Variation and Inheritance WJEC Biology Module 1 2011 Specification Variation WJEC Biology Module 1 2011 Specification Learning Outcomes Examine the variation in height/length in individuals of the same species by collecting and analysing data and know that variation may be due to environmental or genetic causes. Understand that variation may be continuous or discontinuous. Keywords Clones Fertilisation Inheritance Chromosome Exposure Gamma rays Mutation Ultraviolet radiation X-rays Continuous Discontinuous Environmental factors Genes Mutation Phenotype Variation Sexual reproduction Asexual reproduction Variation Look at variation in the class Try to write down at least 20 ways in which individuals vary from one another. Variation Variation can be described as either Continuous variation a range of measurements from one extreme to the other. E.g. height Discontinuous variation individuals fall into distinct categories. E.g. ability to roll the tongue; attached or free ear lobes Continuous variation Use a tally chart and plot results in a histogram Discontinuous variation Plot results in a bar chart Variation Differences in the characteristics of different individuals of the same kind may be due to differences in The genes they have inherited – genetic causes The conditions in which they have developed – environmental causes Variation is normally a combination of both genes and the environment. Phenotype The phenotype is the outward appearance of an organism It depends on both the organism’s genes and its environment. Variation in Snails - Practical Snails of two closely related species of Cepaea are common in woodland and grassland in Britain. They show a pattern of variation known as polymorphism. This means that there are several different ‘types’. The shell may be either yellow or pink/brown, and it may have dark stripes or be plain. So, the four types of the snails are as follows: Pink/brown, plain Yellow, plain Pink/brown, striped Yellow striped Even within each type, there is variation, so that the pink/brown variety may be distinctly pink, or brown, or even greyish, and the striped forms may have different numbers of stripes, for instance. Variation in Snails - Practical Pick 50 snails at random for the grassland Use the table to create a tally chart recording the number of each type of snail found in the grassland Write your results onto the main table Calculate the percentage of each snail type Repeat the stages above for woodland snails Conclusion 1. What differences do you notice in the distribution of the different types of snail? Describe any trends seen. [2] 2. Describe one difficulty in the method that might have reduced the accuracy of the results [1] 3. The size of the sample can affect the accuracy of the results. In using a sample, do you think a sample size of 50 was big enough? Give a reason for your answer Evaluation Plan a similar activity to find out if the snails grow bigger in woodland or grassland. Describe, in detail, the procedure you would use. Suggest any difficulties you may have in obtaining valid results Suggest how these difficulties may be avoided. Learning Outcome Understand that sexual reproduction leads to offspring that are genetically different from the parents unlike asexual reproduction where genetically identical offspring called clones are produced from a single parent. Sexual reproduction therefore gives rise to increased variation. Genetic Variation Sexual reproduction Egg and sperm fuse at fertilisation, to form a zygote The zygote has a set of genes from the mother and a set from the father. Offspring are genetically different from their parents Asexual reproduction No fertilisation, no mixing of genes Offspring are genetically identical to each other and the parents Produces clones Cloning Cloning can be used to mass produce economically important organisms Animals IVF – In vitro fertilisation Plants micropropagation Prep WJEC Science Page 34 What are continuous and discontinuous variation? Question 1 Inheritance WJEC Biology Module 1 2011 Specification Learning outcomes Understand that genes are sections of DNA molecules that determine inherited characteristics and are in pairs. Genes have different forms, called alleles. Know that chromosomes are linear arrangements of genes and that chromosomes that are found in pairs in body cells are strands of DNA. DNA contains coded information for the production of different types of proteins. These proteins determine how cells function. Chromosomes and Genes Our cells contain genetic information this is your DNA. This information on DNA is in units called genes. Our genes are on chromosomes. Chromosomes always come in pairs in our body cells. Genetics and DNA Each chromosome is made up of thousands of genes; the genes carry genetic information that affects how we grow and what we look like. A chromosome is made up of a long thread, made up of deoxyribonucleic acid (DNA). One gene is made up of a short length of DNA. DNA DNA is twisted into a double helix, where bases pair up: Adenine with thymine Guanine with cytosine Every 3 bases along the strand codes for a particular amino acid, this means that DNA controls the proteins that are made DNA and Genetics GCSE Practical What is DNA? DNA is packed tightly into chromosomes inside the cell, it is a gigantic molecule, very long but very thin. DNA from a single cell can be 2 metres long, but is so thin that it can hardly be seen with a powerful microscope. When DNA is released from cells it clumps together to form strands, which are colourless and jelly like. Extraction of DNA from cells is the first step in many experiments in genetic engineering. DNA can be extracted from both plant and animal cells. How to extract DNA from kiwi fruit! Equipment Kiwi fruit White tile Scalpel Tap water Warm water 600C Ice cold ethanol Washing up liquid Coffee filters Plastic measuring cylinders Funnels 