NoSQL and Big Data Processing Hbase, Hive and Pig, etc. Adopted from slides by By Perry Hoekstra, Jiaheng Lu, Avinash Lakshman, Prashant Malik, and Jimmy Lin History of the World, Part 1 • Relational Databases – mainstay of business • Web-based applications caused spikes – Especially true for public-facing e-Commerce sites • Developers begin to front RDBMS with memcache or integrate other caching mechanisms within the application (ie. Ehcache) Scaling Up • • • • • Issues with scaling up when the dataset is just too big RDBMS were not designed to be distributed Began to look at multi-node database solutions Known as ‘scaling out’ or ‘horizontal scaling’ Different approaches include: – Master-slave – Sharding Scaling RDBMS – Master/Slave • Master-Slave – All writes are written to the master. All reads performed against the replicated slave databases – Critical reads may be incorrect as writes may not have been propagated down – Large data sets can pose problems as master needs to duplicate data to slaves Scaling RDBMS - Sharding • Partition or sharding – – – – Scales well for both reads and writes Not transparent, application needs to be partition-aware Can no longer have relationships/joins across partitions Loss of referential integrity across shards Other ways to scale RDBMS • Multi-Master replication • INSERT only, not UPDATES/DELETES • No JOINs, thereby reducing query time – This involves de-normalizing data • In-memory databases What is NoSQL? • Stands for Not Only SQL • Class of non-relational data storage systems • Usually do not require a fixed table schema nor do they use the concept of joins • All NoSQL offerings relax one or more of the ACID properties (will talk about the CAP theorem) Why NoSQL? • For data storage, an RDBMS cannot be the be-all/end-all • Just as there are different programming languages, need to have other data storage tools in the toolbox • A NoSQL solution is more acceptable to a client now than even a year ago – Think about proposing a Ruby/Rails or Groovy/Grails solution now versus a couple of years ago How did we get here? • Explosion of social media sites (Facebook, Twitter) with large data needs • Rise of cloud-based solutions such as Amazon S3 (simple storage solution) • Just as moving to dynamically-typed languages (Ruby/Groovy), a shift to dynamically-typed data with frequent schema changes • Open-source community Dynamo and BigTable • Three major papers were the seeds of the NoSQL movement – BigTable (Google) – Dynamo (Amazon) • Gossip protocol (discovery and error detection) • Distributed key-value data store • Eventual consistency – CAP Theorem (discuss in a sec ..) The Perfect Storm • Large datasets, acceptance of alternatives, and dynamicallytyped data has come together in a perfect storm • Not a backlash/rebellion against RDBMS • SQL is a rich query language that cannot be rivaled by the current list of NoSQL offerings CAP Theorem • Three properties of a system: consistency, availability and partitions • You can have at most two of these three properties for any shared-data system • To scale out, you have to partition. That leaves either consistency or availability to choose from – In almost all cases, you would choose availability over consistency The CAP Theorem Availability Consistency Partition tolerance The CAP Theorem Once a writer has written, all readers will see that write Availability Consistency Partition tolerance Consistency • Two kinds of consistency: – strong consistency – ACID(Atomicity Consistency Isolation Durability) – weak consistency – BASE(Basically Available Soft-state Eventual consistency ) ACID Transactions • A DBMS is expected to support “ACID transactions,” processes that are: – Atomic : Either the whole process is done or none is. – Consistent : Database constraints are preserved. – Isolated : It appears to the user as if only one process executes at a time. – Durable : Effects of a process do not get lost if the system crashes. 16 Atomicity • A real-world event either happens or does not happen – Student either registers or does not register • Similarly, the system must ensure that either the corresponding transaction runs to completion or, if not, it has no effect at all – Not true of ordinary programs. A crash could leave files partially updated on recovery 17 Commit and Abort • If the transaction successfully completes it is said to commit – The system is responsible for ensuring that all changes to the database have been saved • If the transaction does not successfully complete, it is said to abort – The system is responsible for undoing, or rolling back, all changes the transaction has made 18 Database Consistency • Enterprise (Business) Rules limit the occurrence of certain real-world events – Student cannot register for a course if the current number of registrants equals the maximum allowed • Correspondingly, allowable database states are restricted cur_reg <= max_reg • These limitations are called (static) integrity constraints: assertions that must be satisfied by all database states (state invariants). 19 Database Consistency (state invariants) • Other static consistency requirements are related to the fact that the database might store the same information in different ways – cur_reg = |list_of_registered_students| – Such limitations are also expressed as integrity constraints • Database is consistent if all static integrity constraints are satisfied 20 Transaction Consistency • A consistent database state does not necessarily model the actual state of the enterprise – A deposit transaction that increments the balance by the wrong amount maintains the integrity constraint balance 0, but does not maintain the relation between the enterprise and database states • A consistent transaction maintains database consistency and the correspondence between the database state and the enterprise state (implements its specification) – Specification of deposit transaction includes balance = balance + amt_deposit , (balance is the next value of balance) 21 Dynamic Integrity