Using Sickle Cell Disease as a tool to gain an understanding of the inheritance of traits • Caused by an abnormal a gene • Affects red blood cells • Hemoglobincarries oxygen from the lungs to all parts of the body. • It is an inherited blood disorder • Both parents have to have it to pass on the abnormal gene • If you inherit the problem gene from one parent and a normal gene from the other • ‘Sickle cell trait' or be a Carrier •Doesn't usually cause any symptoms • Can be passed on to the next generation. • • • • • • • Homozygous • Heterozygous • Dominant • Recessive • Wildtype • Carrier • Punnet • Square • Pedigree • Chromosome Gene Genetics P generation F1s F2s Hybrids Mendel? • For every pregnancy when both parents have sickle trait, there is a 1in 4 chance that their offspring will have sickle cell anemia. • Red blood cells are donut-shaped and flexible • In people with SC the cells are hard and sickle shaped • Block small blood vessels • Stop oxygen • This blockage causes pain • Protein • Primary component of red blood cells • Composed of four sub-units • Each carries one oxygen molecule • People with sickle cell have abnormal hemoglobin • Do not last in the circulatory system and • Breakdown quickly • Causing anemia (low hemoglobin) • Liver struggles to get rid waste • Symptoms: • • • • • • • • Tired and pale Jaundice Gallstones causing tummy pain Kidney problems Hip and joint pain Stroke Heart attack Sudden death Pain, Persistence, Family: Sickle Cell Disease • Amino Acid • Alpha-globin • Anemia • Beta-globin • Complication • Hemoglobin • Prognosis • Protein • Sickle cell • Symptom • Trait • Step Up the Beat! • Alek Blandford, Makailah Cecil, Dakota Edgell and Akeel Kalik • Dissipating the Smoke • Amber Howard, Elizabeth Hurm and Lucy Kurtz • herOes • Andrew McIntosh, Cole Tapp, Tyler White • SOS Project • Emily Linn, Elaine Leslie, Kanyon Tapp and Makayla Claiborne • River Run for Fun • Kaleb Deker, Trey Kinison, Kristina Canary and Candace Young • Drop that Cigarette • Emma Fitzgerald, Harsh Moolani and Sonal Muthalali • Helping Complete the Puzzle • Marissa McDaniel, Wade Hall and Chance Meeks • Kickball Tournament to Fight Obesity • Braden Johnson, Nate Martin, Eric Schwender and Harrison Spain Thanks to our EXPERTS! 1. Perform the HerOs skit at a minimum of two area elementary schools, in front of approximately 300-500 students total. • Scheduling will immediately commence when our grant is accepted. • We will visit two schools at minimum and add additional schools as money and time allow. 2. Distribute HerOs pamphlets to each student who views our performance. The pamphlet will include: • Facts on obesity; • Active alternatives to watching TV or playing video games; and • Easy snack ideas kids can make themselves or request from their parents. 3. Preceding and following each performance we will administer a very short survey to gauge our ability to inform our audience. • It is our hope that the 60% of our audience will demonstrate increased knowledge concerning obesity. What resources do we have? • Anyone’s parents sew? Hand-made superhero costumes? • Work with TWO on the skit? • Anyone’s parents work at elementary schools? • Any printing resources? • What other resources do we have (list): • Acting in the Skit • Scheduling with Elementary Schools • Writing/Directing the Skit • Creating the Brochure • Props/Costumes for the Skit • Prizes • Activity 4.1.3 Due TODAY! • Activity 4.1.4 Due Monday: Pick 2! • Epidemiologist • Clinical Laboratory Technician • Hematologist • PBS Sickle Cell Link (Video) • A bit on evolution…. What were Darwin’s Main ideas anyway??? 1. Species change over time 2. Living species have arisen from earlier life forms (descending from a common ancestor) Darwin’s main ideas Close ties between organisms and their environments* Can be traced back to the ancient Greeks Evolution is the greatest unifying theme in biology, and The Origin of Species fueled an explosion in biological research and knowledge that continues today. Evolutionary theory continues to expand beyond Darwin’s basic ideas. Nonetheless, few contributions in all of science have explained so much, withstood as much repeated testing over the years, and stimulated as much other research as those of Darwin. • Natural Selection 1. Produce more offspring than the environment can support 2. Individuals