Diatom Research ISSN: 0269-249X (Print) 2159-8347 (Online) Journal homepage: www.tandfonline.com/journals/tdia20 Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages Irena Kaczmarska, Aloisie Poulíčková, Shinya Sato, Mark B. Edlund, Masahiko Idei, Tsuyoshi Watanabe & David G. Mann To cite this article: Irena Kaczmarska, Aloisie Poulíčková, Shinya Sato, Mark B. Edlund, Masahiko Idei, Tsuyoshi Watanabe & David G. Mann (2013) Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages, Diatom Research, 28:3, 263-294, DOI: 10.1080/0269249X.2013.791344 To link to this article: https://doi.org/10.1080/0269249X.2013.791344 Published online: 13 May 2013. Submit your article to this journal Article views: 1972 View related articles Citing articles: 20 View citing articles Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=tdia20 Diatom Research, 2013 Vol. 28, No. 3, 263–294, http://dx.doi.org/10.1080/0269249X.2013.791344 Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages IRENA KACZMARSKA1∗ , ALOISIE POULÍČKOVÁ2 , SHINYA SATO3,4,5 , MARK B. EDLUND6 , MASAHIKO IDEI7 , TSUYOSHI WATANABE8 & DAVID G. MANN3 1 Department of Biology, Mount Allison University, Sackville, Canada 2 Department of Botany, Palacký University, Olomouc, Czech Republic 3 Royal Botanic Garden Edinburgh, Edinburgh, UK 4 Cardiff School of Biosciences, Cardiff University, Cardiff, UK 5 Graduate School of Science and Engineering, Yamaguchi University, Yamaguchi, Japan 6 St. Croix Watershed Research Station, Science Museum of Minnesota, St. Croix, MN, USA 7 Department of Biology, Bunkyo University, Koshigaya, Japan 8 Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama-shi, Japan The past few decades have brought about a significant expansion in our understanding of the diatom life cycle, particularly its sexual part. Presented here is a set of proposals for the terminology of processes and structures associated with sexual reproduction and for the resting stages of diatoms, some of which have at times been confused with each other. The proposals fill the void present in widely used publications offering standardized terminology related to diatom frustule micro-architecture. Keywords: auxosporulation, diatoms, gametogenesis, life cycle, resting stages, sexual reproduction, terminology 1. Rationale Several decades have passed since developments in electron microscopy began to reveal an unanticipated level of micro-architectural complexity in the diatom frustule. Features such as rimoportulae and fultoportulae, which had been detectable only as dots or spines under the light microscope, were revealed to have an intricate and characteristic substructure, and much new detail was revealed in the striae, areolae and raphe slits. Consequently, existing terms often needed to be refined and many new ones invented. Faced with the rapidly expanding vocabulary of diatom terms, a small group got together in the 1970s to prepare a new, standardized terminology focused on the diatom valve. The result was the set of proposals by Anonymous (1975), von Stosch (1975) and Ross et al. (1979). These papers have served diatomists well but they contain little guidance about the processes and structures present during the sexual phase of the diatom life cycle, which until ca. 1980 were studied largely using light microscopy. In the second half of the 20th century, the most relevant papers on the diatom life cycle were issued by just two researchers, L. Geitler (Vienna) and H.A. von Stosch (Marburg), together with their close colleagues, and almost all papers were published in German. In the last two decades, however, there has been a great increase in the number and geographical origin of studies focused on the sexual ∗ Corresponding author. E-mail: iehrman@mta.ca (Received 28 May 2012; accepted 18 March 2013) © 2013 The International Society for Diatom Research Published online 13 May 2013 phase, and in the level of detail at which reproductive structures could be observed. In these and other studies, electron microscopy in particular, contributed to the understanding of the diversity of structures (e.g., scales, plates) and possibly, the evolutionary relationships among the diatoms harbouring them. For example, based on auxospore development alone, von Stosch (1982) suggested close relationships between some polar centrics and pennates, which was later expanded and corroborated by molecular evidence (Medlin & Kaczmarska 2004). Nonetheless, for many researchers, the sexual phase of the diatom life cycle is probably still a little mysterious and its terminology obscure. At the 21st International Diatom Symposium held in 2010 in St. Paul, Minnesota, informal meetings were held to discuss the possibility of preparing a terminology for the structures and processes present during diatom sexual reproduction. A working group was subsequently organized (by IK) that has conducted its business largely by e-mail and produced the present set of proposals, which expands on the limited terminology provided by Ross et al. (1979). 2. Introduction For many diatoms, sexuality is an obligatory life stage because it is an integral part of the process by which cells reverse the diminution of size, or size reduction, that occurs 264 Kaczmarska et al. C B A Fig. 1. A summary of the principal features of the life cycle of diatoms in three main variants, namely non-polar (A) and polar (B) centric diatoms, and pennate diatoms (C). In gametangia, larger circles represent functional nuclei (light = diploid, dark = haploid) whereas smaller circles represent pyknotic nuclei. F/− & M/+ symbolize female/male or non-motile/motile gametes respectively. (AP & IK original; drawings are based on: for the non-polar centric Coscinodiscus granii after Schmid 1995 with the permission of Biopress Ltd.; for the polar centric Lithodesmium undulatum redrawn after von Stosch 1982 with the permission of J. Cramer Publishing and after Manton & von Stosch 1966 with the permission of Blackwell Science Ltd, UK; for a pennate Neidium sp. AP, original). during the vegetative phase (Fig. 1). Size reduction comes about because of the peculiar and unique method of diatom cell division, in which new wall elements (valves and girdle bands) are produced within existing wall elements inherited from the parent cell and are therefore smaller than the parent wall elements. Diminution is reversed by size restitution, which occurs by one of two methods: vegetative cell enlargement or auxosporulation, which are defined below. Of the two, the more common is apparently auxosporulation and this usually, but not always, involves sexual reproduction. Therefore, in one short-lived lifehistory stage, auxosporulation usually brings about both genetic recombination and the reintroduction of large cells to local populations of a species. The general outline of the diatom life cycle has been detailed by Round et al. (1990), Edlund & Stoermer (1997) and Chepurnov et al. (2004) to name a few. The principal features of the sexual life cycle are summarized for the three major variants in Fig. 1. Our proposals begin with general terminology for the life cycle events and the phenomenon of sexual reproduction and then proceed to details of the cells and structures involved in fertilization and auxospore development (sections 3–9). Then our discussion ends with resting stages (which are only rarely associated with auxosporulation) and some special features of vegetative reproduction that are often encountered during studies of the life cycle (section Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages 10), such as the formation of internal valves and abrupt size reduction, through which the size diminution is accelerated, bringing cells to the sex-inducible stage faster. Terms appearing in bold type are formally defined at that point in the proposals. These terms are the ones that are recommended to be used, while some other terms and synonyms present in the literature are given in parentheses or discussed in the text. Indented entries deal with variants of the entities defined in the main paragraph, or with phenomena or structures associated with these entities. In the diagrams accompanying the terminology, diploid nuclei are designated by open circles, haploid nuclei by filled circles. Functional nuclei, either diploid or haploid, are always shown larger than non-functional nuclei (‘pyknotic’ nuclei: section 4.5.11). Sections 6, 9 and 10 are divided into thematic subsections with italicized headings, to aid orientation. In the examples provided here, whenever possible, the names of diatom taxa are used as they currently appear in AlgaeBase (Guiry & Guiry 2012; www.algaebase.org; September 2011) because taxonomic reappraisal is not the focus of our presentation. In cases in which the taxonomic affiliation of a diatom has changed since the publication of information relevant to this terminology, the name used by the original author is shown as a synonym (in parentheses). Most figures are adapted from earlier publications, but some are original works by the authors. This is indicated in the figure legend by the word ‘original’ following the author’s initials. 3. Life cycle 3.1. The life cycle of a diatom is the series of developmental changes through which a diatom passes from its initial state to the same state in the next generation. Usually, the life cycle comprises: (1) a period of vegetative, mitotic cell division; and (2) a period of sexual reproduction preceding ‘auxosporulation’ (see section 3.3). The analogous series of developmental changes in single cells, from one mitotic cell division to the next, comprises the cell cycle of a diatom. Three variants of the diatom life cycle are shown in Fig. 1A–C. Diatoms are diplonts, i.e., organisms that are diploid in all stages of the life cycle except for the gametes, which are haploid; individual gametes do not usually develop further (but see ‘haploid parthenogenesis’ in section 5.4) and must combine with another, sexually compatible gamete in order to give rise to a new diploid individual. 3.2. An auxospore is a specialized cell that has the capacity of expanding in a highly controlled fashion, involving the formation of unique wall elements (incunabula, perizonia: see sections 9.1 and 9.2) not found at any other stage of the life cycle, to regenerate the characteristic size and shape of a diatom. It is usually formed sexually, but occasionally apomictically or even vegetatively. Corresponding to these two modes of formation, the auxospore is derived 265 from a zygote (sexual auxospore), or from a pseudozygote (see section 5.3) or unreduced vegetative cell (asexual auxospores), respectively. Asexual auxospores are not synonymous with vegetatively enlarging cells (see section 3.5). Although the transformation of the zygote, pseudozygote or unreduced cell into an auxospore is probably a continuous process, it is considered to be complete when the auxospore begins to expand. The auxospore becomes ‘mature’ when it has completed expansion and contains the initial cell (see section 3.4). Auxospores are usually diploid, but haploid or polyploid auxospores are also known to be formed, e.g., in Licmophora C. Agardh (Roshchin & Chepurnov 1994), Craticula Grunow (Mann & Stickle 1991) and Pinnularia Ehrenberg (Poulíčková et al. 2007, Poulíčková & Mann 2008). The fate of the auxospores with unusual numbers of nuclei is poorly understood. Auxospores are not themselves dormant resting stages and rarely develop into such stages (see section 10.1). They are not dispersal units. 3.3. Auxosporulation refers to the whole process by which an auxospore is formed, develops and, following expansion, gives rise to new, enlarged initial cell(s). In most diatoms that have been investigated, auxosporulation will not occur if cell sizes exceed a critical size threshold (see section 3.6), which differs from species to species. This is a permissive threshold and auxosporulation may not occur unless other requirements are also met, such as particular physical or chemical conditions, cell densities or the presence of compatible mates. Just as auxosporulation is impossible for cells above a certain critical size threshold, so it may also be impossible below a second threshold (the lower sexual size threshold: see section 3.6). In this case, the smallest cells continue to divide and get smaller still but are unable to auxosporulate, although they may be capable of vegetative cell enlargement, as in Achnanthes Bory de Saint-Vincent (Chepurnov & Mann 1997). Diatoms for which there is a lower threshold for auxosporulation are said to have a closed life cycle, those in which there is no lower threshold have an open life cycle. 