Constraints (transition invariants) • Some constraints restrict allowable state transitions – A transaction might transform the database from one consistent state to another, but the transition might not be permissible – Example: A letter grade in a course (A, B, C, D, F) cannot be changed to an incomplete (I) • Dynamic constraints cannot be checked by examining the database state 22 Transaction Consistency • Consistent transaction: if DB is in consistent state initially, when the transaction completes: – All static integrity constraints are satisfied (but constraints might be violated in intermediate states) • Can be checked by examining snapshot of database – New state satisfies specifications of transaction • Cannot be checked from database snapshot – No dynamic constraints have been violated • Cannot be checked from database snapshot 23 Isolation • Serial Execution: transactions execute in sequence – Each one starts after the previous one completes. • Execution of one transaction is not affected by the operations of another since they do not overlap in time – The execution of each transaction is isolated from all others. • If the initial database state and all transactions are consistent, then the final database state will be consistent and will accurately reflect the real-world state, but • Serial execution is inadequate from a performance perspective 24 Isolation • Concurrent execution offers performance benefits: – A computer system has multiple resources capable of executing independently (e.g., cpu’s, I/O devices), but – A transaction typically uses only one resource at a time – Hence, only concurrently executing transactions can make effective use of the system – Concurrently executing transactions yield interleaved schedules 25 begin trans .. op1,1 .. op1,2 .. commit Concurrent Execution T1 op1,1 op1.2 sequence of db operations output by T1 local computation op1,1 op2,1 op2.2 op1.2 T2 op2,1 op2.2 DBMS interleaved sequence of db operations input to DBMS local variables 26 Durability • The system must ensure that once a transaction commits, its effect on the database state is not lost in spite of subsequent failures – Not true of ordinary programs. A media failure after a program successfully terminates could cause the file system to be restored to a state that preceded the program’s execution 27 Implementing Durability • Database stored redundantly on mass storage devices to protect against media failure • Architecture of mass storage devices affects type of media failures that can be tolerated • Related to Availability: extent to which a (possibly distributed) system can provide service despite failure • Non-stop DBMS (mirrored disks) • Recovery based DBMS (log) 28 Consistency Model • A consistency model determines rules for visibility and apparent order of updates. • For example: – – – – – – – – Row X is replicated on nodes M and N Client A writes row X to node N Some period of time t elapses. Client B reads row X from node M Does client B see the write from client A? Consistency is a continuum with tradeoffs For NoSQL, the answer would be: maybe CAP Theorem states: Strict Consistency can't be achieved at the same time as availability and partition-tolerance. Eventual Consistency • When no updates occur for a long period of time, eventually all updates will propagate through the system and all the nodes will be consistent • For a given accepted update and a given node, eventually either the update reaches the node or the node is removed from service • Known as BASE (Basically Available, Soft state, Eventual consistency), as opposed to ACID The CAP Theorem Availability Consistency Partition tolerance System is available during software and hardware upgrades and node failures. Availability • Traditionally, thought of as the server/process available five 9’s (99.999 %). • However, for large node system, at almost any point in time there’s a good chance that a node is either down or there is a network disruption among the nodes. – Want a system that is resilient in the face of network disruption The CAP Theorem Availability Consistency Partition tolerance A system can continue to operate in the presence of a network partitions. The CAP Theorem Availability Consistency Partition tolerance Theorem: You can have at most two of these properties for any shared-data system What kinds of NoSQL • NoSQL solutions fall into two major areas: – Key/Value or ‘the big hash table’. • • • • • Amazon S3 (Dynamo) Voldemort Scalaris Memcached (in-memory key/value store) Redis – Schema-less which comes in multiple flavors, column-based, document-based or graph-based. • • • • • Cassandra (column-based) CouchDB (document-based) MongoDB(document-based) Neo4J (graph-based) HBase (column-based) Key/Value Pros: – – – – very fast very scalable simple model able to distribute horizontally Cons: - many data structures (objects) can't be easily modeled as key value pairs Schema-Less Pros: - Schema-less data model is richer than key/value pairs - eventual consistency - many are distributed - still provide excellent performance and scalability Cons: - typically no ACID transactions or joins Common Advantages • Cheap, easy to implement (open source) • Data are replicated to multiple nodes (therefore identical and fault-tolerant) and can be partitioned – Down nodes easily replaced – No single point of failure • • • • Easy to distribute Don't require a schema Can scale up and down Relax the data consistency requirement (CAP) What am I giving up? • • • • • joins group by order by ACID transactions SQL as a sometimes frustrating but still powerful query language • easy integration with other applications that support SQL Big Table and Hbase (C+P) Data Model • A table in Bigtable is a sparse, distributed, persistent multidimensional sorted map • Map indexed by a row key, column key, and a timestamp – (row:string, column:string, time:int64) uninterpreted byte array • Supports lookups, inserts, deletes – Single row transactions only Image Source: Chang et al., OSDI 2006 Rows and Columns • Rows maintained in sorted lexicographic order – Applications can exploit this property for efficient row scans – Row ranges dynamically partitioned into tablets • Columns grouped into column families – Column key = family:qualifier – Column families provide locality hints – Unbounded number of columns Bigtable Building Blocks • GFS • Chubby • SSTable SSTable Basic building block of Bigtable Persistent, ordered immutable map from keys to values Sequence of blocks on disk plus an index for block lookup Stored in GFS Can be completely mapped into memory Supported operations: Look up value associated with key Iterate key/value pairs within a key range 64K block 64K block 64K block SSTable Index Source: Graphic from slides by Erik Paulson Tablet Dynamically partitioned range of rows Built from multiple SSTables Tablet 64K block Start:aardvark 64K block 64K block End:apple SSTable Index Source: Graphic from slides by Erik Paulson 64K block 64K block 64K block SSTable Index Table Multiple tablets make up the table SSTables can be shared Tablet aardvark Tablet apple SSTable SSTable Source: Graphic from slides by Erik Paulson apple_two_E SSTable SSTable boat Architecture • Client library • Single master server • Tablet servers Bigtable Master • Assigns tablets to tablet servers • Detects addition and expiration of tablet servers • Balances tablet server load • Handles garbage collection • Handles schema changes Bigtable Tablet Servers • Each tablet server manages a set of tablets – Typically between ten to a thousand tablets – Each 100-200 MB by default • Handles read and write requests to the tablets • Splits tablets that have grown too large Tablet Location Upon discovery, clients cache tablet locations Image Source: Chang et al., OSDI 2006 Tablet Assignment • Master keeps track of: – Set of live tablet servers – Assignment of tablets to tablet servers – Unassigned tablets • Each tablet is assigned to one tablet server at a time – Tablet server maintains an exclusive lock on a file in Chubby – Master monitors tablet servers and handles assignment • Changes to tablet structure – Table creation/deletion (master initiated) – Tablet merging (master initiated) – Tablet splitting (tablet server initiated) Tablet Serving “Log Structured Merge Trees” Image Source: Chang et al., OSDI 2006 Compactions • Minor compaction – Converts the memtable into an SSTable – Reduces memory usage and log traffic on restart • Merging compaction – Reads the contents of a few SSTables and the memtable, and writes out a new SSTable – Reduces number of SSTables • Major compaction – Merging compaction that results in only one SSTable – No deletion records, only live data Bigtable Applications • • • • Data source and data sink for MapReduce Google’s web crawl Google Earth Google Analytics Lessons Learned • Fault tolerance is hard • Don’t add functionality before understanding its use – Single-row transactions appear to be sufficient • Keep it simple! HBase is an open-source, distributed, column-oriented database built on top of HDFS based on BigTable! HBase is .. • A distributed data store that can scale horizontally to 1,000s of commodity servers and petabytes of indexed storage. • Designed to operate on top of the Hadoop distributed file system (HDFS) or Kosmos File System (KFS, aka Cloudstore) for scalability, fault tolerance, and high availability. Benefits • Distributed storage • Table-like in data structure – multi-dimensional map • High scalability • High availability • High performance Backdrop • Started toward by Chad Walters and Jim • 2006.11 – Google releases paper on BigTable • 2007.2 – Initial HBase prototype created as Hadoop contrib. • 2007.10 – First useable HBase • 2008.1 – Hadoop become Apache top-level project and HBase becomes subproject • 2008.10~ – HBase 0.18, 0.19 released HBase Is Not … • Tables have one primary index, the row key. • No join operators. • Scans and queries can select a subset of available columns, perhaps by using a wildcard. • There are three types of lookups: – Fast lookup using row key and optional timestamp. – Full table scan – Range scan from region start to end. HBase Is Not …(2) • Limited atomicity and transaction support. – HBase supports multiple batched mutations of single rows only. – Data is unstructured and untyped. • No accessed or manipulated via SQL. – Programmatic access via Java, REST, or Thrift APIs. – Scripting via JRuby. Why Bigtable? • Performance of RDBMS system is good for transaction processing but for very large scale analytic processing, the solutions are commercial, expensive, and specialized. • Very large scale analytic processing – Big queries – typically range or table scans. – Big databases (100s of TB) Why Bigtable? (2) • Map reduce on Bigtable with optionally Cascading on top to support some relational algebras may be a cost effective solution. • Sharding is not a solution to scale open source RDBMS platforms – Application specific – Labor intensive (re)partitionaing Why HBase ? • HBase is a Bigtable clone. • It is open source • It has a good community and promise for the future • It is developed on top of and has good integration for the Hadoop platform, if you are using Hadoop already. • It has a Cascading connector. HBase benefits than RDBMS • No real indexes • Automatic partitioning • Scale linearly and automatically with new nodes • Commodity hardware • Fault tolerance • Batch processing Data Model • Tables are sorted by Row • Table schema only define it’s column families . – – – – Each family consists of any number of columns Each column consists of any number of versions Columns only exist when inserted, NULLs are free. Columns within a family are sorted and stored together • Everything except table names are byte[] • (Row, Family: Column, Timestamp) Value Column Family Row key TimeStamp value Members • Master – – – – Responsible for monitoring region servers Load balancing for regions Redirect client to correct region servers The current SPOF • regionserver slaves – Serving requests(Write/Read/Scan) of