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Filling environmental data gaps with QSPR for ionic liquids Modeling n-octanol-water coefficient

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Journal of Hazardous Materials 303 (2016) 137–144
Contents lists available at ScienceDirect
Journal of Hazardous Materials
journal homepage: www.elsevier.com/locate/jhazmat
Filling environmental data gaps with QSPR for ionic liquids: Modeling
n-octanol/water coefficient
Anna Rybinska, Anita Sosnowska, Monika Grzonkowska, Maciej Barycki, Tomasz Puzyn ∗
Laboratory of Environmental Chemometrics, Faculty of Chemistry, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland
h i g h l i g h t s
g r a p h i c a l
a b s t r a c t
• We developed a QSPR model to predict the values of log KOW for ionic
liquids.
• Effect of the cation and anion structures on the modeled property was
determinated.
• Increase in the length of alkyl chain
in cation causes significant increase
of the log KOW .
• Majority of ILs could be transported
with the water mass.
a r t i c l e
i n f o
Article history:
Received 21 June 2015
Received in revised form
22 September 2015
Accepted 12 October 2015
Available online 23 October 2015
Keywords:
Ionic liquids
ILs
QSPR
KOW
Octanol–water partition coefficient
a b s t r a c t
Ionic liquids (ILs) form a wide group of compounds characterized by specific properties that allow using
ILs in different fields of science and industry. Regarding that the growing production and use of ionic
liquids increase probability of their emission to the environment, it is important to estimate the ability of
these compounds to spread in the environment. One of the most important parameters that allow evaluating environmental mobility of compound is n-octanol/water partition coefficient (KOW ). Experimental
measuring of the KOW values for a large number of compounds could be time consuming and costly.
Instead, computational predictions are nowadays being used more often. The paper presents new Quantitative Structure–Property Relationship (QSPR) model that allows predicting the logarithmic values of
KOW for 335 ILs, for which the experimentally measured values had been unavailable. We also estimated
bioaccumulation potential and point out which group of ILs could have negative impact on environment.
© 2015 Elsevier B.V. All rights reserved.
1. Introduction
Design of sustainable ‘green’ products is nowadays one of the
most important challenges for chemical industry. New chemical
materials should be not only useful and inexpensive, but also safe
for human health and the environment. Ionic Liquids (ILs) – salts
consisting of a large organic cation and a small inorganic anion,
having their melting point lower than 100 ◦ C – have being considered as ‘green chemicals’ for last few years. This is because ILs are
characterized by low flammability, low vapor pressure, stability at
∗ Corresponding author.
E-mail address: t.puzyn@qsar.eu.org (T. Puzyn).
http://dx.doi.org/10.1016/j.jhazmat.2015.10.023
0304-3894/© 2015 Elsevier B.V. All rights reserved.
high temperatures and ability to retain the liquid state for a wide
range of temperatures. These properties, together with the possibility of easy modification of the structure, decide on employing
ILs in many disciplines such as chemistry, biotechnology, chemical
engineering and industry [1–3]. Nowadays synthesized ILs belong
to the third generation of that compounds; they are designed to
possess certain biological activity combined with selected physical properties. Ionic liquids, having antibacterial activity and being
soluble in water, are examples of the third-generation ILs [4].
However, recent studies confirm negative impact of ILs on living
organisms, when the organisms are exposed at those novel materials. Regarding that the increasing production and use of ILs increase
probability of their emission to the environment, it is important to estimate the ability of these compounds to spread in the
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A. Rybinska et al. / Journal of Hazardous Materials 303 (2016) 137–144
environment. Low vapors pressures that characterize ILs decrease
the risk of air pollution by these substances and reduces their longrange atmospheric transport potential. However, since ILs have
significant solubility in water, natural waters are the most likely
media through which ILs would be transported in the environment. Moreover, the physical–chemical properties that make ILs
useful from the industrial perspective (i.e., high chemical and thermal stability) may suggest potential problems with degradation of
ILs and their high persistence in environment [5–7]. For these reasons, it is of vital importance to assess the possible transport and
fate of novel ILs, before they are introduced at the market.
N-octanol/water partition coefficient (KOW ) is a parameter that,
regarding low vapor pressure and high water solubility of ILs, is
crucial for the assessment of the environmental transport and fate.