250ml beaker Boiling tube Boiling tube bung Method – Stage 1 DNA extraction mixture: Finely chop the kiwi fruit and place in boiling tube. Mix 10ml washing up liquid + 3g salt + 100ml water in a 250ml beaker add DNA extraction mixture Place bung on top and shake carefully. Leave for fifteen minutes at 60oC Method – Stage 2 Filter the mixture through the coffee filter into a 100ml beaker to separate the chopped kiwi fruit from the clear liquid. (the DNA is invisible as it is dissolved in the clear liquid) Transfer 5 ml of the clear liquid into a clean test tube. Add 5ml of cold (4oC) absolute alcohol down the side of the tube. DNA will appear as “fluffy” white solid. Final “tricky” stage The DNA can be pulled out using a fine wire. Learning Outcomes be able to understand and complete Punnett squares and explain the outcomes of monohybrid crosses including ratios. The following terms should be understood: genotype, phenotype, dominant, recessive, F1, F2, selfing, heterozygous, heterozygote, homozygous and homozygote An understanding of simple Mendelian ratios. Inheritance Things to remember: Chromosomes are strings of genes and chromosomes occur in pairs in each cell. There are two copies of each gene in each cell These genes may be identical or may be different versions (alleles) of the same gene. Glossary Homozygous Heterozygous 2 different alleles for a particular characteristic Genotype 2 identical alleles for a particular characteristic alleles for a particular characteristic Phenotype outward effect of those alleles Glossary Dominant allele which controls the development of a characteristic when it is present on only one chromosome. Recessive allele which control the development of a characteristic if present on both chromosomes. Further definitions F1 – first generation F2 – second generation Selfing Manually pollinating a flower by placing its pollen on its own stigma Self pollination Monohybrid Inheritance The study of how a single gene is passed on from parents to offspring. A punnet square can be used to predict an outcome Genetic Cross - Tips When you write out a genetic cross, make sure you state what the symbols represent Make sure you label each line in the cross (phenotype, genotype, etc) It is a good idea to circle the gametes to show that meiosis has happened Read the question carefully – are you asked to state the outcome in terms of the genotype or the phenotype? A cross between a pure-breeding tall pea plant and a pure-breeding dwarf pea plant A cross between two F1 pea plants A cross between a heterozygous tall pea plant and a dwarf pea plant Now try this ……. You need to be able to predict the genotypes of the parents from descriptions of them. Work out the following genotypes, based on peas that can be round or wrinkled, with round being dominant to wrinkled. A heterozygous round pea A wrinkled pea A pure-breeding round pea Learning Outcomes Understand that most characteristics are controlled by more than one gene. consider the scientific process of observation, experimentation and deduction that led Gregor Mendel to propose the mechanism of inheritance. Discuss why the significance of the work was not recognised and validated by scientists for many years. Gregor Mendel Gregor Mendel was a monk who did experiments looking at the inheritance of height in pea plants. He did not publish any of his results in scientific journals, so no one took any notice of his work during his lifetime. He is now regarded as one of the greatest scientists of all time. Learning Outcome know that in human body cells, one of the pairs of chromosomes, XX or XY, carries the genes which determine sex. These separate and combine randomly at fertilisation. Inheritance of Sex in humans The sex chromosomes X and Y determine the sex of an individual Males Females XY XX The presence of the Y chromosome results in male features developing Inheritance of sex Learning Outcomes understand that when gametes are formed the chromosome number is halved and the genetic composition of the daughter cells is not identical (the term, meiosis, and knowledge of stages are not required). Fertilisation restores normal chromosome number. Chromosomes and Genes Human body cells have 23 pairs of chromosomes. This gives a diploid number (2n) of 46. Human gametes contains 23 chromosomes, this is the haploid number (n). Pupil Activity Copy and complete the following sentences. Another name for sperm and egg cells is . These sex cells join to make one cell, the _____________. This cell grows into a foetus by ___________ many times. Each body cell in the baby contains pairs of chromosomes. One of the chromosomes in each pair comes from the , the other chromosome in each pair comes from the . Human Life Cycle Diploid Zygote 46 fertilisation Cell Division Number of chromosomes Mitosis Haploid Sperm 23 Haploid Egg 23 Meiosis Adult 46 Learning Outcomes understand that new genes result from changes, mutations, in existing genes and that mutations occur at random. Most mutations have no effect but some may be beneficial or harmful. Mutation rates can be increased by ionising radiation. (Reference to specific ionising radiation is not required.) Mutations A mutation is a change in the structure of a gene Mutations are Rare Random They can have No effect beneficial effects If a mutation improves the “design” of an organism this can lead to increased survival. harmful effects Causes of Mutations Mutations can occur naturally Mutations rate can be increased by Ionising radiation X-rays chemicals Learning Outcomes understand that some mutations cause conditions which may be passed on in families, as is shown by the mechanism of inheritance of cystic fibrosis, and be able to interpret family trees. Inherited Diseases Genetic diseases can be caused by: Dominant or recessive alleles on normal chromosomes E.g. cystic fibrosis (recessive), Huntington’s Chorea (dominant) Recessive