ZNOTES.ORG UPDATED TO 2023-2025 SYLLABUS CAIE IGCSE BIOLOGY SUMMARIZED NOTES ON THE THEORY SYLLABUS CAIE IGCSE BIOLOGY 1. Characteristics and Classification of Living Organisms 1.1. Characteristics of Living Organisms MRS GREN Movement: an action by an organism or part of an organism causing a change of position or place Respiration: the chemical reactions in cells that break down nutrient molecules and release energy for metabolism Sensitivity: the ability to detect and respond to changes in the internal or external environment Growth: a permanent increase in size and dry mass Reproduction: the processes that make more of the same kind of organism Excretion: the removal of the waste products of metabolism and substances in excess of requirements Nutrition: the taking in of materials for energy, growth and development 1.2. Concept and Uses of Classification System Organisms are classified into groups by the features they share. Sequence of classification: Kingdom → Phylum →Classes → Orders → Families → Genus → Species. Species are a group of organisms which can reproduce to produce fertile offspring. The Binomial System of Naming Species is an internationally agreed system in which the scientific name of an organism comprises two parts showing the genus and species. The format is Genus species. The genus is capitalized, and the species are not. The classification of organisms helps show the evolutionary relationships between them. Scientists also use the DNA base sequence to help classify organisms. The similarity in DNA chains shows how closely related two organisms are. Dichotomous keys use visible features to classify organisms. They give you a choice of two features, and you follow the one that applies: each choice leads to another choice until the organism is narrowed down to its genus and, finally, species. 1.3. The Five Kingdoms Animals: Multicellular ingestive heterotrophs (eat living organisms). Ex: cat, ladybird, newt, etc. Plants: Multicellular photosynthetic autotrophic (make their food) organism with a cellulose cell wall and chloroplasts. Ex: cactus, oak tree. Fungi: Single-celled or multicellular heterotrophic organisms with cell walls not made of cellulose, spread by spreading spores in moist/dark/warm environments. Most have hyphae and mycelium in structure. Ex: yeast, mushrooms. Prokaryotes: Single-celled organisms with no true nucleus or DNA in the cytoplasm. Many also have plasmids. Ex: E.coli, Salmonella. Protocists: Single-celled organism with a nucleus. Eukaryotes. Some are multicellular. Ex: Amoeba, seaweed. Main features of all animals: multicellular contains a nucleus but no cell walls or chloroplasts only feed on organic substances made by other living things 1.4. Animal Kingdom Mammals Fur/hair on the skin External ears (pinna) Internal fertilisation, giving the birth of young Mammary glands Reptiles Thick, dry, scaly skin Usually 4 legs Internal fertilisation, birth from egg Soft eggs Fish Wet scales Streamlined body shape External fertilisation and soft eggs Uses gills to breathe Amphibians Smooth, moist skin External fertilisation and soft eggs Gills & Lungs can live on land and water Most have 4 legs Birds Feathers on body and scales on legs Constant internal body temperature Hard eggs Internal fertilisation, birth through eggs 1.5. Arthropods Invertebrates are organisms that do not have a backbone. All arthropods have three standard features: 1. Exoskeleton WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY 2. Jointed legs 3. Segmented body Crustaceans: (e.g. crabs) Have an exoskeleton 1 pair of compound eyes 3 body segments – head, thorax, abdomen More than four pairs of legs (10-14 legs) Arachnids: (e.g. spiders) 2 body segments – cephalothorax and abdomen Four pairs of legs (8 legs) Myriapods: (e.g. centipedes) Segmented body Additional segments formed One pair of antennae 10+ pairs of legs – 1 or 2 pairs on each segment Insects: (e.g. bees) 3 body segments – head, thorax and abdomen 3 pairs of jointed legs (6 legs) 1 pair of antennae 1 or 2 pairs of wings 1.6. Classification of Plants In IGCSE Biology, the plant kingdom is classified into ferns and flowering plants. Ferns: Do not produce flowers/seeds They are plants with roots, stems and feathery leaves Reproduce by spores Flowering plants: They are plants with roots, stems and leaves Reproduce sexually by means of flowers and seeds Seeds are produced inside the ovary in the flower Monocotyledons Dicotyledons One cotyledon/One-seed leaf Two cotyledons/Two-seed leaf Parallel veins Branching veins Long Narrow Leaf Broad leaves 3 Flower Parts 4 or 5 Flower Parts Scattered Vascular Bundles Ringed Vascular Bundles 2. Organisation of the organism 2.1. Cell Structure and Organisation All living things are made of cells. New cells are produced by the division of existing cells All typical cells have: Cell membrane: controls movement in and out of cells Cytoplasm: where chemical reactions take place Nucleus: contains DNA and controls the cell Mitochondria: where aerobic respiration happens Ribosome: allows protein synthesis A typical animal cell (e.g., the liver cell) has all above Plant cells especially also have: Vacuole: cell sap to keep cell turgid Cell wall (all cells except for animal and protoctist cells have cell walls): rigid to keep the shape of the cell, strengthens the cell Chloroplasts: contain chlorophyll, which absorbs light energy for photosynthesis A typical plant cell (e.g., the palisade cell) has everything above. 1.7. Viruses Viruses are not part of any classification system due to not being considered living things. They do not carry out the seven life processes for themselves; instead, they take over a host cell’s metabolic pathways to make multiple copies of themselves. Virus structure contains only a genetic material (RNA or DNA) inside a protein coat. Example of virus structure below (No mitochondria or ribosomes) Prokaryotes DO NOT have mitochondria, rough endoplasmic reticulum and a nucleus! A bacterial cell only contains a cell wall, cell membrane, cytoplasm, ribosomes, circular DNA, and plasmids. WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY Other Forms in Magnification Formula 2.2. Levels of Organisation Actual size = image size / magnification Image size = magnification x actual size Key Terms Cells - Building Blocks of Life Tissue - Groups of cells with similar structures working together to perform a shared function Organ - Group of tissues working together to perform a specific function Organ system - Group of organs with related functions working together to perform body functions. Cell Red blood cell Function Adaptation(s) Transport of oxygen Unit Conversions (μm - micrometre) 1cm = 10mm 1mm = 1000μm Magnification does NOT have any units (‘x 50’ or ‘x 5000’) 3. Movement In and Out of Cells Diagram Biconcave/Disc shape No nucleus 3.1. Diffusion Flexible Has haemoglobin Net movement of particles from a region of their higher concentration to a region of their lower concentration (i.e. down a concentration gradient) as a result of their random movement. Energy for diffusion comes from the kinetic energy of random movement of molecules and ions. The diffusion of gases and solutes is important as without it, molecules which are needed for life, for example, glucose and oxygen for respiration, would not be able to get to the places they are needed. Water is needed as a solvent. Factors that influence diffusion: Concentration gradient Temperature Surface area Distance Long Contracts to get Muscle structures closer cell together Ciliated cell Movement of mucus in the trachea and bronchi Root Absorb mineral hair cell ions and water Many protein fibres in cytoplasm to shorten cell when energy available Tiny hairs called cilia Elongated shape for more surface area No cytoplasm so water passes freely 3.2. Osmosis No cross walls so Xylem Transport water cells connect to vessel and support plant form tube Lignin makes it strong and waterproof Regular shape so many can fit in a Palisade small space Photo-synthesises cell Many chloroplasts 2.3. Size of Specimens M agnification = size of drawing image I = = size of specimen actual A WWW.ZNOTES.ORG Net movement of water molecules from a region of higher water potential (dilute solution) to a region of lower water potential (concentrated solution) through a partially permeable membrane The role of water as a solvent in organisms to aid with digestion, excretion and transport Conc. of solute outside cell = conc. inside cell → no change in size Conc. of solute outside cell > conc. inside cell → cell shrinks (Flaccid/Plasmolysis) Conc. of solute outside cell < conc. inside cell → cell swells (Turgid) In animals: Increasing solute concentration inside a cell can cause it to burst (lysis) because it has too much water and no cell wall. In plants: Increasing solute concentration inside the cell causes the cell to become turgid, and the vacuole fills up. CAIE IGCSE BIOLOGY Decreasing solute concentration inside of the cell causes the cell to become flaccid, losing water, and the vacuole gets smaller. The cell body shrinks, pulling away from the cell wall. Plants are supported by the water pressure inside the cells pressing outwards on the cell wall. 3.3. Active Transport Proteins: Add a few drops of Biuret reagent, +ve result = purple/lilac colour Fats: Ethanol Emulsion test; ethanol is added to the mixture, and this is poured into a test tube with an equal amount of distilled water, then is shaken, +ve result = milky-white emulsion Vitamin C: Decolourisation of DCPIP shows that a vitamin C is probably present. Movement of particles through a cell membrane from a region of lower concentration to a region of higher concentration (i.e. against a concentration gradient), using energy from respiration. Carrier proteins are also used during active transport. 