TOPIC 1 (CHAPTER 1 and 18 in Mader’s textbook) A View of Life Subtopic 1.1: How to Define Life Subtopic 1.2: Evolution, The Unifying Concept of Biology Subtopic 1.3: Origin of Life Subtopic 1.4: History of Life Subtopic 1.5: The process of Science To describe the origin, nature, level of life and endosymbiotic theory of the earliest multicellular organisms Subtopic 1.1: How To Define Life • Biology is the scientific study of life. • There is great diversity among living things – in ocean and terrestrial organisms • Living things: are composed of the same chemical elements as nonliving things. obey the same physical and chemical laws that govern everything in the universe. Diversity of Life Despite diversity, all living things share the same basic characteristics Characteristics of Life Adaptation Reproduce & develop Organized Materials and energy Respond Homeostasis Characteristics of Life: living things are organized • The levels of biological organization range from atoms to the biosphere. • The cell is the basic unit of structure and function of all living things. Unicellular or multicellular • Each level of organization is more complex than the level preceding it. As biological complexity increases, each level acquires new emergent properties. Characteristics of Life: acquire material and energy • Maintaining organization and carrying on life requires an outside source of energy (food, sunlight, chemicals) • Energy is the ability to do work. Energy is required to maintain organization and conduct lifesustaining processes such as chemical reactions. • The sun is the ultimate source of energy for nearly all life on Earth. Photosynthetic organisms capture solar energy and perform photosynthesis. Photosynthesis - converts solar energy into the chemical energy of carbohydrates. Characteristics of Life: maintain homeostasis • Homeostasis is the maintenance of internal conditions within certain boundaries. Ability to maintain a state of biological balance Feedback systems monitor internal conditions and make adjustments. Characteristics of Life: respond to stimuli • Living things interact with the environment and respond to changes in the environment Ability to respond often produce movement. Characteristics of Life: reproduce and develop • All living organisms must reproduce to maintain a population. • manner of reproduction varies among different organisms. • When organisms reproduce, they pass on copies of their genetic information (genes) to the next generation. Genes determine the characteristics of an organism. Genes are composed of DNA (deoxyribonucleic acid). Characteristics of Life: have adaptations • Adaptation - modification that makes an organism better able to function in a particular environment. • diversity of life exists because over long periods of time, organisms respond to changing environments by developing new adaptations. • Evolution is the change in a population of organisms over time to become more suited to the environment. Subtopic 1.2: Evolution, The Unifying Concept of Biology • The theory of evolution explains the diversity and unity of life. Theory suggests how all living things descended from a common ancestor. Common descent with modification – enable organisms to be adapted to their environment Darwin’s Theory of Evolution by natural selection is the principle of common ancestry All life earth can be traced back to a single ancestor • The ancestor is called last universal common ancestor (LUCA) common to all organisms that live and have lived since life began • Life comes from life Molecules of living organisms called biomolecules First cells had to arise from nonliving chemicals, inorganic substances Natural Selection • Evolutionary mechanism proposed by Charles Darwin • Some aspect of environment selected which traits are more apt to pass on to next generation Individual with favorable traits produce the greater number of offspring that survive and reproduce Increase frequency of those traits in population • Mutation fuel natural selection – introduce variations members of a population Natural Selection Natural Selection Some plants within a population exhibit variation in leaf structure. Deer prefer a diet of smooth leaves over hairy leaves. Plants with hairy leaves reproduce more than other plants in the population. Generations later, most plants within the population have hairy leaves, as smooth leaves are selected against. Evolutionary Tree of Life An evolutionary tree is like a family tree. An evolutionary tree traces the ancestry of life on Earth to a common ancestor. NAI 2015 common ancestor (first cells) BACTERIA common ancestor (first cells) ARCHAEA BACTERIA common ancestor (first cells) ARCHAEA cell with nucleus EUKARYA BACTERIA common ancestor (first cells) ARCHAEA Protists cell with nucleus EUKARYA BACTERIA common ancestor (first cells) ARCHAEA Protists cell with nucleus Plants EUKARYA Fungi Animals BACTERIA common ancestor (first cells) ARCHAEA Protists Plants cell with nucleus EUKARYA Fungi Animals Past Time Present Organizing Diversity • Because life is so diverse, it is helpful to group organisms into categories Taxonomy Branch of biology that identifies, names and classifies organisms Systematics Study of evolutionary relationship between organisms both extinct and modern Organizing Diversity Subtopic 1.3: Origin of Life The Existence of Earth: 15 billion years ago It started as a massive cloud of interstellar gases and cosmic dust Gravitational attraction condensed the vast cloud of interstellar gases and cosmic dust into a gigantic spinning disc. Big bang event was about 13.8 BYA (Billion Years Ago) is considered as the age of universe with the formation of subatomic particle and later become simple atom. After the explosion, heavier elements formed the cores of the planets, The Earth came into being about 4.6 BYA The enormous heat of the earth’s interior produced massive build up of hot gases, sparking violent volcanic eruptions that thrust molten rock and gases out through the crust. 26 The Earth’s mass provides a gravitational field strong enough to hold an atmosphere. Early Earth’s atmosphere differed from the current atmosphere, consisting of: a. water vapor, (because too hot) b. nitrogen, c. carbon dioxide, d. small amounts of hydrogen, methane (CH4), ammonia (NH3), hydrogen sulfide (H2S), and carbon monoxide, no oxygen. As the Earth cooled, H2O vapor condensed to form liquid H2O, and rain collected in oceans. It was in the early ponds that life emerged through the process of chemical evolution. The molecules of the gases were ionizing by energy to form C, H, N and O ions. C, H, N, O ions undergo interactions to form organic monomer and organic polymer (macromolecules) such amino acids, fatty acids, hydrocarbons and nitrogenous bases compounds. 27 Water vapor condensed into droplets that carried nucleotides and amino acids to be in the primitive oceans → primordial soup (organic soup) → Bubbles/Protobionts/protocell →LIFE (see LUCA later) Organic molecules formed on primitive earth: Where Life Started. Life formed organisms. Organisms develop and diversify through the process of organic evolution which leads to 6 kingdoms of life. 28 Stages of Origin of Life Stage 1: Evolution of Monomers Stage 2: Evolution of Polymers Stage 3: Evolution of protocells Stage 4: 29 NAI 2015 Evolution of self replicating system (living cells) Stage 1: Evolution of Monomers Primordial soup Iron-sulfur World • Monomers came from reactions in ocean thermal vents • Monomers came from reactions in the atmosphere • Experiments performed by Miller and Urey (1953) Extraterrestrial Origin • Monomers came from outer space Stage 1: Evolution of Monomer • 3 hypotheses to explain how organic monomers could have evolved. 1ST : PRIMORDIAL SOUP HYPOTHESIS AND THE MILLER-UREY EXPERIMENT Primordial soup hypothesis – 1920’s by Oparin (Russian) and Haldane (British) Propose that early earth had very little O2 and made up of water vapor, H2, methane and ammonia When these chemicals mixed, they contain elements C and N, which can make amino acid – the reaction activated by energy from solar radiation, volcanic eruptions and lightning Ocean filled with many different organic molecules like soup Stage 1: Evolution of Monomer • 3 hypotheses to explain how organic monomers could have evolved. 1ST : PRIMORDIAL SOUP HYPOTHESIS AND THE MILLER-UREY EXPERIMENT The Miller Urey Experiment • Conducted an experiment to test the Oparin/Haldane hypothesis. To show that simple organic molecules could be made from inorganic compounds • The experiment trying to recreate the conditions of pre-biotic earth: They succeeded in creating organic molecules. Miller and Urey Experiment Miller-Urey Experiment electrode stopcock for adding gases electric spark CH4 NH3 H2 H 2O stopcock for withdrawing liquid condenser boiler heat gases hot water out cool water in liquid droplets small organic molecules Stage 1: Evolution of Monomer • 3 hypotheses to explain how organic monomers could have evolved. 