of a population vary in their characteristics 3. Many characteristics can be inherited 4. Beneficial characteristics are preferentially passed down • Darwin found convincing evidence for his ideas in the results of artificial selection • With humans playing the role of the environment Hundreds to thousands of years of breeding (artificial selection) Ancestral dog (wolf) Throughout Human Evolution • The best genes survive from one generation to next • Why do we still have some deleterious genetic mutations? • Various mutations have provided a benefit • Extra Iron • Sickle Cell • We continue to see these mutations in modern day humanity even when the benefit no longer exists (leftover) • The Immortal Story of Henrietta Lacks • The first cell line, cultured more than 60 years ago • The HeLa Cell-Line has been reproducing independently, fueling biological research • Bioethics- The study of controversial ethics brought about by advances in biological or medical research • Two sides of the argument • Henerietta’s • Dr. Gey’s • Prep time • Design opening and closing statement • Make THREE KEY arguments • Plan a defense against your opponent • H: Opening statement (1 minutes) • G: Opening statement (1 minutes) • H: Key Point 1(one minute) • G: rebuttal • H: rebuttal • G: Key Point 1(one minute) • H: rebuttal • G: rebuttal • H: Key Point 2 (one minute) • G: rebuttal • H: rebuttal • G: Key Point 2 (one minute) • H: rebuttal • G: rebuttal • H: Key Point 3 (one minute) • G: rebuttal • H: rebuttal • G: Key Point 3 (one minute) • H: rebuttal • G: rebuttal • H: Closing (one minute) • G: Closing (one minute) 1. How does someone get sickle cell disease? 2. Can sickle cell disease spread from one person to another the same way as a cold or the flu? 3. How are diseases inherited from parents? 4. What are examples of human diseases that are inherited? • • • • • • • • Chromosome Dominant trait Gene Heredity Mutation Pedigree Sex Chromosome Recessive trait • How does analyzing pedigrees help doctors, epidemiologists, researchers, and other scientists understand how diseases are inherited? • Essential Questions • 8. How are pedigrees used to track diseases? • 9. Why does sickle cell disease run in families, yet is not present in every generation? • How does analyzing pedigrees help doctors, epidemiologists, researchers, and other scientists understand how diseases are inherited? • Essential Questions • 8. How are pedigrees used to track diseases? • 9. Why does sickle cell disease run in families, yet is not present in every generation? • Career Journals: Due Friday (pick 1) • Clinical Geneticist • Genetic Counselor • Biostatistician • When • Tuesday, Feb 12th 6-7PM • Where? • In the ATC Builiding (across from our building) • What will I do? • Mingle with perspective students, chat and answer questions about the LSA and our class • OPTION: to speak for 2-3 minutes • Sign Here: Denote with (s) if you’d like to speak! • Essential Question 10 • How can doctors and genetic counselors calculate the probability of a child inheriting a disease? • Don’t forget 4.2.7 Career Journal is due FRIDAY! • What do we know about inheritance of traits and chromosomes? • How do chromosomes carry all the information we need to be alive? • Essential Questions 1. 2. What are chromosomes made of? What is DNA? • Meiosis Video • Activity 4.3.1 • • • • Pull from curriculum Start with number #19 Skip #20 Conclusion questions (on separate sheet) due tomorrow! • Essential Questions 3 and 4 • 3. What is the relationship between chromosomes, DNA, and genes? • 4. Does every cell in an organism have the same DNA? • Key Terms • Adenine • Buffer • Cytosine • Gene • Guanine • Helix • Histone • Hydrogen bond • Lysis • Model • Nucleotide • Thymine • Supernatant Essential Question 5. How do scientists isolate DNA in order to study it? • Located in the cell’s nucleus. • Humans have 23 pairs. • Inherit one of each of the 23 types of chromosomes from each parent. • Passed to new generation in sperm and egg cells. • Inherited diseases are passed to new generation on chromosomes. • Chromosome Structure • Each chromosome consists of a single molecule of deoxyribonucleic acid (DNA). • Basic chromosomal structure is the same in all cells that contain a nucleus. • Chromosome Function • Contains the code or instructions for how to make specific proteins