Articles in PresS. Am J Physiol Renal Physiol (September 7, 2011). doi:10.1152/ajprenal.00419.2011 1 2 WT1 INTERACTING PROTEIN (WTIP) REGULATES PODOCYTE PHENOTYPE BY CELLCELL AND CELL-MATRIX CONTACT REORGANIZATION 3 4 5 6 7 8 9 10 11 Jane, H. Kim *1, Amitava Mukherjee2, Sethu Madhavan2, Martha Konieczkowski2 and John R. Sedor, MD1,2,. 1 Departments of Physiology and Biophysics and 2Medicine and the Rammelkamp Center for Education and Research, MetroHealth System Campus, Case Western Reserve University, Cleveland, OH, United States 12 13 14 Running Title: WTIP regulates podocyte cell-cell and cell-matrix junctions 15 16 Key words: G-proteins, cytoskeleton, RhoGTPase 17 18 Corresponding author: 19 John R Sedor, MD 2500 MetroHealth Drive R415 Cleveland, OH 44109-1998 E-mail: john.sedor@case.edu Phone: 216-778-4993 Fax: 216-778-8248 20 21 22 23 24 25 26 1 Copyright © 2011 by the American Physiological Society. 27 ABSTRACT 28 Podocytes respond to environmental cues by remodeling their slit diaphragms and cell-matrix 29 adhesive junctions. WT1 Interacting Protein (Wtip), an Ajuba family LIM domain scaffold protein 30 expressed in the podocyte, coordinates cell adhesion changes and transcriptional responses to 31 regulate podocyte phenotypic plasticity. We evaluated effects of Wtip on podocyte cell-cell and 32 cell-matrix contact organization using gain-of- and loss-of-function methods. Endogenous Wtip 33 targeted to focal adhesions in adherent but isolated podocytes and then shifted to adherens 34 junctions after cells made stable, homotypic contacts. Podocytes with Wtip knockdown (shWtip) 35 adhered but failed to spread normally. Non-contacted shWtip podocytes did not assemble actin 36 stress fibers and their focal adhesions failed to mature. As shWtip podocytes established cell- 37 cell contacts, stable adherens junctions failed to form and F-actin structures were disordered. In 38 shWtip cells, cadherin and β-catenin clustered in irregularly distributed spots that failed to 39 laterally expand. Cell surface biotinylation showed diminished plasma membrane cadherin, β- 40 catenin, and α-catenin in shWtip podocytes, although protein expression was similar in shWtip 41 and control cells. Since normal actin dynamics are required for organization of adherens 42 junctions and focal adhesions, we determined if Wtip regulates F-actin assembly. 43 Undifferentiated podocytes did not elaborate F-actin stress fibers, but when induced to 44 overexpress WTIP, formed abundant stress fibers, a process blocked by the RhoA inhibitor, C3 45 toxin, and a RhoA kinase inhibitor. WTIP directly interacted with Rho guanine nucleotide 46 exchange factor (GEF) 12 (Arhgef12), a RhoA-specific GEF enriched in the glomerulus. In 47 conclusion, stable assembly of podocyte adherens junctions and cell-matrix requires Wtip, a 48 process that may be mediated by spatio-temporal regulation of RhoA activity through 49 appropriate targeting of Arhgef12. 50 2 51 INTRODUCTION 52 Podocytes are highly differentiated glomerular epithelial cells, characterized by numerous 53 interdigitating foot processes (FP), which elaborate highly specialized cell-cell contacts known 54 as slit diaphragms (SD). FPs are defined by three membrane domains: the apical membrane 55 domain, the SD protein complex, and the basal membrane domain (19). The submembranous 56 region of all three compartments is connected to the FP actin cytoskeleton (16, 25). Therefore, 57 the actin cytoskeleton plays a crucial role in determining and maintaining the overall structure of 58 the SD. Changes in the actin cytoskeleton from coordinated stress fibers into a dense actin mat 59 is synonymous with podocyte FP effacement and SD disruption (19, 24, 35). Identification of 60 proteins that regulate or stabilize the actin cytoskeleton is important for understanding the 61 maintenance and function of the glomerular filtration barrier (25, 37). Recently, an increasing 62 number of actin-associated proteins in the podocyte have been identified, thus highlighting the 63 significance of dynamic actin cytoskeleton regulation in the maintenance of the glomerular 64 filtration barrier. 65 The actin cytoskeleton not only provides mechanical support for the cell, but also determines 66 cell shape, enables cell movement, and is required for assembly of normal cell-matrix and cell- 67 cell adhesive contacts. Members of the Rho family of small guanosine triphosphatases 68 (RhoGTPases), RhoA, Rac1 and Cdcd42, have emerged as key regulators of the actin 69 cytoskeleton. The activation of RhoA, Rac1 and Cdcd42 leads to assembly of actin stress fibers, 70 protrusive actin-rich lamellipodia, and protrusive actin-rich filopodia, respectively (7, 13, 14). 71 Furthermore, through their interactions with multiple target proteins, they can coordinate other 72 cellular activities, such as gene transcription, with changes in cellular adhesion. Recent 73 observations also suggest that subcellular pools of RhoGTPases operate to regulate specific 74 morphogenic events in different cellular domains (29). 3 75 Focal adhesions are specialized regions of cell adhesions to the extracellular matrix, where 76 integrin receptors associate with a number of structural and signaling proteins to form a link with 77 the actin cytoskeleton (4). These integrin-associated proteins include focal adhesion kinase 78 (FAK), Src family kinases and scaffolding proteins, such as paxillin and vinculin (15, 27). The 79 importance of these molecules has been underscored by the results of gene knockout and 80 knockdown experiments (12, 22, 42). The activated signaling molecules play crucial roles in 81 regulating multiple events, including cell adhesion and cell migration. Like cell-matrix adhesions, 82 cell-cell adhesions are intimately associated both physically and functionally with the actin 83 cytoskeleton. Cadherins, which are cell-cell adhesion receptors, associate with the actin 84 cytoskeleton with β-catenin and α-catenin. Following cadherin engagement, RhoGTPases are 85 recruited, activated and regulate the actin cytoskeleton necessary for the formation of stable 86 cell-cell adhesions (44). Formation of cell-cell adhesions requires coordination between 87 assembly and disassembly of cell-matrix adhesions (10, 43). 88 Wtip belongs to a subset of LIM-domain containing proteins that include the prototypic members 89 zyxin, Ajuba, and lipoma-preferred partner (LPP) (18, 30, 38, 45), all of which localize to focal 90 adhesions and cell-cell adhesions. All members of this family contain two distinct regions: a C- 91 terminal domain containing three LIM protein-protein interaction motifs and a proline-rich N- 92 terminal domain containing one or two nuclear export sequences (5). Although we had localized 93 WTIP to cell-cell contacts and regions of active actin dynamics in podocytes, the functional 94 impact of WTIP on the assembly of cell-matrix and cell-cell contacts has been unclear. Using 95 gain of function and RNA interference (RNAi)-mediated gene knockdown in mouse podocytes, 96 we examined the roles of Wtip in actin dynamics, RhoA GTPase activity and podocyte cell 97 contact formation. We found Wtip targets to focal adhesions in adherent but isolated podocytes 98 and then shifts to podocyte adherens junctions after cells make homotypic contacts, a process 99 dependent on RhoA-regulated F-actin dynamics. 