Chapter 9 - Lipids and Membranes • Lipids are essential components of all living organisms • Lipids are water insoluble organic compounds • They are hydrophobic (nonpolar) or amphipathic (containing both nonpolar and polar regions) Prentice Hall c2002 Chapter 9 1 Fig 9.1 Structural relationships of major lipid classes Prentice Hall c2002 Chapter 9 2 Fatty Acids • Fatty acids - R-COOH (R=hydrocarbon chain) are components of triacylglycerols, glycerophospholipids, sphingolipids • Fatty acids differ from one another in: (1) Length of the hydrocarbon tails (2) Degree of unsaturation (double bond) (3) Position of the double bonds in the chain • • • • • Nomenclature of fatty acids Most fatty acids have 12 to 20 carbons Most chains have an even number of carbons IUPAC nomenclature: carboxyl carbon is C-1 Common nomenclature: a,b,g,d,e etc. from C-1 Carbon farthest from carboxyl is w Prentice Hall c2002 Chapter 9 3 Fig 9.2 Table 9.1 Prentice Hall c2002 Chapter 9 4 Structure and nomenclature of fatty acids • Saturated - no C-C double bonds • Unsaturated - at least one C-C double bond • Monounsaturated - only one C-C double bond • Polyunsaturated - two or more C-C double bonds Double bonds in fatty acids • Double bonds are generally cis • Position of double bonds indicated by Dn, where n indicates lower numbered carbon of each pair • Shorthand notation example: 20:4D5,8,11,14 (total # carbons : # double bonds, D double bond positions) Prentice Hall c2002 Chapter 9 5 Fig. 9.3 Structures of three C18 fatty acids (a) Stearate (octadecanoate) (b) Oleate (cis-D9-octadecenoate) (c) Linolenate (all-cis-D9,12,15octadecatrienoate) • The cis double bonds produce kinks in the tails of unsaturated fatty acids Prentice Hall c2002 Chapter 9 6 Fig 9.4 Structures of stearate, oleate, linolenate Prentice Hall c2002 Chapter 9 7 Triacylglycerols • Fatty acids are stored as neutral lipids, triaclyglycerols (TGs) Fats have 2-3 times the energy of proteins or carbohydrates • TGs are 3 fatty acyl residues esterified to glycerol • TGs are hydrophobic, stored in fat cells (adipocytes) Fig 9.5 Structure of a triacylglycerol Prentice Hall c2002 Chapter 9 8 Fig. 9.8a Structure of glycerophospholipids Phosphatidylethanolamine (PE) Prentice Hall c2002 Chapter 9 9 Fig. 9.8b Structures of glycerophospholipids Phosphatidylserine (PS) Prentice Hall c2002 Chapter 9 10 Fig. 9.8c Structures of glycerophospholipids Phosphatidylcholine (PC) Prentice Hall c2002 Chapter 9 11 Fig 9.9 Phospholipases hydrolyze phospholipids Prentice Hall c2002 Chapter 9 12 Fig 9.10 Structure of an ethanolamine plasmalogen • Plasmalogens - C-1 hydrocarbon substituent attached by a vinyl ether linkage (not ester linkage) Prentice Hall c2002 Chapter 9 13 Sphingolipids • Sphingolipids - sphingosine is the backbone abundant in central nervous system tissues • Ceramides - fatty acyl group linked to C-2 of sphingosine by an amide bond • Sphingomyelins - phosphocholine attached to C-1 of ceramide • Cerebrosides - glycosphingolipids with one monosaccharide residue attached via a glycosidic linkage to C-1 of ceramide • Galactosylcerebrosides - a single b-D-galactose as a polar head group • Gangliosides - contain oligosaccharide chains with N-acetyl-neuraminic acid (NeuNAc) attached to aChapter ceramide Prentice Hall c2002 9 14 Fig 9.11 (a) Sphingosine (b) Ceramides (c) Sphingomyelin Prentice Hall c2002 Chapter 9 15 Fig 9.12 • Structure of a galactocerebroside Prentice Hall c2002 Chapter 9 16 Fig 9.13 Ganglioside GM2 (NeuNAc in blue) Prentice Hall c2002 Chapter 9 17 Steroids • Classified as isoprenoids - related to 5-carbon isoprene (found in membranes of eukaryotes) • Steroids contain four fused ring systems: 3-six carbon rings (A,B,C) and a 5-carbon D ring • Ring system is nearly planar • Substituents point