3.3.1. Uniparental auxosporulation is the formation of an auxospore from a single parental cell, following automixis (see section 5.2) or apomixis (see section 5.3), or as a consequence of vegetative differentiation. Examples are Achnanthes brevipes var. intermedia (Kützing) Cleve (Roshchin & Chepurnov 1993), Fragilaria capucina var. vaucheriae (Kützing) LangeBertalot (= Synedra vaucheriae: Geitler 1958), Reimeria sinuata (Gregory) Kociolek & Stoermer (= Cymbella sinuata: Geitler 1958), Sellaphora pupula (Kützing) Mereschkowsky (Mann et al. 2004), Muelleria peraustralis (W. West & G. S. West) Spaulding & Stoermer and Scoliopleura peisonis Grunow (Edlund & Spaulding 2006). This is a broadly defined term that is particularly useful when there is insufficient cytological information to determine whether the formation of the auxospore includes meiosis. 266 Kaczmarska et al. Fig. 2. Vegetative cell enlargement in Coscinodiscus wailesii represents an asexual means of restoring large size-class cells into the population. The sequence of figures from left to right shows: a small vegetative cell; expansion of the protoplast; release of the protoplast from the frustule; formation of the epivalve in the enlarged cell following acytokinetic mitosis and pyknosis of one of the sibling nuclei; and completion of the vegetative cell enlargement with the production of a large cell/frustule after another acytokinetic mitosis and nuclear pyknosis (MBE original; drawings are based after Nagai et al. 1995 with the permission of Allen Press Publishing Services). 3.3.2. Biparental auxosporulation is the formation of one or two auxospores through the union of gametes derived from two different parental cells. Biparental auxospores result from allomixis (see section 5.1). The occurrence of uni- or biparental auxosporulation is usually species-specific, but within a genus (e.g., Pinnularia and Neidium Pfitzer: Mann & Chepurnov 2005, Poulíčková et al. 2007, Poulíčková & Mann 2008, Poulíčková 2008a) and sometimes even within a single species (e.g., Cyclotella meneghiniana Kützing, Denticula tenuis Kützing: Iyengar & Subrahmanyan 1944, Geitler 1953, Mills & Kaczmarska 2006), both uni- and biparental auxosporulation may sometimes occur. 3.3.3. Two- (or multi-) step auxosporulation is a process in which post-initial cells can undergo a further step of successful auxosporulation without a significant intervening reduction in size. It has been documented, for example, in Coscinodiscus granii Gough (Roshchin 1994) and Thalassiosira punctigera (Castracane) Hasle (Chepurnov et al. 2006). It is unclear whether the second (or third) steps always occur through the same process as the first. 3.4. The initial cell is the first vegetative cell formed within the mature auxospore, complete with a fully formed frustule (the initial frustule composed of the initial epitheca and the initial hypotheca, each with an initial valve). Normally, each initial theca is produced following acytokinetic mitosis (see section 10.3), which results in an initial cell containing one diploid and up to two pyknotic nuclei (see section 4.5.11). The initial epitheca and initial hypotheca often differ morphologically from the thecae of normal vegetative post-auxospore cells, because of their formation within the auxospore rather than within another vegetative cell. It is often convenient to refer to the first few mitotic generations of cells produced by division of the initial cell as post-initial cells. 3.5. Vegetative cell enlargement is the size restitution through the partial or complete release of a vegetative cell protoplast from its frustule, its subsequent expansion, and the formation of a new frustule, as in Coscinodiscus wailesii Gran & Angst (Nagai et al. 1995; Fig. 2), Achnanthes longipes C. Agardh, and other centric and pennate species (von Stosch 1965, Roshchin & Chepurnov 1992). The cell initiating vegetative enlargement is not differentiated from other vegetative cells (except that the cells are usually in the later stages of size reduction and hence small) and does not undergo meiosis in preparation for, or during, enlargement. The characteristic incunabula or perizonia of auxospores are absent and the enlarged cells produced by vegetative enlargement may not expand to the same maximum size as the auxospores of the same species; they may have modified frustule morphology relative to the parental cells. 3.6. Although there is now evidence that diatom life cycles are more flexible and varied (Schmid 1995) than was thought or implied previously (e.g., in the accounts of the life cycle by Drebes 1977a or Round et al. 1990), it seems nevertheless to be true, especially in pennate diatoms, that each species or even population exhibits fairly constant ranges of size for different kinds of cells. This leads to the concept of cardinal points in the diatom life history Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages (reviewed by Davidovich 2001, Edlund & Bixby 2001, Chepurnov et al. 2004), which comprise: (1) the size of the initial cells; (2) the size of the cells first capable of sexual size restitution [i.e., the position of the critical (upper) sexual size threshold]; and (3) the size at which cells die, because they have reached the minimum viable size. (4) A fourth cardinal point exists in diatoms with a closed life cycle, namely the size at which cells lose the capacity for auxosporulation (the lower sexual size threshold). 4. Sexual reproduction: cell types and development 4.1. Sexual reproduction in diatoms refers to the whole process of sexualization, the production of gametes (or gametic nuclei) through the differentiation and development of gametangia, meiosis and subsequent fertilization to produce zygotes (full sexuality, Fig. 1). In cases where fertilization involves the fusion of nuclei derived from the same gametangium, the diatom may be said to exhibit reduced sexuality, as, for example, in autogamy. 4.2. A gamete is a haploid cell (or occasionally an unreduced diploid cell, if meiosis fails) that fuses with another such cell during sexual reproduction, leading to fertilization. Diatoms produce several types of gametes. 4.2.1. Fusing gametes may be physiologically and morphologically identical (isogametes), in which case fertilization (and therefore also sexual reproduction itself) is isogamous, as in Eunotia tropica Hustedt (Idei in Hori 1993) or Achnanthidium (= Achnanthes) minutissimum (Kützing) Czarnecki (Mizuno in Hori 1993). Or, the gametes may be morphologically or physiologically different (anisogametes), in which case fertilization is morphologically or physiologically anisogamous, as in Licmophora communis (Heiberg) Grunow or Tabularia (Kützing) D.M. Williams & Round (Chepurnov & Mann 2004, Davidovich et al. 2011). The most extreme, differentiated form of anisogamous reproduction is oogamy, in which a large egg cell is fertilized by a small uniflagellate sperm. Almost as extreme anisogamy occurs also in a few pennate species. For example, in Rhabdonema Kützing, one or two large, non-motile ‘eggs’ and small non-flagellated but motile spermatia are produced (see section 4.2.6). In those diatoms in which sexually compatible gametes resemble each other morphologically but differ in their behaviour (e.g., one being motile while the other is not), reproduction is said to be physiologically anisogamous (Neidium, Sellaphora Mereschkovsky: Mann 1984, 1989b); it is recommended that such cases are always referred to as ‘physiological anisogamy’ rather than simply ‘anisogamy’, to avoid the implication that gametes differ in size or visible structure or are differentiated into sperm and eggs. 4.2.2. In anisogamous diatoms, it is conventional to refer to sometimes smaller, motile gametes as ‘male’gametes and non-motile gametes as ‘female’gametes. In oogamous diatoms, these terms are unlikely to cause any confusion 267 (the uniflagellate sperm, and the cells that produce them, are ‘male’, and oogonia producing egg cells are ‘female’; e.g., in Melosira varians C. Agardh: von Stosch 1951). By extension, the amoeboid small spermatia in Rhabdonema adriaticum Kützing (von Stosch 1958), the swirling and rotating gametes in Tabularia fasciculata (C. Agardh) D.M. Williams & Round (Davidovich et al. 2010) and Pseudostaurosira D.M. Williams & Round (Sato et al. 2011), and the motile gametes of Nitzschia longissima (Brébisson) Ralfs (Davidovich et al. 2006) and Sellaphora species (Mann 1989b) can also be termed ‘male’. For the same diatoms, the ‘egg cells’ of the araphid pennates Rhabdonema, the non-motile gametes of Tabularia and Pseudostaurosira, and the non-motile gametes of Nitzschia longissima or Sellaphora can be termed ‘female’. Further, if a gametangium (see section 4.4) produces only motile gametes or only non-motile gametes, it is convenient to refer to them as ‘male’ or ‘female’ gametangia, respectively. Note that it is not implied that the ‘male’ gametes of non-oogamous diatoms are homologous with sperm, or that the ‘female’ gametes are homologous with egg cells. It should be noted also that, using gamete size alone as an indication of its sex or of the occurrence of anisogamy is unreliable in pennate diatoms, since the size of gametes depends on the size of the gametangium producing them (Davidovich 2001) and thus will vary over the life cycle of a clone as the vegetative cells capable of becoming gametangia diminish in size. Consequently, motile ‘male’ gametes may sometimes be larger than the passive gametes they fertilize, e.g., in Pseudostaurosira (Sato et al. 2011). 4.2.3. In some cases (e.g., Pinnularia nodosa (Ehrenberg) W. Smith: Poulíčková & Mann 2008), cells are encountered that are similar to gametes in their ploidy and how they are formed, but that appear incapable of fusing with each other. These ‘pseudogametes’ may have no function and may be teratological. 4.2.4. An egg is the large, immobile macrogamete of oogamous diatoms, which may be enclosed, where only a small part of the egg cell is exposed to allow fertilization (e.g., Leptocylindrus danicus Cleve, Melosira moniliformis (O.F. Müller) C. Agardh: French & Hargraves 1985, Idei & Chihara 1992), or exposed, where the oogonium dehisces to expose a large area for fertilization (e.g., Attheya decora West: Drebes 1977b), or free, where the egg cell is liberated into the medium apparently rendering the entire cell surface available for fertilization (e.g., Lithodesmium undulatum Ehrenberg, Ditylum brightwellii (West) Grunow: Manton & von Stosch 1966, Koester et al. 2007; Fig. 3). 4.2.5. Sperm are the anteriorly uniflagellate microgamete of oogamous diatoms (Fig. 4), e.g., Melosira varians (von Stosch 1951). Terms for sperm ultrastructure (e.g., transitional fibres, mastigonemes) are not included here: many are illustrated and recently reported for sperm 268 Kaczmarska et al. Fig. 3. Oogonium with one egg nearly free and the other still within the oogonial frustule in Lithodesmium undulatum, redrawn after Manton & von Stosch (1966) with the permission of Blackwell Science Ltd, UK. Fig. 4. Opened mature spermatogonangium with uniflagellate sperm and frustule-less secondary spermatocytes in Lithodesmium undulatum, redrawn after Manton & von Stosch 1966 with the permission of Blackwell Science Ltd, UK. ultrastructure in Thalassiosira Cleve and Melosira C. Agardh (Idei et al. 2013). 4.2.6. A spermatium is a non-flagellate microgamete, which may possess some capacity for movement, including amoeboid movement, as in Rhabdonema (von Stosch 1958), or more vigorous types of motion seen in some other araphid species. For example, in two species of Tabularia (T. tabulata (C. Agardh) Snoeijs and T. fasciculata), gamete movements coincide with growth and retraction of cell surface projections that are behaviourally and morphologically consistent with pseudopodia (Davidovich et al. 2010, 2011). In Pseudostaurosira trainorii E.A. Morales, motility comprises amoeboid and/or spinning movements associated with the extrusion and retrieval of microtubule-based threads (Sato et al. 2011). 4.3. A gametogonangium is a cell from which or in which the gametangia are formed. 