4 100 EXPERIMENTAL PROCEDURES 101 Antibodies and plasmids. An affinity purified anti-WTIP antibody was generated and 102 characterized as described previously (20). Other antibodies used in this study included: anti-α- 103 tubulin, anti-vinculin, and anti-pan-cadherin (Sigma Aldrich, St. Louis, MO); anti-paxillin, anti-α- 104 catenin, anti-β-catenin (BD Transduction, San Diego, CA); anti-phosphotyrosine (PY99), anti- 105 myc (Upstate Biotechnology); anti-FAK (Biosource, Camarillo, CA); anti-Rho-GDI (Santa Cruz 106 Biotechnology, Santa Cruz, CA); anti-GFP (monoclonal and polyclonal; Clontech, Mountain 107 View, CA); and anti-ZO-1 (Chemicon International, Temecula, CA). For visualization of F-actin, 108 rhodamine-phalloidin was purchased from Molecular Probes (Carlsbad, CA). The expression 109 vectors, pcDNA3-EGFP-RhoAQ63L (Addgene plasmid 12968) and pcDNA3-EGFP-RhoAT19N 110 (Addgene plasmid 12967), were purchased from Addgene (Cambridge, MA). The plasmid, pT- 111 Adv Rho guanine nucleotide exchange factor (GEF) 12 (Arhgef12) (mLARG) was kindly 112 provided by Dr. Alexander Belyavsky (Engelhardt Institute of Molecular Biology, Russian 113 Academy of Sciences, Moscow, Russia). The N-terminal coding sequence (aa 1-415, containing 114 the PDZ domain) was cloned into pEGFPN2 (Clontech) to produce the expression construct, 115 NT-Arhgef12-GFP. The expression plasmid, myc-WTIP has been previously described (38) 116 Cell culture and cell lines. A conditionally immortalized podocyte cell line MPC was a generous 117 gift of Dr. Peter Mundel (Massachusetts General Hospital, Boston, MA) (23). Cells were 118 maintained in RPMI 1640 medium (Cambrex, Walkersville, MD) supplemented with 10% fetal 119 bovine serum (FBS), 100 U/ml penicillin, and 100 mg/ml streptomycin. Under permissive 120 conditions, podocytes were maintained in 5% CO2 and at 33°C in culture medium supplemented 121 with 10 U/ml mouse recombinant -interferon (Sigma Chemical, St. Louis, MO) to enhance the 122 expression of the SV40 Large T-antigen. To induce differentiation, we plated podocytes on type 123 I collagen in 5% CO2 and 37°C without -interferon (non-permissive conditions) for at least 10 124 days. Podocytes (between passages 10 and 25) used in these studies expressed the 5 125 transcription factor, WT1. Before experiments, expression of the podocyte differentiation marker, 126 synaptopodin, was confirmed by immunofluorescence analysis in a parallel well of podocytes. 127 Unless otherwise indicated, all experiments were carried out in differentiated podocytes. Mouse 128 podocytes were transfected with the indicated expression vectors using Fugene 6 reagent 129 (Roche Diagnostics Corporation, Chicago, IL) following the manufacturer’s protocol. Podocyte 130 clones transfected with pEGFP-WTIP (see below) were selected in G418 (200 μg/ml) and GFP- 131 WTIP expression was documented by western blotting and fluorescence microscopy. 132 Conditionally immortalized mouse podocytes, stably expressing either a control vector (shEMP) 133 or mouse shWtip were generated as previously described (20). pLKO.1-TRCWTIP1 targets 134 mouse Wtip [NM_207212] nt 1471-1491 (TRCN0000095769): 5’- 135 CCGGCCCGCAACAAAGAAGC GATTTCTCGAGAAATCGCTTCTTTGTTGCGGGTTTTTG-3’; 136 or pLKO.1-TRC WTIP2 targets mouse Wtip [NM_207212] nt 766-786 (TRCN0000095770):5’- 137 CCGGCGCGAGACTACT TTGGCATTTCTCGAGAAATGCCAAAGTAGTCTCGCGTTTTTG-3’. 138 Human podocytes stably expressing tetracycline (TCN)-inducible human WTIP epitope-tagged 139 with V5 (GEC-WTIP-V5) were generated using a ViraPower T-Rex lentiviral expression system 140 and Gateway Technology vectors as previously described (20), according to the manufacturer's 141 protocols (Invitrogen). 142 Transient cell transfection. Mouse podocytes were transiently transfected with pcDNA3-EGFP- 143 RhoAQ63L or pcDNA3-EGFP-RhoAT19N using Fugene 6 reagent (Roche) using the 144 manufacturer’s protocol. After 48 to 72 hr, cells expressing the constructs were identified using 145 fluorescence microscopy. To assess the interaction between Rho guanine nucleotide exchange 146 factor 12 (ARHGEF12 or LARG) and WTIP, COS cells (American Type Culture Collection 147 [ATCC], Manassas, VA) or 293 FT cells (Invitrogen) were transfected with the indicated 148 constructs and processed for immunoprecipitation or immunofluorescence microscopy 48 to 72 149 hr later. 6 150 RNA Isolation and RT-PCR. Total RNA was prepared from undifferentiated control and knock 151 down cell lines, as indicated, using the RNeasy Mini Kit (Qiagen, Valencia, CA). On-column 152 DNAse digestion was performed according to the manufacturer’s protocol. Briefly, 1 μg of total 153 RNA was reverse transcribed using random hexamers and SuperScript III First-Strand 154 Synthesis Super Mix (Invitrogen, Carlsbad, CA). RNA was incubated with annealing buffer and 155 random hexamers at 65oC for 5 min, chilled and incubated with First-Strand Reaction Mix and 156 SuperScript III/ RNaseOUT Enzyme Mix for 10 min at room temperature, followed by 50 min at 157 50oC. The reaction was terminated by heating at 85oC for 5 min. Sample cDNA (2 μl) was used 158 to perform semi-quantitative PCR for Wtip using the GC-RICH PCR System (Roche) under the 159 following conditions: 95oC for 3 min; 95oC for 30 sec, 59oC for 30 sec, 72oC for 1 min (23 160 cycles); 72oC for 5 min, 4oC hold. PCR products were visualized in 1% TBE agarose gels. 161 Primer pairs for Wtip were: Forward 5’-GAGCCTGCCCAGTTCCCTTCC-3’ and Reverse 5’- 162 AGCAGCGGAAGCAGCCTGGGTGGTAG-3’. To amplify Limd1 mRNA, sample cDNA (2.0 μl) 163 was annealed at 60oC with the following primer pairs: Forward 5’- 164 ACCCCACCCAGCATTGAAGAACAT-3’ and Reverse 5’–GGCCAAAGGATCCCAACAGAAGG- 165 3’. To amplify Gapdh mRNA (as a loading control), sample cDNA (1.2 μl) was annealed at 57oC 166 with the following primer pairs: Forward 5’-GGAGCCAAACGGGTCATC-3’ and Reverse 5’– 167 TGTTGCTGTAGCCGTATTCAT-3’. To assess podocyte Arhgef12 message expression, cDNA 168 (2 μl) was used for PCR with HotStarTaq (Qiagen) as follows: 95oC for 15min, 95oC for 30 sec, 169 touchdown annealing (30 sec) from 72oC to 57.5oC and extension at 72oC for 1 min (24 cycles), 170 followed by annealing at 58oC and amplification at 72oC for 1 min (28 cycles). Primer pairs for 171 Arhgef12 PDZ N-terminal were : Forward 5’ TCAAAGAAGATGGAGCAGCCATGC-3’ and 172 Reverse 5’-TCTTTGGGTAGCCGTTCGGTTGTA-3’ Primer pairs for the internal Arhgef12 173 coding sequence were: Forward 5’-AACCAACCTTTCGCCCTGGAAATC-3’ and Reverse 5’- 174 TTGAGATTGGAGGTGTCAAGGCGA-3’. 