Biotrophic Pathogens
Pathogens that can only feed on a living host and must keep the host and its cells alive are termed biotrophic pathogens.
Sedentary ecto- and endoparasitic nematodes are in this category, for example, species of
Meloidogyne, Heterodera, Xiphinema, Tylenchulus, Rotylenchulus .
Nematodes that withdraw contents from individual cells and then move to new feeding sites are considered cell grazers.
Innate Immunity
Most plants are resistant to most pathogens; they have highly effective immune systems.
Host defense mechanisms may be as extreme as programmed cell death, the hypersensitive response.
All biotrophic pathogens must suppress host defenses. The feeding site must be induced without host detection or without induction of host defenses.
Following establishment of the feeding site by sedentary nematodes, it must be maintained for up to 5 or 6 weeks to allow the nematode to achieve its reproductive potential. That time scale is much greater than that required by many bacterial and fungal pathogens of plants.
Failure to establish and maintain the feeding site may prevent reproduction and therefore is catastrophic to the nematode genotype. Consequently, there is strong selection pressure on nematodes to suppress host defenses.

Plant Defenses a. Pre-existing Defenses – Basal Resistance
Structural – cuticle, wax, wall thickness, spines that suppress penetration of cells.
Chemical-phenolic and other compounds that inhibit or kill invading organisms.
b. Systemic Induced Resistance
(i) PAMP Signals
Organisms attempting to feed on plant cells, or to invade plant tissues, betray their presence with recognizable molecular signals on their surfaces. Such signals are termed pathogen associated molecular patterns (PAMPs) and are recognized by pattern recognition receptors on cell surfaces.
Chitins in fungal cell walls are PAMPS which trigger immunity responses (pathogen-triggered immunity – PTI). The PAMP signals of nematodes are unknown; chitin is not present in the cuticle although it does occur in egg shells and perhaps in the stylet.
(ii) DAMP Signals
Another set of signals that may trigger PTI responses in plants are cell-degradation products resulting from damage caused by the invasion, damage-associated molecular patterns
(DAMPs).

(iii) The Defense Mechanisms
Plants characteristically deposit callose to strengthen cell walls at the point of invasion, including at the point of nematode stylet insertion.
PAMP-triggered PTI, the first line of defense, may involve production of salicylic acid (SA) as a signal to invoke defense mechanisms including callose thickening of cell walls and suppression of active oxygen defense responses (H
2
O
2
, superoxide) which may initiate localized programmed cell death – the hypersensitive response.
Also, pathogen invasion triggers the jasmonic acid signaling pathway (JA) which stimulates production of protease inhibitors and the release of toxins.

Induced Resistance
JA = jasmonic acid
SA = salicylic acid
ISR = Induced Systemic Resistance
SAR = Systemic Acquired Resistance
PR = Pathogenesis-Related genes
> peroxidase and catalase

Effector Suppression of Plant Defenses and PTI
Invading bacteria and fungi, and probably nematodes, release effector molecules into plant cells to suppress PTI and render the plant susceptible to infection or invasion.
PAMP-triggered PTI may result in production of salicylic acid (SA) as a signal to invoke defense mechanisms. In that case, successful nematode infections would involve suppression of SA production, reduction of callose thickening of cell walls and suppression of active oxygen defense responses (H
2
O
2
, superoxide), and the hypersensitive response of localized programmed cell death.
SA signaling is possibly disrupted by chorismate mutase produced in the esophageal glands. In the PTI signaling pathway, chorismate is converted to salicylic acid. Chorismate mutase from the nematode reduces chorismate and thus SA, so defense mechanisms are not triggered.
Incidentally, like cellulases, chorismate mutase is an example of horizontal gene transfer from bacteria. Nematodes are the only metazoan with the enzyme.
An alternative mechanism of PTI suppression by nematodes is the production of effectors which cause ubiquitin to attach to plant signal proteins and thus reduce their levels and effectiveness in triggering PTI responses.