4.3.1. A spermatogonangium is a diploid cell that undergoes successive depauperating mitotic cell divisions (Fig. 4; see section 4.3.2). These divisions may be accompanied by the formation of reduced, more or less silicified Fig. 5. Spermatogenesis (sensu lato) in Odontella. Maturing spermatogonangium with four spermatogonia at varying stages of development (two are in the primary spermatocyte stage and two in the secondary spermatocyte stage); in Odontella granulata spermatogonia carry vestigial valves, redrawn after von Stosch (1958) with the permission of John Wiley & Sons Ltd. or vestigial thecae (Melosira sp., Odontella [= Biddulphia] granulata (Roper) Ross: Drebes 1977a; Fig. 5) or produce entirely valve-less spermatogonia (Coscinodiscus granii, Schmid 1995; Fig. 4) following respective cytokineses. It may also involve acytokinetic mitoses, all within the confines of the spermatogonangial frustule. Divisions within a spermatogonangium lead to the production of spermatogonia (see section 4.4), which in diatoms usually undergo meiosis to produce sperm and therefore are primary spermatocytes. 4.3.2. Depauperating cell divisions (these have sometimes, incorrectly, been called ‘depauperizing’ divisions, e.g., Drebes 1977a) are successive differentiating steps of mitosis and cytokinesis of the spermatogonangia that are not accompanied by growth of the daughter cells, so that the resulting cells become smaller and smaller until primary spermatocytes are produced. Depauperating divisions occur during the spermatogenesis in centrics (e.g., Chaetoceros didymus Ehrenberg, Coscinodiscus granii: von Stosch et al. 1973, Schmid 1995), and also during the formation of the spermatia in the araphid pennate Rhabdonema (von Stosch 1958; Fig. 6). 4.4. A gametangium is a cell that undergoes meiosis to produce gametes. In oogamous diatoms, this term will Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages Fig. 6. Formation of spermatia and egg in Rhabdonema adriaticum (redrawn from von Stosch 1958 with the permission of John Wiley & Sons Ltd). The residual body left after the spermatial maturation is omitted here (see schematic representation of the process in Fig. 12, Level 3D). usually be replaced by oogonium, for a cell in which one (e.g., Chaetoceros diadema (Ehrenberg) Gran: French & Hargraves 1985) or two egg cells (e.g., Odontella mobiliensis (Bailey) Grunow: von Stosch 1954) are produced following meiosis, and spermatogonium for a cell that subsequently produces the sperm (or spermatia in the araphid pennate Rhabdonema). In the many pennate diatoms that are isogamous, there is no obvious or consistent differentiation into different types of gametangia (see section 4.5.7). 4.5. Gametogenesis is the process by which gametes are formed within a gametangium. Since diatoms are diplonts (see section 3.1), gametogenesis always includes meiosis but the process and the products differ between centric and pennate species. Two types of gametogenesis occur in centric diatoms: spermatogenesis, in which sperm are formed via meiosis from a primary spermatocyte (see sections 4.5.2–4.5.4) and oogenesis, in which one or two eggs are produced via meiosis from a primary oocyte (see section 4.5.6). 4.5.1. By analogy with the development of chytrid fungi (Webster & Weber 2007, p. 128), the production of gametes by a gametangium (centric or pennate) can be said to be holocarpic if the whole of the gametangial protoplast is converted into gametes, and eucarpic if part of the gametangial protoplast is excluded as a residual cell or residual body (see sections 4.5.9 and 4.5.10). 4.5.2. Spermatogenesis is strictly the process in oogamous diatoms by which a diploid primary spermatocyte undergoes meiosis to produce sperm, but the term can also be applied more loosely to the whole process by which spermatogonangia give rise to sperm (e.g., Actinocyclus sp., Coscinodiscus granii: Idei in Hori 1993, Schmid 1995; Fig. 7A–D). 4.5.3. In hologenous spermatogenesis, the whole of the primary spermatocyte is partitioned among the four sperm, e.g., Attheya decora (Drebes 1977b; Fig. 7A), i.e., it 269 is holocarpic. Generally, the primary spermatocyte divides to form two haploid secondary spermatocytes (Figs 5, 7A–B) at the end of meiosis I (sometimes referred to as proto-gametes, as in Lithodesmium undulatum, Manton & von Stosch 1966), and these secondary spermatocytes then divide to produce two haploid spermatids, which differentiate into sperm, e.g., Attheya decora (Drebes 1977b). 4.5.4. In merogenous spermatogenesis, the spermatids bud off from the spermatocyte(s) after meiosis II, leaving one or two residual bodies (see section 4.5.10) (Fig. 7B–C), so that the development is eucarpic. In merogenous species, the sperm often lack chloroplasts because these are segregated into the residual bodies. Examples are Actinocyclus sp. (Idei in Hori 1993, Idei et al. 2012; Fig. 7C) and Pleurosira laevis (Ehrenberg) Compère (= Biddulphia laevis: Heath & Darley 1972; Fig. 7B). 4.5.5. A plasmodium is a mass of protoplasm containing several nuclei resulting from acytokinetic nuclear divisions in the spermatogonangium, e.g., during spermatogenesis in Guinardia flaccida (Castracane) H. Peragallo (Fig. 7D) or Pleurosira laevis (Heath & Darley 1972). The plasmodium acts as the spermatocyte, cleaving off sperm. It is suggested that in diatoms this term should only be applied to cells with four or more functional nuclei. 4.5.6. Oogenesis is the process by which an egg cell is formed within an oogonium by oogamous diatoms (Figs 8A–C, 9–11, 12C). Within each oogonium is one oocyte, a cell whose nucleus will enter meiosis. The number of eggs produced within an oogonium is either one (e.g., Melosira moniliformis, Rhabdonema adriaticum, Odontella rhombus (Ehrenberg) Kützing: von Stosch 1956, 1958, Migita 1967; Fig. 8C) or two (Attheya decora: Drebes 1977b). Oogenesis varies in whether or not a cytokinesis takes place in the oogonium, the equality of the cytokinesis if present, and the fate of the haploid nuclei. Variants include: (1) an equal cytokinesis following meiosis I with degeneration of one nucleus in each cell after meiosis II (Fig. 8A) to produce two eggs, e.g., in O. mobiliensis or O. granulata (von Stosch 1954, 1958; Fig. 9); (2) an unequal cytokinesis following meiosis I, producing a residual cell (see section 4.5.9), which does not develop further, and a cell that undergoes meiosis II with degeneration of one nucleus, e.g., in O. rhombus or Cerataulus smithii Ralfs ex Pritchard (von Stosch 1956; Fig. 10) or Rhabdonema adriaticum (von Stosch 1958; Fig. 6); and (3) no cytokinesis with degeneration of a nucleus after each of meiosis I and II, e.g., in Melosira varians (von Stosch 1954) or Bacteriastrum hyalinum Lauder (Drebes 1972) (see Figs 8C, 11, respectively). Types 1 and 3 are holocarpic, type 2 is eucarpic. 4.5.7. Pennate gametogenesis: in most pennate species examined, the gametogenesis occurs after pairing of sexualized vegetative cells; after meiosis, one or two iso- or anisogametes (see section 4.2.1) are produced per gametangium (Fig. 12A–D) 270 Kaczmarska et al. Fig. 7. Schematic representation of the types of spermatogenesis reported in centric diatoms. Level 1, depauperating (A–C) and acytokinetic (D) mitoses; level 2, meiosis I and the secondary spermatocytes; level 3, meiosis II and mature sperm cells, residual bodies and gametic nuclei in plasmodium. Four variants (A–D) of the process are indicated vertically, including sperm from equal meiosis I and II in column A; the sperm separate from two-nucleated cells; B–C sperm separate from two- or four-nucleated cells following meiosis II and the detachment from residual bodies (irregularly shaped cells); D represents an acytokinetic development of the spermatogonangium in Guinardia flaccida as described in Hoppenrath et al. (2009), resulting in the formation of a plasmodial primary spermatocyte (for simplicity the plasmodium is shown as containing only two diploid nuclei). Two- and four-nucleated cells are not illustrated. IK, original. 4.5.8. Gamete rearrangement: in pennate species, cytokinesis (after meiosis I) proceeds in the median valvar plane of the gametangium, as during mitotic cell division. However, the daughter protoplasts sometimes slide over each other (rearrange) to move from their initial parallel positions beneath each valve to lie one towards each pole of the gametangium, as in Caloneis silicula (Ehrenberg) Cleve (Mann 1989a) and Pinnularia cf. gibba Ehrenberg (Poulíčková et al. 2007). 4.5.9. Residual cells (= polar body; = supernumerary cell pro parte) are sometimes cut off during gametogenesis and other divisions. They are small cells, containing one or more nuclei (haploid or diploid) and a small amount of cytoplasm, e.g., in Cerataulus smithii or O. rhombus (von Stosch 1956; Figs 6, 9) or Eunotia bilunaris (Ehrenberg) Schaarschmidt (Mann et al. 2003; Figs 12D, 23). Whether residual cells perform any function in gametogenesis other than being receptacles for superfluous protoplast and nuclei is currently unclear. It has been suggested that they may in some cases facilitate plasmogamy through their expansion (e.g., in Sellaphora: Mann 1989b). Residual cells are also formed, with diploid nuclei, during the vegetative phase of the life cycle (see section 10). 4.5.10. A residual body is a cell produced by a gametangium that does not function as a gamete and contains no nucleus, unlike residual cells, but sometimes contains chloroplasts (e.g., in merogenous spermatogenesis of centric diatoms and some pennate species such as Rhabdonema: von Stosch 1958). 4.5.11. Pyknosis: during gametogenesis, diatom nuclei are often destroyed as part of normal development. Degenerating nuclei were first observed when stained with dyes Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages 271 Fig. 8. Variations of oogenesis in centric diatoms. Gametangium (normally containing only one primary oocyte), meiosis I and its products, the secondary oocytes, and meiosis II and mature gametes are illustrated horizontally. Columns A–C illustrate variants of the process resulting in different number of eggs, with the irregular cell outline for the residual cell. IK, original. like carmine, safranin and haematoxylin, where they appear as strongly staining, dense bodies. For this reason they were termed pyknotic nuclei (the Greek origin indicates thickening, compaction) and it is suggested retaining this term. Pyknotic nuclei are also found after acytokinetic mitotic divisions of auxospores (see section 3.4) and vegetative cells (see section 10.3). 5. Types of sexual reproduction 5.1. Allomixis refers to a fully sexual mode of reproduction, in which fertilization occurs between gametes derived from different individual cells (Figs 13–14). Such organisms may be either outbreeding or inbreeding, but diatoms are termed allomictic whether or not the gametes are derived from cells of different clones or from cells of the same clone, as long as the compatible gametes are produced by different individual cells. The fusion of gametes in allomictic diatoms is referred to as allogamy and the terms allomictic and allogamous can often be used interchangeably. By definition, allomictic diatoms exhibit biparental auxosporulation. 5.1.1. Gametangiogamy refers to the type of sexual reproduction observed in many allomictic pennate diatoms, in which the primary step in sexual reproduction is pairing and recognition between the gamete-producing cells (the gametangia), rather than between the gametes themselves. 5.2. Automixis refers to a form of reduced sexuality and genetic recombination in which the fertilization occurs between gametes or haploid nuclei derived from the same cell. Automixis is an extreme form of inbreeding in diatoms; at the other end of the spectrum of breeding behaviour is extreme outbreeding, comprising matings between genealogically distant cells. Automictic diatoms exhibit uniparental auxosporulation, as do apomictic diatoms. Two kinds of automixis are recognized: paedogamy and autogamy. 5.2.1. Paedogamy is a fusion of two gametes within a single gametangium; for this to be possible, cytokinesis must occur within the gametangium during meiosis and this apparently always occurs at meiosis I. Examples are Neidium cf. ampliatum (Ehrenberg) Krammer (Poulíčková 2008a; Fig. 15) and Nitzschia fonticola (Grunow) Grunow (Trobajo et al. 2006). 5.2.2. Autogamy is a fusion of two gametic (haploid) nuclei within an undivided cell after meiosis II. The fusing nuclei may be any nuclei from among the four products of meiosis II, as in Cyclotella meneghiniana (Iyengar & Subrahmanyan 1944; Fig. 16) or Pinnularia nodosa (Poulíčková & Mann 2008); alternatively, the fusing nuclei may be two sister nuclei from meiosis II, when one of the nuclei degenerates after meiosis I, as in Thalassiosira angulata (Gregory) Hasle (Mills & Kaczmarska 2006; Fig. 17). The genetic consequences of these two types of autogamy are different. 