which then determine the organism’s traits. • The specific instructions for a protein are on sections of the chromosome called genes. • Chromosome 11 carries the instructions (genes) to make the hemoglobin protein. • There are different versions of these genes: • Normal--healthy • Mutated or changed-Sickle cell or other hemoglobin disorder. • A section of DNA that corresponds to a discreet unit of heredity • Information needed to make a specific polypeptide (chain of amino acids) • Proteins that are a single polypeptide are usually associated with a single gene • Proteins that consist of multiple polypeptides are associated with multiple genes 3. What is the relationship between chromosomes, DNA, and genes? 4. Does every cell in an organism have the same DNA? • • • • • What are the 3 components of a nucleotide? What are the names of the four nucleotides? Which nucleotides are purines? Which nucleotides are pyrimidines? What holds the two strands of DNA together? • “Zoom In On Your Genome” • • • • • • • • • • • • • Adenine Buffer Cytosine Gene Guanine Helix Histone Hydrogen bond Lysis Model Nucleotide Thymine Supernatant • Why didn’t we see the double helix? • Essential Question • 6. How much DNA is in a single human cell? • If all the DNA in our body was linked endto-end, how long would the molecule be?” • http://web2.0calc.com • 1 Angstrom = 1 x 10-10 meter • 1 nanometer = 1 x 10-9 meters • 10 Angstroms = 1 nanometer • The rhinovirus = 20nm in size = 200Ao • Each DNA nucleotide pair = 3.4Ao • The diameter of 200Ao = the length of 59 base pairs (200Ao ∕ 3.4 Ao) • http://web2.0calc.com • How big is a single molecule of DNA? If we lined up ALL the DNA in a typical human it would… • Reach the moon and back • 260,000 times • From earth to sun and back • 70 times! • From the sun to Pluto and back • 17 times • How does it all fit? • Powers of Ten • Review • Essential Questions • 5. What is a chromosome? • 6. What is a mutation? • 7. How many chromosomes do humans normally have? • How many chromosomes will we see in the HeLa cells? • Class Chart • On board and in your notes • Acting in the Skit • Scheduling with Elementary Schools • Writing/Directing the Skit • Creating the Brochure • Props/Costumes for the Skit • Prizes • Writing/Directing the Skit (work with Prop/Costumers) • How many skits? • Basic ideas • Rough outline of tasks • Props/Costumes for the Skit (work with Writers) • What props? • What costumes? • Look up costume prices • Scheduling with Elementary Schools • How will we pick? • Factors to consider • Contacts? • Creating the Brochure • Outline tasks • Outline brochure BONUS: 1) What type of image is this? 2) If all the DNA in our body was linked end-to-end, how long would the molecule be (in km)? Spread 1 Cole’s Tyler’s Elaine’s Emily’s Amber’s MEAN Spread 2 Spread 3 Mean • Cell lysis buffer- Lyse cell membranes • Detergent- Break apart lipids and proteins • Salt- Increase solute concentration OUTSIDE of the cell • Baking soda- Sodium bicarbonate controls pH- it’s a “buffer” • Ethanol- Less polar than water • Adding ethanol to solution disrupts the charges by water • If enough ethanol is added, the electrical attraction between phosphate groups and any positive ions present in solution becomes strong enough to form stable ionic bonds and DNA precipitation 1. What is the length in angstroms of a single average human DNA molecule? • • • 2. The number of nucleotide pairs in a single human DNA molecule is 1.5 x 108. The length of one nucleotide pair in a DNA helix is 3.4 angstroms. The average length of a single human DNA molecule is (1.5 x 108) x 3.4 = 5.1 x 108 angstroms. What is the length in micrometers (um) of a single average human DNA molecule? • • • • 3. 1 angstrom = 10-10 m The average length of a single human DNA molecule is (5.1 x 108 Ao) x 10-10 m/Ao = 5.1 x 10-2 meters. 1 ,000,000 micrometer = 1m or 1 x 106 um= 1m The average length of a single human DNA molecule is (5.1 x 10-2 m) x 106 micrometers/m = 5.1 x 104 micrometers. How does the length of a single average DNA molecule compare to the diameter of a human nucleus and of a human cell? • • • A single DNA molecule averages 5.1 x 104 micrometers in length The average diameter of a human nucleus is 5 micrometers So the DNA molecule is 10,000 times larger. 