It describes distribution of a substance between the organic and the
aqueous phase at equilibrium state. Logarithmic values of KOW are
commonly used in exposure assessment to express lipophilicity of
a chemical [8]. Highly lipophilic substances (log KOW » 0) could be
accumulated in water organisms, whereas more hydrophilic ones
(log KOW « 0) are preferably transported with water masses and,
thus, the uptake by organisms is significantly lower [9,10]. The values of n-octanol/water partition coefficient are also used as input
data for more comprehensive environmental multimedia models
that allows investigating the behavior of chemicals in the total
environment [11].
Unfortunately, data on physicochemical properties of ionic liquids are often incomplete or not available in the literature [12].
Therefore, regarding the large number of the existing and theoretically possible ILs, it is reasonable developing computational models
that enable predicting missing data in relatively short time, without necessity of performing additional experiments. An example
of such methods is Quantitative Structure–Activity/Property Relationship (QSAR/QSPR) approach, according to which the property
of interest might be predicted from the variance in chemical structures of the investigated group of compounds, when experimental
data are available only for a part of the group [13–19]. Since the
experimentally measured values of n-octanol/water partition coefficient are currently available only for a small part of the ionic
liquids, in this work we have developed a QSPR model that allows
predicting the logarithmic values of KOW of a wider set of ionic liquids from their chemical structure. Furthermore, with this model
we tried to determine the effect of structural variation of cations
and anions on the modeled property in the context of environmental transport and fate of ILs. We also estimated bioaccumulation
potential of all ionic liquids from prediction set by comparing predicted values of log KOW with criteria of the Stockholm Convention
[20].
2. Materials and methods
The process of developing QSPR models consists of several
basic steps, namely: (i) collecting available experimental data and
splitting them into training and validation sets, (ii) calculating
molecular descriptors, (iii) selecting the optimal, physically interpretable combination of the descriptors and training a QSPR model,
(iv) external validation of the model, (v) providing physical interpretation of the model [21]. Only appropriately developed and
validated model can be further used for making valuable predictions.
2.1. Experimental data
At first, we collected the experimental values of n-octanol/water
partition coefficient from available literature sources [22–28]. We
have found the data only for 53 ionic liquids. In addition, when
evaluating the data, we were forced to discard 10 compounds,
because the experimental details (i.e., the information about the
applied measurement method and the temperature at measurements) were missing. In effect, we obtained a set of 43 ILs, in which
the experimental values of the studied partition coefficient ranged
from −3.77 to 1.73 logarithmic units. The data have been measured
at 297.15 ± 2 K. We accepted this temperature range, because the
temperature variation up to 10 K does not affect the measurement
in a significant way [22].
In the next step, 43 ILs were sorted according to the increasing
values of log KOW . Then, the compounds were split into a training set
and a validation set. Data splitting procedure was performed using
so-called “Z:1 algorithm”, in which every Zth compound in a group
of the compounds sorted according to the predicted property (here
log KOW ) is assigned to the validation set, whereas the remaining
ones form the training set. In this case Z = 3 and we obtained the
training set containing 29 ionic liquids (67%) and the validation set
containing 14 compounds (Table A in the electronic Supplementary
material).
2.2. Molecular descriptors
In order to obtain molecular descriptors (numerical variables
that characterize molecular structures of the compounds used as
input variables in the QSPR model), we created molecular models of
all cations and anions present in the 43 studied ILs using the ChemSketch software [29]. Subsequently molecular geometries of cations
and anions (separately) were optimized with use of quantummechanical methods at the semi-empirical PM7 level [30] with
the MOPAC 2012 software [31]. Molecular models of anionic and
cationic moieties with optimized geometry were then used for calculating molecular descriptors. We obtained 1025 descriptors of
the cations’ and 1311 descriptors of the anions’ structures (Tables
B and C in the electronic Supplementary material, respectively).
This includes:
• Constitutional and topological descriptors (1D–2D),
• Weighted Holistic Invariant Molecular descriptors (WHIM) (3D),
• Quantum-mechanical descriptors (3D).