4.3. Structure of a DNA Chromosomes are made of a molecule called DNA DNA is also called deoxyribonucleic acid. It is embedded in the cell membrane to pick up specific molecules and take them through the cell membrane against their concentration gradient. Active transport is needed when an organism wants to optimize the nutrients it can take up - ion uptake by root hairs cell. 4. Biological Molecules Carbohydrates: made from Carbon, Hydrogen and Oxygen (CHO) Fats and oils: made from Carbon, Hydrogen and Oxygen (CHO) Proteins: made from Carbon, Hydrogen, Oxygen, Nitrogen and sometimes Sulfur (CHON{S}) Smaller molecules Larger molecules Simple sugars Starch, glycogen and cellulose Fatty acids and glycerol Fats and oils Amino acids/peptides Proteins 4.2. Food Tests Starch: Add a few drops of iodine solution (+ve result = blue-black colour, -ve result = remains brown) Reducing sugars: Add Benedict’s reagent, then the mixture is heated in a water bath for 2 to 3 minutes (70°C). (+ve result = brick-red precipitate, -ve result = remains blue) WWW.ZNOTES.ORG Each chromosome is a very long molecule of tightly coiled DNA Two strands coiled together to form a double helix Each strand contains chemicals called bases Cross-links between strands are formed by pairs of bases The bases always pair up in the same way: A and T C and G 5. Enzymes Catalyst: a substance that speeds up a chemical reaction and is not changed by the reaction Enzymes are proteins that are involved in all metabolic reactions, where they function as biological catalysts. Enzyme lowers the activation energy needed for a reaction to take place. CAIE IGCSE BIOLOGY It is important in all living organisms regarding the reaction rate necessary to sustain life. Enzymes are unchanged and can be reused Effect of Temperature Effect of pH Lock and Key (model): 6. Plant Nutrition Substrate: the molecule(s) before they are made to react, complementary to the active site. Product: the molecule(s) that are made in a reaction Different sequences of amino acids may lead to different shapes of protein molecules, as these slight differences may be deferred in their function. 5.2. Effect of Temperature on Enzymes Enzymes have an optimum temperature: the temperature at which they work best, giving the fastest reaction ≈ at 37°C in animals & humans body. When temperature increases, molecules move faster, more effectively, frequent collisions. Having more kinetic energy makes them more likely to bind to active sites. If the temperature is too high, enzyme molecules vibrate too vigorously; the enzyme is denatured, losing its shape and no longer binding with a substrate. When the temperature is too low, there is not enough kinetic energy for the reaction, so it reacts too slowly. 5.3. Effect of pH on Enzymes Enzymes are sensitive to pH. Some enzymes work best in an acid, and others in an alkaline. Enzymes work best at their optimum pH. If the pH changes, the hydrogen bond is broken, denatures the enzyme, making it no longer fit with the substrate’s active site; therefore, no reaction occurs. Pepsin in acidic conditions, Amylase in neutral conditions and trypsin in alkalinity conditions. 5.4. Graphs for Changes in Enzyme Activity Effect of Temperature WWW.ZNOTES.ORG Effect of pH Photosynthesis: the process by which plants manufacture carbohydrates from raw materials using energy from light. C arbonDioxide + Water 6C O2 + 6H2 O light+chlorophyll light+cholorophyll Glucose + Ox +C 6 H12 O6 + 6O2 The carbon dioxide diffuses through the open stomata of a plant leaf, and water is taken up through the roots. Chlorophyll is a green dye that traps light energy and converts it into chemical energy to form carbohydrates and their subsequent storage. Glucose is used for respiration, energy storage, cellulose cell wall, making proteins and sugars. Functions of the carbohydrate made from Photosynthesis starch as an energy store cellulose to build cell walls glucose used in respiration to provide energy sucrose for transport in the phloem nectar to attract insects for pollination 6.2. Investigation of Chlorophyll Take a potted plant with variegated (green and white) leaves. De-starch the plant by keeping it in complete darkness for about 48 hours. Expose the plant to sunlight for a few days. Leaf boiled in water for 2 minutes to break down cell walls, denature enzymes and allow for easier penetration by ethanol. Warmed in ethanol until the leaf is colourless to extract chlorophyll, which would mask the observation Dipped into the water briefly: to help soften the leaf The leaf is placed on a white tile, and iodine is added. If starch is present, the colour will be blue-black; if absent, it will remain brown. CAIE IGCSE BIOLOGY 6.3. Investigation of Light De-starch the plant by keeping it in darkness for 48 hours Place a stencil over part of a leaf Place the leaf in sunlight for 4-6 hours Remove the stencil and test for starch +ve result = parts which received light turn blue-black -ve result = parts which didn’t receive light remains brown 6.5. Limiting Factors Limiting Factors: something present in the environment in such short supply that it restricts life processes. Light Intensity As the amount of light increases, the rate of photosynthesis increases (ab) The limiting factor is light 6.4. Investigation of Carbon Dioxide Take two de-starched potted plants. Cover both the plants with bell jars and label them A and B. Inside A, keep N aHC O3 (Sodium Bicarbonate). It Increasing the amount of light after a certain point does not affect the rate (c) The limiting factor is now carbon dioxide or temperature produces C O2 . Inside B, keep N aOH (Sodium Hydroxide). It absorbs C O2 . Keep both set-ups in the sunlight for at least 6 hours. Perform the starch test on both plants. The leaves of Plant A will turn black after the starch test The leaves of Plant B will remain brown after the starch test Hydrogencarbonate indicator - measures the carbon dioxide concentration WWW.ZNOTES.ORG 6.6. Leaf Structure Most dicotyledonous plant leaves have a large surface area and are thin. Cuticle: the waxy layer that prevents water loss from the top of the leaf Upper/Lower Epidermis: transparent cell that allows sunlight to pass through to the palisade cell Palisade mesophyll: is found at the top of the cell and contains many chloroplasts that absorb sunlight. Spongy mesophyll: irregularly shaped cells which create air spaces to allow the gaseous exchange to take place; do not contain many chloroplasts Vascular Bundles: made up of xylem and phloem Xylem: vessel which transports water and dissolved minerals and has lignified walls made of cellulose Phloem: vessel which transports nutrients Stomata: little holes that open and close to allow the gaseous exchange to occur. The stomata are close to CAIE IGCSE BIOLOGY prevent water loss and open to letting gases in and out. When guard cells lose water, the stoma close (at night), while the stoma opens when guard cells gain water & swell (during the day). Nutrients Uses Calcium Development and maintenance of strong bones and teeth Iron Making haemoglobin Fibre (Roughage) Provides bulk for faeces, helps peristalsis Water Chemical reactions, solvent for transport 7.3. Deficiencies Vitamin C: Scurvy; loss of teeth, pale skin & sunken eyes Calcium/Vitamin D: Rickets, Osteoporosis; weak bones and teeth 7.4. Human Alimentary Canal 6.7. Mineral Requirements Nitrate ions Magnesium ions Making amino acids Making chlorophyll Deficiency: small plant due to Deficiency: plant lacks slow/stunted growth chlorophyll, leaves turn yellow You need to know the purpose of these required nutrients . 7. Human Nutrition Balanced Diet: A diet containing proper proportions of carbohydrates, fats, proteins, vitamins, minerals and water to maintain good health and metabolism. Diet-related to age/gender/lifestyle: Children Below 12: Require more calcium Teenagers: Highest calorie intake Adults: Balanced meal with fewer calories Pregnant Women: more iron, calcium Males: Generally, require more energy 7.2. Importance of Dietary Sources Nutrients Uses Carbohydrates Energy Fats and oils Source of energy, building materials, energy store, insulation, buoyancy, making hormones Proteins Energy, building materials, enzymes, haemoglobin, structural material (muscle), hormones, antibodies Vitamin C Collagen, resistance to diseases Vitamin D Absorption of calcium WWW.ZNOTES.ORG Functions of the Organs Ingestion: taking substances (e.g. food, drink) into the body through the mouth. Physical Digestion: breakdown of food into smaller pieces without chemical change. It increases the surface area of food for the action of enzymes in chemical digestion. Chemical Digestion: breakdown of large, insoluble food molecules into small, soluble molecules. Absorption: the movement of nutrients from the intestines into the blood Assimilation: uptake and use of nutrients by cells Egestion: the removal of undigested food from the body as faeces Main Organs in the Alimentary Canal Mouth: contains teeth used for mechanical digestion, an area where food is mixed with salivary amylase & where ingestion takes place Salivary glands: produce saliva, which contains amylase and helps food slide down oesophagus Oesophagus: tube-shaped organ which uses peristalsis (circular muscle contract and relax) to transport food from mouth to stomach Stomach: has pepsin (a protease) to break down proteins into amino acids and kills bacteria with hydrochloric acid. They also have elastic walls. Small intestine: tube-shaped organ composed of two parts the: CAIE IGCSE BIOLOGY Duodenum: fats are emulsified by bile and digested by pancreatic lipase to form fatty acids and glycerol. Pancreatic amylase and trypsin (a protease) break down starch. Ileum: Maltase breaks down maltose to glucose. This is where absorption takes place, adapted by having villi and microvilli. Pancreas: produces amylase, trypsin and lipase. Liver: produces bile (emulsifies fats, neutralises acidic fat molecules), deamination and makes urea to be sent to the kidney. Also, site of the breakdown of alcohol and other toxins. Gall bladder: stores bile from the liver Large intestine: tube-shaped organ composed of two parts: Colon: organ for absorption of minerals and vitamins and reabsorbing water from waste to maintain the body’s water levels Rectum: where faeces are temporarily stored Anus: a ring of muscle which controls when faeces is released. Appendix: is not part of the syllabus, so it doesn’t need to be known. 