, Reference Value 338 Advisor freeware available at http://www.biostat.envt.fr/spip/spip.php?article63 ), 339 and MedCalc at http://www.medcalc.be/. 340 341 11.3 Parametric methods may be used when 20 ≤ x ≤ 120 reference samples are available and the data has, or can be transformed to, Gaussian distribution. 15 MASTER COPY 10/18/10 342 Parametric methods encompass slightly more than the central 95% of the data and 343 establish the lower and upper reference limits at mean minus 2SD and mean plus 344 2SD, respectively (SD = standard deviation). Ninety percent CI should be 345 determined using parametric methods. 346 11.4 When RI are calculated from 10 ≤ x ≤ 20 reference values, the following 347 information should be included: 348 A histogram of the data 349 A list of all reference values 350 Mean (if Gaussian) or median (if not Gaussian) (minimum and maximum 351 352 353 values should be reported if a list of all reference values are not included) RI should be calculated by the robust (distribution independent) or parametric (if Gaussianity can be established) method 354 Although not ideal, it is acknowledged that situations occur in veterinary 355 medicine in which RI must be calculated from 10 ≤ x ≤ 20 reference values. 356 Emphasis should be placed on collecting samples that are free from unintended 357 variability by paying strict attention to selection of suitable reference subjects and 358 adherence to standardized collection techniques and well controlled methods of 359 analysis. Evaluation for the presence of outliers is particularly important with 360 small sample sizes, because the presence of a single outlier has a significant effect 361 on estimated reference limits. If outliers are eliminated, every attempt should be 362 made to collect replacement samples. 363 NOTE: Reference intervals calculated by several of the methods listed above can be 364 compared. If the RI are similar, any of the statistical methods is acceptable. (Horn 1998) 16 MASTER COPY 10/18/10 365 When RI differ, clinical judgment may be required to select the most appropriate 366 reference limits with some experts recommending selection of the narrower RI in order to 367 limit the number of false negative results. (Horn 1998) 368 11.5 This document does not contain recommendations for determining RI from <10 369 reference samples because reliable estimates of population-based reference limits 370 cannot be made from such small sample sizes. 371 NOTE: Confidence intervals around the upper and lower reference limits should be 372 calculated whenever sample size permits. Confidence intervals provide an estimate of 373 the uncertainty of the reference limits and are generally narrower for larger sample sizes 374 than for smaller sample sizes. Boyd and Harris recommend that CI should not exceed 0.2 375 times the width of the RI. (Harris 1995) When CI exceed this limit, an effort to collect 376 additional reference samples should be made. 377 12. Determine the need for partitioning into subclasses based on physiological 378 differences that are expected to result in important differences in RI. Partitioning 379 favors homogeneous sub-populations, decreasing variability between individuals and 380 narrowing the RI. However, partitioning only should be considered if there is a 381 minimum of 20 individuals within each subclass. Partitioning criteria should consider 382 not only the mean of the analyte, but also the subgroup standard deviations (SD). 383 More recent partitioning criteria examine the proportion of each subgroup that would 384 fall outside the upper and lower limits of a combined RI (Lahti 2004, Ceriotti 2009). 385 This proposal is based on the fact that common RI contain 95% of reference values 386 and exclude 2.5% of values at the upper and lower extremities. Consideration also 387 must be given to unequal sizes of the subgroups within the general population as well 17 MASTER COPY 10/18/10 388 as within the reference sample group. (Lahti 2002 – partitioning) The following are 389 some simple recommendations: 390 12.1 Partitioning is recommended if the difference between subgroup means exceeds 391 25% of the reference range (range = upper limit – lower limit) of the combined 392 central 95% RI. (Sinton, 1986) This method is conservative in recommending 393 partitioning and requires Gaussian distribution of data for optimal performance. 394 (Lahti 2004 existing methods) 395 12.2 Partitioning is recommended if the ratio of subgroup SD (larger SD/small SD) 396 exceeds 1.5, regardless of the subgroup means. (Harris and Boyd 1990) If this 397 criterion is exceeded, Harris and Boyd recommend that subgroup means be 398 compared by the standard normal deviate test. If there are 120 samples in each 399 subgroup, partitioning is recommended if z > 3. The z value is calculated as 400 follows: z = mean1 – mean2 / [(SD12/n1) + (SD22/n2)]1/2 401 402 If there is a different number of samples in the subgroups (n), a correction factor 403 is applied to the “critical z-statistic” (critical z-statistic = 3 x (naverage/120)1/2). 