2ND : IRON SULPHUR HYPOTHESIS • Wachtershauser (1980) proposed that thermal vents at the bottom of the earth ocean provide all the elements and conditions necessary to synthesize organic monomers known as iron-sulphur world hypothesis • Hypothesis states that: Dissolved gases emitted from thermal vents such as CO, ammonia, hydrogen sulphide Together with the action of catalyst effects from iron and nickel would produced organic molecules Stage 1: Evolution of Monomer • 3 hypotheses to explain how organic monomers could have evolved. 3RD : EXTRATERESSTIAL ORIGINS • Comet and meteorites perhaps carrying organic chemicals, have pelted earth throughout history • The organic chemicals could have seeded the chemical origins of life on early earth • Bacterium like cells evolved first on another planet and were carried to earth Meteorite on mars landed on earth some 13,000 y.a Tiny rod similar to fossilized bacteria was found on the meteorite Proof of life on mars?? Stage 2: Evolution of Polymers • In cell, monomers join to form polymers in the presence of enzymes. 1ST : IRON SULPHUR WORLD HYPOTHESIS • Have shown that organic molecules will react with amino acids to form peptides in the presence of iron-nickels sulfides (found in thermal vents) 2ND : PROTEIN-FIRST HYPOTHESIS • Sydney Fox has shown that amino acids polymerize when exposed to heat proteinoids micropsheres (composed of proteins but have properties of cells) Fox’s experiment showed that by heating some proteins, proteinoids and microsphere form spontaneously Stage 2: Evolution of Polymers 3RD : RNA-first hypothesis • Only the macromolecule RNA was needed at the beginning to lead to the first cell. • Thomas Cech and Sidney Altman (1980s) won Nobel Prize for their discovery Stage 3: Evolution of Protocells Protocell: the 1st cell on earth Energy from the sun and lightning strikes molecules in the sea molecules combine to form simple organic molecules Larger molecules continue to form, making simple amino acids Amino acids are the building blocks of life, Early protocells were probably made of groups of amino acids Stage 3: Evolution of Self Replication System • RNA- first hypothesis suggest that RNA would first to evolve First true cells would have RNA genes These genes carried out enzymatic reaction of protein synthesis • Protein-first hypothesis – proteins or at least poly peptides were the fisrt to arise of three (DNA, RNA and protein) DNA came after proteins 1.4 : The History Of Life The Geologic Timescale • Geologists have divided geologic timescale into eras, periods and epochs. • It was derived from accumulation of data from the age of fossils. • There are 4 eras, PPMC : Precambrian Paleozoic Mesozoic Cenozoic Precambrian Time • Life arose in the Precambrian Era The Precambrian encompasses 87% of the geologic time scale. The first modern-type cells were prokaryotes (~3.5 BYA). Simple cells: do not have nucleus, membrane-bounded organelles. Can live in the most inhospitable environments (hot springs, salty lakes and oxygen-free swamps) Early bacteria probably resembled the archaea that live in hot springs today. 3.8 BYA, the first chemical fingerprints of complex cells occur; at 3.46 BYA, photosynthetic prokaryotic cells appear; cyanobacteria. 46 NAI 2015 Precambrian Time: Eukaryotic Cells Arise • The endosymbiotic theory states that a nucleated cell engulfed prokaryotes, which then became organelles. • Evidence includes: Present-day mitochondria and chloroplasts have a size that lies within the range of that for bacteria. Mitochondria and chloroplasts have their own DNA and make some of their own proteins. Mitochondria and chloroplasts divide by binary fission similar to bacteria. The outer membrane of mitochondria and chloroplasts differ. Precambrian Time: Eukaryotic Cells Arise • Multicellular protists began to appear • Soft-bodied invertebrates developed near the end of the Precambrian 48 NAI 2015 The Tree of Life 49 NAI 2015 Paleozoic Era Paleozoic Era • Lasted over 300 million years and was a very active period with three major mass extinctions • Cambrian Animals The Cambrian Period saw invertebrates flourish; invertebrates lack a vertebral column. Mesozoic Era • Triassic Period Nonflowering seed plants became dominant • Jurassic Period Dinosaurs achieved enormous size Mammals remained small and insignificant • Cretaceous Period Dinosaurs declined at the end of the Cretaceous period due to a mass extinction Mammals: Began an adaptive radiation Cenozoic Era • Mammals and plants continued adaptive radiation • Primates evolution began Mammals of the Oligocene Epoch 54 Woolly Mammoth of the Pleistocene Epoch 1.5 : The Process Of Science • The scientific method is a standard series of steps used in gaining new knowledge through research. • The scientific method can be divided into four steps: Observation Hypothesis Experiments and Data Collection Conclusion THE END