7.5. Teeth Incisors Canines Premolars Molars Dentine: calcium salts deposited on a framework of collagen fibres Nerves Blood vessels 7.7. Chemical Digestion Where enzymes are used to break down large insoluble substances such as proteins into smaller soluble substances like amino acids so that they can be absorbed. Amylase: breaks down starch into maltose; it is produced in the pancreas (but also in the salivary gland) Maltase: breaks down into glucose in the membrane of the epithelium lining in small intestines. Protease: breaks down proteins into peptides (done by pepsin-acidic) and then into amino acids (done by trypsin). Pepsin comes from the stomach and trypsin from the pancreas (alkali). Lipase: breaks down lipids into fatty acids and glycerol, produced by the pancreas. Hydrochloric acid in gastric juice: Denaturing enzymes in harmful microorganisms Giving the optimum pH for pepsin activity Kills pathogens Bile: an alkaline mixture that neutralises the acidic mixture of food and gastric juices entering the duodenum from the stomach to provide a suitable pH for enzyme action. 7.8. Absorption & Villus Absorption: the movement of nutrients from the intestines into the blood Blunt for Blunt chewing Rectangular chewing and Sharp-pointed and grinding. shape, sharp grinding, one for piercing Two or three for cutting and or two roots, and tearing roots, ridges biting ridges at the at the end end 7.6. Structure of a Tooth Our teeth are embedded in bone and the gums Enamel: the strongest tissue in the body made from calcium salts Cement: helps to anchor tooth Pulp: contains tooth-producing cells, blood vessels, and nerve endings which detect pain. WWW.ZNOTES.ORG The small intestine is the region for absorption of digested food. The small intestine is folded into many villi, increasing the surface area for absorption. One villus will have tiny folds on the cells on its outside called microvilli. More surface area means more absorption of nutrients can happen. Lacteals: absorbs fatty acid and glycerol CAIE IGCSE BIOLOGY Capillaries: provide a better blood supply Most water is absorbed from the small intestine, and some from the colon (large intestine). 8.2. Root Hair Cell The small intestine absorbs 5–10 dm3 per day The colon absorbs 0.3–0.5 dm3 per day 8. Transport in Plants Functions of Xylem transport water and mineral ions, and support Functions of Phloem transport sucrose and amino acids Adaptations of Xylem Function: to absorb water and minerals from the soil They have an elongated shape for a larger surface area, which increases water absorption rate by osmosis and ions by active transport. 8.3. Pathway Taken by Water The large surface area of root hairs is important as it increases the uptake of water and mineral ions. 1. thick walls with lignin 2. no cell contents 3. cells joined end to end with no cross walls to form a long continuous tube Water enters root hair cells from moist soil via osmosis because water potential is higher in soil than in the cytoplasm. Then it enters into the root cortex cells, xylem, and lastly, the mesophyll cells. 8.4. Transpiration Transpiration: loss of water vapour from leaves, and it evaporates from the surface of the mesophyll cells into the WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY air spaces and diffuses out of the leaves through the stomata. Caused by water loss in leaves which lowers their water potential Water moves from the xylem to leaf tissues via osmosis Water moves up the stem in the xylem due to tension (because of the cohesion of water molecules to each other) caused by water loss from the leaves Ends with the gain of water through roots This upwards flow of water is called the transpiration stream 8.6. Factors Affecting Rate of Transpiration \n Water leaves mesophyll cells into air spaces created by an irregular shape of spongy mesophyll cells, then diffuses out of the stomata. Water vapour loss is due to the large internal surface area provided by the interconnecting air spaces between mesophyll cells and the size and number of stomata Water moves upwards in the xylem in terms of a transpiration pull that draws up a column of water molecules held together by forces of attraction between water molecules Wilting occurs if water loss is greater than water uptake – cells become flaccid, tissues become limp, and plants are no longer supported Temperature: Higher temperatures increase the waterholding capacity of air and increase the transpiration rate Humidity: Low humidity increases the water potential gradient between the leaf and the atmosphere hence increasing the transpiration rate Wind speed: Removing water molecules to maintain a steep concentration gradient 8.7. Translocation Translocation: Movement of sucrose and amino acids in the phloem; from regions of production (sources) to regions of storage or regions of utilization in respiration or growth (sinks). Translocation in different seasons: Spring: sucrose transported from stores in roots to leaves Summer & early autumn: sucrose goes from photosynthesizing leaves to root stores, Below is a picture of a girdle in a tree trunk. Investigating Transpiration A potometer is used to measure the rate of water uptake However, it may not be accurate as some water is used for photosynthesis. 8.5. Uptake of Water WWW.ZNOTES.ORG 9. Transport in Animals Circulatory system: a system of tubes (veins, capillaries, arteries) with a pump (heart) and valves (in heart and veins) to ensure a one-way flow of blood. CAIE IGCSE BIOLOGY 9.2. Transport Systems Single circulation system (fish): Blood flows through the heart once every complete circuit Two heart chambers Blood absorbs oxygen in the gills Released in body cells, then back to the heart Right atrium: collect deoxygenated blood & pump it to the right ventricle Right ventricle: pumps deoxygenated blood to lungs Pulmonary artery: carries deoxygenated blood from the right ventricle to the lungs Septum: separates the left and right sides of the heart and keeps deoxygenated and oxygenated blood separate. Pulmonary vein: carry oxygenated blood from the lungs to the left atrium Left atrium: collect oxygenated blood and pump it to the left ventricle Left ventricle: pumps oxygenated blood to the body via the aorta Aorta: carries oxygenated blood from the left ventricle to the rest of the body Atrioventricular and semi-lunar valves: prevent backflow of blood Relative Muscle Wall Thickness: Atria < Right Ventricle < Left Ventricle 9.4. Cardiac Cycle Double circulation system: Four heart chambers Blood passes through the heart twice every complete circuit Oxygenated in the lungs, to the heart, to the body, and back to the heart Advantages: delivers greater blood flow rate to tissues around the body as the heart pumps the rich oxygenated blood to it from the lungs 9.3. The Heart The mammalian heart contains a systemic and pulmonary circuit. Atrial diastole, Cardiac diastole: Atrial systole, ventricular systole: all chambers are ventricular diastole: after the atria relax, relaxed, and atria contract, the ventricles blood flows into pushing blood into contract, forcing the heart the ventricles blood out of the heart Physical activity makes the heart beat faster and more deeply for increased blood circulation so that more oxygen and glucose can reach the muscles. Explain the reasons for changes in pressure seen in arteries (0610/42/F/M/23) caused by contraction of muscles (of the heart/ventricle) pressure increases when the heart / ventricles contract/pump pressure decreases when the heart/ventricles relax 9.5. Exercise on Heart Rate The heart's electrical activity can be monitored by the electrocardiogram (ECG), pulse rate, stethoscope and listening to the sounds of the valves closing. WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY Physical activity makes the heart beat more quickly and deeply for increased blood circulation so that more oxygen and glucose can get to the muscle. Vessel Function Large and wide lumen to reduce resistance to the flow of blood 9.6. Coronary Heart Disease One cell thick wall for easy diffusion The coronary arteries are the heart’s blood supply. The coronary artery becomes blocked, interrupting blood supply to the heart muscle. Part of the heart muscle stops contracting, causing a heart attack Risk factors are diet, lack of exercise, stress, smoking, genetic predisposition, age and sex Can be prevented by not smoking, avoiding fatty food (a good diet) and exercising regularly Structure Capillaries Allow substances to diffuse into cells Highly branched; large surface area Capillary beds constantly supplied with fresh blood, so diffusion occurs Major Blood Vessels Heart: Vena Cava, Aorta, Pulmonary Arteries & Vein Lungs: Pulmonary Arteries & Veins Kidney: Renal Arteries & Veins Liver: Hepatic Artery, Hepatic Veins and Hepatic Portal vein Arterioles and Venules The vessels that connect arteries to capillaries are called arterioles The vessels that connect capillaries to veins are called venules 9.8. Blood Arteries, Veins and Capillaries 9.7. Structural Adaptations of Vessels Vessel Arteries Function Structure Elastic tissue walls stretch and relax as blood is forced out; causes pulse Transport high-pressure blood away from heart Thick walls to withstand high pressure Small lumen maintains (high) blood pressure. Veins Red blood cells: haemoglobin and oxygen transport (oxyhaemoglobin) White blood cells: phagocytosis and antibody production Platelets: allows blood clotting Plasma: transport of blood cells, ions, nutrients, urea, hormones and carbon dioxide (mostly water and dissolved substances) Transport low pressure Valves prevent backflow blood to the heart of blood. Blood is at low pressure, but nearby muscles squeeze veins and help push blood to the heart WWW.ZNOTES.ORG 9.9. White Blood Cells Phagocyte Lymphocyte Phagocyte has lobed/irregular Lymphocytes have a circular C-shaped nucleus and nucleus and are found in vesicles containing digestive blood enzymes. CAIE IGCSE BIOLOGY Phagocyte Lymphocyte Phagocytosis: engulf pathogen, vesicles fuse with the vacuole, enzymes digest bacteria. Large nucleus/small cytoplasm, and they produce antibodies, Antigens: protein/carbohydrate on the Antibodies: Y-shaped proteins surface of the pathogen which bind to label pathogens. provokes the immune system Then either destroyed by being ingested by phagocytes or the antibodies do it. 9.10. Blood Clotting Reduces blood loss and keeps pathogens out Fibrinogen (inactive) turns to fibrin (activated), forms a mesh to trap red blood cells, and eventually dries to form a scab. 10. Diseases and Immunity 10.1. Pathogens Pathogen: a disease-causing organism. Transmissible disease: a disease in which the pathogen