either down (a) or up (b) Fig 9.14 Prentice Hall c2002 Isoprene Chapter 9 Fig 9.15 18 Fig 9.15 Structures of several steroids Prentice Hall c2002 Chapter 9 19 Fig 9.15 Structures of several steroids Prentice Hall c2002 Chapter 9 20 Cholesterol • Cholesterol modulates the fluidity of mammalian cell membranes • It is also a precursor of the steroid hormones and bile salts • It is a sterol (has hydroxyl group at C-3) • The fused ring system makes cholesterol less flexible than most other lipids Prentice Hall c2002 Chapter 9 21 Cholesterol esters • Cholesterol is converted to cholesteryl esters for cell storage or transport in blood • Fatty acid is esterified to C-3 OH of cholesterol • Cholesterol esters are very water insoluble and must be complexed with phospholipids or amphipathic proteins for transport Fig 9.17 Cholesteryl ester Prentice Hall c2002 Chapter 9 22 Waxes • Waxes are nonpolar esters of long-chain fatty acids and long chain monohydroxylic alcohols • Waxes are very water insoluble and high melting • They are widely distributed in nature as protective waterproof coatings on leaves, fruits, animal skin, fur, feathers and exoskeletons Fig 9.18 Myricyl palmitate, a wax Prentice Hall c2002 Chapter 9 23 Eicosanoids • Eicosanoids are oxygenated derivatives of C20 polyunsaturated fatty acids (e.g. arachidonic acid) • Prostaglandin E2 - can cause constriction of blood vessels • Thromboxane A2 - involved in blood clot formation • Leukotriene D4 - mediator of smooth-muscle contraction and bronchial constriction seen in asthmatics • Aspirin alleviates pain, fever, and inflammation by inhibiting cyclooxygenase (COX), an enzyme critical for the synthesis of prostaglandins. (NSAID family of compounds) Prentice Hall c2002 Chapter 9 24 Fig 9.19 Arachidonic acid and eicosanoid derivatives Prentice Hall c2002 Chapter 9 25 Lipid vitamins • Vitamins A,D,E, and K are isoprenoid derivatives Vitamin E Prentice Hall c2002 Chapter 9 26 Biological Membranes Are Composed of Lipid Bilayers and Proteins • Biological membranes define the external boundaries of cells and separate cellular compartments • A biological membrane consists of proteins embedded in or associated with a lipid bilayer Prentice Hall c2002 Chapter 9 27 Several important functions of membranes • Some membranes contain protein pumps for ions or small molecules • Some membranes generate proton gradients for ATP production • Membrane receptors respond to extracellular signals and communicate them to the cell interior Lipid Bilayers • Lipid bilayers are the structural basis for all biological membranes • Noncovalent interactions among lipid molecules make them flexible and self-sealing • Polar head groups contact aqueous medium • Nonpolar tails point toward the interior Prentice Hall c2002 Chapter 9 28 Fig 9.21 Membrane lipid and bilayer Prentice Hall c2002 Chapter 9 29 Fluid Mosaic Model of Biological Membranes • Fluid mosaic model - membrane proteins and lipids can rapidly diffuse laterally or rotate within the bilayer (proteins “float” in a lipid-bilayer sea) • Membranes: ~25-50% lipid and 50-75% proteins • Lipids include phospholipids, glycosphingolipids, cholesterol (in some eukaryotes) • Compositions of biological membranes vary considerably among species and cell types Prentice Hall c2002 Chapter 9 30 Fig 9.22 Structure of a typical eukaryotic plasma membrane Prentice Hall c2002 Chapter 9 31 Lipid Bilayers and Membranes Are Dynamic Structures Fig 9.23 (a) Lateral diffusion is very rapid (b) Transverse diffusion (flip-flop) is very slow Prentice Hall c2002 Chapter 9 32 Fig 9.25 Freeze-fracture electron microscopy, distribution of membrane proteins Prentice Hall c2002 Chapter 9 33 Fig 9.22 Structure of a typical eukaryotic plasma membrane Prentice Hall c2002 Chapter 9 34 Three Classes