5.3. Apomixis refers to auxosporulation in which the formation of the auxospore resembles that seen in alloand automictic auxosporulation, but in which meiosis is replaced by pseudomeiosis (a process involving stages resembling meiotic prophase, but without reduction in ploidy), followed by a mitotic division, or by differentiation of a pseudozygote (a cell resembling the zygote of related allomictic or automictic species) from a diploid vegetative cell. Examples are Cocconeis placentula Ehrenberg (Geitler 1927a, b, 1973), Achnanthes cf. subsessilis Kützing (Sabbe et al. 2004) and Eunotia sp. (Chepurnov et al. 2004). 272 Kaczmarska et al. Fig. 10. Mature oogonium with egg and residual cell in Cerataulus smithii, redrawn after von Stosch (1956) with the permission of Springer Publishing. Fig. 9. Mature oogonium with two eggs in Odontella granulata, redrawn after von Stosch (1958) with the permission of John Wiley & Sons Ltd. 5.4. Haploid parthenogenesis is the development of an unfused gamete into an auxospore and subsequently an initial cell, which may divide to produce a clonal lineage of (at least initially) haploid cells. A number of examples (listed by Chepurnov et al. 2004) are known from cultures and laboratory populations but it is unknown whether the phenomenon occurs in natural populations. 6. Sexuality of allomictic diatoms General terminology The following section has caused us more difficulty than any other and represents a consensus terminology. Although many of the phenomena dealt with have been known for a long time, they have been described in a variety of ways, which are not always easily reconciled. Furthermore, the genetic and physiological bases of many of these phenomena are little known. Accordingly, supplied here is a limited set of terms, which will probably not cover all the possibilities diatoms exhibit, dealing with the characteristics for which there are most data, such as the morphology and behaviour of sex cells and sexualized clones. Consequently, the definitions and the summary presented in Table 1 can be expected to need modification and amplification in the future, to transcend what is essentially a phenotype-based terminology. In the following paragraphs overarching concepts are presented first, including the mating system (hetero- versus homothally, mating types), and then discussion of terms to describe the sexuality of individual cells and clones. With respect to the latter, the focus is on visible (primarily morphological or behavioural) characteristics. According to these, four sex phenotypes can be distinguished in diatom cells and clones: ‘male’ (= motile), ‘female’ (= non-motile), hermaphrodite (expressing both male and female characteristics), and genderless (not clearly either male or female). ‘Male’ and ‘female’ are used in a conventional sense, reflecting the sexual differentiation of gametes, gametangia and gametophytes in multicellular ‘higher’ organisms possessing motile sperm or dispersed pollen (male gametophytes) and immobile egg cells or embryo sacs in female gametophytes; in diatoms, the naming reflects differences in motility, and sometimes also in morphology. Accordingly, ‘genderless’ cells and clones are those found in isogamous diatoms (exclusively among pennate diatoms), where all gametes are moderately motile and there is no phenotypic distinction into male or female, e.g., in Eunotia Ehrenberg and some Amphora Ehrenberg ex Kützing (Geitler 1969). Genderless and cosexual Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages Fig. 11. Mature oogonium with single egg carrying one gametic and two pyknotic nuclei in Bacteriastrum hyalinum, redrawn after Drebes (1972) with the permission of Schweizerbart Science Publishers (www.schweizerbart.de). cells (see sections 6.7 and 6.10) and clones may nevertheless be differentiated biochemically (see explanatory note under section 6.8). In diatoms exhibiting physiological anisogamy, motile but non-flagellate male gametes are sometimes referred to as ‘active’ (‘+’) and the non-motile females as ‘passive’ (‘−’). However, it is probably best to avoid the implication that the females are inactive, since it is quite likely that they secrete pheromones to orient the movement of the males (cf. Sato et al. 2011). There are some inconsistencies between what is proposed here and the terminology adopted previously (e.g., Chepurnov & Mann 1997; see section 6.16). It should be noted that the classification of diatoms into heterothallic and homothallic is largely independent of the classification of gametes and clones into unisexual, male, female, cosexual, etc.: one deals with the mating system, the other with visible sexual differentiation. For example, among heterothallic diatoms, both mating types of Nitzschia palea (Kützing) W.Smith produce only cosexual gametangia (Trobajo et al. 2009) and both mating types of Amphora copulata (Kützing) Schoeman 273 & R.E.M.Archibald produce only genderless gametangia (Mann & Poulíčková 2010), whereas each mating type of Pseudo-nitzschia multiseries (Hasle) Hasle (Davidovich & Bates 1998) and Sellaphora capitata D.G. Mann & S.M. McDonald (Mann et al. 1999) expresses a different sex, male or female. Among homothallic diatoms, many centrics and Sellaphora bisexualis D.G. Mann & K.M. Evans (Mann et al. 2009) produce male and female unisexual cells within a single clone, but in other cases, all gametangia of all clones are apparently alike, being cosexual (Gomphonema parvulum (Kützing) Kützing: Geitler 1932) or genderless (Cocconeis scutellum Ehrenberg: Mizuno 1987). 6.1. Sexual potential: the intrinsic capacity of cells to develop particular sexual structures, sexual identity and behaviour, according to their mating type or sex. The potential is realized when sexualization (see section 6.2) is induced by internal and/or external factors. 6.2. Sexualization is the initiation of the process by which cells realize their sexual potential and begin gametogenesis. 6.3. Mating system: the pattern of mating and sexual interactions between individuals of a population (clonal or natural), including the balance between inbreeding and outbreeding, and whether clones are differentiated into different sexes or mating types. 6.4. Homothally refers to mating systems in which pairing cells or gametes can be derived from the same or different clones, i.e., sexual reproduction can occur intraclonally as well as interclonally and clones are self-fertile. The term was originally introduced for fungi, referring to organisms in which individual thalli (mycelia) or clones can complete the sexual cycle on their own (Whitehouse 1949, Moore & Novak Frazer 2002). Many centric diatoms appear to be homothallic (in a single clone some individual cells sexualize into oogonia, others into spermatangia) and can self-fertilize, at least in vitro (e.g., Chaetoceros didymus: von Stosch et al. 1973), as can some pennates (e.g., Pseudo-nitzschia brasiliana Lundholm, Hasle & G.A. Fryxell: Quijano-Scheggia et al. 2009). However, little is known about how homothallic diatoms mate in nature, i.e., when and/or if a number of homothallic clones of the same species sexualize at the same time and interbreed. At least some clones of homothallic centric species exhibit strategies that will result in outcrossing, e.g., a size-dependent propensity to produce, at times, only oogonia or only spermatangia (as in sequential hermaphrodites: see section 6.11.2), or different external requirements for induction of male and female gametogenesis (e.g., Lithodesmium undulatum: Manton & von Stosch 1966), which may be clone specific. 6.5. Heterothally refers to mating systems in which clones have dissimilar sexual potentials (identities) and are differentiated into two or more sexes or mating types. In these, successful syngamy generally occurs only between members of different clones having opposite but complementary 274 Kaczmarska et al. Fig. 12. Schematic representation of variants of gametogenesis in pennate diatoms. Level 1, transformation of sexualized cells into gametangia (containing primary meiocytes), which may involve prior depauperating mitoses (thus far known only in Rhabdonema); level 2, meiosis I and the secondary meiocytes; level 3, meiosis II and mature gametes. A–B, the main variants of gamete formation; C–D, the gametogeneses in Rhabdonema. (C, ‘oogenesis’; D, spermatiogenesis); the unequal secondary meiocyte at 2C indicates the production of a residual cell while the body with an irregular outline (3D) represents the residual body produced during the production of merogenous spermatium. *Case of unequal meiosis I with the production of a residual cell and only one functional gamete in Eunotia bilunaris, cf. Fig. 23. IK, original. sexes or mating types. In strictly heterothallic diatoms, each clone is fully self-sterile, e.g., Pseudo-nitzschia multiseries (Davidovich & Bates 1998, even after years in monoclonal cultures), but in other cases the different mating types or sexes may show some capacity for intraclonal reproduction. Heterothally was first applied in fungi where sexual reproduction occurs through the interaction of two different, compatible thalli (mycelia) or clones (e.g., Whitehouse 1949, Hawksworth et al. 1995). 6.5.1. In heterothallic diatoms, clones of the same sexual potential are referred to as having the same mating type and in strictly heterothallic species, successful sexual reproduction can only occur between cells of opposite or compatible mating type. In some species, the mating types differ in the kinds of gametes they produce. For example, the gametes produced by one of the mating types of Sellaphora capitata, Nitzschia longissima or Tabularia fasciculata are motile (Mann et al. 2004, Davidovich et al. 2006, 2010), whereas the gametes produced by the other mating type are nonmotile. In this case, the mating type in which the gametangia produce motile gametes can be thought of as ‘male’, while the other is ‘female’. In other cases, the mating types cannot be distinguished on the basis of the form or visible behaviour of the gametes, but in at least one case they are separable instead according to the motility of the gametangia (Gillard et al. 2013). 6.5.2. A system for naming mating types in individual diatom species has been proposed by Chepurnov et al. (2005), similar to that used in other algae to designate sexcompatible mating types (e.g., mt+ and mt–, as in Lewin 1954, albeit that the system was used there for the gametangia and gametes of green algae, which are haploid). An acronym is formed from a few letters of the genus and species names, followed by a suffix to differentiate the two (or more) mating types: + or − where the mating types differ in the activity of the gametes they produce (+ motile, − Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages 275 Fig. 14. Allogamic pair producing isogametes in a nitzschioid diatom. IK, original. Fig. 13. Allogamic pair producing anisogametes in a nitzschioid diatom. IK, original. non-motile); a number, if the gametangia are not obviously differentiated (as in some Eunotia or Amphora); or some other symbol that has a meaning in relation to the characteristics of mating. For example, in the heterothallic, morphologically isogamous diatom Pseudo-nitzschia pungens (Grunow ex Cleve) Hasle, one mating type produces motile gametes and is designated PNp+ , whereas the other produces non-motile gametes and is designated PNp− . Phenotypic expression of sexuality in allomictic diatom cells and clones Expression of sexuality in individual cells 6.6. Unisexual cells are cells expressing only one sex, ‘male’ (or ‘+’) or ‘female’ (or ‘−’) and hence producing only one type of gamete, either ‘male’ (motile) or ‘female’ (non-motile). For example, some cells of centric diatoms only produce small, flagellated sperm and others only produce large and non-motile eggs. Similarly, some cells of Pseudo-nitzschia multiseries produce two motile ‘male’ gametes, while others produce two non-motile ‘female’ gametes. However, although each sexualized cell is unisexual in centric diatoms, the clones producing them may be polysexual (as in Chaetoceros didymus, Attheya decora, Odontella longicruris (Greville) Hoban: von Stosch et al. 1973, Drebes 1977b, Hoban 2008). By contrast, in the heterothallic Pseudo-nitzschia multiseries (Davidovich & Bates 1998), each sex (producing either male or female gametangia) is expressed in a genetically different clone (= unisexual clone, see section 6.9). 