can be passed from one host to another. The pathogen for a transmissible disease may be transmitted either: Direct contact e.g. through blood, body fluids Indirect contact e.g. contaminated surfaces/food, from animals, from air 10.2. Body Defences The human body has many natural defences against pathogens. Mechanical barriers: Nostrils contain hairs that help trap dust The skin has a thick outer layer of dead cells Chemical barriers: Sticky mucus which can trap pathogens In the stomach, hydrochloric acid is secreted, which kills many of the bacteria in food Cells: Pathogens that manage to get through all these defences are usually destroyed by white blood cells: Some of these cells take in and digest the pathogens by phagocytosis Others produce antibodies that incapacitate or kill the pathogen Vaccination against disease helps antibodies to produce very quickly 10.3. Ways of Controlling the Spread of Diseases a clean water supply hygienic food preparation good personal hygiene waste disposal sewage treatment 10.4. The Immune System An antibody is a protein molecule which fits into another molecule Pathogen molecules are called antigens. To destroy a pathogen, antibody molecules must be made which are exactly the right shape to fit into molecules (antigens) outside the pathogen. Antibodies lock onto antigens leading to the destruction of pathogens/marking of pathogens for destruction by phagocytes If a pathogen enters the body, it meets many lymphocytes. One of these will recognise the pathogen and divide rapidly by mitosis These lymphocytes then secrete antibodies, destroying the pathogens Active immunity: defence against a pathogen by antibody production in the body. Active immunity is gained after infection by a pathogen or by vaccination. Vaccines immunise children against diseases caused by pathogens Process of vaccination: Harmless pathogen given which has antigens by injection Antigens trigger an immune response by lymphocytes which produce antibodies Memory cells are produced that give long-term immunity Passive immunity - short-term defences against a pathogen by antibodies acquired from another individual. Memory cells are NOT produced in passive immunity Babies get passive immunity by breastfeeding. Breast milk contains antibodies from the mother, which are passed on to her baby. Useful because a young baby’s immune system is not well developed; the mother’s antibodies can protect it against any diseases. Some diseases are caused by the immune system targeting and destroying body cells (Auto-immune disease) 10.5. Cholera WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY Diarrhoea: loss of watery faeces To cure this is to give oral rehydration therapy One of these is infectious by a bacterium, “Vibrio chlorae”, causing cholera. Cholera is a disease caused by a bacterium transmitted in contaminated water. The cholera bacterium produces a toxin that causes the secretion of chloride ions into the small intestine, causing lower osmotic water movement into the gut, causing diarrhoea, dehydration and loss of salts from the blood. 11. Gas Exchange in Humans 11.1. Gas Exchange Surfaces Properties Reasons Thin surface Short distance to diffuse (one cell thick) Large surface area Many molecules can diffuse at once/More alveoli Good ventilation Regular fresh air supplies keep up concentration gradients for oxygen and carbon dioxide. Good blood supply Gases can be carried to/from the cells that need/produce them 11.2. Structure of the Lungs The lung contains a diaphragm, ribs, intercostal muscles, larynx, trachea, bronchi, bronchioles, alveoli and associated capillaries Cartilage (in the trachea): prevents the trachea from collapsing during the absence of air and protects it by keeping it open. Ribs: to protect vital organs and blood vessels and expands and contract (and efficient breathing). Intercostal (internal & external) muscles: situated between the ribs that create and move the chest wall. Diaphragm: produces volume and pressure changes in the thorax leading to the ventilation of the lungs. Composition of Breathing Dry Air WWW.ZNOTES.ORG Inspired Air Expired Air Oxygen 21% 16% Carbon Dioxide 0.04% 4% Nitrogen 78% 78% Water Vapour Lower Higher Test for CO2: Add CO2 through limewater. +ve result = turns cloudy 11.3. Effect of Physical Activity on Breathing Physical activity increases the breathing rate – more respiration - higher CO2 concentration in the blood This is measured with a spirometer to produce a spirogram. During exercise, tissues respire at a higher rate, the change in breathing volume and rate helps to keep CO2 concentration and pH at safe levels. 11.4. Breathing Inspiration Expiration External intercostal muscles contract – pulls ribcage upwards and outwards External intercostal muscles relax – ribcage falls downwards and inwards Diaphragm muscles contract Diaphragm muscles relax – – the diaphragm moves return to a dome shape, and downwards, and the volume the volume of the thorax of the thorax increases decreases Atmospheric Pressure > Pressure in Thorax Atmospheric Pressure < Pressure in Thorax Air moves into the lungs Air moves out of the lungs Internal intercostal muscles: are used in coughing and sneezing. Mucus & cilia: goblet cells produce sticky mucus to trap and eliminate particulate matter and microorganisms. Ciliated cells have cilia: little hairs which sweep/beat back and forward in a coordinated way to brush mucus up the CAIE IGCSE BIOLOGY lungs into the mouth. 12. Respiration Respiration: Chemical reactions that break down nutrient molecules in living cells to release energy. Uses of energy in the body of humans: muscle contraction, protein synthesis, cell division, active transport, growth, the passage of nerve impulses and the maintenance of a constant body temperature. Respiration involves the action of enzymes in cells to speed up the reaction. In the exam, always state that energy is released; it is NEVER made, produced, or created. 12.2. Aerobic Respiration Chemical reactions in cells that use oxygen to break down nutrient molecules to release energy Glucose + oxygen → carbondioxide + water C 6 H12 O6 + 6O2 → 6C O2 + 6H2 O 12.3. Anaerobic Respiration Chemical reactions in cells break down nutrient molecules to release energy without using oxygen. In muscles (vigorous exercise): Aerobic Anaerobic Oxygen Needed Not needed Breakdown of Glucose Complete Incomplete Products Carbon Dioxide and Water Animals: Lactic Acid & Yeast: Carbon Dioxide and Ethanol Amount of Energy Released More Less 13. Excretion in Humans Excretion: the removal from organisms of toxic materials, the waste products of metabolism (chemical reactions in cells including respiration) and substances in excess of requirements. Substances should include carbon dioxide (lungs), urea, excess water and ions (kidney). The importance of excretion is due to the toxicity of the urea. 13.2. Function of Liver The role of the liver is in the assimilation of amino acids by converting them to proteins. Glucose → Lactic Acid In yeast (single-cell fungi): Glucose → Ethanol + C arbon Dioxide C 6 H12 O6 → 2C 2 H5 OH + 2C O2 Disadvantages of anaerobic respiration: Only produces 1/20 of the energy per glucose molecule that aerobic respiration would Produces poisonous lactic acid Lactic acid: Builds up in muscles and blood during vigorous exercise The heart, liver and kidneys need extra oxygen to do this which causes you to continue breathing heavily after exercise. The extra oxygen is called the oxygen debt. Oxygen Debt is removed by: continuation of fast heart rate to transport lactic acid in the blood from the muscles to the liver continuation of deeper and faster breathing to supply oxygen for aerobic respiration of lactic acid aerobic respiration of lactic acid in the liver 12.4. Comparison of Aerobic and Anaerobic Respiration Aerobic WWW.ZNOTES.ORG Anaerobic Deamination is removing the nitrogen-containing part of amino acids to form urea. Urea is formed in the liver from excess amino acids. Alcohol, drugs & hormones are broken down in the liver. 13.3. Function of Kidney Removal of urea and excess water and the re-absorption of glucose and some salts CAIE IGCSE BIOLOGY nephron by active transport. These substances are reabsorbed back into the blood capillary. 3. Loop of Henlé: this part is permeable to water but not salt. Water is drawn out of the filtrate in the nephron by osmosis because of the low water potential of the medulla tissue fluid. 4. Collecting duct: the remaining substances move through the second coiled tubule into the collecting duct, forming urine. The permeability of this part of the nephron to water is controlled. 14. Coordination and Response 14.1. Nervous Control in Humans Cortex: contains Bowman’s capsules and coiled tubules Ureter: carries urine from the kidney to the bladder Medulla: has loops of Henlé and collecting ducts Loop of Henlé: selectively absorbs water/solutes Collecting ducts: reabsorbs water into blood and stores wastes until it is passed into the ureter. Urethra: carrying urine from the bladder to the outside. Bladder: stores urine Renal capsule: filters water, glucose, urea and salts from the blood. Kidney tubule: reabsorbs 100% of glucose; most of the water and some salts back into the blood (red), leading to urea concentration in the urine and loss of excess water and salts into the tubule. Renal artery: brings wastes and water from the blood Renal vein: reabsorbs water and useful molecules and leaves wastes behind The mammalian nervous system consists of two parts: Central nervous system (CNS) consists of the brain and spinal cord, which are the areas of coordination. Peripheral nervous system (PNS) comprises nerves and neurones, which coordinate and regulate body functions. Electrical impulses are travelled through the neurones. The nervous system helps with the coordination and regulation of body functions. 14.2. Types of Neurones Nerve impulse: an electrical signal that passes along the nerve cells called neurones Motor Neurone: 13.4. Structure of the Kidney Sensory Neurone: 1. Ultrafiltration: blood from the renal artery enters the glomerulus. Water, urea, salts and glucose are forced into the Bowman’s capsule. Blood cells and large proteins cannot pass through. 