404 This procedure works optimally when the data has a Gaussian distribution and the 405 subclasses are of similar size and SD. (Lahti 2004 – existing) 406 12.3 Partitioning recommendations by Lahti et al for Gaussian distributions begin 407 with the same subgroup SD ratio criterion of >1.5. However, if the SD ratio is ≤ 408 1.5, then the differences between the upper (DU) and lower limits (DL) of the 2 409 subgroups should be examined in relation to the smaller of the subgroup SD 410 (SDsmaller). (Lahti 2002 – Gaussian) 18 MASTER COPY 10/18/10 411 DU = URL1 – URL2 (use absolute values) 412 DL = LRL1 – LRL2 413 Partitioning is not recommended when both DL and DU < 0.25 SDsmaller 414 Partitioning is recommended when either DL, DU or both ≥ 0.75 SDsmaller 415 When either DU or DL or both fall in between these criteria, the decision on 416 whether to partition is made using non-statistical criteria. 417 12.4 The partitioning recommendations above, while reasonably simply to 418 calculate, contain several weaknesses. (Lahti 2004 – existing methods) To correct 419 for these weaknesses, Lahti et al made the following general recommendations for 420 partitioning; however, application of these criteria is more challenging. (Lahti 421 2004) Partitioning is recommended if >4.1% or <0.9% of a subgroups falls 422 outside the upper or lower limits of a combined RI. If 1.8% < x < 3.2 % of a 423 subgroup falls outside the combine RI, partitioning is not recommended. When 424 the proportions of a subgroup outside a combined RI are between these criteria, 425 the decision to partition the RI is made using non-statistical criteria. 426 12.5 Non-statistical criteria that support partitioning include: 427 428 If descriptors used to assign a patient to a partitioned subgroup are easily obtainable and maintained in the patient record. 429 If reference limits serve as critical clinical decision limits. 430 If the literature documents differences between subgroups 431 13. Document all previous steps and procedures so that RI are clearly defined. A 432 complete and detailed RI study summary document should be available to users upon 433 request. 19 MASTER COPY 10/18/10 434 14. Reference intervals determined de novo within a laboratory should be reviewed 435 every 3 to 5 years and re-validated if needed. Re-validation is necessary anytime there 436 has been a change in assay methodology or a significant change in patient 437 populations. (See the section on transference and validation.) 438 Postanalytical procedures – Presentation of reference intervals 439 15. Information included in a laboratory report should aid the clinician in the medical 440 decision making process and be presented in a clear and concise manner. 441 15.1 Reference intervals typically are printed on the patient report; however, this 442 443 should occur only when the RI is applicable to that patient. 15.2 Reference intervals that deviate from customary percentiles and limits or are 444 specific to a certain subclass (age, sex) should clearly be identified on the 445 report. 446 447 448 15.3 It is useful to indicate which patient values are increased or decreased in comparison to the RI. 15.4 Information that may be important for clinical decision-making, but that cannot 449 be contained within the patient’s laboratory report, should be available to the 450 clinician in a written report (RI study summary document). This information 451 may include, but is not limited to: (Plebani) (see Table 3) 452 453 Reference population demographics and number of reference subjects sampled 454 Subject preparation and time or season of collection, if relevant 455 Sample type and handling 20 MASTER COPY 10/18/10 456 457 458 reagents employed 459 460 461 Quality specifications of the analytical method and specific analyzer and Statistical methods used to evaluate the reference values and to determine the reference limits Confidence intervals around the reference limits 15.5 Changes in RI owing to introduction of new methods or analyzers or 462 adjustments to RI resulting from changes in population demographics should 463 be communicated to all users. 464 465 TRANSFERENCE AND VALIDATION OF REFERENCE INTERVALS 466 In order to forego the expense and difficulty of establishing intra-laboratory RI, many 467 laboratories adopt RI from other laboratories or from instrument manufacturers. The 468 following procedures are recommended for the transference and validation of RI adopted 469 from other sources. 470 1. Several issues should be scrutinized when external RI are considered for transference. 471 1.1 The appropriateness of the reference population with respect to age, sex, 472 breed, geography, physiology, etc. 473 1.2 Differences in pre-analytical techniques, such as patient preparation and 474 collection method. 475 1.3 Differences in test methodology 476 1.4 Differences in instrument accuracy and imprecision (analytical quality). 477 1.5 Differences in analytical quality requirements established by the laboratory 478 donating the RI and the laboratory adopting them. (K Freeman) 21 MASTER COPY 10/18/10 479 If significant differences are detected in the above areas, transference may not be 480 appropriate. 481 information necessary to determine the appropriateness of transference. Many RI studies are not well documented and often lack the detailed 482 2. Estimates of analytical error (CV and bias) are necessary to determine transferability. 