Constitutional and topological descriptors that take into account
one- and two-dimensional features of the molecules (1D–2D) as
well as three-dimensional (3D) WHIM descriptors were separately
calculated with Dragon software (version 6.0), whereas quantummechanical ones (e.g., frontier orbital energies, dipole moments)
were extracted directly from MOPAC 2012 output files after the
geometry optimization [31,32].
2.3. QSPR modeling
Next, we applied multiple linear regression method (MLR) to
find the quantitative relationship between molecular descriptors
(input variables) and log KOW (the modeled value) [33,34]. The
optimal combination of molecular descriptors was selected with
genetic algorithm (GA) [35] implemented in the QSARINS software
[36,37]. The following set of parameters has been applied to control
the genetic algorithm: the size of a population: 100, the mutation
rate: 45%. For more details, please refer to Fig. 1S in the electronic
Supplementary material. It should be noted that there are more
software packages for automated QSAR/QSPR modeling, which
offer various modeling techniques, such as Partial-Least-Squares
(PLS), Supporting Vector Machines (SVM) or neural networks (NN)
[38,39].
To assure credibility of the model, the following recommendations published by Organization for Economic Cooperation and
Development (OECD) were fulfilled [40]. Indeed, our model is based
A. Rybinska et al. / Journal of Hazardous Materials 303 (2016) 137–144
139
2.0
1.5
1.0
0.5
on precisely defined endpoint (log KOW ) and employs a common
method of modeling (MLR combined with GA). However, it should
be highlighted here that the model should be only used to predict
the endpoint values for the compounds belonging to its domain
of applicability (AD). This is because the predictions for such compounds, being in fact the results of the model’s interpolation, are
considered as much more precise than the predictions outside the
domain (extrapolation). Applicability domain of our model was
inspected with using the plot of the standardized residuals versus
the leverage values (Williams plot). The leverage values (hi ) that
illustrate similarity of particular compounds to the training set
were calculated in accordance with the following Eq. (1):
hi = xiT X T X
−1
xi
(1)
where xi is the vector of descriptors calculated for the considered
ith compound and X is the matrix of descriptors calculated for all
compounds from the training set. The standardized residuals were
calculated in accordance with the equation that could be found in
Supporting information (Eq. 1S).
Boarders of the applicability domain are determinate by the critical values of standardized residuals (threshold of three standard
deviation units, 3) and the threshold leverage (h*). Value of h* is
calculated as h* = 3p’/n, where p’ is the number of model variables
plus one, and n is the number of compounds in the training set
[41,42].
Goodness-of-fit of the QSPR model was measured by using
determination coefficient (R2 ) and root mean square error of calibration (RMSEC ) (Table D in Supplementary material). Stability
and robustness of the model was verified by the leave-one-out
cross-validation (LOO-CV) (Fig. 1) [43] and expressed by means
of leave-one-out cross-validation coefficient (Q2 CV ) and root mean
square error of cross-validation (RMSECV ). The presence of influential points in the training set has been additionally tested
with the approximate F-test proposed by Toth et al. [44], where
F = (1 − Q2 CV )/(1 – R2 ). Since the final model must be tested on compounds not previously used for its development, we calculated
external validation coefficient (Q2 EXT ) and root mean square error
of prediction (RMSEEXT ) based on chemicals from the validation
set, used both measures to estimate the predictivity [42,43,45,46].
In addition we have calculated concordance correlation coefficient
(CCC) as a complementary, more prudent measure of the model to
be externally predictive (Table D in Supplementary material) [45].
Finally, we proposed mechanistic interpretation of the model.
3. Results and discussion
3.1. Predicting log KOW with GA-MLR model
Firstly, we have developed a quantitative model describing the
linear relationship between the molecular structure of ionic liquids
and the logarithmic values of n-octanol/water partition coefficient
by using QSARINS software. We have identified two points outside
the applicability domain (the standardized residuals were higher
than ±3), namely 1,3-dihexyloxymethyl-imidazolium tetrafluoroborate and 1-butyl-3-methylimidazolium chloride. These points
were not taken into account during development of the final model
Predicted logKow
0.0
Fig. 1. Algorithm of leave-one-out cross-validation [43] (single column).
−0.5
−1.0
−1.5
−2.0
−2.5
−3.0
−3.5
Splitting
Training set
Validation set
−4.0
−4.5
−4.5
−4.0
−3.5
−3.0
−2.5
−2.0
−1.5
−1.0
−0.5
0.0
0.5
1.0
1.5
2.0
Experimental logKow
Fig. 2. Experimental and predicted values of log KOW (single column).