2. Selective reabsorption: in the tubule, two-thirds of the salt and water and all the glucose move out of the WWW.ZNOTES.ORG Relay Neurone: CAIE IGCSE BIOLOGY Synaptic cleft: the small gap between each pair of neurones Inside the neurone’s axon, there are 100s of tiny vacuoles (vesicles, each containing a chemical called neurotransmitter) When an impulse arrives, the vesicles move to the cell membrane and empty their content into the synaptic cleft. The neurotransmitter quickly diffuses across the tiny gap and attaches to receptor molecules in the cell membrane of the relay neurone. This can happen because the neurotransmitter molecules' shape complements the receptor molecule's shape. 14.3. Simple Reflex Arc A reflex action automatically and rapidly integrates and coordinates the stimuli with the responses of effectors (muscles and glands). E.g. quickly removing your hand from the hot metal surface They involve three neurones: a sensory neurone, a relay neurone and a motor neurone. The gap between neurones is called a synapse. How the simple reflex arc works: A stimulus affects a receptor (cell or organ that converts a stimulus into an electrical impulse) A sensory neurone carries impulses from the receptor to the CNS Connector/relay neurone carries impulse slowly (because it has no myelin sheath) across the spinal cord The motor neurone carries impulses from the CNS to the effector The effector (either a muscle or a gland) carries out the response 14.5. The Eye Sense organ: groups of receptor cells responding to specific stimuli: light, sound, touch, temperature and chemicals. Cornea: refracts light Iris: controls how much light enters the pupil Lens: focuses light onto the retina Retina: contains light receptors, some sensitive to light of different colours (Rods and cones) Optic nerves: carries impulses to the brain 14.6. Accommodation Adjusting for near and distant objects. 14.4. Synapses Synapse: a junction between two neurones, consisting of a gap across which impulses pass by diffusion of a neurotransmitter The synapses ensure that impulses travel in one direction only. WWW.ZNOTES.ORG Near Object Distant Object Ciliary muscles contract Ciliary muscles relax Suspensory Ligaments slack Suspensory Ligaments tighten CAIE IGCSE BIOLOGY Near Object Distant Object The lens becomes short and fat The lens becomes long and thin Distribution of Rods and Cones Explain why a person cannot focus on distant objects if the suspensory ligaments become permanently overstretched. (0610/42/F/M/23) 1. ciliary muscles relax 2. suspensory ligaments can no longer become tight 3. the lens is not stretched/remains wide 4. the angle of refraction remains unchanged 14.7. Pupil Reflex 14.9. Hormones Adjusting for high and low light intensity An involuntary response Low Light Intensity High Light Intensity Radial muscles (straight lines) Circular muscles (circular contract and become shorter lines) contract and become to pull the pupil (black dot), shorter to reduce pupil size to making it wider to let more protect the retina from light enter to form a clear bleaching. image on the retina 14.8. Rods and Cones Rods Cones Provide low detail, black & Provide detailed, coloured white images, good for seeing images; they work in high light in low-intensity light (at night). intensity. Packed most tightly around the edge of the retina, so you can see things most clearly when not looking directly at them. Most tightly packed at the retina's center, objects are seen most clearly when directly looking at them. Fovea: Part of the retina where the receptor cells are pushed most closely together Where light is focused when you look straight at an object Hormones: A chemical substance produced by a gland and carried by the blood, altering the activity of one or more specific target organs. Endocrine Glands adrenal glands and adrenaline pancreas and insulin testes and testosterone ovaries and oestrogen 14.10. Adrenaline A hormone secreted by the adrenal gland. It increases pulse rate, heart rate and pupil diameter. Increases blood glucose concentration for respiration. Adrenaline is secreted, for example, bungee jumping or riding a rollercoaster. Gland Hormone Adrenal gland Adrenaline Function Prepares the body for vigorous action Pancreas Insulin Reduces the concentration of glucose in the blood Testes Testosterone Causes the development of male sexual characteristics Ovary Oestrogen Causes the development of female sexual characteristics Pancreas Glucagon Increases concentration of glucose in the blood 14.11. Nervous and Hormonal Systems Comparison Nervous system Endocrine system Speed of action Very rapid Can be slow Electrical impulses Nature of message travelling along nerves WWW.ZNOTES.ORG Chemical messengers (hormones) travelling in the bloodstream CAIE IGCSE BIOLOGY Comparison Nervous system Endocrine system Duration of response Usually within seconds It may take years (puberty) Area of response Example of process controlled blood glucose concentration 14.15. Thermoregulation Localized response Widespread (only one area response (in many usually) organs) Reflexes such as blinking Development of the reproductive system 14.12. Homeostasis Homeostasis: The maintenance of a constant internal environment. Homeostasis is the control of internal conditions within set limits. 14.13. Negative Feedback Feedback controls the production of hormones – the hormones regulate their own production. A negative feedback control is when the change in hormone level acts as a signal to cancel out that change, so when blood hormone level is low, hormone production is stimulated, when it is high, it is inhibited. 14.14. Glucoregulation Blood glucose levels are monitored and controlled by the pancreas The pancreas produces and releases different hormones depending on the blood glucose level Insulin is released when blood glucose levels are high – the liver stores excess glucose as glycogen Glucagon is released when blood glucose levels are low – the liver converts stored glycogen into glucose and releases it into the blood Constant body temperature is maintained by: Insulation: provided by fatty tissue retains heat. Hairs become erect to trap warm air by contracting erector muscles and vice versa. Vasodilatation: when it is hot, arterioles, which supply blood to the skin-surface capillaries, dilate (become wider) to allow more blood near to skin surface to increase heat loss (face redder) Vasoconstriction: when it is cold, arterioles, which supply blood to the skin-surface capillaries, constrict (become smaller) to allow less blood near to skin surface to decrease heat loss Sweating: the water evaporates, giving a cooling effect Skin receptors: sense heat, and sensory neurons send impulses to the hypothalamus Shivering: muscular activity generates heat Thermoregulatory centre: the hypothalamus controls corrective mechanisms (e.g. sweating and shivering). 14.16. Tropic Responses When the control of blood glucose does not work, a person is said to have diabetes Type 1 diabetes is caused by the death of the cells that secrete insulin. Symptoms: hyperglycaemia (feeling unwell, dry mouth, blurred vision, and feel thirsty) or hypoglycaemia (tired, showing confusion and irrational behaviour) Treatment: eating little and often and avoiding large amounts of carbohydrates, injecting insulin to reduce WWW.ZNOTES.ORG Auxin: Plant hormones or growth substances Controls tropisms It is produced by cells at the tip of the roots and shoots of plants Gravitropism: a response in which a plant grows towards (positive) or away (negative) from gravity. Auxins’ role in gravitropism: Made in the shoot tip Then it diffuses through the plant from the shoot tip CAIE IGCSE BIOLOGY Auxin is unequally distributed in response to light and gravity Auxin stimulates cell elongation Phototropism: a response in which a plant grows towards (positive) or away (negative) from the direction light is coming. Auxins’ role in phototropism: If the sun shines on the right side of a plant’s shoot, auxins accumulate on the dark opposite left side. Auxins accumulating makes cells on the left side grow faster than cells on the right. When the left side of the shoot starts growing faster than the right side, the shoot will start to bend to the right side towards sunlight. 15. Drugs Drugs: Any substance taken into the body that modifies or affects chemical reactions in the body. 15.2. Antibiotics Antibiotics work by disrupting the cell wall formation of the bacteria you are trying to get rid of, but not of human cells. Some bacteria are resistant to antibiotics which reduces the effectiveness of antibiotics The development of resistant bacteria such as MRSA can be minimized by limiting antibiotics only when essential and ensuring treatment is completed. Antibiotics don’t work on viruses because they do not have a cell wall and make the host cell perform their tasks. 15.3. Antibiotic-Resistant Bacteria Antibiotic-resistant bacteria can be reproduced through natural selection, where it begins from: The generation time is the time taken for a cell to divide into 2. Advantages Disadvantages Fast: no need to find mate, fertilise etc. No variation/biodiversity Good characteristics are kept Harmful genes transferred Do not need to carry offspring Overcrowding- fighting for food Prone to extinction 16.2. Sexual Reproduction Sexual reproduction: process involving the fusion of the nuclei of two gametes (sex cells) to form a zygote and the production of offspring that are genetically different from each other Fertilisation: the fusion of gamete nuclei Nuclei of gametes are haploid and that the nucleus of a zygote is diploid Diploid - Full Set of Chromosomes Haploid - Half Set of Chromosomes Advantages Disadvantages Produces genetically different Takes lots of time and energy offspring Reduced risk of extinction Mate required Energy on improving appearances or pollen volume for pollination (plants) 16.3. Sexual Reproduction in Plants Insect-pollinated, dicotyledonous flowering plant: foxglove Flowers are the reproductive organ of the plant Mutation - giving rise to variation Antibiotics kill bacteria without changing genes Competition for food space, etc Reproduce via binary fission Then alleles are passed on to offspring to reproduce. 