Client – Send HeartBeat to Master – Throughput and Region numbers are scalable by region servers Architecture ZooKeeper • HBase depends on ZooKeeper and by default it manages a ZooKeeper instance as the authority on cluster state The -ROOT- table holds the list of .META. table regions Operation The .META. table holds the list of all user-space regions. Installation (1) START Hadoop… $ wget http://ftp.twaren.net/Unix/Web/apache/hadoop/hbase/hbase0.20.2/hbase-0.20.2.tar.gz $ sudo tar -zxvf hbase-*.tar.gz -C /opt/ $ sudo ln -sf /opt/hbase-0.20.2 /opt/hbase $ sudo chown -R $USER:$USER /opt/hbase $ sudo mkdir /var/hadoop/ $ sudo chmod 777 /var/hadoop Setup (1) $ vim /opt/hbase/conf/hbase-env.sh export JAVA_HOME=/usr/lib/jvm/java-6-sun export HADOOP_CONF_DIR=/opt/hadoop/conf export HBASE_HOME=/opt/hbase export HBASE_LOG_DIR=/var/hadoop/hbase-logs export HBASE_PID_DIR=/var/hadoop/hbase-pids export HBASE_MANAGES_ZK=true export HBASE_CLASSPATH=$HBASE_CLASSPATH:/opt/hadoop/conf $ cd /opt/hbase/conf $ cp /opt/hadoop/conf/core-site.xml ./ $ cp /opt/hadoop/conf/hdfs-site.xml ./ $ cp /opt/hadoop/conf/mapred-site.xml ./ <configuration> <property> <name> name </name> <value> value </value> </property> </configuration> Setup (2) Name value hbase.rootdir hdfs://secuse.nchc.org.tw:9000/hbase hbase.tmp.dir /var/hadoop/hbase-${user.name} hbase.cluster.distributed true hbase.zookeeper.property 2222 .clientPort hbase.zookeeper.quorum Host1, Host2 hbase.zookeeper.property /var/hadoop/hbase-data .dataDir Startup & Stop $ start-hbase.sh $ stop-hbase.sh Testing (4) $ hbase shell > create 'test', 'data' 0 row(s) in 4.3066 seconds > list test 1 row(s) in 0.1485 seconds > put 'test', 'row1', 'data:1', 'value1' 0 row(s) in 0.0454 seconds > put 'test', 'row2', 'data:2', 'value2' 0 row(s) in 0.0035 seconds > put 'test', 'row3', 'data:3', 'value3' 0 row(s) in 0.0090 seconds > scan 'test' ROW COLUMN+CELL row1 column=data:1, timestamp=1240148026198, value=value1 row2 column=data:2, timestamp=1240148040035, value=value2 row3 column=data:3, timestamp=1240148047497, value=value3 3 row(s) in 0.0825 seconds > disable 'test' 09/04/19 06:40:13 INFO client.HBaseAdmin: Disabled test 0 row(s) in 6.0426 seconds > drop 'test' 09/04/19 06:40:17 INFO client.HBaseAdmin: Deleted test 0 row(s) in 0.0210 seconds > list 0 row(s) in 2.0645 seconds Connecting to HBase • Java client – get(byte [] row, byte [] column, long timestamp, int versions); • Non-Java clients – Thrift server hosting HBase client instance • Sample ruby, c++, & java (via thrift) clients – REST server hosts HBase client • TableInput/OutputFormat for MapReduce – HBase as MR source or sink • HBase Shell – JRuby IRB with “DSL” to add get, scan, and admin – ./bin/hbase shell YOUR_SCRIPT Thrift $ hbase-daemon.sh start thrift $ hbase-daemon.sh stop thrift • a software framework for scalable cross-language services development. • By facebook • seamlessly between C++, Java, Python, PHP, and Ruby. • This will start the server instance, by default on port 9090 • The other similar project “rest” References • Introduction to Hbase trac.nchc.org.tw/cloud/rawattachment/wiki/.../hbase_intro.ppt ACID Atomic: Either the whole process of a transaction is done or none is. Consistency: Database constraints (applicationspecific) are preserved. Isolation: It appears to the user as if only one process executes at a time. (Two concurrent transactions will not see on another’s transaction while “in flight”.) Durability: The updates made to the database in a committed transaction will be visible to future transactions. (Effects of a process do not get lost if the system crashes.) CAP Theorem Consistency: Every node in the system contains the same data (e.g. replicas are never out of data) Availability: Every request to a non-failing node in the system returns a response Partition Tolerance: System properties (consistency and/or availability) hold even when the system is partitioned (communicate lost) and data is lost (node lost) Cassandra Structured Storage System over a P2P Network Why Cassandra? • Lots of data – Copies of messages, reverse indices of messages, per user data. • Many incoming requests resulting in a lot of random reads and random writes. • No existing production ready solutions in the market meet these requirements. Design Goals • High availability • Eventual consistency – trade-off strong consistency in favor of high availability • Incremental scalability • Optimistic Replication • “Knobs” to tune tradeoffs between consistency, durability and latency • Low total cost of ownership • Minimal administration innovation at scale • google bigtable (2006) – consistency model: strong – data model: sparse map – clones: hbase, hypertable • amazon dynamo (2007) – O(1) dht – consistency model: client tune-able – clones: riak, voldemort cassandra ~= bigtable + dynamo proven • The Facebook stores 150TB of data on 150 nodes web 2.0 • used at Twitter, Rackspace, Mahalo, Reddit, Cloudkick, Cisco, Digg, SimpleGeo, Ooyala, OpenX, others Data Model ColumnFamily1 Name : MailList KEY Name : tid1 Name : tid2 Name : tid3 Name : tid4 Value : <Binary> Value : <Binary> Value : <Binary> Value : <Binary> TimeStamp : t1 TimeStamp : t2 TimeStamp : t3 TimeStamp : t4 ColumnFamily2 Column Families are declared upfront are SuperColumns added and modified Columns are added dynamically and modified dynamically Columns are added and modified Type : Simple Sort : Name dynamically Name : WordList Type : Super Name : aloha Sort : Time Name : dude C1 C2 C3 C4 C2 C6 V1 V2 V3 V4 V2 V6 T1 T2 T3 T4 T2 T6 ColumnFamily3 Name : System Type : Super Sort : Name Name : hint1 Name : hint2 Name : hint3 Name : hint4 <Column List> <Column List> <Column List> <Column List> Write Operations • A client issues a write request to a random node in the Cassandra cluster. • The “Partitioner” determines the nodes responsible for the data. • Locally, write operations are logged and then applied to an in-memory version. • Commit log is stored on a dedicated disk local to the machine. write op Write cont’d