3. PHOSPHATE • • • • Derived from phosphoric acid (H3PO4) Phosphate residue is attached to pentose sugar DNA/RNA via the 5’C by a phosphodiester link Acidic, Nucleic acid All residues in the DNA/RNA carry a negative charge in physiologic Ph NUCLEOSIDE FORMATION NUCLEIC ACID • NUCLEOSIDE – a two sub unit molecule in which a pentose sugar is bonded to a nitrogen containing a heterocyclic base. RULE: • Base is always attached to Carbon 1 of the sugar • Condensation reaction – A molecule of water is formed as the 2 molecules bond RIBONUCLEIC ACID (RNA) • together. NUCLEOSIDE FORMATION • • • • • Pyrimidine bases, suffix – idine is used (cytidine, thymidine, uridine) Purine bases, the suffix – osine is used (adenosine, guanosine) Prefix deoxy – indicates that sugar unit is deoxyribose (no oxygen) DEOXYRIBOSE – DNA RIBOSE - RNA NUCLEOTIDE FORMATION • • Phosphate group is attached to the sugar at carbon 5 position via phosphoester linkage Water molecule is produced formation • • Nucleotide polymer in which each of the monomers contains ribose, a phosphate group, and one of the heterocyclic bases: Adenine, Cytosine, Guanine or Uracil Occurs in all parts of cell Primary function is Synthesis of Proteins DEOXYRIBONUCLEIC ACID (DNA) • • • • • Nucleotide polymer in which each of the monomer contains deoxyribose, a phosphate group, and one of the heterocyclic bases: Adenine, Cytosine, Guanine, or Thymine Found within the cell nucleus Primary function is the storage and transfer of genetic information This information is used to control many functions of a living cell DNA is passed from existing cells to new cells during cell division SABIDURIA, NICOLE ANN A 2 PRIMARY STRUCTURE OF NUCLEIC ACID • Polynucleotide chains have sense or directionality (3’ unreacted hydroxyl group and unreacted 5’ phosphate group) • • • • – Nature of two polynucleotide chains in DNA double helix means that there is a 5’ end and a 3’ end at both ends of double helix. COMPLEMENTARY BASES – Pairs of bases in a nucleic acid structure that can hydrogen bond to each other. A-T, G-C ANTIPARALLEL Polynucleotide have individuality (nucleotide base sequence) Basis for the different amino acids. BASE PAIRING • • The size of the interior of the DNA double helix, limits the base pairs that can hydrogen bond to one another. Only pairs involving one small base (pyrimidine) and one large base (purine) correctly fit. • PREDICT THE SEQUENCE OF BASES IN THE DNA STRAND COMPLEMENTARY TO THE SINGLE DNA STRAND SHOWN: • ANS: 3’ T-T-A-C-G-T-C-G-A 5’ DNA: • • A-T (Adenine-Thymine) (apples in the tree) G-C (Cytosine-Guanine) (car in the garage) • 5’ G-T-A-A-C-T-C-G-A 3’ ANS: 3’ C-A-T-T-G-A-G-C-T 5’ • The sugar unit in the backbone of RNA is ribose In RNA, Uracil instead of thymine, pairs with adenine RNA is a single stranded molecule. RNA molecules are smaller than DNA molecules RNA: • • RIBONUCLEIC ACIDS A-U (Adenine-Uracil) G-C (Guanine- Cytosine) WATSON-CRICK MODEL • • • • 5’ A-A-T-G-C-A-G-C-T 3’ Combination of two single strands The double Helix Sugar-phosphate backbone outside, bases inside Bases form specific base pairs, held together by hydrogen bonds • • • TYPES OF RNA MOLECULES • • • • • Heterogenous nuclear RNA (hnRNA) Messenger RNA (mRNA) Small nuclear RNA (snRNA) Ribosomal RNA (rRNA) Transfer RNA (tRNA) HETEROGENOUS NUCLEAR RNA (hnRNA) • • RNA formed by DNA transcription Post-transcription processing converts the hnRNA to mRNA SABIDURIA, NICOLE ANN A 2 MESSENGER RNA (Mrna) • RNA that carries instructions for protein synthesis (genetic information) to the sites for protein synthesis SMALL NUCLEAR RNA (snRNA) • RNA that facilitates the conversion of heterogenous nuclear RNA to messenger RNA RIBOSOMAL RNA (rRNA) • RNA that combines with specific proteins to form ribosomes, the physical sites for protein synthesis. TRANSFER RNA (tRNA) • • RNA that delivers amino acids to the sites for protein synthesis Smallest RNA SABIDURIA, NICOLE ANN A 2