Eq. (2):
logK OW = −1.48(±0.09) + 0.93(±0.09)ON0VC + 0.55(±0.10)X5AvC
+ 0.47(±0.10)L3mA
p = 5.65.10−13 ,
(2)
R2
n = 41, k = 13, F = 1.22,
= 0.91, RMSEC = 0.42,
Q2 CV = 0.89, RMSECV = 0.48, Q2 EXT
= 0.83, RMSEEXT = 0.54,
CCC = 0.94where n is a number of all compounds and k is a
number of ionic liquids in validation set.
The model is a combination of three uncorrelated (r < 0.48)
molecular descriptors, namely: the overall modified Zagreb
index of order 0 by valence vertex degrees—calculated for
cation (ON0 VC ), the average valence connectivity index of order
5—calculated for cation (X5AvC ) and 3rd component size directional WHIM index weighted by atomic masses—calculated for
anion (L3mA ).
High (close to 1) values of R2 , Q2 CV , Q2 EXT , and CCC as well as low
and similar values of the errors (RMSEC , RMSECV , RMSEEXT ) indicate
that the developed model is well-fitted, robust and has satisfactory
predictive capabilities. Visual analysis of a plot that illustrates correlation between the experimental and predicted values of log KOW
additionally confirms high quality of the model (Fig. 2).
Applicability domain was verified based on the Williams plot
(Fig. 3). The X-axis of the plot (the leverage value) expresses similarity of a given compound, for which the prediction is made,
to the training compounds. The calculated critical leverage value
(similarity threshold) for this model is h* = 0.429. Interestingly,
all compounds are situated in the range of residuals differing by
±3 standard deviations from zero. This means uncertainty of the
prediction for all of them was acceptable, independently on the
structural difference.
After verifying that our model fulfills the OECD recommendations, we have applied it to predict missing values of the
n-octanol/water partition coefficient for 335 ionic liquids, for
which the experimentally measured values of log KOW had been
unavailable (prediction set). The prediction set contained ILs based
on various cations structures, including: imidazolium, pyridinium,
ammonium, phosphinium, pyrolidinium and sulfonium. Thus,
it was necessary to verify, whether the predictions have been
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A. Rybinska et al. / Journal of Hazardous Materials 303 (2016) 137–144
Standardized residuals
4
2
0
Splitting
Training set
−2
Validation set
h*
−4
0.1
0.2
0.3
0.4
0.5
Leverages
Fig. 3. Applicability domain—Williams plot (1,5 column).
performed within the domain of applicability. Since the molecular
descriptors were the only available data for the prediction set
(obviously, the observed values of log KOW were lacking), the
application of Williams plot for this purpose was impossible.
Instead, we employed Insubria graph (Fig. 4) that illustrates the
distribution of the ionic liquids in the space of descriptors we
used. The graph provides information about the leverage values
for the prediction set and about the relationship between the
predicted values for the training set and the prediction set [47].
Certainly, all the predicted values should be in range of the values
of log KOW observed for the training set. If any predicted value is
higher than the maximal observed KOW value from the training
set or is lower than the minimal observed KOW value from the
training set, it should be assumed that the value is a result of
extrapolation rather than of interpolation. We found (Fig. 4) that
majority of ionic liquids from the prediction set (82.7%) were
sufficiently structurally similar to the training set (leverages lower
than h* ; group 1 on Fig. 4). There are also compounds structurally
different from training set (leverages higher than h*; group 2 on
Fig. 4), although they lay between extreme values of experimental
values of log KOW . We also identified ionic liquids, significantly
differing from the training set by the structure (leverages higher
than h*; log KOW values higher that YMAX ; groups 3–5 on Fig. 4).
Group 3 contained ionic liquids with various types of cation.