7 175 Recombinant Adenovirus Generation and Infection. Using PCR, we constructed a GFP-WTIP 176 expression plasmid by cloning the human WTIP coding domain cDNA into pEGFP-C2 (BD 177 Biosciences, Palo Alto, CA). pEGFP-WTIP sequence fidelity and reading frame was confirmed 178 by sequencing. The GFP-WTIP fusion gene was amplified by PCR from pEGFP-WTIP and 179 subcloned into pShuttle-CMV, an AdEasy transfer plasmid for recombinant adenovirus 180 construction. Recombinant transfer vector was linearized and cotransformed with pAdEasy-1 181 DNA into BJ5183 according to the manufacturer's instructions. Bacteria were selected on LB 182 plates containing kanamycin. Plasmids were amplified, purified (Qiagen, Valencia, CA), 183 linearized, and transfected into 293 cells (ATCC) for viral particle generation. Recombinant viral 184 particles were then amplified and purified using the Adeno-X virus purification kit (BD 185 Biosciences) and titered. Infecting podocytes with 200–300 plaque-forming units/cell was 186 sufficient to achieve uniform WTIP expression. 187 Immunofluorescence microscopy and quantification. Cells, cultured on sterile glass coverslips 188 (collagen type I-coated for podocytes), were washed in Dulbecco's PBS, fixed in 189 paraformaldehyde (4%, 10 min at room temperature) and permeabilized with 0.2% Triton X-100 190 in Dulbecco's PBS for 5 min on ice. After blocking in 10% goat serum with 2% BSA and 0.2% 191 fish gelatin, cells were incubated with primary antibodies in PBS either at 37oC for an hour in 192 humidified chamber or at 4oC overnight. Subsequently, coverslips were washed and incubated 193 with secondary antibody at dilutions ranging from 1:200 to 1:300 for 1.5 hr at room temperature. 194 Secondary antibodies included fluorescein isothiocyanate-conjugated horse anti-mouse or 195 Texas Red-conjugated goat anti-rabbit antibodies (Vector Laboratories, Burlingame, CA). 196 Coverslips were mounted in anti-fade, aqueous medium containing 4',6 diamidino-2- 197 phenylindole (Vectashield with DAPI; Vector Laboratories) on standard glass slides. For 198 visualization of F-actin, rhodamine-phalloidin was used following manufacturer’s protocol 199 (Molecular Probes). Antibody staining was visualized using a Nikon epifluorescence E600 200 microscope, and photographs were taken with a SPOT Digital System camera model 2.3.0. 8 201 Confocal images were obtained with a Leica TCS SP2 Confocal system. Digital images were 202 processed and grouped using Adobe Photoshop v6.0 (Adobe Systems Inc., San Jose, CA). 203 Leica Quantify software was used to measure the lengths of the focal adhesions. For each 204 experimental condition, the lengths (in pixels) of focal adhesions from 150 cells were measured. 205 The average length was determined and then used to generate a normalized value of mean 206 pixel intensity for focal adhesions. Data are means ± S.E. Unpaired t-tests were conducted to 207 determine significance (asterisk; P < 0.05). 208 To quantify adherens junction assembly, we used published definitions of sequential stages in 209 cell–cell adhesion, which characterize the transitions in cadherin and actin localization as 210 adherens junctions mature (1). Image J software was used to measure the mean pixel intensity 211 of cadherin clusters [stage 1 junctions (1)] in forming junctions, and colocalization of cadherin at 212 actin tips [stage 2 junctions (1)] was quantified as yellow pixel intensity from cadherin [FTIC] and 213 rhodamine actin overlays. For each stage of cell-cell adhesion, a fixed region of interest was 214 used to measure the mean pixel intensity from 100 different cells. The area of the region of 215 interest was determined and then used to generate a normalized value of mean pixel intensity 216 for cadherin clustering and colocalization with actin. Data are means ± S.E. Unpaired t-tests 217 were conducted to determine significance (asterisk; P < 0.05). 218 Time-lapse imaging of live cells and F-actin quantification. For visualizing the EGFP-actin in 219 living cells, 24 hr after the control and Wtip knockdown cells were plated, pEGFP-actin was 220 transiently transfected using Fugene6 (Roche). After incubation for 48 hr, cells were observed 221 under the indicated conditions using live cell imaging parameters on the Leica TCS SP2 222 Confocal system. ImageJ software was used to create a ZProjection stack of the time-lapse 223 images for GFP-actin dynamics. Mean actin intensity was determined using the line scan 224 measure function across the nucleus of 20 individual cells in 4 separate experiments. Data are 225 means ± S.E. Unpaired t-tests were conducted to determine significance (asterisk; P < 0.05). 9 226 For F-actin quantification from static images, the ImageJ line scan function was also used as 227 described. 228 Coprecipitation and immunoblotting. Proteins were extracted from transfected and stable cells 229 using immunoprecipitation (IP) lysis buffer containing 1% Triton-X-100, 150mM NaCl, 10mM 230 Tris HCl, 0.5% deoxycholate, 1mM sodium orthovanadate, along with protease inhibitors and 231 analyzed by immunoprecipitation and immunoblotting as we have previously described (31, 38). 232 Following centrifugation to remove debris, supernatants were matched for protein, precleared 233 with protein G-Sepharose GammaBind beads, and incubated overnight at 4°C with primary 234 antibody. The following day, 50 µl of GammaBind beads were added on the following day and 235 incubated for 1 hr. Control experiments were done in parallel at the same time using appropriate 236 non immune IgG. For GFP-tagged protein only, GFP was expressed and precipitated to confirm 237 specificity. Beads were collected by low speed centrifugation in microcentrifuge tubes for 2-3 238 minutes and washed three times using IP lysis buffer. Bound proteins were released by boiling 239 in 2X SDS sample buffer for 5 min. Eluted proteins were separated by 4-20% SDS-PAGE, 240 transferred to Immobilon (Millipore Corp., Billerica, MA) membranes, and analyzed by 241 immunoblotting. Bound antibody was detected by chemiluminescence (Western Lightning; 242 PerkinElmer Life Sciences). 