16. Reproduction Wind-pollinated flower structure: grass 16.1. Asexual Reproduction Asexual Reproduction: the process resulting in the production of genetically identical offspring from one parent. Bacteria: Reproduce by binary fission, each bacterium divides into two. 16.4. Functions Sepal: protect the flower bud. WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY Petal: brightly coloured and scented and may have nectarines which are all used to attract insects, petals in wind pollinated flowers are tiny, and used for pushing the bracts (leaf-like structures) apart to expose stamens and stigma Anther: has pollen sacs with pollen grains which contain the male nucleus (male gamete). Stigma: platform on which pollen grains land Ovary: hollow chamber, ovules grow from the walls. 16.5. Pollination Pollination: transfer of pollen grains from the male part of the plant (anther of stamen) to the female part of the plant (stigma). Agents of pollination: insects, birds, mammals, water and wind Insect Pollinated Wind Pollinated Bright, colourful petals – attract Dull petals Sweetly scented No scent Contains nectar No nectaries A moderate amount of pollen Huge amount of pollen Pollen is spiky/sticky Pollen round and smooth Another & stigma inside the flower Anther & stigma hangs out Sticky stigma Feathery stigma Pollen tube: pollen grain lands on stigma and creates a tunnel down the style, through the micropyle, to the ovules. Ovule - seed Ovary - fruit Self-Pollination the transfer of pollen grains from the anther of a flower to the stigma of the same flower or a different flower on the same plant. Advantages Disadvantages Genetically identical Lack of genetic variation High chance of successful pollination Increases competition between plants Fast and saves time Susceptible to the same disease Cross-Pollination the transfer of pollen grains from the anther of a flower to the stigma of a flower on a different plant of the same species. Advantages Disadvantages Increases variation Reliance on pollinators Quick to adapt to surroundings Wastage of pollen WWW.ZNOTES.ORG Advantages Disadvantages Less susceptible to diseases More energy required 16.6. Germination A process controlled by enzymes Water: activates enzymes to turn insoluble food stores into soluble substances, and makes tissues swell so that the testa splits Oxygen: enters through the gaps in the testa (along with water), and is used in aerobic respiration. Temperature: must be suitable for enzymes to work (at optimum temperature). 16.7. Sexual Reproduction In Humans Male reproductive system: Testes: have many coiled tubes which produce sperm, and the cells between tubes produce testosterone. Scrotum: holds testicles Sperm duct: carries sperm from testicles to urethra. Prostate gland: makes seminal fluid Urethra: carries semen from the sperm duct to the tip of the penis Penis: male sex organ used to transfer semen to the female. Female reproductive system: CAIE IGCSE BIOLOGY 4. Released once per month containing 23 chromosomes Features Functions Energy storage Development of zygote Jelly coat Changes at fertilisation 16.9. Menstrual Cycle Ovary: contains follicles that develop into the ova and produces progesterone and oestrogen Oviduct (fallopian tube): carries the ovum to the uterus Uterus (womb): where the fetus develops. Cervix: neck of the uterus: a strong rigid muscle, moist by mucus with a small opening Vagina: receives the penis during intercourse and way out for baby at birth. Moist tube of muscle, flexible and secretes mucus 16.8. Adaptive Features of Gametes Sperm (Male Gamete) 1. Small in size 2. Elongated and streamlined with energy storage 3. Millions in numbers containing 23 chromosomes Features Functions Flagellum Propels the sperm to swim Mitochondria Respiration to release energy for swimming Enzymes in the acrosome Release digestive enzymes to digest the jelly coat Egg Cell (Female Gamete) 1. Larger in size 2. Spherical, protein/fat in the cytoplasm 3. Moved with the help of Cillia WWW.ZNOTES.ORG Day 1 to 5: In the ovary, FSH secreted by the Pituitary Gland to stimulate the maturation of ONE follicle in the ovary. In the uterus: the endometrium breaks down; menstruation Day 5 to 12: In the ovary, the follicle keeps maturing In the uterus, oestrogen is secreted by follicle and the ovarian tissues to prepare the endometrium Day 13/14/15: In the ovary, LH is also secreted by the Pituitary Gland to trigger the release of the egg from the follicle into the fallopian tube. Ovulation happens on Day 14. Day 15 to 28: CAIE IGCSE BIOLOGY In the ovary, LH triggers the formation of Corpus Luteum In the uterus: progesterone is secreted by Corpus Luteum to keep endometrium thick, waiting for possible embryo implants. Day 28 – Scenario 1: Egg not fertilised No implantation takes place, the Corpus Luteum degenerates, causing a lack of progesterone. This means that endometrium is no longer thick, back to Day 1 Day 28 – Scenario 2: The egg is fertilised Implantation occurs. This makes the hormones keep the Corpus Luteum maintained which means that progesterone is high. This keeps the Endometrium thick for pregnancy The fusion of the nuclei from a male gamete (sperm) and a female gamete (egg cell). Development of zygote: One sperm penetrates The ovum membrane alters to form a barrier against sperm The head of the sperm (male nucleus) approaches and then fuses with the nucleus of the ovum. Zygote divides over and over to make a ball of cells called an embryo. It implants itself in the nucleus's (implantation) wall, followed by conception. Development of fetus: zygote is changed through growth (mitosis) and development (organization of cells into tissues and organs) Umbilical cord: contains the umbilical artery, which carries deoxygenated blood and waste products from the fetus to the placenta and the umbilical vein, which carries oxygenated blood and soluble food from the placenta to the fetus. (Contains fetus’ blood) Placenta: organ for exchange of soluble materials such as foods, wastes and oxygen between mother and fetus; physical attachment between uterus and fetus. (Contains mother’s blood) Amniotic sac: membrane which encloses amniotic fluid, broken at birth. Amniotic fluid: protects the fetus against mechanical shock, drying out and temperature fluctuations Some pathogens and toxins can pass across the placenta and affect the fetus. 16.12. Sex Hormones 16.10. Hormones in Menstrual Cycle Oestrogen is secreted by the ovaries. It stops FSH from being produced - so that only one egg matures in a cycle, and it stimulates the pituitary gland to release the hormone LH. Progesterone is a hormone secreted by ovaries. It maintains the lining of the uterus during the middle part of the menstrual cycle and pregnancy. Follicle-stimulating hormone (FSH) is secreted by the pituitary gland. It causes an egg to mature in an ovary and stimulates ovaries to release the hormone oestrogen. Luteinizing hormone (LH): is also secreted by the pituitary gland and causes mature eggs to be released from the ovary. 16.11. Fertilisation WWW.ZNOTES.ORG Primary sexual characteristics: present during development in the uterus and are the differences in reproductive organs etc, between males and females Secondary sexual characteristics: are the changes that occur during puberty as children become adolescents At puberty, the pituitary gland starts to stimulate the primary sex organs; the testes in males and the ovaries in females. Sex hormones – testosterone in males and oestrogen in females are released into the bloodstream. They only affect the target organs, which have receptors which can recognize them. Causes secondary sexual characteristics such as the growth of pubic hair and maturation of sexual organs. 16.13. Sexually Transmitted Infections Human Immunodeficiency virus (HIV) is one example of a sexually transmitted infection. Transmission: Intercourse, blood transfusion, organ transplant or sharing a needle with an infected person Prevention: Avoid intercourse with many partners Use a condom CAIE IGCSE BIOLOGY Don’t come in contact with other people’s blood How it affects the immune system: Infects and destroys lymphocytes Decreases the efficiency of the immune system The body becomes liable to infection by other pathogens This may leads to AIDS and dies from infection 17. Inheritance Inheritance: The transmission of genetic information from generation to generation. 17.2. Chromosomes, Genes and Proteins Chromosomes: made of DNA, which contains genetic information in the form of genes Gene: a length of DNA that codes for a protein Allele: an alternative form of a gene Inheritance of sex in humans is used with X and Y chromosomes. Haploid nucleus: a nucleus containing a single set of unpaired chromosomes (e.g. sperm and egg) Diploid nucleus: a nucleus containing two sets of chromosomes (e.g. in body cells) The sequence of bases in a gene determines the sequence of amino acids used to make a specific protein. Different sequences of amino acids give different shapes to protein molecules. 17.3. DNA & Protein Synthesis DNA: controls cell function by controlling the production of proteins, including enzymes, membrane carriers and receptors for neurotransmitters DNA has 2 long strands and 4 nucleotides, AT and CG Protein synthesis has two stages: Transcription (rewriting the base code of DNA into bases of RNA) Translation (using RNA base sequence to build amino acids into a sequence in a protein) How proteins are made: the gene coding for the protein remains in the nucleus messenger RNA (mRNA) is a copy of a gene mRNA molecules are made in the nucleus and move to the cytoplasm the mRNA passes through ribosomes the ribosome assembles amino acids into protein molecules the specific order of amino acids is determined by the sequence of bases in the mRNA All body cells in an organism contain the same genes, but many genes in a particular cell are not expressed because the cell only makes the specific proteins it needs 17.4. Mitosis WWW.ZNOTES.ORG The nuclear division giving rise to genetically identical cells Mitosis is needed for: Growth: in animals each tissue provides its own new cells when they are needed. Repair of damaged tissues: for example, when you cut your skin, mitosis provides new cells to cover up cut. Replacement of worn out cells Asexual reproduction: in plants Exact replication of chromosomes occurs before mitosis During mitosis, the copies of chromosomes separate, maintaining the chromosome number in each daughter cell Stem cells: unspecialized cells that divide by mitosis to produce daughter cells that can become specialized for specific functions 17.5. Meiosis Reduction division in which the chromosome number is halved from diploid to haploid Meiosis is involved in the production of gametes Meiosis results in genetic variation, so the cells produced are not all genetically identical. 