Last two groups contained mainly phosphonium ILs, except one
ammonium ionic liquid. Interestingly, two phosphonium ILs
from last group, namely: tetrabutylphosphonium bromide and
tetrabutylphosphonium
bis[1,2-benzenediolato(2-)]borate(1-)
were characterized by extremely high leverage values. It should
be highlighted here that for the compounds from group #1 and #2
the predicted values could be considered as reliable, in contrary
to ILs from group #3, #4, and #5 (with leverages higher than h*
and log KOW values higher that YMAX ). We also have compared
additional experimental data with the values predicted by our
model to additionally confirm predictive ability of the presented
model (Table G in Supplementary information). Predictions for
majority of the additionally compared compounds are characterized by low values of the relative error. Only in case of
three ILs (namely: 1-ethylpyridinium bis(trifluoromethylsulfonyl)
imide, 1-octyl-3-methylimidazolium tetrafluoroborate and
1-ethyl-3-methylimidazolium
tris(pentafluoroethyl)
trifluorophosphate) those differences are significant (marked in
red in the Table G). However, it should be noticed that
one of mentioned ILs, namely 1-ethyl-3-methylimidazolium
tris(pentafluoroethyl)trifluorophosphate, has the leverage value
higher than the threshold. Thus, the predicted value for this ionic
liquid is less reliable. The rest of ILs from Table G have leverage
values less than threshold. Predicted values of log KOW for ionic
liquids from the prediction set together with the leverage values
are presented in the Table E in electronic Supplementary material.
Fig. 4. Insubria graph (1,5 column).
A. Rybinska et al. / Journal of Hazardous Materials 303 (2016) 137–144
141
Table 1
Structure impact on values of X5AvK descriptor.
M1 = 44
N
N
+
C
ON0V = 4.9
1-butyl-3-methylimidazolium
N
+
M1 = 48
ON0VC = 5.3
1-butyl-3-methylpyridinium
Fig. 5. Influence of a cation’s size on the first Zagreb index value (single column).
3.2. Relationship between the structure of ionic liquids and log
KOW
As mentioned, the model is a linear combination of three molecular descriptors: two descriptors related to the cation’s (ON0VC and
X5AvC ) and one related to the anion’s structure (L3mA ).
First cationic descriptor (ON0VC ) is the overall modified Zagreb
index of order 0 by valence vertex degrees. Original Zagreb indices
and theirs further modifications (i.e., overall modified Zagreb
indices) are derived from graphs representing hydrogen-depleted
molecules (molecular graphs). Vertexes in those graphs represent
particular atoms, whereas edges indicate chemical bonds. Zagreb
indices are calculated based on the vertex degrees in the graphs.
Vertex degree for a given atom (vertex) corresponds to the number
of other atoms (vertexes) connected to the one. As such, the group
of Zagreb indices characterizes molecular topology [48]; the indices
deliver information about the overall size of a molecule and molecular branching [49]. For example, when we comparing two different
cations (imidazolium and pyridinium) having the same (butyl) substituents (Fig. 5), once can notice that the calculated value of the
first Zagreb index (M1 ) is higher for larger (pyridinium) cation. In
our model, we used modified Zagreb indices (ON0V), where the
indices were calculated based on the valence vertex degrees (ıV )
instead of vertex degrees (ı). But, the values of ON0V have the same
tendency for the studied ionic liquids as the original Zagreb indices.
Second cationic descriptor (X5AvC ) belongs to the family of
valence connectivity indices. It delivers information about the
presence of double and triple bonds and about the number of heteroatoms (i.e., N, S, O) in the molecule [50,51]. We point out that the
value of X5AvC does not depend on type of cation. It’s decrease with
increasing number of double bonds and increase with decreasing
number of heteroatoms. Influence of presence of double bonds and
heteroatoms is presented in Table 1.
Cation name
Number of double bonds
X5AvK
1-Benzyl-3-methylimidazolium
4-(Dimethylamino)-1-hexylpyridinium
1-Methyl-3-hexylimidazolium
Butyl-(2-hydroxyethyl)-dimethylammonium
5
3
2
0
0.03
0.04
0.06
0.11
1-(Ethoxymethyl)-3-methyl-imidazolium
1-Methyl-3-hexylimidazolium
Number of heteroatoms
3
2
0.03
0.06
Table 2
Predicted values n-octanol/water partition coefficient for chosen ILs.