of Membrane Proteins (1) Integral membrane proteins Contain hydrophobic regions embedded in the lipid bilayer • Usually span the bilayer completely (2) Peripheral membrane proteins • Associated with membrane through charge-charge or hydrogen bonding interactions to integral proteins or membrane lipids • More readily dissociated from membranes than covalently bound proteins • Change in pH or ionic strength often releases these proteins (3) Lipid-anchored membrane proteins • Tethered to membrane through a covalent bond to a lipid Prentice Hall c2002 Chapter 9 35 Fig 9.22 Structure of a typical eukaryotic plasma membrane Prentice Hall c2002 Chapter 9 36 Membrane Transport • Three types of integral membrane protein transport: (1) Channels and pores (2) Passive transporters (3) Active transporters Prentice Hall c2002 Chapter 9 37 Table 9.3 Characteristics of membrane transport Prentice Hall c2002 Chapter 9 38 Pores and Channels • Pores and channels are transmembrane proteins with a central passage for ions and small molecules • Solutes of appropriate size, charge, and molecular structure can diffuse down a concentration gradient • Process requires no energy • Central passage allows molecules and ions of certain size, charge and geometry to transverse the membrane. • Figure 9.30 Prentice Hall c2002 Chapter 9 39 Passive Transport • Passive transport (facilitated diffusion) does not require an energy source • Protein binds solutes and transports them down a concentration gradient Types of passive transport systems • Uniport - transporter carries only a single type of solute • Some transporters carry out cotransport of two solutes, either in the same direction (symport) or in opposite directions (antiport) Prentice Hall c2002 Chapter 9 40 Fig 9.31 • Types of passive transport (a) Uniport (b) Symport (c) Antiport Prentice Hall c2002 Chapter 9 41 Fig 9.32 Kinetics of passive transport • Initial rate of transport increases until a maximum is reached (site is saturated) Prentice Hall c2002 Chapter 9 42 Active Transport • Transport requires energy to move a solute up its concentration gradient • Transport of charged molecules or ions may result in a charge gradient across the membrane Types of active transport • Primary active transport is powered by a direct source of energy as ATP, light or electron transport • Secondary active transport is driven by an Prentice Hall c2002 Chapter 9 43 ion concentration gradient Fig 9.34 Secondary active transport in E. coli • Oxidation of Sred generates a transmembrane proton gradient • Movement of H+ down its gradient drives lactose transport (lactose permease) Prentice Hall c2002 Chapter 9 44 Fig 9.35 Secondary active transport in animals: Na+-K+ ATPase • Na+ gradient (Na+-K+ATPase) drives glucose transport Prentice Hall c2002 Chapter 9 45 Endocytosis and Exocytosis • Cells import/export molecules too large to be transported via pores, channels or proteins by: • Endocytosis - macromolecules are engulfed by plasma membrane and brought into the cell inside a lipid vesicle • Exocytosis - materials to be excreted from the cell are enclosed in vesicles that fuse with the plasma membrane Prentice Hall c2002 Chapter 9 46 Transduction of Extracellular Signals • Specific receptors in plasma membranes respond to external chemicals (ligands) that cannot cross the membrane: hormones, neurotransmitters, growth factors • Signal is passed through membrane protein transducer to a membrane-bound effector enzyme • Effector enzyme generates a second messenger which diffuses to intracellular target Prentice Hall c2002 Chapter 9 47 Fig 9.37 General mechanism of signal transduction across a membrane Prentice Hall c2002 Chapter 9 48 OUT IN Fig 9.43 • Summary of the adenyl cyclase signaling Prentice Hall c2002 pathway Chapter 9 49