Name: _______________________________________________ Date: ________________________________ What is epigenetics? - Carlos Guerrero-Bosagna https://ed.ted.com/lessons/how-the-choices-you-make-can-affect-your-genescarlos-guerrero-bosagna The Game of Life: Epigenetics is the study of how chemical markers can modify the expression of your genetic code. Two examples of genetic markers are methyl groups and acetyl groups. Epigenetics starts early in life. It is the mechanism by which embryonic stem cells differentiate. All cells in your body have an identical DNA codebut their epigenetic markers are what give specialized cells access to key genes, while silencing others that will not be used by that cell type. We now know that epigenetic changes occur throughout our entire lifetime, and the accumulation of epigenetic markers and changes in gene expression can dictate the course of disease development. It is important to note that your genetic sequence does not change, but the ability to access/express certain genes can be changed. Methyl and acetyl groups work by attaching to chromatin (loose DNA) and/or histone proteins (the proteins which DNA wraps around to form chromosomes). Methyl groups tighten the DNA around the histones. This may prevent a cell from having “access” to a gene, and therefore would stop the cell from being able to express the gene and make a protein product. Acetyl chemical markers loosen DNA from histone proteins. This gives cellular machinery access to genes, from which the information can be used to synthesize a protein. It’s important to note that methylation (adding methyl groups) vs. acetylation (adding acetyl groups) does not mean “good” or “bad.” It all depends on which gene is being affected and how it is being affected. Certain genes, we do not want to express in high levels, like genes that control stress hormones or prompt fat storage. Certain genes, we do want to express in high levels, like the ones that code for important digestive enzymes. Although we are just beginning to understand epigenetics, some scientists have evidence that epigenetic tags can be passed on from one generation to the next. The decisions that you make today could affect the health of your family for many generations. Answer the following questions to showing your understanding of epigenetic markers. 1. What type of epigenetic marker is shown in this picture? 2. How is the marker affecting the relationship between the DNA and the histone? 3. What affect does this have on gene expression? 4. What type of epigenetic marker is shown in this picture? 5. How is the marker affecting the relationship between the DNA and the histone? 6. What affect does this have on gene expression? Let’s consider that the entire class is looking at the genetic code of a single person. Your lifestyle choices and the environment that you live in determine epigenetic changes to your genome. While we’re all hypothetically starting out as the “same person” here, let’s see the effect of various choices that a person could make throughout their life. At the end, compare and contrast your epigenetic code. Are there similarities? Differences? Can you think of life choices that correlate with these similarities and differences? Chromosome Chemical modifications to your epigenome 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Rate your lifestyle as excellent, good, poor, or very poor. Diet/nutrition: Rating: ______________________ Explanation: Activity/Exercise: Rating: ______________________ Explanation: Mental/Social/Emotional: Rating: ______________________ Explanation: Take turns with your partner. Roll the dice for each category (à). For each life event, modify your genetic code by adding methyl or acetyl groups to the stated chromosome. Some life choices add multiple chemical markers. For example, (3A-4) tell you that this life event will add 3 acetyl groups to chromosome 4, loosening the DNA and allowing certain genes in your genetic code to be expressed. (M-22) tells you that this life event adds 1 methyl group to chromosome 22, which would make certain genes on that chromosome inaccessible for gene expression. Dice # 1 Eats leafy green ROLL vegetables once à a week (M-16) 2 3 4 5 6 Takes a multivitamin every day (A22) Grows up in Montana (A- 3) Eats processed food and snacks every day (M-8) Eats fast food once a week (A-16) Diet lacks iron and calcium (M-22) High sodium diet (A-16) Grows up in NYC (M- 4) Grows up in Texas (M- 3) Grows up in Chicago (M- 4) Grows up in Maine (A- 3) Free time is devoted to video games alone (A- 4) Just does homework after school (A- 11) Never drinks or smokes (A- 19) Never drinks or smokes (A-19) Involved with clubs and teams ROLL (A- 13) à Doesn’t have many friends, feels lonely (2M- 13) Sleeps 8 hours a ROLL night (M- 5) à Hates job; ROLL miserable going à to work (3A- 11) Has an occasional glass ROLL of wine with à dinner (A- 18) Hasn’t been active since ROLL high school à (2A- 4) Sleeps 5-6 hours a night (3A- 4) Hates job; financially stressed (3A- 11) Does not drink (2A- 18) Busy with school work, hangs out with friends on the weekend (A- 13) Sleeps 8 hours a night (M- 5) Plays basketball after school with friends (M- 21) Develops addiction at young age (4M17) Has a big family and spends lots of time with cousins, etc. (M- 13) Sleeps 8 hours a night (M- 5) Goes hard in gym class every day (M- 21) Never drinks or ROLL smokes à (A- 19) Lays on bed after school and stares at phone (A- 4) Starts vaping in high school (3M- 17) Used to have friends, but they all changed. Now you have none (2M- 13) Sleeps 5-6 hours a night (3A- 4) Social in school, likes school, feels happy at school (3A- 13) Sleeps 5-6 hours a night (3A- 4) High income; you’re the boss (2M- 10) Works 70+ hours a week (A-11) Has a few beers or glasses of wine after work every day (2M- 8) Joins a gym but never goes (A- 4) Works all week; drinks all weekend (2M- 8) Job is chill, but you wish you made more money (M-10) Goes out for happy hour every now and then (M- 6) Can’t stand coworkers; job is stressful (3A-11) Does not drink (2A- 18) Takes gym classes once or twice a week (M- 21) Walks to work (M- 21) 1 hour of exercise 5x per week (3M- 21) High school ROLL education only à (A-5) Ph.D Graduated college Graduated college College + Master’s degree Graduated college Grows up in ROLL Florida (M- 3) à Plays on soccer team ROLL (2M- 21) à Jogs (M- 21) (2A-5) Tried alcohol once in high school (M- 17) Analysis: Epigenetics and The Game of Life How did your final epigenome compare to your partner? Remember, you represent the same person that lived a different life. Compare and contrast. Are there similarities? Differences? Can you think of life choices that correlate with these similarities and differences? ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ Why is knowledge about epigenetics important? Use what you’ve learned from this activity and the videos we’ve watched to explain your answer. ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ Explain how epigenetics influences gene expression. Discuss both methyl chemical markers and acetyl chemical markers. ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ Explain what epigenetics has to do with the development of an embryo. ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ Explain what gene expression means (be sure to give a detailed definition). ___________________________________________________________________________________________ ___________________________________________________________________________________________ ___________________________________________________________________________________________ Explain why you would expect gene expression in a neuron to be different than gene expression in a muscle cell. ___________________________________________________________________________________________ ___________________________________________________________________________________________