483 RI can be transferred between laboratories using different analytical methods as long as 484 the methods possess similar analytical quality (see section 3.5). In addition, a transferred 485 RI only remains valid as long as the laboratory maintains the original precision (CV) and 486 accuracy (bias) that were used to establish transference validity. (Ceriotti 2009) 487 3. A comparison of methods study may be used to determine if analytical methods are 488 similar. (Jensen 2006 and ASVCP QC Guidelines website) 489 3.1 Analytical methods are comparable if the slope of the regression line 490 approximates 1.0 and the y-intercept is small relative to the data range and RI. If 491 comparable, RI can be transferred directly. 492 3.2 If systematic difference (bias) exists between analytical methods, regression 493 statistics are used to adjust the upper and lower reference limits. This commonly 494 is used when a laboratory changes instruments or methods and transfers their 495 existing RI to the new instrument or method. Transference using regression 496 statistics only should be employed for one change of instrumentation or 497 methodology. Depending on the distribution of data, alternate statistics may be 498 required, e.g., Passing-Bablock or Deming regression, difference of means for 499 analytes with narrow distributions such as electrolytes. An example of adjusting a 500 RI for bias using regression statistics can be found in the forthcoming supplement 501 to this document. 22 MASTER COPY 10/18/10 502 4. Once it is determined that a RI is suitable for transference, validation of the transferred 503 RI may be accomplished by one of the following procedures: 504 4.1 Subjective assessment requires complete and detailed documentation of the 505 original RI study including all the factors listed in section 3.1 as well as 506 information concerning statistical methods used for the analysis of the reference 507 values. Because such detailed summaries are infrequently available, this 508 validation procedure is seldom sufficient. 509 4.2 Evaluating 20 samples representative of the laboratory’s own patient 510 population against the candidate RI is relatively quick and straightforward. These 511 values first should be examined for outliers. If outliers are detected, they should 512 be eliminated and additional samples collected. If ≤ 2 of the 20 values fall outside 513 the candidate RI, it is considered transferable. If 3 or 4 values fall outside the RI, 514 another 20 patients can be tested and interpreted in the same manner as the 515 original 20 samples. If > 4 of the original 20 values fall outside the candidate RI, 516 transference is rejected for that analyte. This procedure is basically a binomial 517 test and will not determine whether the transferred RI is too wide for the receiving 518 laboratory. If all 20 samples fall within the candidate RI, it may be 519 inappropriately wide for the adopting laboratory. When this occurs, another 20 520 samples should be evaluated. The probability that all 20 results will be within the 521 candidate RI is about 0.36 and with 40 samples, the probability falls to about 0.13. 522 If all 40 samples fall within the candidate RI, then it is likely too wide and de 523 novo RI should be determined. (Horn and Pesce 2005, Chapter 10, page 77-80.) 23 MASTER COPY 10/18/10 524 4.3 A more thorough validation uses results from 40-60 healthy subjects from the 525 laboratory’s patient population. If individual results are available from the 526 original RI study, the reference values from both groups are compared using more 527 sophisticated statistical equations (Mann-Whitney U test, median test, Siegel- 528 Tukey test, Kolmogorov Smirnov test). (Horowitz) With the introduction of the 529 robust method, acceptable RI can be generated from 40-60 reference samples, 530 obviating the need for transference and validation using this method. 531 NOTE: The clinical use of the test should be considered when selecting the method for 532 validating a transferred RI, e.g., for more critical tests, procedure 4.2 or 4.3 should be 533 used. 534 5. It is the responsibility of the end user to validate RI provided by manufacturers of 535 veterinary diagnostic tests and analyzers. Manufacturers may generate RI using a single 536 analyzer or multiple analyzers at one or more locations (multicenter RI – see below). 537 Manufacturers should provide sufficient information regarding the RI so that their clients 538 can assess the quality and applicability of the RI study to their patients. Information 539 provided by the manufacture should include, but is not limited to the following: 540 Selection method of reference subjects (direct or indirect) 541 Demographics of the reference sample group 542 Preanalytical and analytical factors 543 Number of reference values used to establish RI 544 Statistical methods used to identify outliers and generate RI 545 546 6. Indications for re-validation of RI include but are not limited to: Excessive false positive and false negative results 24 MASTER COPY 10/18/10 547 548 549 Significant changes in patient populations, preanalytical techniques, or analytical quality Periodic reassessment of RI every 3-5 years 550 551 COMMON (or multicenter) REFERENCE INTERVALS 552 Another alternative to determining RI de novo within each laboratory is for several 553 laboratories serving a similar patient population to contribute to the generation of 554 common (or multicenter) RI. The following summarizes the advantages and important 555 considerations of this approach. (Petersen 2004, Horowitz 2008, Jones 2004) 556 1. Advantages of common RI include: 557 1.1 Standardization of results, reporting, and interpretation in a mobile population 558 in which veterinary patients may change locations and laboratories during their 559 lifetimes. 