Recombinant DNA Technolgoy Esther Sparks, Bri'an Barrow, Michaela Palmer, Brianna Walters, Arielle Johnson Presentation Outline What is Recombinant DNA Technology Steps Involved In Recombinant DNA Technology Examples What is Recombinant DNA Technology? WHAT IS RECOMBINANT DNA TECHNOLOGY? Recombinant DNA technology involves using enzymes and various laboratory techniques to manipulate and isolate DNA segments of interest. This method can be used to combine (or splice) DNA from different species or to create genes with new functions. WHAT IS RECOMBINANT DNA TECHNOLOGY? Recombinant DNA is the name given to DNA formed after a piece of DNA from a donor organism is joined to a piece of DNA from another organism. If it is inserted into a bacterium, it will replicate or clone itself and as the bacterium multiplies, the recombinant DNA will multiply. The piece of DNA to be cloned is combined with either a plasmid or the DNA of a bacteriophage. Plasmids are small circular pieces of DNA found in bacteria. They are separate from the bulk of the DNA and can replicate independently of the rest of the DNA. Bacteriophages are viruses which can ‘inject’ their DNA into bacteria for replication. The plasmid or bacteriophage is known as the vector or cloning vector, because it acts as a carrier for the DNA to be cloned. Steps Involved in Recombinant DNA Technology 1) DNA ISOLATION Isolation of DNA is an enzymatically controlled process where the plant or animal cells are treated with certain enzymes. Firstly the cell membrane of the cell with the desired gene is broken using a lysis buffer. This process is known as cell lysis. Afterwards, the DNA is extracted in its purest form, meaning it is devoid of macromolecules such as RNA, polysaccharides, proteins and lipids. Because DNA coexists with these macromolecules it is necessary for it to be purified using the enzymes such as ribonucleases, proteases and lipases. After these macromolecules are removed, the DNA sample is then washed in isopropanol and then in ethanol and it precipitates out as fine threads as a result of the presence of ethanol. In terms of insulin production, the gene for human insulin is isolated in this way. 2) CUTTING OF THE DNA/ RESTRICTION ENZYME DIGESTION The isolated and purified DNA is treated with restriction endonucleases which cut the DNA into fragments. This is accomplished by the incubation of the target DNA molecule with restriction enzymes at the appropriate enzymatic conditions. The restriction endonucleases are sequencespecific, so they inspect the length of DNA and trim it at particular sites known as the restriction site. Restriction digestion results in the production of blunt ends (ends of a DNA molecule that ends with a base pair) or sticky ends (ends of a DNA molecule that end with a nucleotide overhanging). They are called ‘sticky ends’ because they can be used to rejoin fragments of DNA. They stick together by forming hydrogen bonds to complementary sticky ends from other DNA molecules (in this case the plasmid or bacteriophage DNA) 2) CUTTING OF THE DNA/ RESTRICTION ENZYME DIGESTION The desired insulin gene and the vector is snipped by the same restriction enzymes to acquire the complementary sticky ends. This ensures the task of ligases for binding the required gene to the vector is easier. In insulin production, a bacterial plasmid is isolated and cut open using restriction enzymes, creating a vector for the insulin. 3) AMPLIFICATION USING PCR Copies of genes are amplified through PCR or polymerase chain reaction. It is essentially a process to increase a single DNA copy into several copies after the desired gene of interest is cut with restriction enzymes. It allows a single copy or a few copies of DNA to be amplified into thousands or millions of copies. The following components are used in PCR reactions . 3) AMPLIFICATION USING PCR The following components are used in PCR reactions that are conducted on 'thermal cyclers': Template: DNA that has to be amplified. Primers: oligonucleotides are tiny, chemically produced molecules that are complementary to a DNA region. Enzyme: DNA polymerase. Nucleotides: The enzyme is required to lengthen the primers. PCR can be used to amplify the cut DNA fragments, which can subsequently be ligated with the cut vector. Note, Polymerase Chain Reaction (PCR) is not typically used in the production of insulin, as it is primarily used to amplify specific DNA sequences. 