genes on X chromosome E.g. haemophilia Cystic Fibrosis This is the commonest inherited disease among white people; it affects one in every 2000 children. In a person with the disease thick, sticky mucus builds up in respiratory passages and digestive glands, making the person susceptible to infection and disrupting digestion. Cystic Fibrosis This is a disorder of cell membranes; it is caused by a recessive allele of a gene. It must be inherited from both parents. As it is a recessive allele parents may be carriers of the disorder without actually having the disorder themselves. Pupil Activity Let N = normal allele Let n = allele for cystic fibrosis Carry out the following crosses and work out the chances of a child having cystic fibrosis for each cross. Nn x Nn NN x Nn Pupil Activity Cystic fibrosis and family tree w/sheet Learning Outcomes Discuss the issues surrounding the development and use of gene therapy which has been tried as a means to alleviate the symptoms in cystic fibrosis sufferers but has greater potential as advances are made in knowledge and technology. Learning Outcome understand that an organism's DNA can be analysed by 'genetic profiling' and how this can be used to show the similarity between two DNA samples. The process involves cutting the DNA into short pieces which are then separated into bands. The pattern of the bands produced can be compared to show the similarity between two DNA samples, for instance in criminal cases, paternity cases and in comparisons between species for classification purposes. Advances in technology now make such analysis widely available. Genetic Profiling Genetic profiling is a method by which an organism's DNA can be analysed this can be used to show the similarity between two DNA samples. The process involves cutting the DNA into short pieces These are then separated into bands. The pattern of the bands produced can be compared to show the similarity between two DNA samples Stages in genetic profiling Collect a sample of cells E.g. blood, hair follicles, semen, skin Break cells up and extract DNA Enzymes are used to break the DNA into segments of differing sizes. Gel Electrophoresis DNA fragments are placed on a gel Electric current is passed through the gel Smaller fragments move further through the gel The pattern that develops is the genetic profile. Learning Outcome Discuss the benefits of DNA profiling, for example to identify the presence of certain genes which may be associated with a particular disease. As this likelihood may be based on statistical probability, understand that it raises issues such as risk-benefit considerations and disclosure of information along with wider ethical issues of ownership and human rights which are subject to value judgement by society. Uses of Genetic Profiling A genetic profile is a pattern of bands or lines It is unique to each individual and can be used to identify an individual person. For example Identification of a suspect in a crime Identification of a dead body Look for genetic relations Maternity Paternity Species identification for classification Is genetic profiling a good thing? What are the benefits of DNA profiling? to identify the presence of certain genes which may be associated with a particular disease. Problems with this As this likelihood may be based on statistical probability understand that it raises issues which are subject to value judgment by society. risk-benefit considerations disclosure of information along with wider ethical issues of ownership human rights Learning Outcomes know that genes can be transferred artificially from one species to another. Genetic Modification Genetic modification is the process by which a gene is taken from a chromosome of one species and put into a chromosome of another species For example Genes inserted into crop plants so that they produce an insecticide, making the plants resistant to pests Learning Outcomes Understand that the introduction of genes from herbicide-resistant plants into soya bean plants, so increasing their resistance to herbicides, may increase the crop yield due to reduced competition. Herbicide resistance A common feature of genetically modified crops is resistance to herbicide. A herbicide resistant gene is transferred from a soil bacteria and transferred to Soya bean plants Advantages of herbicide resistance in Soya Increases herbicide resistance, so farmers can kill weeds without damaging crop plants Removing weeds reduces competition for the crop improving crop yield Learning Outcomes Understand the potential disadvantages and issues involved. GM Crops and developing countries Advantages Crops tailor made to suit the farming conditions More nutritional value Higher income Energy-producing crops could save natural resources Disadvantages GM crops in developed countries mean that they no longer need to import from abroad – developing countries lose trade Mismanagement and political reasons Problems with GM Crops All issues raised with GM crops raise important political, ethical and trade questions. Learning Outcomes investigate and evaluate the potential benefits and problems posed by advances in GM crop technology Understand the need to collect reliable data, e.g. the use of farm scale field trials, in order that possible effects on the environment and on health should be understood. The data may be used to help formulate policy decisions regarding the planting of these crops and to inform consumers. Learning Outcomes Understand the need for unbiased information and interpretation as it affects the public perception of foods containing GM products and informs risk management considerations of possible consequences. Activity Read through the sources provided Comment on whether these sources are biased or unbiased Make notes on any facts that you think are important Write a short evaluation on the advantages and disadvantages of GM Crops