243 RhoA activity assay. RhoA activity was determined using a configuration-specific monoclonal 244 antibody based RhoA Activation Assay Kit (New East Biosciences, Malvern, PA) following the 245 manufacturer’s protocols. Briefly, GEC-WTIP-V5 cells were grown to approximately 80-90% 246 confluence and then stimulated in the presence or absence TCN. Culture media was aspirated 247 and washed twice with ice-cold PBS. One ml of ice-cold 1X Assay/lysis buffer was added to the 248 cells and placed on ice for 10-20 min. Cells were scraped and collected and lysates were 249 cleared by centrifugation for 10 min (12,000xg at 4oC) and placed on ice. Aliquots of 0.5-1.0 ml 250 of cell lysates were adjusted to 1ml with 1X Assay/lysis buffer. One μl of anti-active RhoA 10 251 monoclonal antibody was added to each sample, followed by 20 μl of resuspended protein A/G 252 agarose bead slurry. Samples were incubated at 4oC for 1 hr with gentle agitation. Beads were 253 pelleted by centrifugation for 1 min at 5,000xg. Supernatant was discarded and the beads were 254 washed three times with 0.5 ml of 1 X assay/lysis buffer, centrifuging and aspirating the 255 supernatant each time. After the last wash, the beads were pelleted and supernatant was 256 removed. Beads were resuspended in 20 μl of 2X reducing SDS-PAGE sample buffer. Each 257 sample was boiled for 5 min and centrifuged for 10 sec at 5,000xg. 258 Cell surface biotinylation assay. Cell surface proteins were biotinylated by incubating the cells 259 with 1.5mg/ml sulfo-NHS-SS-biotin (Thermo Scientific, Rockford, IL)) for 1 hr at 4oC and free 260 biotin was quenched with a blocking solution (50nM NH4Cl in PBS containing 1mM MgCl2 and 261 0.1mM CaCl2). Cells were then either directly extracted in a RIPA buffer, or stripped to remove 262 the extracellular bound biotin with 50 mM glutathione, 75 mM MaCl2, 75 mM NaOH, and 2% 263 bovine serum albumin, at 4oC, and RIPA extracted. Cell extracts were centrifuged and 264 incubated with streptavidin magnetic beads (Dynal, Olson, Norway) to collect biotinylated 265 proteins. Extracted proteins were then separated by SDS-PAGE and analyzed by 266 immunoblotting using antibodies against pan-cadherin, β-catenin, and α-catenin. Total cell 267 lysates were analyzed by immunoblotting to determine the expression levels of these proteins in 268 podocytes expressing the control and Wtip shRNA vectors. 269 Statistical Analysis. The data from all of the experimental groups were expressed as the means 270 ± S.E. An unpaired Student's t-test was used to compare differences between control and 271 experimental groups. Statistical significance was defined as p < 0.05. 272 11 273 RESULTS 274 Endogenous Wtip localized to focal adhesions and cell-cell adhesions. We had previously 275 shown that ectopically expressed WTIP localizes with cell-cell and cell matrix contacts. To 276 examine localization of endogenous Wtip in mouse podocytes, we used an affinity-purified 277 antibody, which we have characterized (20). As shown in Fig 1A, Wtip colocalized with vinculin 278 and paxillin at focal adhesions in cultured, differentiated podocytes prior to the establishment of 279 cell-cell contacts. After cell contacts were established, Wtip colocalized with both β-catenin and 280 cadherin, detected with a pan-cadherin antibody, at cell-cell contact sites (Fig 1B). In addition, a 281 pool of endogenous Wtip localized to the nucleus in some cells, which is consistent with our 282 previous studies that demonstrated, via cellular fractionation, that ectopically expressed human 283 WTIP was dynamically regulated and shifted between plasma membrane, cytosol and the 284 nucleus (20) in response to environmental cues. These results indicate that Wtip localized 285 specifically at cell-matrix and cell-cell adhesion sites and suggested dynamic remodeling of cell- 286 cell junctions regulated the intracellular localization of Wtip, consistent with a role for Wtip in 287 plasticity of podocyte phenotype. In addition, intracellular localization of ectopically expressed 288 WTIP recapitulated patterns of the endogenous protein. 289 Redistribution of WTIP to focal adhesions upon disruption of adherens junction in low 290 calcium media. Since Wtip localization was regulated by the state of cell-cell contact, we next 291 studied the effect of dynamic remodeling of adherens junctions on Wtip localization using a 292 calcium switch assay in podocytes expressing GFP-WTIP delivered by recombinant adenovirus. 293 WTIP was localized to cell-cell contacts in presence of normal calcium (NC, 1.8 mM; Fig 1C, left 294 panel). After the cells were incubated in low calcium (LC, 5 μM) media, WTIP localized at focal 295 adhesion-like structures as early as 2 hr (not shown) and persisted there for 6 hr (Fig 1C, center 296 panel). Furthermore, when podocytes were re-incubated in NC medium, WTIP again targeted to 297 cell-cell contacts (Fig 1C, right panel). Previous studies have shown that the vinculin 12 298 redistributes similarly in a calcium switch assay (28). Therefore to confirm that WTIP localized to 299 focal adhesions in the absence of stable adherens junctions, we stained podocytes in LC 300 medium with antibodies that recognize the focal adhesion markers, phosphotyrosine (P- 301 tyrosine) and vinculin. GFP-WTIP was colocalized with both P-tyrosine and vinculin at the focal 302 adhesions (Fig 1D). 303 Depletion of Wtip abrogated the assembly of actin stress fibers and maturation of focal 304 adhesions. We next examined the effect of Wtip depletion on focal adhesion complex formation 305 in mouse podocytes with stable knockdown of Wtip (shWtip) and cells expressing a control 306 construct (shEMP), which have been previously characterized (20). Staining with rhodamine- 307 phalloidin revealed that majority of Wtip knockdown cells failed to elaborate actin stress fibers 308 (Fig 2A). Because focal adhesions are required for the formation of actin stress fibers and 309 because Wtip was localized at FAs prior to generation of stable adherens junctions, we next 310 examined whether maturation of FAs was altered after Wtip knockdown. Normally focal 311 complexes containing paxillin and FAK are formed at the leading edge of an extended 312 lamellipodial protrusion and cell periphery. These nascent focal complexes then grow to mature 313 focal adhesions as other focal adhesion proteins, such as vinculin, are recruited. To assess the 314 state of focal complex maturation, shEMP and Wtip knockdown cells were fixed and stained for 315 vinculin, paxillin, and tyrosine phosphorylation. Individual vinculin signals in Wtip knockdown 316 cells were significantly smaller at the cell periphery compared to shEMP podocytes, as 317 assessed by quantification of relative mean intensity (Fig 2, panels B and C, P<0.05). 318 Immunostaining for paxillin revealed no significant difference in signal of relative mean intensity 319 between shEMP and Wtip knockdown. However, the localization of paxillin appeared to be more 320 disorganized in Wtip knockdown cells (Fig 2D). Immunostaining for tyrosine phosphorylation 321 (anti-pY99) also revealed a decrease in overall tyrosine phosphorylation in Wtip knockdown 322 compared to shEMP cells, consistent with failure of focal complex maturation into focal 13 323 adhesions (Fig 2E). The knockdown of Wtip was specific as assessed by RT-PCR. ShWtip 324 podocytes did not express Wtip transcripts but mRNA abundance of Limd1, a closely related 325 LIM domain protein family member and Gapdh was similar in shEMP and Wtip knockdown cells 326 by RT-PCR (Fig 2F). In addition, focal contact maturation failure was not caused by Wtip shRNA 327 off-target effects. Expression of the focal adhesion proteins, paxillin, vinculin, and FAK, was 328 equivalent between control and Wtip knockdown cells (Fig 2G). These data suggested 329 recruitment and accumulation of Wtip was not essential for assembly of nascent focal 330 complexes but was necessary for maturation of focal complexes into focal adhesions and actin 331 stress fiber formation in podocytes. 