560 1.2 Ability to recruit large numbers of reference samples from multiple 561 participating laboratories. 562 1.3 Large numbers of reference values allow partitioning according to desired 563 criteria (age, sex, breed, use, activity, other). 564 1.4 Distribute cost of establishing RI among multiple laboratories. 565 2. Laboratories participating in a common RI study should adhere to the following 566 procedures: 567 2.1 Laboratories contributing results to a common RI do not have to have the 568 same analyzer (manufacturer and model number). However, all analyzers must 569 be calibrated to produce comparable results (Jensen 2006) and must meet the 25 MASTER COPY 10/18/10 570 same quality requirements. Common calibration and performance quality are 571 essential if the resulting RI are to be used by all participating laboratories. If 572 common RI are adopted by a laboratory that did not participate in the study, the 573 common RI must be validated, even if the laboratory uses the same analyzer as 574 was used in the study. 575 2.2 Determine if similar populations are present among the participating 576 laboratories – a prerequisite for the use of common RI. 577 2.3 Establish uniform selection and exclusion criteria for defining reference 578 individuals and establishing health, as detailed in section 1.2 of these guidelines. 579 2.4 Standardize pre-analytical and analytical factors, as detailed in sections 1.6 580 and 1.7 of these guidelines. 581 2.5 Establish quality requirement goals for imprecision (CV) and inaccuracy 582 (bias) for all analytes. These may be based on biologic variation, clinical 583 interpretation of test results, or both. 584 2.6 Bias, in particular, must be controlled and minimized by each laboratory. If 585 bias varies significantly among participating laboratories, the use of common RI 586 may lead to clinical misclassifications. A ‘maximum allowable bias’ should be 587 established based on calculated TE using the maximum CV obtained by 588 participating laboratories. If a laboratory exceeds this predetermined bias limit, 589 measures should be initiated (re-calibration, etc.) to return bias to limits that allow 590 continued use of the common RI. 26 MASTER COPY 10/18/10 591 2.7 Use calibrators traceable to an international standard to determine the 592 trueness and comparability of measurements across all participating laboratories. 593 Alternatively, a single, pooled specimen may be used as a common calibrator. 594 2.8 Once common RI are established, variability caused by changes in calibrator 595 lots must be minimized. Instead of using the mean assigned to the calibrator by 596 the manufacturer, a mean value for a common calibrator should be determined 597 from results submitted by all participating laboratories. Each laboratory 598 establishes a mean calibrator value by repeat analysis (n = 10 to 20 repetitions) 599 and then submits this mean for determination of a common mean. 600 2.9 Validate quality control procedures designed for high probability of error 601 detection and low probability of false rejection in order to monitor and maintain 602 stable performance. 603 2.10 If possible, use the same quality control materials and reagents to facilitate 604 standardization and comparison of results. For analyzers with unique QC 605 materials (hematology analyzers), this may not be possible. 606 NOTE: Manufacturers of diagnostic equipment may provide users with ‘common RI’ 607 determined from one or more analyzers; however, RI validation is recommended to 608 ensure that local patient populations are represented by the common RI and that 609 performance of the on-site analyzer meets calibration and quality performance 610 requirements established in the common RI study. 611 612 USE OF PUBLISHED REFERENCE INTERVALS 27 MASTER COPY 10/18/10 613 Interpreting clinical data using inappropriate RI may lead to misclassification of a patient, 614 which can result in misdiagnoses, improper treatments or both. Unless a RI is 615 representative of the patient’s demographics and is determined using similar preanalytical 616 procedures, and comparable analytical methods, it is not appropriate as a diagnostic 617 reference for clinical decision-making. Reference intervals published in textbooks, 618 journal articles, and web-based databases or provided by instrument manufacturers may 619 or may not contain sufficient information to determine whether the RI is appropriate for a 620 particular patient. In addition, the quality of published RI is quite variable. In addition to 621 information regarding preanalytical and analytical procedures, the quality of a RI depends 622 on the reference sample size, the use of procedures to detect and eliminate outliers, and 623 correct use of statistical procedures to estimate the reference limits. Published RI should 624 be used with caution, and only when sufficient information is available to determine their 625 quality and applicability to the patient and analytical method. If published RI are adopted 626 for extended use, appropriate validation procedures should be performed as described in 627 this document. 