4. If all the DNA molecules in a single human cell were connected end-to-end, how long would the resulting molecule be? • One way is to use the average length of a DNA molecule. The average length is 5.1 x 104 micrometers and there are 46 DNA molecules in a human cell • (5.1 x 104 micrometers) x 46 = 2.35 x 106 micrometers. This is equal to 2.35 meters. • The second way is to use the estimated number of nucleotide pairs. The estimated number of nucleotide pairs is 6 x 109 and each nucleotide pair is 3.4 angstroms in length. • (6 x 109) x 3.4 Ao = 2.0 x 1010 Ao, which is equal to 2 meters. • Activity 4.3.5 Careers that Involve the Study of DNA • Molecular Biologist • Evolutionary Biologist • Complete Activity 4.4.1 (will give you tomorrow) • Need Internet access • Answer conclusion questions in depth • Complete (as much as possible) the Crossword Puzzles • 4.1 & 4.2 • 4.3 - 4.5 (will give you tomorrow) • Essential Questions • • • • • 1. What is a gene? 2. What is the DNA code? 3. What is the connection between genes and proteins? 4. How are proteins produced in a cell? 5. How does the sequence of nucleotides in DNA determine the sequence of amino acids in a protein? DNA Monomer used to form it Shape of macromolecule Location in the cell Function in the cell Role in disease Proteins oAmino group oCarboxyl group oCodon oExon oGene oHydrophilic oHydrophobic oHydroxyl group oIntron oMessenger RNA (mRNA) oMutation oNucleotide oPrimary Structure oQuaternary Structure oRibonucleic Acid (RNA) oRibosome oSecondary Structure oTertiary Structure oTranscription oTransfer RNA (tRNA) oTranslation 4.4.1 Essential Questions 6. What determines the shape of a protein? 7. Is the shape of a protein affected by its surrounding environment? 4.4.1 • The sequence of amino acids • joined by peptide bonds • comprise the primary structure • The properties of the amino acids • in the cellular environment • Determine formation of the higher-level structure 4.4.1 4.4.2 • Writing/Directing the Skit (work with Prop/Costumers) • How many skits? • Basic ideas • Rough outline of tasks • Props/Costumes for the Skit (work with Writers) • What props? • What costumes? • Look up costume prices • Scheduling with Elementary Schools • How will we pick? • Factors to consider • Contacts? • Creating the Brochure • Outline tasks • Outline brochure What if a doctor wanted to change something about a particular protein. What about that protein would need to change? • Essential Questions 8. If the DNA code is changed, does the shape of a protein change? 9. Can changing just one nucleotide in a gene change the shape of a protein? 10. Is it possible to design proteins that have specific characteristics? 11. How are proteins designed? • Not genetic- occur during cellular replication and growth • Rare, random event that can not be predicted • Cri-du-chat • A portion of chromosome number 5 breaks off • Occurs in about 1 out every 40,000 or 50,000 births • If there was a test that could detect problems with chromosomes, would you have the test done on yourself, or if you were pregnant would you have the fetus tested • Trisomy 13- Patau syndrome, three copies of chromosome 13 • Trisomy 18- Edwards syndrome, three copies of chromosome18 or when a segment of chromosome 18 attaches to a different chromosome. • Essential Questions • 1. Can a person with 45 or 48 chromosomes survive? • 2. What happens if someone has more or fewer than 46 chromosomes? • 3. How can doctors detect if a patient has an abnormal number of chromosomes? • Key Terms • • • • • • • Dominant trait Hydrophilic Hydrophobic Karyotype Mutation Recessive trait Polymerize • Most chromosomal mistakes are deleterious in utero • Smaller mutations do not show on a karyotype- leaqd to genetic disease • Types of genetic diseases (learn these) • • • • • • • Tay Sachs Hemophilia Cystic Fibrosis Huntington’s Disease Polycystic Kidney Disease Hemachromatosis Sickle Cell Disease • Essential Questions • 4. • 5. • 6. Can changing a single nucleotide in a gene cause a disease? How is sickle cell hemoglobin different from normal hemoglobin? What DNA mutations are directly linked to inherited diseases? • Single mutation in the 400 nucleotides that code for beta-globin (A to T) • Changes code for 6th amino acid in the B-globin protein from GAG to GTG (valine to glutamic acid) • Causes hemoglobin molecule to polemerize and ditirts the shape of the red blood cell