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29 Adaptation (1)

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ADAPTATION
BIO 203L, lecture 29
08 Apr 2024
Darwin’s big question
How do organisms become so well matched to their speci c environmental circumstances?
Desert and rainforest plants
fi
fl
Arctic Fox and Willow Ptarmigan
Leaf and ower mimics
Darwin’s question
How do organisms become so well matched to their speci c environmental circumstances?
eBird and Petr Simon
Possible answers:
Magic
Species move into suitable habitats
Species adapt to local environments
fi
fl
Sword-billed Hummingbird and Datura owers
Adaptation is inevitable if . . .
A population contains genetic variation
Some of that genetic variation in uences traits
Some traits are more advantageous than others in that environment
adaptation
frequency
population in generation n + 1
population in generation n
fl
trait value
Learning objectives
• Understand how populations respond to changes in the environment
• Understand how to distinguish directional selection from drift
• Understand the genetic basis for some examples of adaptation
• Learn how to predict responses to selection using the breeder’s equation
• Understand how continued adaptation leads to phenotypic divergence
Case study: antibiotic resistance
Evolution of antibiotic resistance in real time: experimental set-up
E. coli
increasing antibiotic concentration
Gigantic “petri dish” 60 x 120 cm (~ 2 x 4 ft) with antibiotic in increasing concentrations
Inoculated at extreme ends with E. coli that completely lack drug resistance
Recorded images over 12 days of bacterial growth —> converted into a movie
Baym, B, et al. (2016) Science 353:1147-1151
Mark Rausher
Science
E. coli
Evolution of antibiotic resistance in real time: experimental set-up
Bacteria added in stripes on plate ends
Quickly ll no-antibiotic zone up to “wall”
A few break into 1X zone but most can’t
Early 1X invaders expand and hit next “wall”
Additional cells break into 1x zone
Mark Rausher
A few break into the 10X zone
fi
fi
1x zone starts to ll up … and so forth
Science
Evolution of antibiotic resistance
Progressive mutations allow adaptation to highest concentration
1000X
100X
Science
10X
1X
0
Each invasion into the next highest concentration happens at speci c locations
Those locations correspond to clones of cells carrying a new adaptive mutation
fi
Mutant cells invade and use resources, crowding out later mutants that also invade
Science
Is progressive adaptation faster?
One big step from no antibiotic to 3000X takes the longest (left; 250 hours)
Having an intermediate step always speeds up adaptation to 3000X (other 3 panels)
Step size matters; best is having intermediate step sizes that increase by 10X
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