Ionic liquid
log KOW
1-Methyl-3-nonylimidazolium tetrafluoroborate
1-Methyl-3-octylimidazolium tetrafluoroborate
1-Methyl-3-pentylimidazolium tetrafluoroborate
1-Methylimidazolium tetrafluoroborate
0.67
0.31
-0.89
−2.15
Furthermore, the type of anion has also a considerable impact
on the value of n-octanol/water partition coefficient. L3mA anionic
descriptor belongs to the group of WHIM (Weighted Holistic Invariant Molecular) descriptors. WHIM descriptors are statistical indices
derived from projections of the atoms along with principal axes
[50]. The algorithm consists in performing a principal components
analysis [52] on the centered molecular coordinates by using a
weighted covariance matrix. The matrix can be obtained based on
different weighting schemes for the atoms. This includes weighting by: unit, atomic mass, van der Waals volume, Sanderson atomic
electronegativity, atomic polarizability and the electrotopological index of Kier and Hall [53,54]. In particular, L3m descriptor
describes molecular size along with the third principal direction
weighted by mass. For small anions (e.g., halides) the values of L3mA
are close to 0. Larger and more complex anions are characterized by
higher values of L3mA descriptor. For example, the value of L3mA is
equal to 0.55 for tetrafluoroborate anion, whereas the value of L3mA
raises up to 0.79 for bis(trifluoromethylsulfonyl) amide anion.
The meaning of descriptors employed in the model can be
simply explained in the context of the solvation processes mechanisms, i.e., interactions of a solute with the solvent involving
electrostatic forces, van der Waals forces and more specific effects,
such as hydrogen bonds formation [55]. The presence of ILs in
water changes the structure of the hydrogen bond network. Water
molecules orient themselves toward the ions. This requires that
many hydrogen bonds between water molecules must be broken,
especially in case of relatively large, highly branched ions of ILs.
Moreover, the formation of the solvation shells and the orientation of water molecules around the ILs cations and anions depend
on the charge of IL. Those factors could decide about ILs solvation [56]. Moreover, experimental data indicate that presence of
hydrophobic groups like alkyl chain have an effect on ILs solubility. Research [57] proved that the ethyl-substituted imidazolium
ionic liquids are less soluble in water and more soluble in 1-octanol
than the methyl-substituted compounds. This behavior is result
of van der Waals interactions between the alkyl chains of alcohol and ILs. Compound in which alkyl chain contains only few
carbon atoms (low value of ON0VC ) has got the lowest log KOW .
Those chemicals are the most hydrophilic ionic liquids and most
probably will not accumulate or concentrate in the environment.
Increasing the number of carbon atom in alkyl chain (higher value
of ON0VC ) cause notable growth of log KOW , ILs are more lipophilic
(Table 2).
Furthermore, based on regression coefficient value in our model
equation we pointed out which ion has got major influence on
log KOW value. High positive regression coefficient value of ON0VC
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A. Rybinska et al. / Journal of Hazardous Materials 303 (2016) 137–144
Table 3
Comparison of described models [24,57,58].
Models
Method
ILs in training set
R2
Internal validation
External validation
Present study
Model I
Model II
Model III
QSPR
LFER
ABF-MD
MD
Various
Chloride-based
Imidazolium-based
Various
0.92
0.98
–
–
0.87
–
–
–
0.83
–
–
–
descriptor suggests that chemical structure of cation is crucial for
n-octanol/water partition coefficient value. Type of anion structure
has got minor but still significant impact on log KOW value of ionic
liquids.
3.3. Comparison with the existing models
In this work we present the first QSPR model having a wide
applicability domain (training set represent ionic liquids with
diversified structures). We found three previously published models for predicting n-octanol/water partition coefficient (Table 4), but
any of them was developed according to typical Hansch approach.
In 2011 Cho et al. [26] (Table 3: Model I) published a model
to predict n-octanol/water partition coefficient of chloride-based
ionic liquids. They employed a modified Abraham equation (with
added experimentally determined anionic hydrophobicity parameter) and multiple linear regression as the method of modeling. The
model was characterized by high goodness of fit to the experimental data (R2 = 0.98). The authors demonstrated significant influence
of two descriptors, namely: molar volume of the cation and anion
hydrophobicity on the modeled property. Although the model was
well fitted, unfortunately the authors did not perform external
validation and have not provided any information about the assessment of applicability domain.
Kamath et al. [58] (Table 3: Model II) proposed model utilizing adaptive bias force-molecular dynamics (ABF-MD) simulations.