332 Wtip is involved in the formation of cell-cell adhesions. As shown in Fig1B, Wtip also 333 localized to cell-cell adhesion sites after stable cell-cell contacts were formed, suggesting Wtip 334 depletion would cause defects in the formation of adherens junctions. Compared to shEMP 335 cells, Wtip knockdown podocytes displayed a marked inability to form cadherin-based, 336 homotypic cell-cell adhesions (Fig 3A, double arrowheads) and stress fibers (Fig 3A, histogram, 337 P<0.05). Instead of forming adhesions with neighboring attached cells, Wtip knockdown 338 podocytes appeared to extend lamellipodia and filopodia, which extended under or over 339 neighboring cells. Further analysis of adherens junction formation revealed that parallel lines of 340 actin filaments were assembled continuously between neighboring cells in shEMP cells, 341 indicative of proper adherens junction formation (Fig 3B, top). By contrast, actin filaments 342 between neighboring Wtip knockdown cells were disordered and tangled (Fig 3B, bottom). 343 These results suggested that perturbed actin dynamics at cell-cell contact sites in Wtip 344 knockdown podocytes impaired normal adherens junction assembly. To quantitate differences 345 in cell-cell adhesion between Wtip and control shRNA podocytes, we used a previously 346 published method that characterized changes in cadherin and actin cytoskeleton organization 347 (1). Initial junction formation was categorized into two stages: clustering of cadherin puncta 14 348 along the length of the forming contact (stage 1) and maturation of the cadherin puncta into 349 plaques at the edges of the contact at actin tips (stage 2). Based on relative fluorescence 350 intensity, a statistically significant difference between shWtip and shEMP podocytes was 351 identified in formation of both stage 1 (cadherin puncta, Fig 3B, asterisks) and stage 2 352 (colocalization of cadherin at actin tips, Fig 3B, carrots) junction formation in Wtip knockdown 353 cells compared to control cells (Fig 3C, P<0.05). These results suggest that Wtip depletion 354 perturbs actin filaments organization at cell-cell contact sites, preventing normal assembly of 355 cadherin-based adherens junctions between neighboring podocytes. 356 To further examine the effects of Wtip depletion on cell-cell contact formation, we induced 357 formation of cell adhesions in control and Wtip-depleted cells by changing the Ca2+ 358 concentration in the culture medium from low to normal calcium. Cells were fixed and stained 359 with rhodamine-phalloidin and anti-pan-cadherin antibody at 20 minutes and 5 hours after 360 calcium addition, when cell-cell adhesions were initially reforming and were completely 361 assembled, respectively. In shEMP cells, actin filaments longitudinally ramified from cell-cell 362 contacts (Fig 3D and E, top panels). In contrast, cadherin-based cell-cell contacts were 363 infrequent in Wtip-depleted cells (Fig 3D and E, bottom panels) and the tips of F-actin filaments 364 were not anchored by cadherin puncta. These results show that Wtip plays a role in the control 365 of actin filament organization upon cell-cell contact and, therefore, in the formation of cadherin 366 mediated cell-cell adhesions. 367 In shEMP podocytes, cadherin was detected primarily at the cell-cell contacts (Fig 3B, top 368 inlay). In contrast, in Wtip depleted cells, we observed retention of cadherin in intracellular 369 compartments and only weak staining at the plasma membrane (Fig 3B, bottom inlay) so we 370 next analyzed both total and cell surface-biotinylated cadherin. Whole cell lysate protein was 371 precipitated with streptavidin beads and precipitates were immunoblotted with pan-cadherin, α- 372 catenin, and β-catenin antibodies. Cadherin, α-catenin, β-catenin, and RhoGDI abundance in 15 373 the whole cell lysates was similar in both shEMP and Wtip knockdown cells (Fig 3F, WCL). 374 However, levels of cadherin, α-catenin, and β-catenin were decreased the streptavidin- 375 precipitated fraction in Wtip knockdown cells compared to shEMP podocytes (Fig 3F). Wtip 376 appeared necessary for recruitment, assembly or retention of the adherens junction complex in 377 the plasma membrane suggesting a mechanism by which Wtip depletion interferes with 378 formation of stable cell-cell contacts. 379 WTIP coprecipitated with the adherens junction proteins, cadherin, β-catenin, and α- 380 catenin. Using podocytes stably expressing GFP-WTIP, we next tested if WTIP interacts with 381 junctional proteins or simply co-distributes with them. Anti-GFP immunoprecipitates from GFP- 382 WTIP-expressing podocytes were immunoblotted with anti-pan-cadherin antibody (recognizes 383 N-, E-, P-, and R-cadherins) or antibodies against Wtip, ZO-1, α-catenin or β- catenin. Cadherin, 384 α-catenin and β-catenin (Fig 3G, left) specifically coprecipitated with GFP-WTIP, but we were 385 unable to detect substantial amounts of ZO-1 in these immunoprecipitates. No adherens 386 junction proteins coprecipitated with GFP (Fig 3G, right). 387 Wtip depleted cells exhibit aberrant actin cytoskeleton dynamics. F-actin structures were 388 disordered in shWtip podocytes. Since normal actin dynamics are necessary for formation of 389 both adherens junctions and focal adhesion complexes, we hypothesized that Wtip may directly 390 or indirectly regulate F-actin dynamics. Although LIM domain proteins can directly interact with 391 actin, we were unable to show that Wtip and actin physically interacted (Kim and Sedor, 392 unpublished observations). Using time lapse microscopy, we examined the dynamics of actin 393 organization in shWtip and control podocytes transfected with an EGFP-actin expression vector. 394 GFP-labeled actin stress fiber formed and persisted in shEMP cells (Fig 4A, arrows), while actin 395 stress fibers only rarely formed in shWtip cells during the observation period (up to 14 min) (Fig 396 4B, arrow heads). Quantification of mean actin intensity in a Z-axis projection of the image stack 397 was statistically less in shWtip versus shEMP podocytes, consistent with failure to assemble F16 398 actin (Fig 4C, P<0.05). In addition, Wtip knockdown cells exhibited reoccurring clusters of 399 polymerized actin (arrow heads), which was not observed in control cells (arrows), suggesting a 400 global perturbation of actin dynamics. Overall, Wtip knockdown cells had more membrane 401 protrusions and filopodia than control cells. These data suggest that Wtip is not only required for 402 the proper formation of actin stress fibers, but that it also plays a broader role in the regulation 403 of the actin cytoskeleton. 