6.7. Cosexual cells exhibit a type of hermaphroditism in which each cell expresses the characteristics of two sexes equally, by producing two gametes in the same gametangium, one of which is motile (‘male’), the 276 Kaczmarska et al. Fig. 15. Paedogamy in Neidium cf. ampliatum after meiosis II (upper) and plasmogamy (lower). AP, original. Fig. 16. Autogamy in Cyclotella meneghiniana, after meiosis II (left, pyknotic nucleus produced following meiosis I) and after karyogamy (right). IK, original. Fig. 17. Autogamy in Thalassiosira angulata, following meiosis II (left) and after karyogamy (right). IK, original. other non-motile (‘female’). Examples are Nitzschia recta Hantzsch (Mann 1986), N. palea (Trobajo et al. 2009), Gomphonema Ehrenberg or Cymbella C. Agardh (Geitler 1932, 1973), in which gametes are exchanged between paired gametangia. 6.8. Genderless cells are cells whose gametes express no differential morphological or behavioural characteristics during their sexual interactions with other sexualized cells: there is no difference in motility or consistent difference in size and hence no possible classification into ‘male’ or ‘female’. Examples are in Eunotia and some Amphora (Geitler 1969, 1973). Note: the designation as ‘genderless’ refers to a lack of morphological and behavioural differentiation; it does not necessarily mean that there are no biochemical differences (cryptic sexual differentiation) between the gametangia and gametes. For example, although the gametes of Amphora copulata are apparently all alike (Mann & Poulíčková 2010), this species displays heterothally, implying a biochemical differentiation between the gametangia and gametes. The same applies to ‘cosexual’ cells: although all cosexual gametangia of Nitzschia palea are visibly alike, each producing one ‘male’ and one ‘female’ gamete (Trobajo et al. 2009), this does not mean that there is no sexual differentiation between them, since this species is heterothallic. Expression of sexuality in clones (summary comparison shown in Table 1) 6.9. A unisexual clone is one producing unisexual cells of only one type during the whole sexual phase of the life cycle. There are therefore two types of unisexual clone: ‘male’ and ‘female’ clones. Clones of Sellaphora capitata (Mann et al. 1999) or Pseudo-nitzschia delicatissima (Cleve) Heiden (Amato et al. 2007) seem to be predominantly or wholly unisexual. 6.10. Cosexual clones consist entirely of cosexual cells (see section 6.7). 6.11. Polysexual clones are ones in which different individual cells express different sex phenotypes (‘male’ and ‘female’, possibly even cosexual) either simultaneously or at different times during the life cycle. These clones can also be referred to as hermaphrodite. A variety of combinations of sex–phenotype occur in polysexual clones. The same expression of sexuality may continue throughout the entire reproductive phase of a clone (constant hermaphrodites: these are also therefore simultaneous hermaphrodites, see section 6.11.1), or the sex may be labile (inconstant hermaphrodites), changing with time, progression through the life cycle and cell size (in sequential hermaphrodites, see section 6.11.2), the sex of available mates, or environmental conditions (e.g., Lithodesmium undulatum: von Stosch 1954). A wide range of hermaphroditism is also common among individuals of flowering plants and readers may find it helpful to refer to reviews of angiosperm reproductive terminology in, for example, Richards (1986), Klinkhamer et al. (1997), Barrett (2002), de Jong & Klinkhamer (2005) and Harder & Barrett (2006). Table 1. Summary of combinations of mating systems and different types of visible (morphological or behavioural) sex expression in diatoms. Mating system Separate mating type Heterothallic yes Variant Clone 1 Genderless Sex of gametangia within a clone Example Notes: 2 Cosexual all 3 Polysexual + Uncertain no 7 Genderless 5 Uni- and polysexual (‘facultative andromixis’) 6 Uni- and polysexual (‘subdioecy’) all all or all or + a few all Amphora Nitzschia No example Pseudocopulata palea yet known nitzschia (Mann & (Trobajo multiPoulíčková et al. 2009) series 2010) (Davidovich & Bates 1998) , male; , female; ? 4 Unisexual or all Homothallic or all or + a few 8 Cosexual all 9 10 11 Polysexual Constant Inconstant hermaphrodite hermaphrodite Labile Sequential hermaphrodite hermaphrodite + and/or → + → Nitzschia Coscinodiscus Navicula cryp- Gomphonema Sellaphora Lithodesmium Melosira longissima granii tocephala parvulum bisexualis undulatum varians (von (Davidovich (Drebes (Poulíčková (Geitler (Mann et al. (von Stosch Stosch 1956) et al. 2006) 1968) & Mann 1932) 2009) 1954) 2006) , cosexual; , genderless (i.e., gametes undifferentiated both morphologically and behaviourally, sexual reproduction therefore being isogamous). 278 Kaczmarska et al. 6.11.1. A simultaneous hermaphrodite is a constant hermaphrodite clone in which, concurrently, some sexualized cells produce ‘+’ (or ‘male’) gametes, whereas other cells produce ‘−’ (or ‘female’) gametes. An example is Sellaphora bisexualis (Mann et al. 2009) and probably many centric diatoms. Cosexual clones are also simultaneous hermaphrodites. 6.11.2. A sequential hermaphrodite clone is one whose cells express one sex within part of the life cycle (and cell size range), after which they switch to produce cells of a different sex. For example, some centric diatoms pass through a unisexual phase, when the clonal cells produce only oogonia, then a bisexual phase when oogonia and spermatangia are produced concurrently, and finally the alternate unisexual phase, when cells in the clone produce only spermatangia (e.g., Odontella rhombus or Melosira varians: von Stosch 1956). Further explanatory comments, including discussion of other terms sometimes used in diatoms and their relationships to those defined in sections 6.1–6.11 6.12. Clones in which all gametangia are always genderless, whatever the stage of the life cycle or circumstances or environmental conditions, could be referred to as ‘genderless clones’. However, this term is likely often to be superfluous, since it is as convenient to say that the clones are ‘isogamous’ (see section 4.2.1) 6.13. ‘Monoecy’ is sometimes applied to sexual reproduction in diatoms. In seed plants, monoecy refers to a condition in which the flowers or cones are unisexual but are borne on the same plant, which is therefore hermaphrodite. By analogy, treating a diatom clone as equivalent to an individual seed plant, most centric diatoms could be said to be monoecious, since the sperm and eggs are produced by different cells of a clone; they are also homothallic and self-fertile, at least in vitro. Another diatom that could be termed monoecious is the homothallic pennate diatom Sellaphora bisexualis, because each clone produces both male and female gametangia (Mann et al. 2009). However, monoecy and homothallism are not necessarily correlated. It is conceivable that a diatom could be heterothallic but also monoecious. Such a diatom would be self-sterile (intraclonal reproduction would be impossible) despite producing gametes of opposite sex, and fertilization would occur only between compatible gametes of opposite sex from different clones (as in outbreeding monoecious flowering plants). However, no heterothallic monoecious diatoms have yet been discovered. 6.14. Another term drawn from higher plants and sometimes applied to diatoms is ‘dioecy’. Higher plants in which male flowers or organs are borne on separate plants from the female flowers or organs are referred to as exhibiting dioecy. Hence, the term can be applied to diatoms consisting of unisexual clones (in the sense defined above, see section 6.9). Examples would be several species of Pseudo-nitzschia H. Peragallo (Amato et al. 2005), some clones of Tabularia fasciculata (Davidovich et al. 2010), or Sellaphora capitata (Mann 1989b). In all of these, each clone produces gametangia and gametes of only one type, either male or female. 6.15. ‘Subdioecy’ has been used to refer to the condition reported in the centric diatom Coscinodiscus granii, in which some clones were unisexual, but a few oogonia were occasionally formed in ‘male’ clones (Drebes 1968). Other clones of the same species isolated later from the same area of the North Sea were polysexual (Drebes 1974), as was another clone isolated from this area more recently (Schmid 1995). No centric diatom has yet been discovered that is fully and strictly heterothallic (dioecious). 6.15.1. A similar phenomenon to ‘subdioecy’ occurs also among pennate diatoms, since in a few species it has been reported that some ‘male’ clones produce a few female gametangia, allowing limited intraclonal reproduction; all other clones are purely male or female. Such clones producing mostly male gametangia but also small numbers of females can be termed ‘subandroecious’. This phenomenon has also been referred to as ‘facultative andromixis’ (because only ‘male’ clones demonstrated such sex inconstancy; Davidovich et al. 2006). It remains unclear whether this is a constitutive property of all cells within such clones, or reflects a breakdown of self-incompatibility in some cells. Examples are Nitzschia longissima (Davidovich et al. 2006) and some ‘male’ clones of Tabularia fasciculata (Davidovich et al. 2010 and references therein). If the alternative also occurs (where some female clones but no male clones produce gametangia of the opposite sex), the labile female clones could be termed ‘subgynoecious’. 6.16. Note: ‘unisexual’, ‘bisexual’ and ‘monoecious’ are used in different senses than Chepurnov & Mann (1997), who designated clones of Achnanthes longipes as ‘unisexual-1’, ‘unisexual-2, ‘bisexual’ and ‘monoecious’ on the basis of the presence and intensity of mating in pairwise combinations of clones. In this species, there are no obvious differences among gametangia or gametes in morphological or behavioural characteristics: all gametangia are ‘genderless’ in our terminology. ‘Unisexual-1’ and ‘unisexual-2’ clones of A. longipes were able to mate vigorously with each other but displayed very limited ability to reproduce intraclonally, so that, if these had been the only kinds of clones within A. longipes, the species could have been classified in our terminology as heterothallic, producing genderless gametangia. However, the existence of two other types of clone negates this classification. ‘Bisexual’ clones of A. longipes are able to mate vigorously with both ‘unisexual-1’ or ‘unisexual-2’ clones, but are unable to mate intraclonally, whereas ‘monoecious’ clones can mate freely either intraclonally or with any of the three other types of clone. Such examples are not fully understood and may be rare, but they illustrate that our current proposals are incomplete and will need to be revised in due course. Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages Fig. 18. Lateral pairing between two chains of cells in Pseudo-nitzschia pungens, schematic representation of gametangia shown at two slightly different times after meiosis II (upper, immediately after meiosis II; lower, during degeneration of the pyknotic nuclei). IK, original. 7. Copulation and fertilization In oogamous diatoms, the gametangia are not physically linked in any way and sperm are released free into the environment and swim to the egg cells to fertilize them (e.g., French & Hargraves 1985). In some anisogamous pennate diatoms too, gametes can be produced without a 1:1 pairing between gametangia (e.g., araphid Tabularia and Pseudostaurosira trainorii: Davidovich et al. 2010, 2011, Sato et al. 2011). In other anisogamous and isogamous pennate diatoms, however, the gametangia become paired through passive or active movement of vegetative or sexualized cells (as in raphid pennates), and various structures may be produced to facilitate fertilization. These structures are related to the fact that the gametes of anisogamous and isogamous pennate diatoms lack flagella and generally have no or limited capacity for autonomous motility. 7.1. Pairing is the process, prior to gametogenesis, by which two or more sexualized cells become closely associated or come into contact with each other, probably guided by sex pheromones (Sato et al. 2011, Gillard et al. 2013). There appear to be two variants: distance pairing (e.g., Eunotia bilunaris, Mann et al. 2003), where the gametangia are not, or do not need to be, in contact at any time during gametogenesis, and contact pairing, where cells must contact each other before gametogenesis will proceed (e.g., in Navicula Bory de Saint-Vincent: Poulíčková & Mann 2006). During contact pairing, which apparently occurs only in pennate diatoms (although there is insufficient information to be sure), cells commonly adopt characteristic positions in relation to each other. Thus, pairing may be lateral (often but not always girdle-to-girdle, Fig. 18), as in Navicula, Luticola D.G. Mann and Neidium (Mann & Chepurnov 2005, Poulíčková & Mann 2006, Poulíčková 2008a, b), or apical, as in surirelloid diatoms, e.g., Cymatopleura solea (Brébisson) W. Smith (Mann 1987; Fig. 19). In heteropolar diatoms exhibiting lateral pairing, the gametangia may be parallel, e.g., they have the same orientation (basepole opposite base-pole, head-pole opposite head-pole), or antiparallel, if they have opposite orientations (base-poles opposite head-poles) as in Gomphonema (Geitler 1973; Fig. 20). 