Because learning changes everything. ® Chapter 6 Microbial Nutrition and Growth Microbiology FUNDAMENTALS A Clinical Approach Fourth Edition Marjorie Kelly Cowan Heidi Smith Jennifer Lusk Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. Learning Outcomes Section 6.1 1. List the essential nutrients of a bacterial cell. 2. Differentiate between macronutrients and micronutrients. 3. List and define four different terms that describe an organism’s sources of carbon and energy. 4. Define saprobe and parasite, and explain why these terms can be an oversimplification. 5. Compare and contrast the processes of diffusion and osmosis. 6. Identify the effects of isotonic, hypotonic, and hypertonic conditions on a cell. 7. Name two types of passive transport and one type of active transport. Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 2 Microbial Nutrition – Review of Terms Essential nutrient • any substance that must be provided to an organism Macronutrients • required in relatively large quantities and play principal roles in cell structure and metabolism Micronutrients • present in much smaller amounts and are involved in enzyme function and maintenance of protein structure Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 3 Categorizing Nutrients According to Their Carbon Content - Review of Terms Inorganic nutrients • an atom or simple molecule that contains a combination of atoms other than C and H Organic nutrients • contain carbon and hydrogen atoms and are usually the products of living things Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 4 Table 6.1 5 What Microbes Eat – Review of Terms Heterotroph: an organism that must obtain its carbon in an organic form Autotroph: an organism that uses inorganic CO2 as its carbon source Phototroph: microbe that photosynthesizes Chemotroph: microbe that gets its energy from chemical compounds Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 6 Table 6.2 7 Table 6.3 8 How Microbes Eat: Transport Mechanisms – Review of Terms Transport of necessary nutrients occurs across the cytoplasmic membrane, even in organisms with cell walls Diffusion • atoms or molecules move in a gradient from an area of higher density or concentration to an area of lower density or concentration Osmosis • the diffusion of water through a selectively, or differentially, permeable membrane Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 9 Osmosis Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 10 Cell Responses to Osmosis Access the text alternative for slide images. Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 11 Transport Processes in Cells Passive Active Examples Description Energy Requirements Simple diffusion A fundamental property of atoms and molecules that exist in a state of random motion None. Substances move on a gradient from higher concentration to lower concentration. Facilitated diffusion Molecule binds to a specific receptor in membrane and is carried to other side. Moleculespecific. Goes both directions. Rate of transport is limited by the number of binding sites on transport proteins. None. Substances move on a gradient from higher concentration to lower concentration. Carriermediated active transport Atoms or molecules are pumped into or out of the cell by specialized receptors. Driven by ATP or the proton motive force Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 12 Endocytosis: Eating and Drinking by Cells – Review of Terms Endocytosis • cell encloses the substance in its membrane • simultaneously forms a vacuole and engulfs the substance • Phagocytosis • accomplished by amoebas and white blood cells • ingest whole cells or large solid matter • Pinocytosis • ingestion of liquids such as oils or molecules in solution Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 13 Concept Check Which of the following terms describes an organism that derives its energy and carbon from organic molecules? A. Photoautotroph B. Chemoheterotroph C. Lithoautotroph D. Chemoautotroph E. Photoheterotroph Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 14 Learning Outcomes Section 6.2 8. List and define five terms used to express the temperature-related growth capabilities of microbes. 9. Summarize three ways in which microorganisms function in the presence of differing oxygen conditions. 10. Identify three important environmental factors (other than temperature and oxygen) with which microorganisms must cope. 11. List and describe the five types of associations microbes can have with their hosts. 12. Discuss characteristics of biofilms that differentiate them from planktonic bacteria. Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 15 Cardinal Temperatures • Minimum temperature • the lowest temperature that permits a microbe’s continued growth and metabolism - below this temperature, its activities stop • Maximum temperature • the highest temperature at which growth and metabolism can proceed before proteins are denatured • Optimum temperature • an intermediate between the minimum and the maximum that promotes the fastest rate of growth and metabolism Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 16 Psychrophiles • optimum temperature below 15°C • capable of growth at 0°C • obligate with respect to cold and cannot grow above 20°C Psychrotolerant • grow slowly in the cold but have an optimum temperature between 15°C and 30°C Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 17 Figure 6.5 18 Mesophiles • majority of medically significant microorganisms • grow at intermediate temperatures between 20°C and 40°C • human pathogens have optimal temperatures between 30°C and 40°C Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 19 Thermoduric Microbes • can survive short exposure to high temperatures but are normally mesophiles • common contaminants of heated or pasteurized foods • Examples are heat-resistant endospore formers such as Bacillus and Clostridium Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 20 Thermophiles • grow optimally at temperatures greater than 45°C • live in soil and water associated with volcanic activity, compost piles, and in habitats directly exposed to the sun • vary in heat requirements with a range of growth of 45°C to 80°C Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 21 UnFigure 6.13 22 Gases O2 and CO2 - atmospheric gases that influence microbial growth • O2 • has the greatest impact on microbial growth • an important respiratory gas • a powerful oxidizing agent Three categories of microbes 1. those that use oxygen and detoxify it 2. those that can neither use oxygen nor detoxify it 3. those that do not use oxygen but can detoxify it Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 23 How Microbes Process Oxygen As oxygen enters cellular reactions, it is transformed into several toxic products • Singlet oxygen (O) • Hydrogen peroxide (H2O2) • an extremely reactive molecule • build up can damage and destroy a cell by the oxidation of membrane lipids • Superoxide ion (O2 –) • toxic to cells and used as a disinfectant • Hydroxyl radical (OH–) • highly reactive • highly reactive Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 24 How Microbes Protect Themselves Against Damage from Oxygen By-products Most cells have developed enzymes that scavenge and neutralize reactive oxygen by-products • Two-step process requires two enzymes: Superoxide dismutase Step 1. 2O 2 2H H 2 O 2 (hydrogen peroxide) O 2 Step 2. Catalase 2H 2 O 2 2H 2O O 2 Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 25 Oxygen Usage and Tolerance Patterns in Microbes (1) Aerobes • can use gaseous oxygen in their metabolism • possess the enzymes needed to process toxic oxygen products • an organism that cannot grow without oxygen is an obligate aerobe Microaerophiles • are harmed by normal atmospheric concentrations of oxygen • but require a small amount of it in metabolism Facultative anaerobes • do not require oxygen for metabolism • but use it when it is present (Top) Source: CDC/Laura Rose & Janice Haney Carr (Aerobess); (Bottom) Heather Davies/Science Source (Microaerophiles)a Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 26 Oxygen Usage and Tolerance Patterns in Microbes (3) Anaerobes • lack the metabolic enzyme systems for using oxygen in respiration • Obligate anaerobes also lack the enzymes for processing toxic oxygen and die in its presence Aerotolerant anaerobes • do not utilize oxygen • but can survive and grow to a limited extent in its presence • not harmed by oxygen, mainly because they possess alternate mechanisms for breaking down peroxides and superoxide (Top) Source: CDC/Janice Carr (Anaerobes); (Bottom) Janice Haney Carr/CDC (Aerotolerant anaerobes) Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 27 Figure 6.6 28 Carbon Dioxide Capnophiles • organisms that grow best at a higher CO2 tension than is normally present in the atmosphere • growing specimens in clinical settings require higher CO2 tension Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 29 pH • the degree of acidity or alkalinity of a solution • expressed by the pH scale – 0 - 14 • 7.0 is the pH of pure water • pH value decreases - the acidity increases • pH value increases - the alkalinity increases The majority of organisms live or grow in habitats between pH 6 and 8 Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 30 pH Extremes Acidophiles Alkalinophiles • organisms that thrive in acidic environments • organisms that thrive in alkaline conditions • Euglena mutabilis • Natronomonas • grows in acid pools between pH 0 and 1 • Thermoplasma • lives in coal piles at a pH of 1 or 2 • live in hot pools and soils up to pH 12 • Proteus • can create alkaline conditions to neutralize urine and colonize and infect the urinary system Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 31 Osmotic Pressure Osmophiles • live in habitats with high solute concentration Halophiles: prefer high concentration of salt • Obligate halophiles • grow optimally at solutions of 25% NaCl but require at least 9% NaCl • Facultative halophiles • remarkably resistant to salt • though they do not normally reside in high salt environments Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 32 Radiation • phototrophs use visible light rays as an energy source • nonphotosynthetic microbes tend to be damaged by the toxic oxygen products produced by contact with light • some microbial species produce yellow carotenoid pigments to absorb and dismantle toxic oxygen • ultraviolet and ionizing radiation can be used in microbial control Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 33 Pressure Barophiles • exist under pressures that range from a few times to over 1,000 times the pressure of the atmosphere • these bacteria are strictly adapted to high pressures • they will rupture when exposed to normal atmospheric pressure Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 34 Other Organisms In all but the rarest instances, microbes live in shared habitats: • Associations • between similar or dissimilar types of microbes • with multicellular organisms, such as animals or plants • Interactions • can be beneficial, harmful, or have no particular effect • can be obligatory or nonobligatory to the members • often involve nutritional interactions Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 35 Strong Partnerships: Symbioses Symbiosis • general term to denote a situation in which two organisms live together in a close partnership Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 36 Associations but Not Partnerships Antagonism • an association between free-living species that arises when members of a community compete Synergism: • an interrelationship between two organisms that benefits them but is not necessary for survival • cooperate to produce a result that neither could do alone Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 37 Steps in Biofilm Formation Ellen Swogger and Garth James, Center for Biofilm Engineering, Montana State University Access the text alternative for slide images. Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 38 Concept Check 2 Which of the following describes partnership between microbes in which one organism is benefited and one is harmed in some way? A. Mutualism B. Synergism C. Commensalism D. Parasitism E. Antagonism Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 39 Learning Outcomes Section 6.3 13. Summarize the steps of bacterial binary fission. 14. Define doubling time, and describe how it leads to exponential growth. 15. Compare and contrast the four phases of growth in a bacterial growth curve. 16. Identify one culture-based and one non-culture-based method used for analyzing bacterial growth. Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 40 The Study of Bacterial Growth Binary fission • one cell becomes two • parent cell enlarges • duplicates its chromosome • starts to pull its cell envelope together to the center of the cell • cell wall eventually forms a complete septum Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 41 Rate of Population Growth Generation time/ doubling time • the time required for a complete fission cycle • from parent cell to two daughter cells • Generation • increases the population by a factor of two Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 42 Length of Generation Time • a measure of the growth rate of an organism • average generation time is 30 to 60 minutes • shortest generation times can be 10 to 12 minutes • most pathogens have relatively short generation times Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 43 The Mathematics of Population Growth The size of a population can be calculated by the following equation Nt = (N)2n • Nt - total # of cells in the population - t denotes “at some point in time” • N - represents the starting number of cells • exponent n - denotes the generation number • 2n - represents the number of cells in that generation Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 44 Mathematics of Population Growth 45 The Population Growth Curve Growth curve • a predicable pattern of a bacterial population growth in a closed system Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 46 Growth Curve in Bacterial Culture Access the text alternative for slide images. Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 47 The Practical Importance of the Growth Curve Important implications in controlling microbes in the environment • microbes in the exponential growth phase are more vulnerable to antimicrobial agents and heat • cells in the growth phase are more vulnerable to conditions that disrupt cell metabolism and binary fission • in general, actively growing cells are more vulnerable to growth inhibition and destruction Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 48 Analyzing Population Size Without Culturing: Turbidity Turbidity/turbidometry • clear nutrient solution becomes turbid, or cloudy, as microbes grow in it • the greater the turbidity, the larger the population size Turbidity Measurements as Indicators of Growth Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 49 UnFigure 6.20 50 Analyzing Population Size Without Culturing Counting • Direct cell count Direct Microscopic Count of Bacteria • measured microscopically • Coulter counter • electronically scans a fluid as it passes through a tiny pipette Coulter Counter Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 51 UnFigure 6.21 52 Concept Check 3 Put the steps of the bacterial growth curve in the correct order. A. Death phase B. Lag phase C. Exponential phase D. Stationary phase Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC. 53 Because learning changes everything. ® www.mheducation.com Copyright 2022 © McGraw Hill LLC. All rights reserved. No reproduction or distribution without the prior written consent of McGraw Hill LLC.