404 WTIP overexpression enhances formation of actin stress fibers. The mammalian Ajuba 405 family LIM proteins, which include Ajuba and Limd1 as well as Wtip, are adaptor proteins within 406 multi-protein complexes that connect cell-cell and cell matrix contact proteins to the 407 cytoskeleton. Given the critical role of actin dynamics in regulating podocyte function and 408 phenotype, we next examined if Wtip influenced F-actin cytoskeleton assembly using rhodamine 409 phalloidin to label actin. Differentiated podocytes express F-actin stress fibers. However, 410 undifferentiated podocytes characteristically lack stress fiber formation. We assayed F-actin 411 stress fiber assembly state in an undifferentiated human podocyte cell line stably transfected 412 with a tetracycline (TCN)-regulated V5-tagged WTIP transgene (GEC-WTIP-V5). Mean actin 413 staining was calculated with the Leica Quantify software analysis program using a single line 414 scan across the diameter of each individual cell (100 cells evaluated in each experiment, n=3 415 separate experiments). Control, undifferentiated podocytes incubated in the presence or 416 absence of TCN demonstrated no difference in actin stress fiber assembly, and mean intensity 417 of actin fluorescence was similar in TCN-treated and untreated cells (Fig 5A). When 418 undifferentiated GEC-WTIP-V5 cells were incubated with TCN to induce WTIP-V5 419 overexpression, F-actin stress fibers robustly assembled (Fig. 5B) compared to untreated GEC- 420 WTIP-V5. The bar graphs depict quantification of the actin stress fiber formation in GEC-WTIP- 421 V5 with or without incubation with TCN (Fig 5B; p<0.01, TCN-treated GEC-WTIP-V5 compared 17 422 to untreated GEC-WTIP-V5 cells). In the absence of TCN, podocytes did not express WTIP-V5 423 and no stress fibers were observed (Fig 5C). 424 WTIP stress fiber formation was regulated through RhoA GTPase dependent pathways. 425 Downstream effectors of the RhoA GTPase include RhoA-associated coiled-coil kinase (ROCK), 426 a kinase recruited to the plasma membrane by active RhoA and required for stress fiber 427 formation (2). To determine whether F-actin stress fiber formation was under the regulation of 428 the traditional RhoA effector pathways, undifferentiated GEC-WTIP-V5 podocytes were pre- 429 incubated with a cell permeable C3 toxin, a known inhibitor of RhoA, and then stimulated with 430 tetracycline to induce WTIP-V5 expression. C3 toxin prevented actin stress fiber formation in 431 podocytes overexpressing WTIP-V5 compared to cells not preincubated with C3 toxin (Fig 6A, 432 middle panel). In addition, the activation of ROCK is known to modulate the organization of the 433 actin-based cytoskeletal systems, including the formation of stress fibers (34). GEC-WTIP-V5 434 treated with a ROCK inhibitor, Y27632, also failed to form actin stress fibers (Fig 6A, right 435 panel). Finally, RhoA activity was assessed by immunoblotting using a configuration-specific 436 monoclonal antibody-based RhoA activity assay in the GEC-WTIP-V5 in the presence or 437 absence of TCN. In GEC-WTIP-V5 stimulated with TCN, RhoA activity was increased compared 438 to control podocytes (Fig 6B). These data link WTIP-V5 induction with the activation of the RhoA 439 pathway and stress fiber assembly, identifying WTIP as a molecular player upstream of the Rho 440 signaling pathway. 441 We next determined if Wtip promoted stress fiber formation by adding monomeric actin to 442 barbed ends of F-actin. GEC-WTIP-G5 were either pre-incubated with low dose cytochalasin D 443 (CD 10 nM) for 1 hr or were untreated, then exposed to TCN for 24 hr and fixed and processed 444 for WTIP-V5 expression and F-actin formation. This concentration of CD inhibits membrane 445 ruffling and prevents F-actin elongation by binding to the barbed end of the filament and 446 preventing monomeric actin addition (8). Low dose CD pre-treatment dramatically decreased F- 18 447 actin stress fiber formation compared to untreated control after WTIP induction (Fig 6C). As a 448 result, we believe that WTIP may promote addition of monomeric actin to the barbed ends of 449 growing F-actin filaments, a pathway regulated through by RhoA. 450 Wtip and RhoA expression in shWtip podocytes reestablished F-actin stress fibers. Wtip 451 knockdown cells showed inefficient formation of focal adhesions and reduced formation of actin 452 stress fibers. To assess if altered actin dynamics in shWtip podocytes was specific to Wtip 453 knockdown or resulted from off-target effects, we next determined if transient overexpression of 454 EGFP-WTIP in shWtip cells rescued stress fiber formation. The human WTIP nucleotide 455 sequence differs at 2 bases from the murine Wtip sequence, making it resistant to a murine 456 Wtip shRNA. Transient EGFP-WTIP transfection into shWtip podocytes restored stress fiber 457 formation comparable to control cells (Fig 7A), suggesting that loss of stress fibers was a result 458 of Wtip knockdown not an shRNA off target effect. Since our previous experiments 459 demonstrated Wtip is an upstream regulator of RhoA signaling and because RhoA activity is 460 required for both focal adhesion and stress fiber formation (3), we next overexpressed 461 constitutively active EGFP-RhoAQ63L and dominant negative EGFP- RhoAT19N in Wtip 462 knockdown podocytes. When EGFP- RhoAQ63L was expressed in Wtip depleted cells, actin 463 stress fibers were formed and perturbations of actin polymerization caused by Wtip depletion 464 were suppressed (Fig 7B, top). These results are consistent with the premise that Wtip 465 regulates directly or indirectly RhoA activity. In contrast, EGFP- RhoAT19N overexpression had 466 no effect on stress fiber formation (Fig 7B, bottom) and demonstrated that RhoA activity was 467 required. Rescue of stress fiber assembly with the overexpression of constitutively active RhoA 468 in Wtip knockdown cells suggested that, even in the absence of Wtip, overexpressed RhoA 469 likely drives the maturation of focal adhesions from focal complexes. Even though Wtip was not 470 required for the assembly of actin stress fibers and/or mature focal adhesions, Wtip may be 471 involved in coordinating proper regional activation of RhoA at focal complexes. Taken together, 19 472 our data suggest that Wtip localized at cell-matrix and cell-cell contact sites and plays a crucial 473 role in Rho-GTPase-mediated actin remodeling, which is essential for proper cell-matrix and 474 cell-cell contact formation. 