Key (CF1 , CF2 , CF3) • Data size Memtable ( CF1) Commit Log • Number of Objects • Lifetime Memtable ( CF2) Binary serialized Key ( CF1 , CF2 , CF3 ) Memtable ( CF2) Data file on disk K128 Offset Dedicated Disk <Key name><Size of key Data><Index of columns/supercolumns>< Serialized column family> --- K256 Offset --- K384 Offset --- Bloom Filter <Key name><Size of key Data><Index of columns/supercolumns>< Serialized column family> (Index in memory) BLOCK Index <Key Name> Offset, <Key Name> Offset --- Compactions K1 < Serialized data > K2 < Serialized data > K3 < Serialized data > -Sorted --- K2 < Serialized data > K4 < Serialized data > K10 < Serialized data > K5 < Serialized data > K30 < Serialized data > K10 < Serialized data > -- -- DELETED Sorted --- MERGE SORT Index File K1 < Serialized data > Loaded in memory K2 < Serialized data > K3 < Serialized data > K1 Offset K5 Offset K30 Offset Bloom Filter Sorted K4 < Serialized data > K5 < Serialized data > K10 < Serialized data > K30 < Serialized data > Data File Sorted --- Write Properties • • • • • No locks in the critical path Sequential disk access Behaves like a write back Cache Append support without read ahead Atomicity guarantee for a key • “Always Writable” – accept writes during failure scenarios Read Client Query Result Cassandra Cluster Closest replica Read repair if digests differ Result Replica A Digest Query Digest Response Replica B Digest Response Replica C Partitioning And Replication h(key1) 1 0 E A N=3 C h(key2) F B D 1/2 93 Cluster Membership and Failure Detection • Gossip protocol is used for cluster membership. • Super lightweight with mathematically provable properties. • State disseminated in O(logN) rounds where N is the number of nodes in the cluster. • Every T seconds each member increments its heartbeat counter and selects one other member to send its list to. • A member merges the list with its own list . Accrual Failure Detector • Valuable for system management, replication, load balancing etc. • Defined as a failure detector that outputs a value, PHI, associated with each process. • Also known as Adaptive Failure detectors - designed to adapt to changing network conditions. • The value output, PHI, represents a suspicion level. • Applications set an appropriate threshold, trigger suspicions and perform appropriate actions. • In Cassandra the average time taken to detect a failure is 10-15 seconds with the PHI threshold set at 5. Information Flow in the Implementation Performance Benchmark • Loading of data - limited by network bandwidth. • Read performance for Inbox Search in production: Search Interactions Term Search Min 7.69 ms 7.78 ms Median 15.69 ms 18.27 ms Average 26.13 ms 44.41 ms MySQL Comparison • MySQL > 50 GB Data Writes Average : ~300 ms Reads Average : ~350 ms • Cassandra > 50 GB Data Writes Average : 0.12 ms Reads Average : 15 ms Lessons Learnt • Add fancy features only when absolutely required. • Many types of failures are possible. • Big systems need proper systems-level monitoring. • Value simple designs Future work • • • • • Atomicity guarantees across multiple keys Analysis support via Map/Reduce Distributed transactions Compression support Granular security via ACL’s Hive and Pig Need for High-Level Languages • Hadoop is great for large-data processing! – But writing Java programs for everything is verbose and slow – Not everyone wants to (or can) write Java code • Solution: develop higher-level data processing languages – Hive: HQL is like SQL – Pig: Pig Latin is a bit like Perl Hive and Pig • Hive: data warehousing application in Hadoop – Query language is HQL, variant of SQL – Tables stored on HDFS as flat files – Developed by Facebook, now open source • Pig: large-scale data processing system – Scripts are written in Pig Latin, a dataflow language – Developed by Yahoo!, now open source – Roughly 1/3 of all Yahoo! internal jobs • Common idea: – Provide higher-level language to facilitate large-data processing – Higher-level language “compiles down” to Hadoop jobs Hive: Background • Started at Facebook • Data was collected by nightly cron jobs into Oracle DB • “ETL” via hand-coded python • Grew from 10s of GBs (2006) to 1 TB/day new data (2007), now 10x that Source: cc-licensed slide by Cloudera Hive Components • • • • Shell: allows interactive queries Driver: session handles, fetch, execute Compiler: parse, plan, optimize Execution engine: DAG of stages (MR, HDFS, metadata) • Metastore: schema, location in HDFS, SerDe Source: cc-licensed slide by Cloudera Data Model • Tables – Typed columns (int, float, string, boolean) – Also, list: map (for JSON-like data) • Partitions – For example, range-partition tables by date • Buckets – Hash partitions within ranges (useful for sampling, join optimization) Source: cc-licensed slide by Cloudera Metastore • Database: namespace containing a set of tables • Holds table definitions (column types, physical layout) • Holds partitioning information • Can be stored in Derby, MySQL, and many other relational databases Source: cc-licensed slide by Cloudera Physical Layout • Warehouse directory in HDFS – E.g., /user/hive/warehouse • Tables stored in subdirectories of warehouse – Partitions form subdirectories of tables • Actual data stored in flat files – Control char-delimited text, or SequenceFiles – With custom SerDe, can use arbitrary format Source: cc-licensed slide by Cloudera Hive: Example Hive looks similar to an SQL database Relational join on two tables: Table of word counts from Shakespeare collection Table of word counts from the bible SELECT s.word, s.freq, k.freq FROM shakespeare s JOIN bible k ON (s.word = k.word) WHERE s.freq >= 1 AND k.freq >= 1 ORDER BY s.freq DESC LIMIT 10; the I and to of a you my in is 25848 23031 19671 18038 16700 14170 12702 11297 10797 8882 Source: Material drawn from Cloudera training VM 62394 8854 38985 13526 34654 8057 2720 4135 12445 6884 Hive: Behind the Scenes SELECT s.word, s.freq, k.freq FROM shakespeare s JOIN bible k ON (s.word = k.word) WHERE s.freq >= 1 AND k.freq >= 1 ORDER BY s.freq DESC LIMIT 10; (Abstract Syntax Tree) (TOK_QUERY (TOK_FROM (TOK_JOIN (TOK_TABREF shakespeare s) (TOK_TABREF bible k) (= (. (TOK_TABLE_OR_COL s) word) (. (TOK_TABLE_OR_COL k) word)))) (TOK_INSERT (TOK_DESTINATION (TOK_DIR TOK_TMP_FILE)) (TOK_SELECT (TOK_SELEXPR (. (TOK_TABLE_OR_COL s) word)) (TOK_SELEXPR (. (TOK_TABLE_OR_COL s) freq)) (TOK_SELEXPR (. (TOK_TABLE_OR_COL k) freq))) (TOK_WHERE (AND (>= (. (TOK_TABLE_OR_COL s) freq) 1) (>= (. (TOK_TABLE_OR_COL k) freq) 1))) (TOK_ORDERBY (TOK_TABSORTCOLNAMEDESC (. (TOK_TABLE_OR_COL s) freq))) (TOK_LIMIT 10))) (one or more of MapReduce jobs) Hive: Behind the Scenes STAGE DEPENDENCIES: Stage-1 is a root stage Stage-2 depends on stages: Stage-1 Stage-0 is a root stage STAGE PLANS: Stage: Stage-1 Map Reduce Alias -> Map Operator Tree: s TableScan alias: s Filter Operator predicate: expr: (freq >= 1) type: boolean Reduce Output Operator key expressions: expr: word type: string sort order: + Map-reduce partition columns: expr: word type: string tag: 0 value expressions: expr: freq type: int expr: word type: string k TableScan alias: k Filter Operator predicate: expr: (freq >= 1) type: boolean Reduce Output Operator key expressions: expr: word type: string sort order: + Map-reduce partition columns: expr: word type: string tag: 1 value expressions: expr: freq type: int Stage: Stage-2 Map Reduce Alias -> Map Operator Tree: hdfs://localhost:8022/tmp/hive-training/364214370/10002 Reduce Output Operator key expressions: expr: _col1 type: int sort order: tag: -1 value expressions: expr: _col0 type: string expr: _col1 type: int expr: _col2 type: int Reduce Operator Tree: Extract Limit File Output Operator compressed: false GlobalTableId: 0 table: input format: org.apache.hadoop.mapred.TextInputFormat output format: org.apache.hadoop.hive.ql.io.HiveIgnoreKeyTextOutputFormat Reduce Operator Tree: Join Operator condition map: Inner Join 0 to 1 condition expressions: 0 {VALUE._col0} {VALUE._col1} 1 {VALUE._col0} outputColumnNames: _col0, _col1, _col2 Filter Operator predicate: Stage: Stage-0 expr: ((_col0 >= 1) and (_col2 >= 1)) Fetch Operator type: boolean limit: 10 Select Operator expressions: expr: _col1 type: string expr: _col0 type: int expr: _col2 type: int outputColumnNames: _col0, _col1, _col2 File Output Operator compressed: false GlobalTableId: 0 table: input format: org.apache.hadoop.mapred.SequenceFileInputFormat output format: org.apache.hadoop.hive.ql.io.HiveSequenceFileOutputFormat Example Data Analysis Task Find users who tend to visit “good” pages. Visits Pages url time url Amy www.cnn.com 8:00 www.cnn.com 0.9 Amy www.crap.com 8:05 www.flickr.com 0.9 Amy www.myblog.com 10:00 www.myblog.com 0.7 Amy www.flickr.com 10:05 www.crap.com 0.2 Fred cnn.com/index.htm 12:00 ... Pig Slides adapted from Olston et al. pagerank ... user Conceptual Dataflow Load Visits(user, url, time) Load Pages(url, pagerank) Canonicalize URLs Join url = url Group by user Compute Average Pagerank Filter avgPR > 0.5 Pig Slides adapted from Olston et al. System-Level Dataflow Visits load Pages ... ... load canonicalize join by url ... group by user ... the answer Pig Slides adapted from Olston et al. compute average pagerank filter MapReduce Code import import import import java.io.IOException; java.util.ArrayList; java.util.Iterator; java.util.List; reporter.setStatus("OK"); import import import import import import import import import import import import import import import i m po r t import import import import import org.apache.hadoop.fs.Path; org.apache.hadoop.io.LongWritable; org.apache.hadoop.io.Text; org.apache.hadoop.io.Writable; org.apache.hadoop.io.WritableComparable; org.apache.hadoop.mapred.FileInputFormat; org.apache.hadoop.mapred.FileOutputFormat; org.apache.hadoop.mapred.JobConf; org.apache.hadoop.mapred.KeyValueTextInputFormat; o r g . ap a c h e . h a d o o p . m a p r e d . M a p p e r ; org.apache.hadoop.mapred.MapReduceBase; org.apache.hadoop.mapred.OutputCollector; org.apache.hadoop.mapred.RecordReader; org.apache.hadoop.mapred.Reducer; org.apache.hadoop.mapred.Reporter; org.apache.hadoop.mapred.SequenceFileInputFormat; org.apache.hadoop.mapred.SequenceFileOutputFormat; org.apache.hadoop.mapred.TextInputFormat; org.apache.hadoop.mapred.jobcontrol.Job; o r g . a p a c h e . h a d o o p . m a p r e d . j o b c o n t r o l . J oo bn Ct r o l ; org.apache.hadoop.mapred.lib.IdentityMapper; public class MRExample { public static class LoadPages extends MapReduceBase implements Mapper<LongWritable, Text, Text, Text> // Do the cross product and collect the values for (String s1 : first) { for (String s2 : second) { String outval = key + "," + s1 + "," + oc.collect(null, new Text(outval)); reporter.setStatus("OK"); } } } } public static class LoadJoined extends MapReduceBase implements Mapper<Text, Text, Text, LongWritable> { } } public static class ReduceUrls extends MapReduceBase implements Reducer<Text, LongWritable, WritableComparable, Writable> { public file // } } public static class LoadAndFilterUsers extends MapReduceBase implements Mapper<LongWritable, Text, Text, Text> { public void map(LongWritable k, Text val, OutputCollector<Text, Text> oc, Reporter reporter) throws IOException { // Pull the key out String line = val.toString(); int firstComma = line.indexOf(','); String value = line.substring f( irstComma + 1); int age = Integer.parseInt(value); if (age < 18 || age > 25) return; String key = line.substring(0, firstComma); Text outKey = new Text(key); / / P r e p e n d a n i n d e x t o t h e v a l u e s oe wk n o w w h i c h // it came from. Text outVal = new Text("2" + value); oc.collect(outKey, outVal); // store it // accordingly. List<String> first = new ArrayList<String>(); List<String> second = new ArrayList<String>(); while (iter.hasNext()) { Text t = iter.next(); S t r i n g v a l u e = t . tSot r i n g ( ) ; if (value.charAt(0) == '1') first.add(value.substring(1)); else second.add(value.substring(1)); Pig Slides adapted from Olston et al. void reduce( T e x t ky