628 629 BIOLOGICAL VARIATION, INDIVIDUALITY, AND SUBJECT-BASED 630 REFERENCE INTERVALS 631 Population-based reference intervals serve as a comparison for patient test results when 632 an alternative frame of reference is not available. However, due to relatively high inter- 633 individual variability, population-based reference intervals sometimes lack necessary 634 sensitivity to detect changes in the health of an individual. The following 635 recommendations provide guidance for the appropriate use of subject-based RI. 28 MASTER COPY 10/18/10 636 1. Subject-based RI are more sensitive than population-based RI for disease detection 637 when intra-individual biologic variation, or coefficient of variation of an individual 638 (CVI), is less than inter-individual variation, or CV of a group (CVG). (Fraser 2004) 639 1.1 The index of individuality provides an objective criterion to determine the 640 relative utility of subject-based versus population-based RI. A quantitative 641 measure of individuality, the index of individuality is represented by the equation, 642 (CVI2 + CVA2)1/2 / CVG, where CVA is analytical variation (random error or 643 imprecision). Because CVA < CVI for many automated assays, the index of 644 individuality is often simplified as CVI/CVG. (Fraser 2004) 645 1.2 When the index of individuality is < 0.6, a subject-based RI is preferable to a 646 population-based RI, whereas when it is >1.4, individual RI yield no more 647 information than population-based RI. (Fraser and Harris 1989) For patient 648 monitoring, using an index < 0.48 rather than <0.6 increases the probability of the 649 subject-based RI detecting change in a monitoring situation. (Iglesias Canadell et 650 al. 2005) 651 1.3 With subject-based RI, a reference change value (RCV) serves to determine 652 whether a difference between consecutive measurements in an individual is 653 significant (p ≤ 0.05). The RCV is based upon CVI values in health and the 654 dispersion of these variations across a population: RCV = z x [2 x CVI2 + CVA2]1/2 655 where z represents the z-statistic; since CVA < CVI for many automated assays, 656 RCV is simplified as z x 21/2 x CVI. RCV is best applied when CVA < 0.5 x CVI. 657 1.4 The z-statistic conventionally used for RCV calculation is z = 1.96 [5% 658 probability of type I error]. When larger z-factors are used, the probability of a 29 MASTER COPY 10/18/10 659 significant change being detected increases; with z = 3.34 the probability of 660 detecting change increases from 50% (z = 1.96) to 90%. (Iglesias Canadell et al. 661 2004) 662 2. To use subject-based RI, it is necessary to know the CVI for each analyte, as well as 663 the imprecision of the analytical method for that analyte. 664 2.1 Published CVI are available for many analytes in the dog (Jensen and 665 Kjelgaard-Hansen, Wiinberg) and for some exotic species (Bertelsen). 666 2.2 Biologic variation can be measured with only a small number of healthy 667 reference individuals when care is taken to minimize pre-analytical variation; 668 thus, these data may readily be measured by a single laboratory when published 669 biologic variation data are not available. (Fraser and Harris) 670 2.3 Use of CVI and RVC derived from healthy individuals to determine 671 significant changes in analyte quantities in patients with stable chronic diseases 672 may not be appropriate. Consequently, estimates of CVI from patients with 673 chronic stable disease are being developed in human medicine to better monitor 674 chronic disease conditions. (Ricos 2007) This information currently is not 675 available in veterinary medicine. 676 677 EVALUATING TEST ACCURACY AND ESTABLISHING DECISION 678 THRESHOLDS (or decision limits) 679 The clinical utility of a test depends partly on test accuracy – that is, the ability of the test 680 to discriminate between patients with disease and without disease. Test accuracy, in turn, 681 depends on the decision limit used for determining a positive or negative result. Unlike 30 MASTER COPY 10/18/10 682 RI, which are “defined by statistical methods and are descriptive of specific populations, 683 decision thresholds are defined by consensus and distinguish among different 684 populations”. (Horowitz 2008) The following procedure outlines the steps and basic 685 principles required for designing prospective studies to evaluate the diagnostic accuracy 686 of a clinical laboratory test and to establish diagnostic threshold. (Jorgensen 2004, 687 Peblani 2004, Zwieg 1995) These same principles can be used to critically evaluate data 688 retrospectively. 689 1. Define the clinical question with regards to the following factors: 690 1.1 Characterize the target population as to the frequency and duration of disease, 691 as well as age, sex, and other relevant information that aids in interpretation of 692 test results. 693 1.2 State the management decision to be made concerning the disease in 694 question. 