They predicted the values of log KOW for six imidazolium-based ILs
by using an equation, in which log KOW is dependent on the free
energy of hydration and solvation as well as on the temperature.
The free energy of hydration and solvation were calculated using
ABF-MD simulations.
Ammonium
Lee and Lin [59] (Table 3: Model III) used calculation of infinite dilution activity coefficients (IDAC) in water and octanol-rich
phases to predict KOW of 67 contrastive ionic liquids. Authors used
the Pitzer–Debye–Hückel (PDH) model (long-range coulomb interactions) and COSMO-SAC model (short-range molecular surface
interactions) to calculate the activity coefficients. That point of view
allowed estimating the effect of different physical interactions on
the value of KOW .
The above models were developed by various methods, so we
could compare them by two ways: (a) compare based on fitting
parameters and size of applicability domain; (b) putting together
values of log KOW predicted for the same ILs. Model I was characterized by high value of determination coefficient, but model was
developed for ionic liquid based only on chloride anion. Moreover
there was no information about validation method and AD. Model II
and III were obtain by molecular dynamics simulation, it is important that this technique does not use any fitting parameters as in
the QSPR model [59]. Compare to those models our QSPR model
could be considered as reliable; as a consequence of fulfill OECD
recommendation. Although, we put differential ionic liquids (varied in terms on cation and anion) to training set to provide wide
range of the applicability domain (Table 4).
Comparison between experimental and predicted log KOW for
the same set of ionic liquids (12 overlapping ILs and estimating
R2 can be found in Table F in Supplementary material) shows that
Model I gives the most accurate values. However, values obtained
by presented model and Model III are also well-fitted and R2 values are slightly lower than in Model I. Small set of ionic liquids
in Model II caused that this model were not taken into account.
Determination coefficient only allows estimating how models are
good fitted to experimental values. To compare predictivity for all
models internal and external validation should be made.
Imidazolium
Phosphonium
10
A
5
B
0
Predicted logKow
C
−5
0
20
40
60
100
150
Pyridinium
200
205
210
Pyrrolidinium
215
220
225
Sulfonium
10
Predicted logKow
A
−5
−4
−3
−2
−1
0
1
2
3
4
5
6
7
8
9
10
11
12
PYR
Su
5
Cation
B
AM
IM
PH
Py
0
C
−5
240
260
280
300
305
310
315
320
325
330
335
Ionic liquid IDs
Fig. 6. Comparison predicted values of log KOW with criterion established by Stockholm Convention (2 columns). For interpretation of the references to colour in the text,
the reader is referred to the web version of this article.
A. Rybinska et al. / Journal of Hazardous Materials 303 (2016) 137–144
3.4. Environmental fate of ionic liquids
Developed QSPR model was used to predict the logarithmic values of KOW for 335 ILs, for which the experimentally measured
values had been unavailable. Modeled property allows estimating
compound’s lipophilicity and thereby points out which compound
could be accumulated in organisms. To determinate which ILs could
be bioaccumulated, all predicted values of log KOW were compared
with criterion established by the Stockholm Convention [20]. In
accordance with convention, compound for which value of log KOW
is greater than 5could bioaccumulate in organisms. It means that
ionic liquids with log KOW > 5 could have negative impact for environment.
Predicted values of log KOW were presented at multi-panel plot
(Fig. 6) in which each panel is dedicated to group of ILs with the
same cation. We also determinate three sections accordingly to
range of log KOW values. Ionic liquids in section A (above red line)
have values of log KOW higher than 5. Compounds in section B
(between red and green line) have log KOW greater than 0, but less
than 5. Section C (under green line) contains ionic liquids with value
of log KOW smaller that 0. ILs that belong to section A could be bioaccumulated, those from section B are partially bioaccumulated and
those from section C are transported with water mass.
Most of ammonium ionic liquids (98%) belong to section
B or C. ILs with 2-hydroxyethyl substituent have the smallest
values of log KOW. Only one compound, N,N-dimethyl-Ndioctadecyloammonium chloride, has log KOW higher than
5. In case of imidazolium and pyridinium groups, majority
of ILs belong to section C. Values of log KOW higher than 0
for particular compounds is caused by large cation strucpresence
(e.g.