7.2. Copulation is the process by which paired gametangia achieve the spatial interrelationship and physical environment for fertilization to occur. Copulation, so defined, 279 Fig. 19. Apical pairing in Cymatopleura solea, after Mann (1987) with the permission of Biopress Ltd. Fig. 20. Antiparallel position of laterally paired gametangia in Gomphonema constrictum var. capitatum, redrawn after Geitler (1973) with the permission of Springer Publishing. is restricted to pennate diatoms. Copulation may be free, where mating individuals do not produce detectable mucilaginous envelopes, e.g., Pseudo-nitzschia multiseries (Davidovich & Bates 1998) or Navicula (Poulíčková & Mann 2006), or involve the formation of special copulation structures (see below and Mann 2011). 7.2.1. The copulation envelope is a translucent mass of mucilage produced by and surrounding the gametangia. Some are diffuse (watery and visible only with differential interference contrast illumination or after staining), as in 280 Kaczmarska et al. Fig. 21. Copulation envelope in Gomphonema olivaceum, redrawn after Geitler (1932) with the permission of Elsevier. Pinnularia (Poulíčková et al. 2007) or Luticola (Poulíčková 2008b), while others are compact capsules (dense and clearly visible in LM) as in Placoneis gastrum (Ehrenberg) Mereschkovsky (Mann & Stickle 1995). Compact copulation envelopes can be divided into structured and unstructured variants, according to whether the capsule is homogeneous or differentiated into two or more layers (Fig. 21). 7.2.2. The copulation aperture is a localized opening formed between two gametangia to facilitate plasmogamy, as in Sellaphora (Mann 1989b). Analogous apertures may be present in centric diatoms to allow access of sperm to the egg cell, e.g., in Isthmia nervosa Kützing (Steele 1963) or Coscinodiscus granii (Schmid 1995). 7.2.3. Copulation tubes are formed by the fusion of two copulation papillae that grow out from the girdle region of paired gametangia, through which the gametes move to fertilize each other, e.g., Nitzschia recta (Mann 1986; Fig. 22) and Eunotia (Mann et al. 2003; Fig. 23). 7.3. Pseudocopulation is a process resembling the copulation of biparental sexual reproduction, but where each of the paired cells reproduces uniparentally, through automixis. 7.4. Fertilization or syngamy is the union of gametes to produce a zygote, comprising plasmogamy and karyogamy (see sections 7.4.1 and 7.4.2). Fertilization usually involves some movement of one or both gametes. In some cases Fig. 22. Copulation tube in Nitzschia recta, drawn after Mann (1986) with the permission of Biopress Ltd. One gametangium already with pyknotic nuclei, while the other just completed meiosis II. Fig. 23. Copulation papillae in Eunotia bilunaris, inferred after Mann et al. (2003) with the permission of John Wiley & Sons Ltd. Note the single functional gamete and a nucleated residual cell in each gametangium. this may be passive displacement, but often one or both gametes are motile, i.e., their motion is autonomous, involving flagella, pseudopodia or amoeboid movements. In some diatoms, the two sets of fusing gametes behave as a coordinated pair within a confined space, e.g., in Neidium (Mann 1984). In a few diatoms, the fertilization seems to be effected Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages by a swelling of the gametes, e.g., in Craticula Grunow (Mann & Stickle 1991). In two species of Tabularia male gametes demonstrate mobility outside the paternal thecae which involves swirling and forward movement (Davidovich et al. 2010); the mechanism of this motility, seen also in Pseudostaurosira, is not fully understood (Davidovich et al. 2011, Sato et al. 2011). 7.4.1. Plasmogamy is the fusion of cells, here of two gamete cells. 7.4.2. Karyogamy is the fusion of two or more (gametic) nuclei (contributed either by different gametes from different gametangia, or from the same gametangium). 7.4.3. In physiologically anisogamous pennate diatoms producing two gametes per gametangium, there are two main patterns of behaviour concerning the direction of gamete fusion (plasmogamy). One is the cis-type, in which the gametangia are unisexual, both gametes of one gametangium being motile, whereas the gametes of the other gametangium are non-motile, as in Mastogloia smithii Thwaites (Stickle 1986) and Pseudo-nitzschia (Davidovich & Bates 1998); both zygotes therefore lie within only one of the gametangia (the ‘female’). The other is the transtype, in which each gametangium produces one motile and one non-motile gamete (i.e., the gametangia are cosexual); each motile gamete migrates to the partner gametangium to copulate with the non-motile gamete resulting in one auxospore developing within each gametangium (e.g., Gomphonema and Neidium: Geitler 1932, Mann 1984). By definition, cosexual gametangia exhibit a trans-activity of their gametes. 7.5. A zygote is a cell produced by the fusion of gametes, irrespective of the timing of karyogamy. In many diatoms, karyogamy is delayed relative to plasmogamy, so that the gametic nuclei remain separate in the zygote and even in the auxospore (expanding stage of the zygote) derived from it. The auxosporulation of such diatoms can therefore be said to include a dikaryotic phase. 8. Auxospore types and expansion Anonymous (1975) and Ross et al. (1979) listed the following types of auxospores, categorized according to their orientation with respect to the parental cell from which the auxospore developed. 8.1. A free auxospore has no contact with parental thecae, e.g., Ditylum brightwellii (Koester et al. 2007) because the eggs are liberated from the maternal frustule to freely float in the environment. 8.2. A terminal auxospore is positioned at the end of one theca of the parent cell, as in Proboscia alata (Brightwell) Sundström (Cupp 1943) or Leptocylindrus danicus (French & Hargraves 1985; Fig. 24) 8.3. A lateral auxospore emerges from the girdle area of the parent cell and expands away from it, as in Bacteriastrum hyalinum (Drebes 1972) or Rhizosolenia imbricata Brightwell (Hoppenrath et al. 2009; Fig. 25). 281 Fig. 24. A mature terminal auxospore in Leptocylindrus danicus with a resting spore within the auxospore walls, based on P. Hargraves unpublished material, with author’s permission. IK, original. Fig. 25. A young, lateral auxospore in Rhizosolenia imbricata, after Hoppenrath et al. (2009) with the permission of Schweizerbart Science Publishers (www.schweizerbart.de). 8.4. An intercalary auxospore is flanked by parental thecae, which remain attached during, and sometimes after, auxospore enlargement, e.g., Thalassiosira angulata (Mills & Kaczmarska 2006; Fig. 26). 8.5. A semi-intercalary auxospore is flanked on one side by a parental theca and on the other by a twin 282 Kaczmarska et al. Fig. 26. An older, intercalary auxospore in Thalassiosira angulata covered with scales (note that the pattern of scale organization is exaggerated). IK, original. Fig. 27. Two young, globular, semi-intercalary auxospores in Odontella regia (a schematic composite of description by von Stosch 1982 and Hoppenrath et al. 2009). IK, original. auxospore derived from the same gametangium, e.g., Rhabdonema arcuatum (Lyngbye) Kützing (Karsten 1899) or Odontella regia (Schultze) Simonsen (von Stosch 1982, Hoppenrath et al. 2009; Fig. 27). 8.6. Isometric expansion is equal in all directions and results in auxospores becoming spherical, or bubble-like at maturity; common in non-polar centrics (and thalassiosiroids) with circular valve outlines (e.g., Fig. 1A; Coscinodiscus granii: Schmid 1995). 8.7. An anisometric auxospore expands mostly in one or few directions. Anisometric expansion may be multipolar, bipolar or unipolar. 8.7.1. Multipolar expansion proceeds in three or more directions (but all in the same plane), resulting in triangular, square or star-like shapes at maturity (Fig. 1B; Lithodesmium undulatum: von Stosch 1982). 8.7.2. Bipolar expansion proceeds in two (opposite) directions resulting in elongate cells; these are usually isopolar (Fig. 1C; e.g., Neidium sp.: Poulíčková 2008b) but sometimes expansion at one pole exceeds that at the other, producing heteropolarity. 8.7.3. A unipolar auxospore expands in only one direction, again resulting in elongate cells that may or may not be heteropolar (e.g., Cymatopleura solea: Mann 1987). 9. Auxospore envelope and wall components Soon after their formation, zygotes (or their equivalents in diatoms that reproduce apomictically) probably always form a thin organic wall outside the cell membrane. Little is known about this structure, which is called the primary zygote wall. Elements of the gamete envelopes, if any are present, may also be incorporated into this primary wall. During maturation, the zygote expands, as an auxospore, and other organic and silica elements are often added to the primary zygote wall. The primary zygote wall and parts that are subsequently added to the zygote wall (secondary elements) prior to its expansion as an auxospore compose the ‘incunabula’ (see section 9.1: literally ‘swaddling clothes’ or cradle). Subsequently, the incunabula may be ruptured and their function in protecting and constraining the shape of the zygote is taken over (in some centric and most pennate diatoms) by a new structural component of the auxospore wall, the ‘perizonium’ (see section 9.2), which is initially formed underneath the incunabula. As the auxospore expands, the incunabula may be retained as caps or they may be incorporated into the auxospore wall as its outer layers. The auxospore wall contains organic components as well as, or instead of, silicified elements. Together, the silicified and organic components of the auxospore wall help to control and accommodate directional expansion of the auxospore, building up the shapes of the vegetative cells of the next generation (von Stosch 1982, Medlin & Kaczmarska 2004). In contrast to polar centric and pennate diatoms, in some centric (mostly non-polar) diatoms there is no clear distinction between the components added to the wall by the early zygote (or even the gametes and oogonium) and those added by the auxospore (e.g., Kaczmarska et al. 2000, Idei et al. 2012). 9.1. Incunabula are the organic and inorganic components (including silicified elements) of the auxospore wall that are produced by the zygote, prior to its expansion as an auxospore (equivalent of the primary auxospore wall in Kaczmarska et al. 2000, 2001 and Medlin & Kaczmarska 2004). Incunabula may continue to surround the auxospore (including the perizonium when present) as it expands; alternatively, parts may be separated into cap-like structures covering the auxospore poles. Silicified incunabular elements are classified as described below. 9.1.1. Scales (= incunabular scales) are flat disc-shaped elements, usually with a ring-like pattern centre (an annulus), inside of which are randomly arranged pores, and which subtend a radiating system of secondary ribs that often branch dichotomously. The ribs are often masked by further silica deposition, but radial markings may still be recognizable. Diverse morphologies have been reported, including simple scales (e.g., Melosira nummuloides C. Agardh: Round et al. 1990; Fig. 28), which are circular or elliptical; distorted scales with highly irregular outlines and random perforations (in Isthmia A. Agardh: M. Idei, unpubl. obs.); slit scales, which bear a slit Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages Fig. 28. Incunabular scale in Melosira nummuloides, after Round et al. (1990, fig. 64d) with the permission of Cambridge University Press. within the area circumscribed by the annulus (in Coscinodiscus granii: Schmid 1995, fig. 2); dendroid scales (dendroid spine scales), which consist of a tree of dichotomously branching spines arising from a basal disk (e.g., Odontella aurita (Lyngbe) C. Agardh: von Stosch 1982, fig. 11h); and spinescent scales in Triceratium antediluvianum (Ehrenberg) Grunow, with bushy developments of spines (von Stosch 1982, fig. 13b). Scales are present in most centric auxospores observed so far and have also been reported in some pennates, e.g., Grammatophora marina (Lyngbe) Kützing (Sato et al. 2008b), Tabularia parva (Kützing) D.M. Williams & Round (Sato et al. 2008c), Gephyria media Arnott (Sato et al. 2004), Pseudostriatella oceanica S. Sato, Mann & L.K. Medlin (Sato et al. 2008a), Nitzschia longissima (Kaczmarska et al. 2007), Sellaphora marvanii Poulicková & D.G. Mann (Mann et al. 2011), Amphora commutata Grunow (S. Sato, unpubl. obs.), and Diploneis Ehrenberg ex Cleve (M. Idei, unpubl. obs.). Various other types of scales can be found in Round et al. (1990, fig. 63) or von Stosch (1982, figs 1c, 13b). However, no scales have been detected in some centric auxospores, e.g., Stephanodiscus Ehrenberg (Round 1982). 