695 1.3 Identify the role of the test in the clinical decision-making process with 696 regards to the disease. 697 2. Prospectively select individuals (study sample) that are representative of the relevant 698 target population. The study sample should consist of subjects that are anticipated to test 699 both positive and negative for the test under investigation. Consult a statistician to 700 establish the size of the study sample required for statistically relevant results. 701 2.1 Diversity within the target population should accurately represent what is 702 expected in clinical practice. 703 2.2 If the clinical question concerns the presence or absence of a disease, a 704 statistically relevant number of individuals should have the disease in question. 31 MASTER COPY 10/18/10 705 2.3 If the clinical question concerns determining the severity or prognosis of a 706 disease, the entire sample may consist of diseased animals representing the entire 707 spectrum of disease severity or outcome. 708 2.4 To prevent bias, selection of study subjects should be independent of test 709 results for the test or analyte being evaluated. 710 3. Whenever possible, study subjects should be tested with the test under investigation 711 without knowledge of their disease classification to prevent prejudiced decision-making. 712 3.1 When comparing performance of multiple tests, tests should be executed on 713 all subjects at the same time or at the same stage of disease, and all tests should be 714 performed on the same sample. 715 3.2 If sample stability permits, assaying samples in a single batch minimizes 716 between-run analytical variance. 717 3.3 Subjects with unexpected test result should not be excluded from the study to 718 avoid bias favoring test performance. 719 4. Comprehensive examination and alternative testing are used to establish true disease 720 positive and true disease negative status. For tests evaluating disease severity or 721 prognosis, standardized staging, grading, or scoring schemes (Hayes, 2010) and common 722 outcome assessments should be used. 723 5. Receiver-operating characteristic (ROC) curve are created by plotting the sensitivity 724 and specificity of the test under investigation at a variety of decision thresholds. (Gardner 725 2006, Stephan 2003) ROC curves subsequently can be used to compare performance of 726 multiple tests and to select of decision thresholds that optimally answer the clinical 727 question or satisfy the diagnostic requirement. 32 MASTER COPY 10/18/10 728 5.1 The area under the curve (AUC) is an estimate of test accuracy. Under most 729 circumstances when comparing multiple tests, the more accurate test has the 730 higher AUC. 731 5.2 Optimal decision limits are selected by location on the ROC plot (most upper 732 left point) or by determining the decision limit with the highest proportion of 733 correct interpretations (most true positive and true negative results). 734 5.3 Confidence intervals around points on an ROC curve can be derived 735 parametrically and non-parametrically. 736 6. Further confirmation of the true clinical state of each subject should be done during or 737 after the completion of the study without utilizing the results of the test under 738 investigation. 739 6.1 This provides quality control crosscheck to insure that previous criteria for 740 disease classification are accurate. 741 6.2 Confirmation procedures may include histopathology (surgical biopsy or 742 necropsy) or preferably long-term follow-up regarding the course of disease. 743 744 Summary and closing 745 A uniform and consistent approach to establishing RI will benefit the entire veterinary 746 medical community. The acceptance of statistical methods for establishing RI from small 747 samples sizes, the approval of transference and validation as a valid method for obtaining 748 RI, and a growing interest in common RI will expand the ability of veterinary diagnostic 749 laboratories to provide RI for a variety of species and distinct subgroups. Adherence to 750 these guidelines by all those establishing and publishing RI in animals should facilitate 33 MASTER COPY 10/18/10 751 communication within the broader veterinary community. By providing detailed 752 information in RI study summaries, judicious use of published RI may be possible (see 753 Table 3). In the absence of appropriate, population-based RI, subject-based RI may be a 754 viable alternative for interpreting clinical data in certain circumstances. 755 756 757 758 References 759 ASVCP Quality Control Guidelines 760 http://www.asvcp.org/pubs/pdf/ASVCPQualityControlGuidelines.pdf accessed 761 10/13/2010 762 Barnett V, Lewis T. Outliers in Statistical Data. Chichester, England: John Wiley and 763 Sons, Ltd.; 1978;381-386. 764 Bertelsen MF, Kjelgaard-Hansen M, Howell JR, Crawshaw GJ. Short-term 765 biological variation of clinical chemical values in Dumeril’s monitors (Varanus 766 dumerili). J Zoo Wildl Med 2007;38(2):217-21. 767 Ceriotti F, Hinzmann R, Panteghini M. Reference intervals: the way forward. Ann Clin 768 Biochem 2009;46(Pt 1): 8-17. 769 Dixon WJ. Processing data for outliers. Biometrics 1983;9:74-89. (corrections to this 770 article were made by Rorabacher) 771 Dybkǽr R. Approved recommendation (1987) on the theory of reference values. Part 6. 