Flies are quick! The fly body plan: each segment has a unique identity and produces distinctive structures 3 head 3 thorax 8 abdomen Model Organisms: Drosophila • small (adult < 5 mm long). Can keep hundreds in a small vial. • short generation time - 8 days • embryo develops outside the body in a short time - so can easily study development • history - scientists have been doing genetics and collecting mutations for many years (since 1910) • very cheap to keep • reproducible anatomy • segmentation visible • many anatomical, developmental, & behavioral similarities to vertebrates Small Genome = 120 Mb Thomas Hunt Morgan and the white eye mutant wildtype fly white mutant Christiane Nüsslein-Volhard and Eric Wieschaus used genetics to identify proteins that set up the embryonic body plan wildtype Wieschaus and Nüsslein-Volhard looked for mutants that affect the fly body plan The fruit fly body plan is self-assembled in 24 hours: how is it specified? Anterior-Posterior Pattern Formation in Flies Maternal effect genes Figure 6.17 Maternal effect genes establish the anterior/posterior axis of the embryo nurse cells Oocyte Anterior Determinant bicoid mRNA Posterior Determinant nanos mRNA bicoid protein accumulates in a gradient head tail A P 100 Level of bicoid 0 Remember that cleavage starts without cell division in Drosophila (superficial cleavage) Fig. 9.1 Syncytial specification: specification by interactions between cytoplasmic regions rather than cells A gradient of the bicoid transcription factor turns on different genes at different "thresholds" bicoid Gene A- turned on only by high level of bicoid Gene B- turned on only by intermediate level of bicoid Gene C- turned off by bicoid and thus only on where bicoid is absent bicoid mutants have no head!! wildtype larva bicoid mutant Figure 6.24 The “bicoid target genes” are known as the gap genes Hunchback Krüppel Knirps Expression pattern of proteins encoded by gap genes Gap gene mutants are missing different regions of the body The gap genes depend on each other to form boundaries and provide identity to unique regions where they overlap Hunchback Krüppel Fig. 6.17 The transcription factors encoded by gap genes cooperate to create even more complex patterns of gene expression Expression domain of Hunchback Expression domain of Krüppel The expression domains of Hunchback and Krüppel overlap Some genes require both Hunchback and Krüppel present to be turned on Pair-rule genes, such as Even-skipped, refine the segments See Fig. 6.17D for beautiful localization of another pair-rule gene, Fushi tarazu The segment-polarity gene Engrailed is activated by the Even-skipped and Fushi tarazu pair-rule transcription factors Figure 6.33 Anterior-Posterior Pattern Formation in Flies Maternal effect genes Figure 6.17 wildtype Antennapedia mutant See Fig. 6.37 for a close-up of an Antennapedia mutant Ed Lewis was far ahead of his time … Fig. 6.35 Wildtype Ultrabithorax mutant Figure 6.36 Is Ubx is expressed at the right time and place to make T3 different from T2? Yes! Ubx is expressed in T3 and A1 Experiment #1 Does Ultrabithorax bind DNA and regulate genes specific for T3 and A1? Experiment #2 Ultrabithorax is expressed in the region of the embryo that will become the 3rd thoracic and 1st abdominal segments In these segments, the Ultrabithorax protein acts as a transcription factor, turning on genes specific for the 3rd thoracic and 1st abdominal segments ON OFF T1 specific gene T3 specific gene ON A1 specific gene OFF A5 specific gene The Homeotic genes in Drosophila ANT-C BX-C Fig 6.35 Antennapedia expression is negatively regulated by the Bithorax complex homeotic proteins ANT-C BX-C Fig 6.35 All abdominal segments take on a T2 identity if the bithorax complex is deleted Wildtype Ubx abdA AbdB triple mutant T2 T3 A1 T2 T2 T2 A8 T2 Bithorax complex homeotic proteins ANT-C BX-C Fig 6.35 Ultrabithorax, abdA, and AbdB normally repress expression of the thorax-specific “leg gene” Distalless in the abdominal segments wild-type T1 T2 T3 Ubx abdA AbdB triple mutant abdomen Lewis hypothesized that the duplication and diversification of homeotic master regulators underlies the evolution of an increasingly complex body plan The human body is also built up from reiterated units (segments) with different identities along the A/P axis Mammals also have homeotic genes expressed at different places along the A/P axis Mouse homeotic genes also encode homeodomain transcription factors that act as master regulators of segment identity Hox 3.1 is expressed in the region of the embryo that will become the 12th and 13th ribs In these segments, Hox 3.1 protein acts as a transcription factor that turns on genes specific for the 12th and 13th ribs ON OFF 4th rib specific gene 12th rib specific gene ON 13th rib specific gene OFF 15th rib specific gene Notch and the competition to be a neuron The story of the epidermal vs. neural cell fate decision in Drosophila They started as one big happy ectodermal epithelium… I feel the need to be a neuroblast! then one of their number got some big ideas and started to ingress inside… you guys stay here and keep up the good work! as it left, it sent a message to its neighbors, telling them to stick with the epidermal fate When the story takes a turn for the worse … the fly neurogenic mutants (mastermind, big brain, notch, delta) Some cells become neuroblasts and signal their neighbors to remain epidermis If signal is missing... all cells eventually ingress and become neuroblasts Nervous system Epidermis Extra nervous system No epidermis! Cells lacking signal behave differently than cells lacking receptor Thanks, I + + + + + + + + + + needed that! + + + + + If mutant cells lack signal, + mutant + mutant + + they can be rescued by wild type mutant + neighbors which make signal. + + + + + + + + + + What? I can't hear you! + + + + + + mutant + mutant + + mutant + + + + + + + + + If mutant cells lack receptor, they cannot be rescued by wild type neighbors which make signal. Cells lacking signal behave differently than cells lacking receptor Thanks, I + + + + + + + + + + needed that! + + + + + + mutant + mutant + + mutant + + + + + + + + + + + DELTA mutant cells can be rescued by wild type neighbors. Therefore, DELTA must be the SIGNAL. What? I can't hear you! + + + + + + mutant + mutant + + mutant + + + + + + + + + NOTCH mutant cells cannot be rescued by wild type neighbors. Therefore, NOTCH must be the Receptor. neuroblast epidermis After binding Delta, the cytoplasmic domain of Notch undergoes proteolytic cleavage Figure 3.33 neuroblast epidermal-specific genes