9.1.2. Strips (= incunabular strips) bear no perforations or fringes and are thinner and narrower than the perizonial bands. They are wound around the zygote and auxospore in a somewhat irregular manner and, particularly in the early stages of auxospore expansion, they overlap one another to make multiple layers. This contrasts with the perizonial band series, which are always exactly arranged in relation to the axis of auxospore expansion and show minimal overlap of their margins. Incunabular strips have been found in polar centric and raphid pennate diatoms, e.g., Hydrosera whampoensis (A.F. Schwarz) Deby (M. Idei, unpubl.), Pinnularia cf. gibba (Poulíčková et al. 2007) and Nitzschia fonticola (Trobajo et al. 2006; Fig. 29). 9.1.3. Plates (= incunabular plates) are structures such as in Neidium, where, in a typical form, the zygote is almost completely enclosed by a few large, flat, siliceous lateral 283 Fig. 29. Irregularly spiral incunabular strips in Nitzschia fonticola, after Trobajo et al. (2006) with the permission of John Wiley & Sons Ltd. Fig. 30. Incunabular plates consisting of helmet and lateral plates in Neidium cf. ampliatum, after Mann & Poulíčková (2009) with the permission of Czech Phycological Society. plates and two polar caps (Mann & Chepurnov 2005), which are here renamed as helmet plates to distinguish them from the incunabular caps defined below (Mann & Poulíčková 2009; Fig. 30). 9.1.4. Caps (= incunabular caps) are present in pennate diatoms, where the incunabula often split in half at the equator of the auxospore as it begins to expand and each half remains attached to one end of the auxospore as an incunabular cap (Gephyria Arnott, Pseudo-nitzschia, Nitzschia Hassall, Navicula, Luticola, Neidium: Kaczmarska et al. 2000, 2007, Sato et al. 2004, Poulíčková & Mann 2006, Poulíčková 2008b, Mann & Poulíčková 2009). These have sometimes been referred to as ‘perizonial caps’, ‘polar caps’ or ‘apical caps’, but it is now clear that they are developmentally and structurally separate from the perizonium and it is recommended that the term ‘perizonial caps’ be reserved for the structural cap element of the perizonium present at the primary poles of Surirellaceae (see section 9.2.1). 284 Kaczmarska et al. Fig. 31. A set of transverse perizonial bands converging into a suture in Rhoicosphenia curvata, after Mann (1982) with the permission of John Wiley & Sons Ltd. Fig. 32. Fine structure of a transverse perizonial band with an axial rib and lateral fimbriae. Proximal fimbriae may be reduced or absent, as in Gephyria media, after Sato et al. (2004) with the permission of John Wiley & Sons Ltd. Fig. 33. Longitudinal perizonial bands in Rhoicosphenia curvata, after Mann (1982) with the permission of John Wiley & Sons Ltd. Fig. 34. Schematic representation of auxospore wall elements and their spatial relationships in Pinnularia major, after Ishii et al. (2008) with the authors’ permission. Fig. 35. Cross-section of an idealized and hypothetical mature auxospore illustrating the spatial relationship between wall components and the initial frustule. Individual components of the wall are based on the following species: spirally arranged incunabular strips as in Nitzschia, after Trobajo et al. (2006) with the permission of John Wiley & Sons Ltd.; transverse perizonial bands and suture as in Rhoicosphenia, after Round et al. (1990) with the permission of Cambridge University Press; and primary and secondary bands of longitudinal perizonium as in Achnanthes, after Toyoda et al. (2006) with the permission of John Wiley & Sons Ltd. TW, original. 9.2. The perizonium is a part of the auxospore wall comprising silica bands or rings, hoops and strips (Figs 31–33) that is formed underneath the incunabula as the auxospore expands, apparently to control polarity and shape of the growing auxospore and hence also the species-specific shape of the initial cell. Spatial relations among these elements of the auxospore wall are illustrated in Figs 34 and 35. The perizonium usually comprises two types of bands – the transverse and longitudinal perizonial series, here referred to as the ‘transverse perizonium’ (see section 9.2.1; Figs 31–32, 34–35) and the longitudinal perizonium (see Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages section 9.2.2; Figs 33–35). However, either the transverse or longitudinal series may be absent, e.g., in Achnanthes (Toyoda et al. 2005, 2006) and Pseudo-nitzschia multiseries (Kaczmarska et al. 2000). Each series usually consists of several elements. Each perizonium, transverse or longitudinal, consists of a primary band (primary transverse perizonial band, primary longitudinal perizonial band), which is symmetrical with respect to its axial rib. The primary band is flanked on both sides by a series of secondary bands which are asymmetrical with respect to their axial ribs, having fimbria shorter or less developed on the proximal side to auxospore mid-section. Perizonial bands overlap each other from the primary band outwards. The subsequently formed bands flanking the primary band may all be similar and form a single series of secondary bands (secondary transverse series, secondary longitudinal series), or be further differentiated into secondary and tertiary bands, as in Rhoicosphenia Grunow (Mann 1982) and may subtly differ in structure. Explanatory remarks concerning the use of ‘properizonium’ and ‘perizonium’ The term properizonium (in German, Präperizonium, translated as ‘pre-perizonium’ in Drebes 1972), was originally coined by von Stosch & Kowallik (1969, p. 469) for the system of silicified bands in the auxospore walls of some polar centric diatoms: ‘Das Perizonium ist eine von der ursprünglichen Zygotenhülle unabhängige Struktur aus teleskopartig ineinandergeschobenen kolbenringähnlichen Kieselelementen, das Präperizonium ähnlich konstruiert, aber mit der ursprünglichen durch rundliche Schuppen armierten Zygotenhülle verwachsen’ (The perizonium is a structure independent from the original zygote wall, formed of ring-like silica elements that overlap each other as in a telescope. The properizonium is similarly constructed, but is knit together inseparably with the original zygote wall, which is reinforced by rounded scales [our ‘incunabula’]). However, differentiating the properizonia from the perizonia is questionable for two reasons. First, in some centric auxospores, e.g., Lampriscus shadboltianum (Greville) Peragallo, L. orbiculatum (Shadbolt) Peragallo & Peragallo and Trigonium Cleve (Idei & Nagumo 2004, M. Idei, unpubl.), the incunabula are clearly separate from and morphologically unlike the ‘properizonia’ illustrated for other multipolar centrics by von Stosch (1982). Second, the properizonia and perizonia share a similar morphology (being composed of organized series of bands) and function (constraining auxospore expansion prior to initial cell formation, von Stosch 1982, Medlin & Kaczmarska 2004). Therefore, in order to avoid terminological redundancy, it is proposed to unify the properizonia and perizonia and refer to all systems of bands and hoops that are produced by the expanding auxospore as ‘perizonia’. 9.2.1. The transverse perizonium is a system of silica bands (Figs 31–32, 34–35) in the auxospore wall – either 285 split or closed rings – oriented perpendicular to the axis of auxospore expansion. Where most or all of the transverse perizonial bands are split rings, their open ends are usually aligned with each other along one side of the auxospore to form a suture (Fig. 34); in such cases, the primary transverse perizonial band is often a closed ring, even if all other transverse bands are split or open (e.g., Rhoicosphenia curvata Kützing: Mann 1982). In other diatoms (e.g., Lithodesmium Ehrenberg, Chaetoceros Ehrenberg and Pseudostriatella S. Sato, Mann & L.K. Medlin: von Stosch 1982, Sato et al. 2008a), the complex topology of the transverse perizonial bands leaves one side of the auxospore free of perizonial bands. This leads to the formation of a clear area of varying width along that side of the auxospore. Such a clear area may be referred to as a pseudosuture (Sato et al. 2008a, figs 48, 54). The side bearing the suture or pseudosuture is defined as the ventral side of the auxospore. The initial epivalve is usually formed on the opposite or dorsal side of the auxospore. In Surirellaceae, the auxospore expansion is unipolar. The primary transverse band is replaced here by a perizonial cap at one end of the auxospore (Mann 2000, M. Idei, unpubl.). The transverse perizonium is then formed by adding secondary bands outwards from this end towards the opposite end of the auxospore (Mann 1987, figs 34–35). 9.2.2. The longitudinal perizonium is a system of long, silica bands oriented parallel to the axis of expansion of the auxospore. Longitudinal perizonial bands usually lie beneath the suture or pseudosuture of the transverse perizonium, except in some species that are known to form only a longitudinal perizonium (e.g., Achnanthes: Toyoda et al. 2005, 2006). In some longitudinal perizonia (e.g., Gephyria, Grammatophora Ehrenberg), the bands are a set of irregular, sprawly bars (Sato et al. 2004, fig. 5i, j) in which the usual differentiation into bifacial primary and unifacial secondary bands are not found (Sato et al. 2004, 2008b). In other diatoms (e.g., Rhoicosphenia curvata, Tabularia parva: Mann 1982, Sato et al. 2008c), the structure of the longitudinal perizonia is substantially the same in that sides of the primary formed band (primary longitudinal perizonial band) are flanked by two or more subsequently formed bands (secondary longitudinal perizonial bands), whereby each element is overlapped by its more central neighbour, similar to the transverse series. 9.3. The term epizonium was used by von Stosch (1982) to refer to structures that are ‘interspersed between the scale layer [incunabula in our terminology] and the much more symmetrical prozonium [perizonium in our terminology]’. It is unclear what these structures are and further research is needed before the term can be clearly defined. 10. Resting stages and vegetative reproduction Some diatoms have specialized cells that are produced via modified mitosis, physiological or cytological processes that help the diatoms perennate, resist or survive 286 Kaczmarska et al. unfavourable conditions. Two types of resting stages are known among diatoms: resting spores (see section 10.1) and resting cells (see section 10.2). While in the resting stage, these cells are thought to be incapable of size restitution except in species that produce resting spores within the auxospore (e.g., Leptocylindricus danicus: Fig. 24; French & Hargraves 1985). Terms associated with the normal mitotic cell cycle dominating diatom life history (e.g., protoplast reorganization, chloroplast and nuclear behaviour and division, valve morphogenesis) are not presented here. For this, readers are referred to Pickett-Heaps et al. (1984, 1990), Round et al. (1990) and references therein. 