772 Presentation of observed valued related to reference values. Clin Chim Acta 773 1987;170:S33-S42. 34 MASTER COPY 10/18/10 774 Fraser CG. Inherent biological variation and reference values. Clin Chem Lab Med 775 2004;42:758-764. 776 Fraser CG, Harris EK. Generation and application of data on biological variation in 777 clinical chemistry. Crit Rev Clin Lab Sci 1989;27:409-437. 778 Gardner IA, Greiner M. Receiver-operating characteristic curves and likelihood ratios: 779 improvements over traditional methods for the evaluation and application of veterinary 780 clinical pathology tests. Vet Clin Pathol 2006;35:8-17. 781 Geffré A, Friedrichs K, Harr K, Concordet D, Trumel C, Braun JP. Reference 782 values: a review. Vet Clin Pathol 2009;38(3):288-98. 783 Grasbeck R, Saris NE. Establishment and use of normal values. Scand J Clin Lab 784 Invest. 1969;26(Suppl 110):62-63. 785 Grubb FE. Sample criteria for testing outlying observations. Annal Math Stat 786 1950;21:27-58. 787 Harris EK, Boyd JC. On dividing reference data into subgroups to produce separate 788 reference ranged. Clin Chem 1990;36(2):265-270. 789 Harris EK, Boyd JC. Statistical bases of reference values in laboratory medicine. New 790 York: Marcel Dekker, 1995:77-91. 791 Hayes G, Mathews K, Kruth S, Doig G, Dewey C. Illness severity scores in veterinary 792 medicine: what can we learn. J Vet Intern Med 2010;24:457-466. 793 Horn PS, Feng L, Li Y, Pesce AJ. Effect of outliers and nonhealthy individuals on 794 reference interval estimation. Clin Cehm 2001;47(12):2137-2145. 795 Horn PS, Pesce AJ. Reference intervals: an update. Clin Chim Acta 2003;334:5-23. 35 MASTER COPY 10/18/10 796 Horn PS, Pesce AJ. Reference intervals: a user’s guide, AACC Press, Washington DC, 797 2005. 798 Horn PS, Pesce AJ, Copeland BE. A robust approach to reference interval estimation 799 and evaluation. Clin Chem 1998;44(3):622-631. 800 Horowitz GL, Altaie S, Boyd J, Ceriotti F, Gard U, Horn P, Pesce A, Sine H, 801 Zakowski J. Clinical and Laboratory Standards Institute (CLSI). Defining, establishing, 802 and verifying reference intervals in the clinical laboratory; approved guidelines, 3rd ed, 803 CLSI document C28-A3, Vol. 28, No. 3, 2008. 804 Iglesias Canadell N, Hyltoft Petersen P, Jensen E, Ricos C, Jorgensen PE. Reference 805 change values and power functions. Clin Chem Lab Med 2004;42:415-422. 806 Iglesias Canadell N, Hyltoft Petersen P, Ricos C. Power function of the reference 807 change value in relation to cut-off points, reference intervals and index of individuality. 808 Clin Chem Lab Med 2005;43:441-448. 809 Jain RB. A recursive version of Grubb’s test for detecting multiple outliers in 810 environmental and chemical data. Clin Biochem 2010;xx:xx-xxx. 811 Jensen AL, Kjelgaard-Hansen M. Method comparison in the clinical laboratory. Vet 812 Clin Pathol 2006;35:276-286. 813 Jones GRD, Barker A, Tate J, Lim C, Robertson K. The case for common reference 814 intervals. Clin Biochem Rev 2004;25:99-104. 815 Jorgensen LG, Brandslund I, Hyltoft Petersen P Should we maintain the 95 percent 816 reference intervals in the era of wellness testing? A concept paper. Clin Chem Lab Med 817 2004;42:747-51. 36 MASTER COPY 10/18/10 818 Lahti A. Partitioning biochemical reference data into subgroups: comparions of existing 819 methods. Clin Chem Lab Med 2004;42:725-733. 820 Lahti A, Hyltoft Petersen P, Boyd JC. Impact of subgroup prevalences on partitioning 821 Gaussina-distributed reference values. Clin Chem 2002;48:1987-99. 822 Lahti A, Hyltoft Petersen P, Boyd JC, Fraser C, and Jørgensen N. Objective criteria 823 for partitioning Gaussian distributed reference values into subgroups. Clin Chem 824 2002;48(2):338-352. 825 Lahti A, Hyltoft Petersen P, Boyd JC, Rustad P, Laake P, Solberg HE. Partitioning of 826 nongaussian-distributed biochemical reference data into subgroups. Clin Chem 827 2004;50(5):891-900. 828 Petersen H, Rustad P. Prerequisites for establishing common reference intervals. Scand 829 J Clin Lab Invest; 2004; 6; 64(4):285-92. 830 PetitClerc C, Solberg HE. Approved recommendation (1987) on the theory of reference 831 values. Part 2. Selection of individuals for the production of reference values. Clinica 832 Chimica Acta; 1987; 170(2-3):S1-S11. 833 Plebani M. What information on quality specifications should be communicated to 834 clinicians, and how? Clin Chim Acta 2004;346(1):25-35. 835 Poole T. Happy animals make good science. Lab Anim; 1997; 31(2):116-24. 836 Reed AH, Henry RJ, Mason WB. Influence of statistical method used on the resulting 837 estimate or normal range. Clin Chem 1971;17:275-284. 838 Ricos C, Iglesias N, Garicia-Lario J, et al. Within-subject biological variation in 839 disease : collated data and clinical consequences. Ann Clin Biochem 2007;44:343-352. 37 MASTER COPY 10/18/10 840 Rorabacher DB. Statistical treatment for rejection of deviant values: critical values of 841 Dixon’s Q parameter and related subrange ratios at the 95% confidence level. Anal Chem 842 1991;63(2):139-146. 843 Sinton TJ, Cowley D, Bryant SJ. Reference intervals for calcium, phosphate, and 844 alkaline phosphatase as derived on the basis of multichannel-analyzer profiles. Clin 845 Chem 1986;32:76-79. 