17.6. Monohybrid Inheritance Genotype: the genetic makeup of an organism in terms of the alleles present (e.g. Tt or GG) Phenotype: the observable features of an organism (e.g. tall plant or green seed) genotype + environment + random variation → phenotype Homozygous: having two identical alleles of a particular gene (e.g. TT or gg). Two identical homozygous individuals that breed together will be pure-breeding Heterozygous: having two different alleles of a particular gene (e.g. Tt or Gg), not pure-breeding Dominant: an allele that is expressed if it is present (e.g. T or G) Recessive: an allele that is only expressed when there is no dominant allele of the gene present (e.g. t or g) Pedigree diagrams: CAIE IGCSE BIOLOGY IA and IB are co-dominant giving blood group AB or IAIB, and both dominant to IO. Sex-linked characteristic: a characteristic in which the gene responsible is located on a sex chromosome, and this makes it more common in one sex than in the other Red-green colour blindness is an example of sex linkage. 18. Variation & Selection 18.1. Variation Genetic diagrams: 1:1 Monohybrid Crosses Variation: differences between individuals of the same species Phenotypic variation is caused by both genetic and environmental factors Continuous variation results in a range of phenotypes between two extremes; examples include body length and body mass Discontinuous variation results in a limited number of phenotypes with no intermediates (e.g. you are either blood group O, A, B or AB, nothing else) Discontinuous variation is usually caused by genes only, and continuous variation is caused by both genes and the environment. 3:1 Monohybrid Crosses 18.2. Genetic Mutation Mutation is a genetic change. Gene mutation: a change in the base sequence of DNA Mutation is the way in which new alleles are formed Mutation, meiosis, random mating and random fertilisation are sources of genetic variation in populations Ionising radiation and some chemicals increase the rate of mutation Co-dominance: when both alleles in heterozygous organisms contribute to the phenotype There are three alleles for the blood group given by the symbols IA, IB and IO. WWW.ZNOTES.ORG CAIE IGCSE BIOLOGY Variation leads to survival of the fittest since the variations in certain organisms give that organism an advantage over the others in its species in that area. The development of strains of antibiotic-resistant bacteria is an example of natural selection. The surviving organisms reproduce since they don’t get eaten up, so variation has caused the species to evolve. Adaptation is the process of natural selection by which populations become more suited to their environment over many generations. 18.5. Artificial Selection Mutation is a source of variation e.g. in Down’s syndrome, where a parent’s chromosomes are unevenly distributed in meiosis. In fertilisation, a zygote with a number of chromosomes that is not 46 is created (e.g. 23 + 24). Characteristics: broad forehead, short neck, downwardsloping eyes, short nose and mental retardation. 18.3. Adaptive Features Adaptive feature: an inherited feature that helps an organism to survive and reproduce in its environment Xerophytes: live in deserts where water is scarce, and evaporation is rapid or in windy habitats. Their features are: Deep roots reach the water far underground Leaves reduced spines with minimum surface area for transpiration Shallow spreading roots to collect occasional rain Rolled leaves, leaf hairs and stomata sunk in pits to trap moist air Waxy leaf cuticle, impermeable water Stomata open at night and closed at midday when evaporation is highest E.g. cactus and marram grass Hydrophytes: live wholly or partly submerged in water. Their features are: Leaves are highly divided to create a large surface area for absorption and photosynthesis Very little cuticle formation Lack of xylem tubes, no stomata underside of leaves Stomata are on the upper surface and have a thick waxy layer to repel water and to keep the stomata open and clear Roots are often reduced, and root hairs are often absent 18.4. Natural Selection The greater chance of passing on genes by the bestadapted organisms. Variation is natural or random changes in all living organisms. WWW.ZNOTES.ORG It is breeding organisms with valued characteristics together to try to produce offspring which share those useful characteristics (selective breeding). It can be used to produce organisms that are more economically valued For example, cows that produce more milk, wheat that is easier to separate from grain, dogs which have a better appearance Selective breeding: Selecting by humans of individuals with desirable features Crossing three individuals to produce the next generation Selection of offspring showing the desirable features Selective breeding by artificial selection is carried out over many generations to improve crop plants and domesticated animals. 19. Organisms and their Environment 19.1. Food Chains and Food Webs The sun is the principal source of energy input to biological systems. Energy flow is NOT a cycle; it starts from the sun, and then that energy is harnessed by plants which are eaten by animals which other animals eat. At each step, energy is lost to the environment. Food chain: a chart showing the flow of energy (food) from one organism to the next beginning with a producer, for example: Mahogany tree → caterpillar → song bird → hawk Food web: showing a network of interconnected food chains. Energy is transferred between organisms in a food chain by ingestion Producer: an organism that makes its organic nutrients, usually using energy from sunlight through photosynthesis CAIE IGCSE BIOLOGY Consumer: an organism that gets its energy by feeding on other organisms. Consumers may be classed as primary, secondary, tertiary and quaternary according to their position in a food chain Herbivore: an animal that gets its energy by eating plants Carnivore: an animal that gets its energy by eating other animals Decomposer: an organism that gets its energy from dead or waste organic matter (i.e. a saprotroph) Trophic level: the position of an organism in a food chain, food web or ecological pyramid. Primary consumer: eat vegetables Secondary consumer: eat meat/drink milk Tertiary consumer: eat a predatory fish, salmon Food chains usually have fewer than five trophic levels because energy transfer is inefficient: Sun produces light, and less than 1% of the energy falls onto leaves. Producers ‘fix’ only about 5-8% of that energy because of: transmission, reflection and incorrect wavelength. Primary consumers only get between 5-10% because some parts are indigestible (e.g., cellulose) and do not eat the whole plant. Secondary consumer gets between 10-20% because the animal matter is more digestible & has a higher energy value. At each level, heat is lost by respiration. Humans eating plants is more efficient than humans eating animals because: We need only a couple of vegetables to have one meal, but to have the meat; we must feed the animal a lot of plant material to get far less meat. When raising an animal, plants lose energy in the environment. Then the animal loses energy to the environment and does not use up all the plant material, so it is inefficient. Pyramid of Numbers Pyramid of Biomass Carbon is taken from the atmosphere by photosynthesis (plants) It is passed on to animals and decomposers by feeding. It is returned by respiration; in plants, in animals and being decomposed by microorganisms. (Fossilisation is NOT needed anymore - 2023-2025 syllabus) 19.3. Nitrogen Cycle Nitrogen-fixing bacteria provide usable nitrogen for plants, these may exist in the root nodules where they live in symbiosis with the plants (nitrogen fixation), or this can happen because of lightning, or microorganisms provide them through decomposition. Nitrifying bacteria convert nitrogen-containing substances into better nitrogen-containing substances for the plants (nitrification). Plants absorb these substances and convert them into proteins Death and decay happen at each trophic level leading to stage one Denitrifying bacteria carry out denitrification: they convert nitrogen-containing substances into atmospheric nitrogen 19.4. Population Shows the number of each organism in a food chain Pyramid, which shows the biomass When moving up the pyramid, (number of individuals × their the number of individuals individual mass) decreases The pyramids of biomass are ALWAYS pyramid-shaped. 19.2. Carbon Cycle WWW.ZNOTES.ORG Population: a group of organisms of one species living in the same area at the same time. Community: all of the populations of different species in an ecosystem. Ecosystem: a unit containing the community of organisms and their environment interacting together. 19.5. Factors Affecting the Rate of Population Growth CAIE IGCSE BIOLOGY Food supply: quantity and quality; snails need calcium to reproduce to make a shell. Predation: if the predator population falls, the prey population will rise. Disease: causes organisms to die, so a high death rate partly cancels out the birth rate meaning less population growth, especially if the organism dies before giving birth, or even population decline. 19.6. Sigmoid Population Growth Curve 20.1. Food Supply Humans have increased food production because: Agricultural machinery to use larger areas of land and improve efficiency Chemical fertilisers help crops grow better Insecticides: a type of pesticide that kills insects Herbicides: a type of pesticide that kills weeds Selective breeding to improve production by crop plants and livestock Large-scale Monoculture: the continuous production of one type of genetically identical crop. Lag phase: number of mature, reproducing individuals is low and they may be widely dispersed Exponential (Log) phase: exponential growth occurs, the conditions are ideal and the maximum growth rate is reached. Limiting factors do not limit growth much. Stationary phase: limiting factors slow growth as the population has reached the “carrying capacity” of its environment; when mortality rate = birth rate, the curve levels off and fluctuates around this maximum population size. Death phase: death rate > birth rate due to lack of food, competition, etc. 19.7. Human Population Growth Factors favouring growth Factors controlling growth Lower infant mortality Disease Higher life expectancy famine Better nutrition War Better housing Better sanitation Medicine Vaccination The human population is becoming stable (stagnation) due to: better education (particularly for women), so they work instead of getting married and having children better living conditions, fewer people die, fewer births needed cities, reduced need for physical labour on farms family planning But overall, the population is still increasing. 