e, Iterator<LongWritable> iter, OutputCollector<WritableComparable, Writable> Reporter reporter) throws IOException { Add up all the values we see oc, long sum = 0; w hi l e ( i t e r . h a s N e x t ( ) ) { sum += iter.next().get(); reporter.setStatus("OK"); } oc.collect(key, new LongWritable(sum)); } } public static class LoadClicks extends MapReduceBase im p l e m e n t s M a p p e r < W r i t a b l e C o m p a r a b l e , W r i t a b l e , L o n g W r i t a b l e , Text> { public file void map( WritableComparable key, Writable val, OutputCollector<LongWritable, Text> oc, R e p o r t e r r e p o r t e r )t h r o w s I O E x c e p t i o n { oc.collect((LongWritable)val, (Text)key); } } public static class LimitClicks extends MapReduceBase implements Reducer<LongWritable, Text, LongWritable, { void reduce(Text key, Iterator<Text> iter, OutputCollector<Text, Text> oc, Reporter reporter) throws IOException { For each value, figure out which file it's { void map( Text k, Text val, O u t p u t C o l lc et o r < T e x t , L o n g W r i t a b l e > o c , Reporter reporter) throws IOException { // Find the url String line = val.toString(); int firstComma = line.indexOf(','); i n t s e c o n d C o m m a = l i n e . i n d e x O f ( ' , ' , f i rCsotm m a ) ; String key = line.substring(firstComma, secondComma); // drop the rest of the record, I don't need it anymore, // just pass a 1 for the combiner/reducer to sum instead. Text outKey = new Text(key); oc.collect(outKey, new LongWritable(1L)); void map(LongWritable k, Text val, OutputCollector<Text, Text> oc, Reporter reporter) throws IOException { // Pull the key out String line = val.toString(); int firstComma = line.indexOf(','); S t r i n g k e y = l i n e . s usbt r i n g ( 0 , f i r s t C o m m a ) ; String value = line.substring(firstComma + 1); Text outKey = new Text(key); // Prepend an index to the value so we know which // it came from. Text outVal = new Text(" "1 + v a l u e ) ; oc.collect(outKey, outVal); public s2; public public } } public static class Join extends MapReduceBase implements Reducer<Text, Text, Text, Text> lp.setOutputKeyClass(Text.class); lp.setOutputValueClass(Text.class); lp.setMapperClass(LoadPages.class); FileInputFormat.addInputPath(lp, new P a t h ( " /u s e r / g a t e s / p a g e s " ) ) ; FileOutputFormat.setOutputPath(lp, new Path("/user/gates/tmp/indexed_pages")); lp.setNumReduceTasks(0); Job loadPages = new Job(lp); } Text> int count = 0; public void reduce( LongWritable key, Iterator<Text> iter, OutputCollector<LongWritable, Text> oc, Reporter reporter) throws IOException { from and // Only output the first 100 records w h i l e ( c o u n t< 1 0 0 & & i t e r . h a s N e x t ( ) ) oc.collect(key, iter.next()); count++; } { JobConf lfu = new JobConf(MRExample.class); l f u . se t J o b N a m e ( " L o a d a n d F i l t e r U s e r s " ) ; lfu.setInputFormat(TextInputFormat.class); lfu.setOutputKeyClass(Text.class); lfu.setOutputValueClass(Text.class); lfu.setMapperClass(LoadAndFilterUsers.class); F i l e I n p u t F o r m a t . a dI dn p u t P a t h ( l f u , n e w Path("/user/gates/users")); FileOutputFormat.setOutputPath(lfu, new Path("/user/gates/tmp/filtered_users")); lfu.setNumReduceTasks(0); Job loadUsers = new Job(lfu); J o b C o n f j o i n = n e w J o b C o n fM(R E x a m p l e . c l a s s ) ; join.setJobName("Join Users and Pages"); join.setInputFormat(KeyValueTextInputFormat.class); join.setOutputKeyClass(Text.class); join.setOutputValueClass(Text.class); join.setMapperClass(IdentityMa pp er.class); join.setReducerClass(Join.class); FileInputFormat.addInputPath(join, new Path("/user/gates/tmp/indexed_pages")); FileInputFormat.addInputPath(join, new Path("/user/gates/tmp/filtered_users")); F i l e O u t p u t F o r m a t . st eO u t p u t P a t h ( j o i n , n e w Path("/user/gates/tmp/joined")); join.setNumReduceTasks(50); Job joinJob = new Job(join); joinJob.addDependingJob(loadPages); joinJob.addDependingJob(loadUsers); JobConf group = new JobConf(MR xE ample.class); group.setJobName("Group URLs"); group.setInputFormat(KeyValueTextInputFormat.class); group.setOutputKeyClass(Text.class); group.setOutputValueClass(LongWritable.class); group.setOutputFormat(SequenceF li eOutputFormat.class); group.setMapperClass(LoadJoined.class); group.setCombinerClass(ReduceUrls.class); group.setReducerClass(ReduceUrls.class); FileInputFormat.addInputPath(group, new Path("/user/gates/tmp/joined")); FileOutputFormat.setOutputPath(group, new Path("/user/gates/tmp/grouped")); group.setNumReduceTasks(50); Job groupJob = new Job(group); groupJob.addDependingJob(joinJob); JobConf top100 = new JobConf(MRExample.class); top100.setJobName("Top 100 sites"); top100.setInputFormat(SequenceFileInputFormat.class); top100.setOutputKeyClass(LongWritable.class); top100.setOutputValueClass(Text.class); t o p 1 0 0 . s e t O u t p u t F o r m a t ( S e q u e n c e F i l e O u t p uotrFm a t . c l a s s ) ; top100.setMapperClass(LoadClicks.class); top100.setCombinerClass(LimitClicks.class); top100.setReducerClass(LimitClicks.class); FileInputFormat.addInputPath(top100, new Path("/user/gates/tmp/grouped")); FileOutputFormat.setOutputPath(top100, new Path("/user/gates/top100sitesforusers18to25")); top100.setNumReduceTasks(1); Job limit = new Job(top100); limit.addDependingJob(groupJob); { } } public static void main(String[] args) throws IOException JobConf lp = new JobConf(MRExample.class); l p . s et J o b N a m e ( " L o a d P a g e s " ) ; lp.setInputFormat(TextInputFormat.class); 18 to { } } JobControl jc = new JobControl("Find 25"); jc.addJob(loadPages); jc.addJob(loadUsers); jc.addJob(joinJob); jc.addJob(groupJob); jc.addJob(limit); jc.run(); t o1 p0 0 sites for users Pig Latin Script Visits = load ‘/data/visits’ as (user, url, time); Visits = foreach Visits generate user, Canonicalize(url), time; Pages = load ‘/data/pages’ as (url, pagerank); VP = join Visits by url, Pages by url; UserVisits = group VP by user; UserPageranks = foreach UserVisits generate user, AVG(VP.pagerank) as avgpr; GoodUsers = filter UserPageranks by avgpr > ‘0.5’; store GoodUsers into '/data/good_users'; Pig Slides adapted from Olston et al. Java vs. Pig Latin 1/20 the lines of code 1/16 the development time 300 180 160 140 120 100 80 60 40 20 0 M in u te s 250 200 150 100 50 0 Hadoop Pig Hadoop Performance on par with raw Hadoop! Pig Slides adapted from Olston et al. Pig Pig takes care of… Schema and type checking Translating into efficient physical dataflow Exploiting data reduction opportunities (e.g., early partial aggregation via a combiner) Executing the system-level dataflow (i.e., sequence of one or more MapReduce jobs) (i.e., running the MapReduce jobs) Tracking progress, errors, etc. Hive + HBase? Integration Reasons to use Hive on HBase: A lot of data sitting in HBase due to its usage in a real-time environment, but never used for analysis Give access to data in HBase usually only queried through MapReduce to people that don’t code (business analysts) When needing a more flexible storage solution, so that rows can be updated live by either a Hive job or an application and can be seen immediately to the other Reasons not to do it: Run SQL queries on HBase to answer live user requests (it’s still a MR job) Hoping to see interoperability with other SQL analytics systems Integration How it works: Hive can use tables that already exist in HBase or manage its own ones, but they still all reside in the same HBase instance Hive table definitions Points to an existing table Manages this table from Hive HBase Integration How it works: When using an already existing table, defined as EXTERNAL, you can create multiple Hive tables that point to it Hive table definitions Points to some column Points to other columns, different names HBase Integration How it works: Columns are mapped however you want, changing names and giving types Hive table definition HBase table persons people name STRING d:fullname age INT d:age siblings MAP<string, string> d:address f: Integration Drawbacks (that can be fixed with brain juice): Binary keys and values (like integers represented on 4 bytes) aren’t supported since Hive prefers string representations, HIVE1634 Compound row keys aren’t supported, there’s no way of using multiple parts of a key as different “fields” This means that concatenated binary row keys are completely unusable, which is what people often use for HBase Filters are done at Hive level instead of being pushed to the region servers Partitions aren’t supported Data Flows Data is being generated all over the place: Apache logs Application logs MySQL clusters HBase clusters Data Flows Moving application log files Transforms format Dumped into HDFS Read nightly Wild log file Tail’ed continuou sly Inserted into Parses into HBase format HBase Data Flows Moving MySQL data Dumped nightly with CSV import HDFS MySQL Tungsten replicator Inserted into Parses into HBase format HBase Data Flows Moving HBase data HBase Prod CopyTable MR job Read in parallel HBase MR Imported in parallel into * HBase replication currently only works for a single slave cluster, in our case HBase replicates to a backup cluster. Use Cases Front-end engineers Research engineers They need some statistics regarding their latest product Ad-hoc queries on user data to validate some assumptions Generating statistics about recommendation quality Business analysts Statistics on growth and activity Effectiveness of advertiser campaigns Users’ behavior VS past activities to determine, for example, why certain groups react better to email communications Ad-hoc queries on stumbling behaviors of slices of the user base Use Cases Using a simple table in HBase: CREATE EXTERNAL TABLE blocked_users( userid INT, blockee INT, blocker INT, created BIGINT) STORED BY 'org.apache.hadoop.hive.hbase.HBaseStorageHandler’ WITH SERDEPROPERTIES ("hbase.columns.mapping" = ":key,f:blockee,f:blocker,f:created") TBLPROPERTIES("hbase.table.name" = "m2h_repl-userdb.stumble.blocked_users"); HBase is a special case here, it has a unique row key map with :key Not all the columns in the table need to be mapped Use Cases Using a complicated table in HBase: CREATE EXTERNAL TABLE ratings_hbase( userid INT, created BIGINT, urlid INT, rating INT, topic INT, modified BIGINT) STORED BY 'org.apache.hadoop.hive.hbase.HBaseStorageHandler’ WITH SERDEPROPERTIES ("hbase.columns.mapping" = ":key#b@0,:key#b@1,:key#b@2,default:rating#b,default:topic#b,default:modified#b") TBLPROPERTIES("hbase.table.name" = "ratings_by_userid"); #b means binary, @ means position in composite key (SU-specific hack) Graph Databases 136 NEO4J (Graphbase) • A graph is a collection nodes (things) and edges (relationships) that connect pairs of nodes. • Attach properties (key-value pairs) on nodes and relationships •Relationships connect two nodes and both nodes and relationships can hold an arbitrary amount of key-value pairs. • A graph database can be thought of as a key-value store, with full support for relationships. • http://neo4j.org/ 137 NEO4J 138 NEO4J 139 NEO4J 140 NEO4J 141 NEO4J 142 NEO4J Properties 143 NEO4J Features • Dual license: open source and commercial •Well suited for many web use cases such as tagging, metadata annotations, social networks, wikis and other network-shaped or hierarchical data sets • Intuitive graph-oriented model for data representation. Instead of static and rigid tables, rows and columns, you work with a flexible graph network consisting of nodes, relationships and properties. • Neo4j offers performance improvements on the order of 1000x or more compared to relational DBs. • A disk-based, native storage manager completely optimized for storing graph structures for maximum performance and scalability • Massive scalability. Neo4j can handle graphs of several billion nodes/relationships/properties on a single machine and can be sharded to scale out across multiple machines •Fully transactional like a real database •Neo4j traverses depths of 1000 levels and beyond at millisecond speed. (many orders of magnitude faster than relational systems) 144