475 Wtip Interacted with the N-terminal PDZ domain of Arhgef12. Guanine nucleotide exchange 476 factors (GEFs) increase RhoA activity and play a key role in actin cytoskeleton formation. Based 477 on the previous results, we hypothesized that Wtip interacted with a GEF to regulate regional 478 actin dynamics and appropriate assembly of both focal adhesions and podocyte adherens 479 junctions. The Wtip sequence has a C-terminal PDZ-binding domain, VTEL, which is highly 480 similar to the canonical PDZ binding domain in PlexinB1, VTDL. We identified a family of 481 RhoGEFs (PDZ-RhoGEF and leukemia-associated RhoGEF [LARG or ARHGEF12]), which 482 contain PDZ domains and mediate targeted RhoA activation. We focused on Arhgef12 as a 483 Wtip interaction partner, since its human orthologue was recently reported to be enriched in a 484 glomerular expression library prepared from human kidney (21). Both the human and mouse 485 Arhgef12 proteins contain the same functional domains, including the Dlg and ZO-1/2 PDZ 486 domains (47). Immunofluorescence analysis (Fig 8A) and coprecipitation experiments (Fig 8C) 487 using over-expressed myc-WTIP and NT-Arhgef-GFP showed that myc-WTIP interacts with the 488 PDZ containing amino terminal region of Arhgef12. Endogenous Arhgef 12 message was 489 identified by reverse transcription–PCR in mouse podocytes using two different primer sets (Fig 490 8B). 491 20 492 DISCUSSION 493 Structure and dynamics of the actin cytoskeleton are important for regulation of cell-matrix and 494 cell-cell adhesions and for cell migration. In this study, we showed Wtip was localized to focal 495 adhesion and cell-cell contact sites similar to other LIM-domain family members including zyxin, 496 Ajuba, and LPP (11, 17, 40). Interestingly, Wtip localization to the cell-cell contact sites was 497 associated with proper cadherin targeting and actin assembly at the junction (Fig 1). Similarly, 498 Wtip accumulated at cell-matrix adhesions sites where actin was organized into stress fibers as 499 the focal adhesion matures (Fig 1 and 2). These results suggest that Wtip is localized to the 500 cell-matrix and cell-cell contact sites when and where actin cytoskeleton is actively reorganized. 501 In this work, we have focused on the function of Wtip outside the podocyte nucleus. The 502 dynamic distribution of Wtip at cell adhesion sites, the focal adhesions and adherens junctions, 503 in addition to its association with both the focal adhesion and the adherens junction protein 504 complex suggest the importance of Wtip in the stability and/or maintenance of cell adhesions. 505 Consistent with its localization, depletion of Wtip from podocytes impaired not only stress fiber 506 assembly and focal adhesion formation, but also actin reorganization at cell-cell adhesion sites 507 (Fig 2A). However, total protein expression of focal adhesion proteins FAK, paxillin, and vinculin 508 remained unchanged (Fig 2G). Loss of FAK and paxillin expression in HeLa cells also 509 abrogated efficient N-cadherin mediated cell-cell adhesion (33), which provided evidence for 510 communication between integrin and cadherin systems. However paxillin and FAK localized to 511 focal adhesion structures exclusively, whereas Wtip was localized to both focal adhesion and 512 cell-cell adhesions, suggesting that Wtip is more directly involved in integrin-cadherin 513 intercommunication. At the cell-cell contact sites, Wtip may participate in the cadherin-mediated 514 signaling pathway to regulate actin organization essential for the correct formation of cell-cell 515 adhesions. 21 516 In Wtip depleted cells, formation of the focal complex-an initial step of focal adhesion formation- 517 appeared normal, as shown by the paxillin immunostaining (Fig 2D). Therefore, Wtip is 518 dispensable for formation of the focal complex, although it is indispensible for the maturation of 519 focal complex to focal adhesion (Fig 2C and E). Maturation of focal adhesions is essential for 520 stress fiber formation and stable cell-matrix adhesion (6). Thus, we speculate that at the cell- 521 matrix adhesion sites, Wtip participates in the integrin-mediated signaling pathways. 522 Coordinated sequential activation and inactivation of Rac1 and RhoA are a prerequisite for the 523 formation of stress fibers and mature focal adhesions (36). Our study showed that exogenous 524 expression of constitutively active RhoA in shWtip cells rescues stress fiber formation, which 525 suggests that failure of spatial or temporal regulation of RhoA activity is a cause for impaired 526 actin dynamics in Wtip-depleted cells. 527 In addition, time-lapse observations of actin dynamics revealed loss of stress fibers caused by 528 Wtip depletion was associated with abnormal actin polymerization events even in the absence 529 of specific stimuli. Because sustained Rac activation downregulates Rho activity in fibroblasts 530 (32), and because a Rho inhibitor induces a phenotype suggestive of activation of Rac1 in 531 fibroblasts (26), Wtip might contribute to RhoA activation through downregulation of Rac1 532 activity. Transfection of a constitutively active Rac1 in podocytes induced bursts of actin 533 polymerization that resembled those induced by Wtip depletion (Kim and Sedor, unpublished 534 results). However, it did not perturb stress fibers, suggesting high activity of Rac1 is not 535 sufficient to suppress stress fiber formation in podocytes. By contrast, expression of 536 constitutively active RhoA in Wtip-depleted cells not only restored stress fiber formation, but 537 also repressed abnormal burst of actin polymerization (Fig 7B). RhoA may directly or indirectly 538 inactivate Rac1 in Wtip depleted cells. 539 In conclusion, our results show that Wtip regulates the stable formation of cell adhesions to both 540 extracellular matrix and neighboring cells and suggest that Wtip is necessary for normal 22 541 glomerular filtration barrier function. This process may be mediated by spatio-temporal 542 regulation of RhoA activity through appropriate targeting of Arhgef12 by Wtip. Both animal and 543 cell culture models have demonstrated that regulated Rho family GTPase activity is critical for 544 normal glomerular filtration barrier function and podocyte contact formation. Mice lacking a 545 member of the Rho guanine nucleotide dissociation inhibitor family, RhoGDIα, develop 546 nephrotic syndrome (39). In vitro, small GTPase activity regulated the integrity of cell-cell 547 contacts (9) and the balance of small GTPase activity is critical for normal podocyte process 548 formation, a cell culture phenotype suggestive of foot process retraction (46). Complement- 549 dependent injury upregulated RhoA activity and concomitantly reduced Rac and Cdc42 activity 550 causing foot process retraction (17). Finally, insulin signaling through the insulin receptor rapidly 551 reorganizes the actin cytoskeleton in normal podocytes by regulation of small GTPase activity 552 and loss of podocyte foot processes with actin rearrangement was an early abnormality 553 identified in podocyte-specific, insulin receptor knock-out mice (41). Given the importance of 554 spatial control of Rho family GTPase activity in appropriately regulating cellular function and 555 phenotype (29), scaffolding molecules like Wtip may play a critical role. Further studies of the 556 precise signaling pathway from Wtip to Rho GTPases and, thus actin dynamics, may improve 557 understanding of mechanisms by which Rho family GTPases regulate glomerular filtration 558 barrier function and identify novel targets for therapy. 