20. Human Influences on Ecosystems WWW.ZNOTES.ORG Negative Impacts of Large-scale Monoculture If a natural disaster occurs, the whole crop could be wiped out. If pests & diseases attack crops, they could harm them easily Using large fields and pesticides reduces the variety of species. This hinders biodiversity. When insecticides are used persistently, the pests may eventually become resistant to them, reducing their effectiveness Negative Impacts of Intensive Livestock Production Welfare issues for the livestock Diseases can spread easily among them Waste can pollute land and waterways nearby 20.2. Habitat Destruction Biodiversity: the number of different species that live in an area. Reason for habitat destruction Increased area for food crop growth, livestock production and housing Extraction of natural resources Freshwater and Marine pollution By altering food webs, and food chains, humans can have a negative impact on habitats. Effects of deforestation Reduced biodiversity/destroys habitats/extinction Loss of CO2 fixation, thus increase in CO2, thus global warming Soil erosion: tree roots cannot retain soil and go into rivers making the water dirty & cause blockages, and the soil becomes less fertile Flooding: 75% of water is usually absorbed by foliage, root systems or evaporates. After deforestation, water accumulates in valleys. 20.3. Pollution Pollution due to pesticides: CAIE IGCSE BIOLOGY Insecticides (kill insects): meant to kill insects which eat crops, but can kill other, useful insects such as bees which are pollinators, or by bioaccumulation (the increase in dose of toxin from one level of the food chain to the next) Herbicides (kill weeds): can be harmful to animals which eat the plants Non-biodegradable plastics: Choke birds, fish and other animals Fill up the animals’ stomachs so that they can’t eat food Collect in rivers, and get in the way of fish Global Warming: Increase in average temperature of the Earth Methane from burping of cows Started at the same time as humans began burning fossil fuels Scientists believe fossil fuels are causing this – not proven yet Increase in carbon dioxide and methane concentrations in the atmosphere cause an enhanced greenhouse effect the leads to climate change Eutrophication: when water plants receive too many nutrients. Fertilisers put in soil by farmers Fertilisers with nitrates / detergents with phosphates leach into rivers and lakes after rain Water plants grow more than usual They block sunlight and kill plants underneath They die and sink to bottom Bacteria/fungi decompose remains using the O2 and decreasing the O2 concentration Fish and other creatures die from oxygen starvation 20.4. Conservation Sustainable resource: one which is produced as rapidly as it is removed from the environment so that it does not run out Some resources can be conserved and managed sustainably, limited to forests and fish stocks. 1. Forests can be conserved using: education, protected areas, quotas and replanting. 2. Fish stocks can be conserved using: education, closed seasons, protected areas, controlled net types and mesh size, quotas and monitoring. WWW.ZNOTES.ORG Natural resources: Water: used to grow food, keep it clean, provide power, control fires, and drink. We get water constantly through rainfall but we are using up the planet’s fresh water faster than it can be replenished. Fossil fuels: need to be conserved as they will soon run out, they should be therefore replaced with green forms of energy. Recycling: Water: water from sewage can be returned to the environment for human use by sanitation and sewage treatment Paper: sent to special centres where it is pulped to make raw materials for industry Plastic: fossil fuels, bottles → fleece clothing Metal: mining takes a lot of energy, so recycling saves energy Species and habitats: need to be conserved because: Organisms have value in themselves (ethical value) Value to medicine (new molecules from exotic plants = new drugs) Genetic resources are useful to humans as well and are lost when species disappear (DNA for genetic engineering) Each species has its role in its ecosystem; if it is removed, then the whole ecosystem could collapse The use of artificial insemination (AI) and in vitro fertilisation (IVF) in captive breeding programmes Endangered species: How they become endangered: climate change, habitat destruction, hunting, pollution and introduced species If the population size drops, variation decreases Endangered species can be conserved by: monitoring and protecting species and habitats, education, captive breeding programmes and seed banks Reasons for conservation programmes include: reducing extinction protecting vulnerable environments maintaining ecosystem functions by nutrient cycling and resource provision, e.g. food, drugs, fuel and genes increase biodiversity 21. Biotechnology & Genetic Modification Bacteria are useful in biotechnology and genetic engineering due to their rapid reproduction rate and their CAIE IGCSE BIOLOGY ability to make complex molecules Lipases: break down stains containing fats and oil Amylases: break down carbohydrate-based stains, such as starch Cellulases: break down cellulose fibres Lactase: The enzyme that breaks down lactose (the sugar found in milk); people can stop making lactase naturally, therefore, can’t digest lactose. \n Why are bacteria useful in biotechnology and genetic modification? 1. few ethical concerns over their manipulation and growth 2. the presence of plasmids 21.2. Biofuel Use plants to make sugars which yeast then breaks down to make ethanol. This process also uses anaerobic respiration. Bread Making Flour, sugar, water and salt are mixed with yeast to make the dough. Amylase breaks down some starch to make maltose and glucose. This is used by yeast in respiration. The dough is kept warm, moist (28°C). Yeast ferments sugar making carbon dioxide which creates bubbles, so bread rises. Cooking (at 180°C) – kills yeast, evaporates alcohol and hardens the outer surface. 21.3. Uses of Enzymes Lactose-free milk production Lactase made from yeast Lactase bound to the surface of alginate beads Milk passed down beads Lactose is broken down into glucose and galactose Immobilized enzymes are reused 21.4. Making Penicillin Pectinase: Fruit juices are extracted using pectinase (breaks down pectin) Pectin helps plant walls stick together If pectin is broke down, it’s easier to squeeze juice from the fruit Extraction of juice from fruit, making juice clear, not cloudy Biological Washing powders: Biological washing powders and liquids contain enzymes that help remove the stain The enzymes are coated with a special wax that melts in the wash releasing the enzyme Once the stains have been broken down, they are easier for detergents to remove Proteases: break down proteins in stains, e.g., grass, blood WWW.ZNOTES.ORG Penicillin: an antibiotic produced by a fungus called Penicillium. They require proper temperature, pH, oxygen, nutrient supply and waste products. The stainless steel fermentation vessel contains medium containing sugars and ammonium salts. Penicillium is added to produce penicillin. They use sugar for respiration and ammonium salts to make protein and nucleic acids CAIE IGCSE BIOLOGY The fermentation vessel consists of ‘PAWS’ Probes monitor temperature and pH Air provides oxygen for aerobic respiration in fungus A water-cooled jacket removes heat to maintain a temperature of 24°C. Stirrer keeps the microorganism suspended (allowing access to nutrients and oxygen) while maintaining an even temperature. Filtered to remove fungus and then can be crystallized to make capsules. 21.5. Genetic Modification Genetic Modification: changing the genetic material of an organism by removing, changing or inserting individual genes Examples of genetic modification: the insertion of human genes into bacteria to produce human insulin the insertion of genes into crop plants to confer resistance to herbicides the insertion of genes into crop plants to confer resistance to insect pests the insertion of genes into crop plants to provide additional vitamins Human Insulin in Bacteria WWW.ZNOTES.ORG Isolation of the DNA making up a human gene using restriction enzymes, forming sticky ends Cutting of bacterial plasmid DNA with the same restriction enzymes, forming complementary sticky ends. Insertion of human DNA into bacterial plasmid DNA using DNA ligase to form a recombinant plasmid – insertion of the plasmid into bacteria. Replication of bacteria containing recombinant plasmids, which make human protein as they express the gene 21.6. Genetically Modified Crops Advantages Disadvantages Uniform in shape – easy to transport/appeal to consumers Natural species may die Growing season shorter Decrease biodiversity/genetic diversity Led to the development of Drought resistant – less water superweeds – stronger than GM Higher yields No one knows the long-term effects on humans Solve global hunger Expensive seeds CAIE IGCSE Biology Copyright 2023 by ZNotes These notes have been created by Zhan Xuan Chong for the 2023-2025 syllabus This website and its content is copyright of ZNotes Foundation - © ZNotes Foundation 2023. All rights reserved. The document contains images and excerpts of text from educational resources available on the internet and printed books. If you are the owner of such media, test or visual, utilized in this document and do not accept its usage then we urge you to contact us and we would immediately replace said media. 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