10.1. Resting spores are specialized cells produced in groups of four, two or one through various ontogenetic processes, including acytokinetic mitoses, and equal and unequal mitoses (sometimes resulting in the formation of incomplete or vestigial valves) during the vegetative portion of the life history (Fig. 36). Resting spores are especially common in neritic marine centric diatoms (Chaetoceros, Stephanopyxis (Ehrenberg) Ehrenberg, Detonula F. Schütt ex De Toni: von Stosch 1967), but are also known to occur in some freshwater centrics (Aulacoseira Thwaites, Urosolenia Round & Crawford, Acanthoceras Honigmann: Edlund & Stoermer 1993, 1997, Edlund et al. 1996) and have been reported in a few pennate taxa including Eunotia soleirolii (Kützing) Rabenhorst (von Stosch & Fecher 1979) and Craticula cuspidata (Kützing) D.G. Mann (Schmid 1979). Spores are morphologically differentiated from vegetative cells and often have heavily silicified cell walls with modified morphology. Spores have recognizable and often differing epi- and hypospore valves, rarely with girdle elements. Resting spores are thought to provide a measure of dormancy or grazing resistance (von Stosch & Fecher 1979, Hargraves & French 1983, Itakura et al. 1999), require special conditions to germinate (von Stosch & Fecher 1979) and are rarely produced within the sexual auxospore, e.g., Leptocylindricus danicus (Fig. 24; French & Hargraves 1985) and Cerataulina pelagica (Cleve) Hendey (Saunders 1968). Because true auxospores rarely function as resting stages, the term auxospore is an unfortunate misnomer, in that it is not a resistant dispersal unit or a dormant stage as is the case in some other algae. The term auxospore became accepted before the function of auxospores was understood and is too well established now to change it. The types of resting spores listed below and illustrated in Fig. 36 are modified from von Stosch (1967), Syvertsen (1979) and Round et al. (1990), and they reflect only the relationship between the mature spore and the spore parent cell and not always the ontogeny of spore production (see von Stosch 1967 and references therein). Some species are known to produce several spore types (e.g., Thalassiosira nordenskioeldii Cleve: Round et al. 1990, fig. 43). 10.1.1. Exogenous resting spores: groups of two or four mature resting spores, produced by normal mitoses, that Fig. 36. Resting spore types and their genesis. Thick-walled spore types are determined by their relation to the spore parent cell and compared with the products of normal vegetative reproduction. Top to bottom: a vegetative cell undergoing normal vegetative divisions and resulting progeny; production of two exogenous resting spores; two semi-endogenous spores are each partially enclosed by a parental theca and a residual cell with a vestigial valve; a single endogenous resting spore surrounded by the parental frustule and two residual cells with vestigial valves, adapted after Round et al. (1990) with the permission of Cambridge University Press, and based in part on Thalassiosira, after Syvertsen (1979) with the permission of Schweizerbart Science Publishers (www.schweizerbart.de). are not enclosed in the parent frustule (e.g., Detonula confervacea (Cleve) Gran, Thalassiosira nordenskioeldii, T. antarctica Comber: von Stosch 1967, Syvertsen 1979). 10.1.2. Endogenous resting spores: a single or pair of mature resting spores whose epi- and hypovalves are produced by unequal or acytokinetic mitoses; spores remain completely enclosed in the parent frustule (e.g., Chaetoceros socialis Lauder, Urosolenia eriensis (H.L. Smith) Round & Crawford, Acanthoceras zachariasii (Brun) Simonsen, Aulacoseira skvortzowii M.B. Edlund, E.F. Stoermer & C.M. Taylor: von Stosch 1967, Syvertsen 1979, Edlund & Stoermer 1993, Edlund et al. 1996, McQuoid & Hobson 1996). 10.1.3. Semi-endogenous resting spores: mature spore hypovalves of a spore pair remain enclosed in half of the parent frustule, with the spore epivalve exposed to the environment. Spore hypovalves are produced by unequal or Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages 287 Fig. 37. A chain of vegetative (upper) and resting (lower) Aulacoseira cells illustrating the difference between protoplast organizations in the two cell types. MBE, original. acytokinetic mitoses (e.g., Stephanopyxis turris (Greville) Ralfs, Ditylum brightwelli, Aulacoseira italica (Ehrenberg) Simonsen: von Stosch 1967, Edlund et al. 1996). 10.2. Resting cells are physiologically and cytologically modified cells characterized by metabolic/photosynthetic dormancy and a centrally condensed protoplast (Fig. 37), usually with unmodified or only slightly modified valve morphology (e.g., thicker valves in some Aulacoseira species: Jewson et al. 2008). Resting cells function as a perennation strategy and are especially common among freshwater plankton including centric and araphid taxa (Sicko-Goad et al. 1989, Jewson 1992). Heavily silicified winter stages in Eucampia antarctica (Ehrenberg) A. Mann are metabolically active, as indicated by their mitotic divisions in this and other species (Fryxell & Prasad 1990, von Quillfeldt 2001) and may represent yet another form of survival strategy (seasonal stages). Other terms often used especially (but not exclusively) in relation to the vegetative phase of the life cycle 10.3. Acytokinetic mitosis: a mitotic nuclear division that is not followed by complete cell division or cytokinesis; each acytokinetic mitosis is followed by the production of only one valve following vegetative enlargement (Fig. 2) or internal valve (Figs 38–39) or spore valve (Fig. 36) production and degeneration of one of the two nuclei, which becomes pyknotic. Acytokinetic mitoses occur also during some gametogeneses (see section 4.5) and precede production of initial epi- and hypovalves (see section 3.4). 10.4. Unequal cytokinesis: a mitotic cell division that unequally cleaves the mother cell to produce two diploid sibling cells of unequal size. Unequal cytokineses are common in the production of resting spores (Fig. 36) and internal valves (Figs 38–39). They also occur during gametogenesis, e.g., at meiosis I in some diatoms (e.g., Cerataulus smithii, Sellaphora: von Stosch 1956, Mann 1989b). Fig. 38. Types of internal valve formation in Hantzschia amphioxys (upper centre). Normal mitosis produces typical vegetative cells (upper right); two unequal mitoses produce a single resting internal cell surrounded by heavily silicified internal valves and enclosed between two residual cells with lightly silicified vestigial valves and small amounts of cytoplasm (upper left, lower left); unequal mitosis may also result in a residual cell(s) with little more than a nucleus and a parental valve (lower centre); an acytokinetic division results in a single internal spore containing both resulting nuclei, one being pyknotic (lower right). MBE original, adapted after Round et al. (1990) with the permission of Cambridge University Press, and Geitler (1980) with the permission of Springer Publishing. 10.5. Internal valves are one or more morphologically differentiated valves produced within vegetative cells following mitosis and unequal cytokineses or acytokinetic 288 Kaczmarska et al. Fig. 40. Supernumerary valves in resting spores of Melosira dickiei, showing normal vegetative valves (upper left), while the lower left and the right frustule in surface view illustrate resting spores with supernumerary valves, adapted after van Heurck (1880–1885). Fig. 39. Internal valve formation in Meridion circulare, cytology following Geitler (1971). Vegetative valve (upper left); normal mitotic cell division with resulting two vegetative cells (upper right); the lower panel shows that the internal valve production in Meridion involves first a mitosis to produce two acostate internal valves, followed by an unequal mitosis that results in two internal cells surrounded by heavily silicified internal valves with a small amount of cytoplasm segregated between two residual cells each with a pyknotic nucleus and sometimes a vestigial valve (not shown). MBE, original. mitoses (Figs 38–39). Internal valves may serve as structures resistant to osmotic stress or desiccation and are often more thickly silicified and have modified ornamentation compared with vegetative valves. Cells encased in such internal valves may be considered endogeneous resting spores if they act as dormancy stages and require special conditions to germinate (von Stosch & Fecher 1979, Round et al. 1990). Internal valves are known from many genera including Melosira (Houk et al. 2010), Eunotia (von Stosch & Fecher 1979), Fragilariforma D.M. Williams & Round (M. Edlund, unpubl.), Meridion C. Agardh (Geitler 1971, Kingston 2003; Fig. 39), Achnanthes (Geitler 1980), Entomoneis Ehrenberg (as Amphiprora: Geitler 1970), Gomphonema (Kociolek & Stoermer 1991), Hantzschia Grunow (Geitler 1980) and Pinnularia (Edlund & Stoermer 1997). 10.6. Supernumerary valves are structures known from a few species producing multiple series of internal valves, which are termed supernumerary valves, e.g., Melosira dickiei (Thwaites) Kützing (Houk et al. 2010; Fig. 40) and Eunotia serpentina Ehrenberg (Hustedt 1927–1966). Supernumerary valves are not associated with sexual reproduction and are thought to be produced within the original vegetative frustule following multiple acytokinetic divisions. 10.7. The craticular plate (= craticular valve, craticula) is an endogenously produced ‘roughly structured silica scaffold’ (Schmid 1979) that lies internal to a normally structured valve and seems usually to be produced in response to osmotic stress. In the genus Craticula, the craticular valve may in turn be external to a third type of modified valve, the ‘heribaudii’ valve. The valves and craticular plate (Fig. 41) together likely provide a measure of protection from desiccation (Schmid 1979). The craticula and ‘heribaudii’ valves are morphologically very different from most internal valves and from the post-sexual initial valves produced within an auxospore. 10.8. Abrupt (or rapid) size reduction is a sudden decrease in valve size following (usually) a series of asymmetrical mitotic divisions (with non-planar or oblique cleavage) to produce significantly smaller cell lines, as in the araphid pennates Asterionella Hassall, Ulnaria (Kützing) P. Compère [= Synedra] and Tabularia (Nipkow 1927, Locker 1950, Roessler 1988, Kling 1993, Davidovich et al. 2010; Fig. 42), and in the raphid pennate Pseudo-nitzschia (Chepurnov et al. 2005). This process may be adaptive in bringing cells more rapidly into the inducible size range for sexual reproduction or conferring an advantage in nutrient uptake (Kling 1993), because of the change in the surface area:volume ratio, and is probably more common than the few reports suggest. Proposals for a terminology for diatom sexual reproduction, auxospores and resting stages 289 Fig. 41. Valve types and craticular plates within a resting spore of Craticula cuspidata. Left to right: vegetative valve; craticula or craticular plate; ‘heribaudii’ valve (recognized as ‘var. heribaudii’ in older classifications); a complete resting spore encased in an envelope of sand and detritus cemented by dried jelly-like compounds, illustrating the spatial relationship among the spore components. MBE, original; the drawing on the extreme right is redrawn after Schmid (1979) with the permission of Springer Publishing. major lineages of diatoms, such as the Rhaphoneidaceae– Plagiogrammaceae–Asterionellopsis clade (Medlin et al. 2008, Ashworth et al. 2012). Further, with a few rare exceptions (e.g., Sellaphora), very few species have been systematically investigated over the duration of their sex life and mated with a wide enough range of partners to consider observed behaviours constant and sex linked. We are also, only now, just beginning to learn how many loci may be involved in sex determination in diatoms (Vanstechelman et al. 2013), or what conditions modulate their expression [cell-life stage (Armbrust & Galindo 2001), type of mate or environment, etc.]. Therefore, we emphasize that the current proposals will almost certainly be expanded and amplified as new discoveries add to a better understanding of the fascinating field of diatom reproductive biology. The goal of this proposal is to help to generate more interest in this field and to facilitate communication of these new findings. Fig. 42. Multiple size-classes of cells in a single colony of Ulnaria ulna following two instances of mitotic abrupt size reduction. MBE, original based on Roessler (1988) with the permission of Allen Press Publishing Services. 11. Concluding remarks In closing, we wish to point out that although great progress has been made since the 1980s, our understanding of diatom life cycles is still meagre and patchy. For example, to date, there are no reports of auxosporulation in some Acknowledgements The authors are grateful to Oriha Ishii (Tokyo University for Marine Science and Technology) for allowing us access to her poster presented at the 20th International Diatom Symposium and for sharing her unpublished observations. We thank K. Sabbe and two anonymous reviewers for many helpful formative comments. J.M. 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