Unit 6: Gene Expression and Regulation Mastery Checklist Unit 6: Gene Expression and Regulation Mastery Checklist ❏ Describe the structures involved in passing hereditary information from one generation to the next. ❏ Describe the structure of DNA. ❏ Describe the structure of RNA. ❏ Discuss how DNA is used to store and pass on genetic information. ❏ Compare and contrast prokaryotic and eukaryotic chromosomes. ❏ Describe the characteristics of DNA that allow it to be used as the hereditary material. ❏ Discuss how nucleotides participate in base pairing. ❏ Name the purines and describe them. ❏ Name the pyrimidines and describe them. ❏ Describe the mechanisms by which genetic information is copied for transmission between generation. ❏ Explain how DNA replication ensures continuity of hereditary information. ❏ Explain how DNA is synthesized in the 5’ to 3’ direction. ❏ Illustrate how DNA replication is a semi-conservative process. ❏ Define the role of helicase. ❏ Define the role of topoisomerase. ❏ Explain how RNA primers are used to initiate DNA synthesis. ❏ Outline the similarities and differences between DNA synthesis on the leading strand and lagging strands. ❏ Define the role of ligase. ❏ Describe the mechanism by which genetic information flows from DNA to RNA to protein. ❏ Relate the sequence of RNA bases to the function of the RNA molecule. ❏ Describe the three types of RNA molecules. ❏ Explain how genetic information is coded from DNA molecules into RNA molecules. ❏ Explain how genetic information in RNA molecules is used to make proteins. ❏ Explain the role of RNA polymerase in transcription. ❏ Discuss alternative names of the template strand. ❏ Explain how the template strand is chosen by the cell. ❏ Discuss the modifications that are made to mRNA in eukaryotic cells. ❏ Explain the difference between introns and exons.. ❏ Define alternative splicing. ❏ Explain how the phenotype of an organism is determined by its genotype. ❏ Describe the location of translation. ❏ Identify when translation occurs in prokaryotic cells. ❏ State the steps of translation. ❏ State what is needed for translation to begin. ❏ Illustrate the structure of mRNA. ❏ Discuss codons and explain how to use a codon chart. ❏ Explain how this use of the genetic code is used for evidence of common ancestry. ❏ Define the role of tRNA in translation. ❏ State the role of a stop codon, and explain what happens when it is reached. ❏ Explain what happens at the end of translation. ❏ Discuss how retroviruses utilize an alternate flow of information from RNA to DNA. ❏ Describe the structures involved in passing hereditary information from one generation to the next. ❏ Describe the structure of DNA. ❏ Describe the structure of RNA. ❏ Discuss how DNA is used to store and pass on genetic information. ❏ Compare and contrast prokaryotic and eukaryotic chromosomes. ❏ Describe the characteristics of DNA that allow it to be used as the hereditary material. ❏ Discuss how nucleotides participate in base pairing. ❏ Name the purines and describe them. ❏ Name the pyrimidines and describe them. ❏ Describe the mechanisms by which genetic information is copied for transmission between generation. ❏ Explain how DNA replication ensures continuity of hereditary information. ❏ Explain how DNA is synthesized in the 5’ to 3’ direction. ❏ Illustrate how DNA replication is a semi-conservative process. ❏ Define the role of helicase. ❏ Define the role of topoisomerase. ❏ Explain how RNA primers are used to initiate DNA synthesis. ❏ Outline the similarities and differences between DNA synthesis on the leading strand and lagging strands. ❏ Define the role of ligase. ❏ Describe the mechanism by which genetic information flows from DNA to RNA to protein. ❏ Relate the sequence of RNA bases to the function of the RNA molecule. ❏ Describe the three types of RNA molecules. ❏ Explain how genetic information is coded from DNA molecules into RNA molecules. ❏ Explain how genetic information in RNA molecules is used to make proteins. ❏ Explain the role of RNA polymerase in transcription. ❏ Discuss alternative names of the template strand. ❏ Explain how the template strand is chosen by the cell. ❏ Discuss the modifications that are made to mRNA in eukaryotic cells. ❏ Explain the difference between introns and exons.. ❏ Define alternative splicing. ❏ Explain how the phenotype of an organism is determined by its genotype. ❏ Describe the location of translation. ❏ Identify when translation occurs in prokaryotic cells. ❏ State the steps of translation. ❏ State what is needed for translation to begin. ❏ Illustrate the structure of mRNA. ❏ Discuss codons and explain how to use a codon chart. ❏ Explain how this use of the genetic code is used for evidence of common ancestry. ❏ Define the role of tRNA in translation. ❏ State the role of a stop codon, and explain what happens when it is reached. ❏ Explain what happens at the end of translation. ❏ Discuss how retroviruses utilize an alternate flow of information from RNA to DNA. ❏ Describe the types of interactions that regulate gene expression. ❏ Define regulatory sequences. ❏ Explain how epigenetic changes play a role in gene expression. ❏ Discuss how the levels at which genes are expressed can influence the phenotype of a cell or organism. ❏ Explain how the location of regulatory sequences relates to their function. ❏ Define operons. ❏ Discuss the role of operons in prokaryotes. ❏ Define transcription factors. ❏ Discuss the role of transcription factors in eukaryotes. ❏ Explain how the binding of transcription factors to promoter regions affects gene expression and/or the phenotype of the organism. ❏ Explain how promoters function. ❏ Discuss how negative regulatory molecules can affect gene expression. ❏ Explain the connection between the regulation of gene expression and phenotypic differences in cells and organisms. ❏ Explain the impact of gene regulation. ❏ Define the role of RNA molecules in regulating gene expression. ❏ Describe the various types of mutation. ❏ Explain how changes in genotype result in changes in phenotype. ❏ Discuss the possible consequences to alterations in a DNA sequence. ❏ Explain how changes in genotype may result in changes in phenotype. ❏ Explain how random mutations in DNA can occur. ❏ Define the primary source of genetic variation. ❏ Explain how errors in mitosis or meiosis can result in changes in phenotype. ❏ Define polyploidy, and provide examples. ❏ Explain how alterations in DNA sequences contribute to variation that can be subject to natural selection. ❏ Discuss how changes in phenotype can lead to natural selection in a species. ❏ Explain the use of genetic engineering techniques in analyzing or manipulating DNA. ❏ Explain how gel electrophoresis separates DNA fragments. ❏ Explain the outcome of polymerase chain reaction. ❏ Explain how bacterial transformation occurs. ❏ Explain how DNA sequencing determines the order of nucleotides in a DNA molecule. ❏ Describe the types of interactions that regulate gene expression. ❏ Define regulatory sequences. ❏ Explain how epigenetic changes play a role in gene expression. ❏ Discuss how the levels at which genes are expressed can influence the phenotype of a cell or organism. ❏ Explain how the location of regulatory sequences relates to their function. ❏ Define operons. ❏ Discuss the role of operons in prokaryotes. ❏ Define transcription factors. ❏ Discuss the role of transcription factors in eukaryotes. ❏ Explain how the binding of transcription factors to promoter regions affects gene expression and/or the phenotype of the organism. ❏ Explain how promoters function. ❏ Discuss how negative regulatory molecules can affect gene expression. ❏ Explain the connection between the regulation of gene expression and phenotypic differences in cells and organisms. ❏ Explain the impact of gene regulation. ❏ Define the role of RNA molecules in regulating gene expression. ❏ Describe the various types of mutation. ❏ Explain how changes in genotype result in changes in phenotype. ❏ Discuss the possible consequences to alterations in a DNA sequence. ❏ Explain how changes in genotype may result in changes in phenotype. ❏ Explain how random mutations in DNA can occur. ❏ Define the primary source of genetic variation. ❏ Explain how errors in mitosis or meiosis can result in changes in phenotype. ❏ Define polyploidy, and provide examples. ❏ Explain how alterations in DNA sequences contribute to variation that can be subject to natural selection. ❏ Discuss how changes in phenotype can lead to natural selection in a species. ❏ Explain the use of genetic engineering techniques in analyzing or manipulating DNA. ❏ Explain how gel electrophoresis separates DNA fragments. ❏ Explain the outcome of polymerase chain reaction. ❏ Explain how bacterial transformation occurs. ❏ Explain how DNA sequencing determines the order of nucleotides in a DNA molecule.