846 Solberg HE. Approved recommendation (1986) on the theory of reference values. Part 1. 847 The concept of reference values. Clin Chim Acta 1987;165:111-118. 848 Solberg HE. Approved recommendation (1987) on the theory of reference values. Part 5. 849 Statistical treatment of collected reference values. Determination of reference limits. Clin 850 Chim Acta 1987;170:S13-S32. 851 Solberg HE. Approved recommendation (1988) on the theory of reference values. Part 3. 852 Preparation of indivdiduals and collection of specimens for the production of reference 853 values. Clin Chim Acta 1988;177:S1-S12. 854 Solberg HE, Lahti A Detection of outliers in reference distributions: performance of 855 Horn's algorithm. Clin Chem 2005;51(12):2326-32. 856 Solberg HE, Stamm D. IFCC recommednation: The theory of reference values. Part 4. 857 Control of analytical variation in the production, transfer and application of reference 858 values. J Automat Chem 1991;13(5):231-234. 859 Stephan C, Wesseling S, Schink T, Jung K. Comparison of eight computer programs 860 for receiver-operating characteristic analysis. Clin Chem 2003;49(3):433-439. 861 Walton RN. Establishing reference intervals: Health as a relative concept. Seminars in 862 Avian and Exotic Pet Medicine; 2001; 10(2):66-71. 38 MASTER COPY 10/18/10 863 Wiinberg B, Jensen AL, Kjelgaard-Hansen M, et al. Study on biological variation of 864 haemostatic parameters in clinical healthy dogs. Vet J 2007;174:62-68. 865 Zweig, MH. Assessment of the clinical accuracy of laboratory tests using receiver 866 operating characterisitic (ROC) plots; Approved Guideline, Jan. 1995. CLSI/NCCLS 867 Document GP10-a. NCCLS, 940 W Valley Road, Suite 1400, Wayne, Pennsylvania 868 19087, USA 869 870 39 MASTER COPY 10/18/10 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 Figure 1. Procedural flow chart for de novo determination of RI for new methods or new populations. LITERATURE SEARCH ↓ DEFINE REFERENCE POPULATION and ESTABLISH SELECTION, INCLUSION, AND EXCLUSION CRITERIA ↓ DEVELOP QUESTIONNAIRE ↓ DETERMINE NUMBER OF REFERENCE INDIVIDUALS AVAILABLE or REQUIRED for REFERENCE LIMITS with SUFFICIENTLY NARROW CONFIDENCE INTERVALS ↓ SELECT REFERENCE INDIVIDUALS by DIRECT METHODS ↓ COLLECT and HANDLE SAMPLES IN STANDARDIZED MANNER ↓ ANALYZE SAMPLES USING WELL-CONTROLLED METHODS ↓ PREPARE HISTOGRAM ↓ IDENTIFY OUTLIERS ↓ DETERMINE DISTRIBUTION OF REFERENCE SAMPLES (Gaussian or nonGausian). IF USING PARAMETRIC METHODS, TRANSFORM DATA and RETEST DISTRIBUTION. ↓ CALCULATE REFERENCE LIMITS USING an APPROPRIATE STATISTICAL METHOD BASED ON DISTRIBUTION of DATA and NUMBER OF SAMPLES ↓ CALCULATE CONFIDENCE INTERVALS FOR THE UPPER and LOWER REFERENCE LIMITS ↓ DETERMINE THE NEED FOR PARTITIONING IF THERE ARE SUFFICIENT SAMPLE NUMBERS ↓ DOCUMENT ALL PREVIOUS STEPS for a COMPREHENSIVE REFERENCE INTERVAL REPORT 40 MASTER COPY 10/18/10 911 Table 1. Criteria for the selection or partitioning of reference individuals. Selection criteria Biological Clinical Geographical Examples Exclusion criteria Biological Age e.g., neonate, juvenile, adult Sex e.g., female, male, altered Breed History of health or Physiologic illness Preventative drug history e.g., vaccines, routine anthelmintics Physical examination Further diagnostic evaluation e.g., parasitic testing Husbandry e.g., farmed, free-living, diet Coastal Medications Temperate Mountain Specific state or region Ambient temperature 912 913 41 Examples Metabolic e.g., fasted or non-fasted, intense exercise, high stress Cell damage e.g., traumatic venipuncture, physical or chemical restraint Illness Medications Lactation Pregnancy Hormones or growth promoters Enzyme induction e.g., corticosteroids, antiseizure drugs MASTER COPY 10/18/10 914 915 916 Table 2. Recommended procedures for establishing RI based on reference sample size and distribution Sample size Data distribution (innate or transformed) Not applicable ≥ 120 Gaussian 20 ≤ x <120 Non-Gaussian Gaussian 10 ≤ x < 20 917 918 919 920 921 922 Statistical method Nonparametric with 90% CI Robust with 90% CI Parametric with 90% CI Robust with 90% CI (preferred) Nonparametrica Robust with 90% CIb Parametric with 90% CIb Robust with 90% CI Not recommended Non-Gaussian Not applicable < 10 Confidence interval (CI) a Cannot determine 90% CI with <120 reference sample b Include the following information: histogram, mean or median, minimum and maximum Table 3. Information to include in documenting or publishing RI studies. Item Explanation Demographics of reference Geographic location population Source of reference individuals/samples Species and breed(s) Number of individuals Age and gender distribution Husbandry (housing, diet, vaccines, parasite control, etc.) Determinants of health status Other details if pertinent Preanalytical methods Patient preparation Sample collection method Sample handling and processing Time/season of collection if pertinent Analytical methods Analyzer Methodology and reagents Quality specifications Quality control reagents and procedures Method of data analysis Histogram Outlier identification Evaluation of distribution Definition of interval (e.g. central 95%, 2.5th and 97.5th fractile limits) Interval determination (e.g., parametric, nonparametric, robust) Confidence interval 42 MASTER COPY 10/18/10 923 43