the evolution of plant parasitism bacteria
Rhabditoidea Cephaloboidea horizontal gene transfer- HGT cellulases – GHF5- glycoside hydrolase family chorismate mutase
Tylenchoidea

the evolution of plant parasitism
Aphelenchoidea fungus horizontal gene transfer- HGT cellulases – GHF45- glycoside hydrolase family
Bursaphelenchus xylophilus

The Evolutionary Response: Effector-triggered Immunity
The evolution of effector suppression of PTI has resulted in evolution of immune receptors, with a nucleotide-binding domain and a leucine-rich domain (NB-LRR), in plants that recognize the effector molecules and activate effector-triggered immunity (ETI).
However, successful pathogens have evolved next-generation effectors that suppress ETI.
Plants have responded with more specific ETIs and the evolutionary treadmill continues.
PTI responses to PAMPs and DAMPs are relatively general in their effect but higher level
ETIs are progressively more specific to individual pathogens.
The cyclical evolutionary process of plant-nematode interactions with regard to plant immunity and susceptibility is depicted by the zig-zag-zig model (Jones and Dangl, 2006).
Initially PAMPs trigger PTI which reduces susceptibility. Then nematodes develop effectors that suppress PTI and plants evolve immunity responses to the effectors.

Mechanisms of Effector-triggered Immunity
In effect, the sources of specific ETIs are resistance genes. Thus, the Mi gene of tomato codes for receptors to the ETS effector molecules introduced by root-knot nematodes to suppress plant defenses and facilitate the development of feeding sites.
However, although they are known for some other pathogens, the nematode ETS molecules have not yet been determined and are the focus of several active research programs. One possible candidate is the 30C02 effector protein of Heterodera glycines which may be involved in active suppression of host defenses (Hamamouch et al., 2012).
Although the nature of nematode ETS products has still to be determined, the hypersensitive response of cells to the activated ETI effectively disrupts the feeding and development of sedentary endoparasitic nematode species.

Suppression and Avoidance of Host Defenses
Nematodes are protected by the cuticle and surface coat.
The surface coat of lipid and protein molecules is shed as the nematode moves, shedding bacteria but also confusing the plants as to its whereabouts.
Glutathione peroxidases on surface coats of nematodes reduce active oxygen plant defenses.
Many plant-parasitic nematodes produce glutathione S tranferases that detoxify endogenous toxic molecules.
Nematodes also produce superoxide dismutase that breaks down active oxygen plant defenses

References
Hamamouch, N., Li, C., Hewezi, T., Baum, T.J., Mitchum, M.G., Hussey, R.S., Vodkin, L.O., Davis, E.L. 2012. The interaction of the novel 30C02 cyst nematode effector protein with a plant b-1,3-endoglucanase may suppress host defence to promote parasitism. Journal of Experimental
Botany.
Huang, G., Dong, R., Allen, R., Davis, E.L., Baum, T.J., Hussey, R.S. 2005. Two chorismate mutase genes from the root-knot nematode
Meloidogyne incognita. Molecular Plant Pathology 6:23-30.
Jones, J.D.G, Dangl, J.L. 2006. The plant immune system. Nature 444:323-329.
Jones, J.T., Gheysen, G. and Fenoll, C. (eds) 2011. Genomics and molecular genetics of plant-nematode interactions. Springer Academic
Publishers.
Jones, J.T. 2012. Lectures in the EUMAINE program, University of Ghent.
Jones, J.T., Furlanetto, C., Bakker, E., Banks, B., Blok, V., Chen, Q., Phillips, M. and Prior, A. 2003. Characterization of a chorismate mutase from the potato cyst nematode Globodera pallida. Molecular Plant Pathology 4:43–50.
Lambert, K.N., Allen, K.D. and Sussex, I.M. 1999. Cloning and characterization of an esophageal-gland-specific chorismate mutase from the phytoparasitic nematode Meloidogyne javanica. Molecular Plant-Microbe Interactions 12:328–336.
Smant, G., Jones, J. 2011. Suppression of plant defences by nematodes. Chapter 13, pp 273-286. In Jones, J., Gheysen, G., Fenoll, C. (eds).
Genomics and Molecular Genetics of Plant-Nematode Interactions. Springer, NY.