4) LIGATION OF DNA MOLECULES/ JOINING OF DNA The vector and a section of DNA are joined in this step. It is achieved with the help of the enzyme DNA ligase. With the same restriction enzyme, the pure DNA and the vector of interest are cut.This yields the cut DNA fragment and the cut vector, both of which are now open. Ligation is the process of putting these two parts together with the enzyme 'DNA ligase.' The resulting DNA molecule is a hybrid of the interest molecule and the vector DNA molecules. Recombination is the term used in genetics to describe the merging of different DNA strands. As a result, this new hybrid DNA molecule is known as a recombinant DNA molecule, and the process is known as recombinant DNA technology. In this step, the insulin gene and the plasmid vector are ligated together using DNA ligase, forming a recombinant plasmid. 5) INSERTING DNA INTO A HOST In this stage, the process of adding rDNA to the recipient host cell, which is most commonly a bacterial cell, takes place and this procedure is termed ‘transformation’. Afterwards, the recombinant DNA multiplies and manifests as manufactured protein under favorable conditions. Additionally, as since bacterial cells have a hard time accepting foreign DNA, treatments to make them 'capable' of accepting new DNA such as thermal shock, calcium ion therapy, electroporation, and other procedures are administered. The recombinant plasmid containing the insulin gene is introduced into host cells, such as bacteria or yeast, through a process called transformation. The host cells take up the recombinant plasmid and become transformed. 5) INSERTING DNA INTO A HOST 6) ISOLATION OF RECOMBINANT CELLS As a result of the insertion of the rDNA into a host cell(transformation process), a mixed population of converted and non-transformed host cells is formed and during the stage of isolating the recombinant cell, only the transformed host cells are filtered. In distinguishing recombinant cells from nonrecombinant cells, the marker gene of the plasmid vector/ selectable marker is used. By recombinant cell isolation the cells having the gene of interest can be grown on a small or large scale. Transformed host cells containing the recombinant plasmid are selected for and isolated. This is typically done by using a selectable marker, such as antibiotic resistance, that is included on the plasmid. The transformed cells are then grown in large fermentation tanks to produce insulin, which is harvested and purified. 6) ISOLATION OF RECOMBINANT CELLS Once a sufficient amount of insulin has been produced by the bacteria, they are harvested .The insulin is then extracted from the bacterial cells and purified to remove any bacterial components and other impurities. Finally, the purified insulin is formulated into the desired form (e.g., solution, powder) and packaged for medical use. Diagram Showing Insulin Production More Examples GOLDEN RICE 1. Gene Cloning: The isolated genes are cloned, typically into a plasmid vector, which serves as a carrier for the foreign genes. 2. Transformation of Rice Cells: The cloned genes are introduced into rice plant cells using a method such as agrobacterium-mediated transformation or biolistic bombardment (gene gun). This process can be performed in tissue culture under controlled conditions. 3. Integration into Rice Genome: The introduced genes integrate into the rice genome, often at random locations. This step is critical for stable inheritance of the desired trait in subsequent generations of rice plants 4. Regeneration of Transgenic Rice Plants: The transformed rice cells are cultured to regenerate whole plants. This involves selecting and nurturing cells that have successfully incorporated the foreign genes and developed into viable plants. Diagram Showing Golden Rice Production RECOMBINANT VACCINNES https://www.youtube.com/watch?v=DgDDw2gQJx0 QUESTIONS 1. Name the all six steps of Recombinant DNA Technology in order 2. Give 3 examples of Recombinant DNA Technology Thank you! REFERENCE https://www.britannica.com/science/recombinant-DNAtechnology/Creating-the-clone (additional information) https://www.youtube.com/watch?v=8cYvyYOjzOc (information on DNA isolation) https://www.vedantu.com/biology/recombinant-dnatechnology (information on the steps for recombinant DNA technology) https://www.genscript.com/what-is-restrictiondigestion.html#:~:text=Restriction%20digestion%20is%20acco mplished%20by,outside%20of%20the%20recognition%20seque nce. (information on restriction enzymes) REFERENCE https://www.evitria.com/journal/recombinantantibodies/recombinant-dna-technology/ https://www.nlm.nih.gov/exhibition/fromdnatobeer/exhibitioninteractive/recombinant-DNA/recombinant-dna-technologyalternative.html#:~:text=Recombinant%20DNA%20is%20a%20te chnology,insulin%20gene%20in%20the%20laboratory. (examples) https://www.vedantu.com/biology/recombinant-dnatechnology (rDNA insertion into host, isolation of recombinant cells)