1,3-didecyl-2-methyl-3H-imidazolium
ture
and
3-[[[[(decyloxy)methoxy]methyl]amino]carbonyl]-1[(decyloxy) methyl]pyridinium). Anion influence on log KOW
is noticeable in pyrrolidinium group. ILs partially bioaccumulated (above green line) contain large anions like
bis(trifluoromethylsulfonyl)imide. Compounds with the lowest values of log KOW contain mostly halide anions. When
we consider one cation (1-butyl-1-methylpyrrolidinium) with
anions
(trifluoridotris(pentafluoroethyl))phosphate,
various
bis(trifluoromethylsulfonyl)imide, tetrafluoridoboranuide, bromide) we notice that values of log KOW is decreasing from 1.19
to −0.68. Phosphonium ionic liquids belong to section A entirely.
Even though predictions for phosphonium ILs are less reliable
(leverages higher than critical value and log KOW higher than
YMAX ) they are consistent with literature information about their
hydrophobicity [60]. Last group from prediction set contains only
one sulfonium ionic liquid that won’t be bioaccumulate.
Visual analysis of a plot (Fig. 6) shows that majority of ILs could
be transported with water mass, thus they are less dangerous for
environment. Only phosphonium and one ammonium ionic liquids
are highly lipophilic. Lipophilicity is strongly correlated with ionic
liquid toxicity. Research proved that phosphonium ionic liquids are
accumulating in Escherichia coli cells, mainly in lipid membranes
[61]. It was also proved that toxicity of phosphonium ionic liquids
increase with the alkyl chain extending and they could be more
toxic than the analog imidazolium-based ILs [62].
4. Conclusions
In our work we developed a QSPR model to predict the values
of log KOW for 335 ionic liquids, for which the experimental values
were not available in literature. The presented QSPR model fulfills the quality recommendations set by OECD. It is characterized
by satisfactory goodness-of-fit (R2 = 0.91, RMSEC = 0.42), robustness (Q2 CV = 0.89, RMSECV = 0.48) and predictivity (Q2 EXT = 0.83;
143
RMSEEXT = 0.54). Based on the Williams plot, we observed that the
model correctly predicted the modeled values despite the insufficient similarity in ionic liquids structure.
Furthermore, we determined the effect of the cation and anion
structures on the modeled property. We found that the values of
n-octanol/water coefficient depend on the cation in a significant
way. ILs with the shortest alkyl substituents in cations are the most
hydrophilic (have the lowest values of log KOW ). The increase in the
length of alkyl chain causes significant increase of the log KOW values. Hydrophilicity of the ionic liquid is also affected by the anion’s
structure, but this influence in minor. Ionic liquids with heavily branched cation and anion exhibit relatively high lipophilicity.
Information about the influence of the structure on hydrophilicity
could be very useful when designing new ionic liquids that belong
to third generation of ILs.
When comparing the results obtained from our QSPR model
with the results of others [26,58,59], we have found that values of
log KOW predicted in current study were more reliable, thanks to a
more diversified training set (three types of cations and five types of
anions groups). The interpretation of descriptors in the presented
model equation provides a clear explanation of the relationship
between the structure of ionic liquid and its KOW value. Furthermore, the unquestionable advantage of the model presented in this
study is that it fulfills all quality criteria for developing QSPRs recommended by OECD. Developed model could be successfully used
to predict the log KOW values for each type of ionic liquids without
necessity of performing additional time-consuming and expensive
experiments.
We also compared predicted log KOW values with norms established by the Stockholm Convention. According to those results we
were able to point out that phosphonium-based ILs could have
negative impact on environment. Their ability to bioaccumulation and potential toxicity should be considered before applying.
In our opinion the predicted values of n-octanol/water partition
coefficient for new ILs could be very crucial in assessment the environmental risk and fate of these chemicals.
Acknowledgments
We would like to thank Prof. Paola Gramatica from the University of Insubria for giving access to QSARINS software.
This material is based on research sponsored by the Polish
National Science Center (grant no. UMO-2012/05/E/NZ7/01148;
Project “CRAB”).
Appendix A. Supplementary data
Supplementary data associated with this article can be found, in
the online version, at http://dx.doi.org/10.1016/j.jhazmat.2015.10.
023.
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