559 23 560 ACKNOWLEDGEMENTS 561 We thank Dr. Gary Bokoch for the pcDNA3-EGFP-RhoA-Q63L (Addgene plasmid 12968) and 562 pcDNA3-EGFP-RhoA-T19N (Addgene plasmid 12967) constructs. The plasmid, pT-Adv Rho 563 guanine nucleotide exchange factor (GEF) 12 (Arhgef12 or Larg) was kindly provided by Dr. 564 Alexander Belyavsky. 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(B) Immunostaining for adherens 697 junction proteins with anti-β-catenin and anti-pan-cadherin (TRITC). Nuclei were labeled with 698 CY5-TOPRO-3. (C) A calcium switch assay demonstrated GFP-WTIP localization at cell-cell 699 junctions in medium with normal calcium (NC) concentration (1.8 mM). With disruption of 700 adhesion junctions in low calcium (LC) medium (5 μM), GFP-WTIP localized in patches 701 resembling focal adhesions (middle panel). GFP-WTIP retargeted to adherens junctions (left 702 panel). (D) In LC medium, GFP-WTIP colocalized with the focal adhesion markers, 703 phosphotyrosine and vinculin. Scale bars: 20μm. 704 Figure 2: Wtip knock down impaired stress fiber formation and dysregulated focal 705 adhesion maturation. (A) Actin stress fibers were visualized by rhodamine-phalloidin staining 706 in shEMP controls (upper panels) and in shWtip (lower panels) and co-stained with anti-WTIP 707 (FITC). (B) Focal adhesions were immunostained with anti-vinculin (TRITC) in shEMP and 708 shWtip. (C) Focal adhesion maturation was assessed by anti-vinculin immunostaining in shEMP 709 and shWtip cells. Quantification of focal adhesion size was determined as described in Materials 710 and Methods. The bar graph shows mean relative intensity units for vinculin (right). (D) shEMP 711 and shWtip cells were immunostained with anti-paxillin, a marker of focal contacts. The bar 712 graph shows mean relative intensity units for paxillin (right). (E) Phosphotyrosine levels of FAs 713 in shEMP and shWtip cells were assessed by immunostaining with PY99 as an indicator of FA 714 maturation. The bar graph shows mean relative intensity units for phosphotyrosine (right). (F) 715 RT-PCR of shEMP and shWtip cells for Wtip, Limd1 and Gapdh transcripts. (G) Immunoblot 716 analysis of shEMP (control) and shWtip (knockdown) podocytes for Wtip, paxillin, vinculin, FAK, 717 and tubulin. Leica Quantify software was used for quantification. Scale bar: 20μm. 28 718 Figure 3: Knockdown of Wtip affects proper cadherin junction assembly and targeting. 719 shWtip and shEMP cells stained with rhodamine-phalloidin and anti-pan-cadherin (A, B). Nuclei 720 were labeled with CY5-TOPRO-3. Images in panel A show robust cadherin-based cell-cell 721 contacts in shEMP podocytes (arrowhead) but not in shWtip cells (double arrowheads). The 722 histograms quantify actin stress fiber abundance as described in the Methods. (C) 723 Quantification of cell-cell adhesion formation in shEMP and Wtip knockdown cells as described 724 in the Methods and the Results. shWtip podocytes 20 min (D) and (E) 5 hr after switching from 725 low to normal calcium. (F) Biotinylation demonstrated decreased plasma membrane localization 726 of adherens junction proteins cadherin, β-catenin, and α-catenin to the membrane in shWtip vs. 727 shEMP podocytes. Immunoblot analysis of whole cell lysates showed equal expression of 728 cadherin, β-catenin, α-catenin and rho-GDI. (G) GFP-WTIP formed a complex with the indicated 729 adherens junction proteins (left panels) but GFP fails to precipitate these proteins (right panels). 730 Scale bar: 10 μm. 731 Figure 4: Wtip knock down affects dynamic actin assembly. (A) Time- lapse images of 732 shEMP and (B) shWtip cells transiently transfected with eGFP-actin (green). Arrows indicate 733 stress fiber formation in shEMP cells, whereas arrow heads indicate actin clusters and the lack 734 of actin stress fiber formation in shWtip cells. (C) Quantification of stress fiber formation in 735 shEMP versus shWtip cells (P<0.05). Scale bars: 20μm. 736 Figure 5: Overexpression of GFP-WTIP enhances formation of actin stress fibers. (A) F- 737 actin assembly compared in control podocytes with and without tetracycline (TCN). Bar graph 738 demonstrates mean actin staining using a single line scan across the nuclei of each (100 cells, 739 n=3 experiments) (B) F-actin assembly in GEC-WTIP-V5 +/- TCN and quantified in the bar 740 graph (p<0.01, GEC-WTIP-V5 with TCN vs. no TCN). (C) GEC-WTIP-V5 +/- TCN assessed F- 741 actin using rhodamine-phalloidin (left panels) and WTIP-V5 expression (FITC, middle panels). 742 Merged images in right panels. Scale bars: 20 μm. 29 743 Figure 6: WTIP stress fiber formation was regulated through RhoA-dependent pathways. 744 (A) GEC-WTIP-V5 were pre-incubated with either a cell-permeable RhoA inhibitor, C3 toxin 745 (upper middle) or a Rho kinase inhibitor, Y27632 (upper right), or were untreated control for 3 hr 746 followed by incubation with TCN for 24 hr (B) RhoA activation assay in GEC-WTIP-V5 cells +/- 747 TCN. (C). Low dose cytochalasin D (CD, 10 nM) pre-treatment of GEC-WTIP-V5 for 20 min 748 followed by addition of TCN. Scale bars: 10 μm. 749 Figure 7: Overexpression of GFP-WTIP or constitutively active RhoA rescued actin 750 phenotype. (A) Transient transfection of an eGFP-WTIP expression vector demonstrated 751 comparable actin stress fiber formation using rhodamine phalloidin in shWtip and shEMP 752 podocytes. (B) Transient transfection of EGFP-RhoAQ63L (RhoA-Q, constitutively active) and 753 EGFP- RhoAT19N (RhoA-T, dominant negative) constructs into shWtip cells demonstrated 754 RhoA activity is required for stress fiber formation. Arrows indicate actin stress fiber tips. Nuclei 755 were labeled with CY5-TOPRO-3. 756 Figure 8: Myc-WTIP interacted with the PDZ domain-containing, amino terminal (NT) of 757 the RhoA GEF, Arhgef12. (A) COS7 cells were co-transfected with Myc WTIP and NT- 758 Arhgef12-GFP constructs. Immunofluorescence labeling was done with rabbit polyclonal anti- 759 Myc antibody followed by Alexa Fluor 568®-conjugated anti-rabbit secondary antibody. Myc- 760 WTIP (red) expression co-localizes with Arhgef12 (green) in the merged image. Magnified view 761 of selected areas from upper panels showed co-localization in cell extension. (B) RT-PCR was 762 done in mouse podocytes using two primer sets amplifying different regions of Arhgef12 763 message. PCR products of expected size (412bp and 331bp) were observed for the N-terminal 764 PDZ domain containing and internal coding region of Arhgef12 respectively. (C) 765 Coimmunoprecipitation was done in 293 cells transfected with Myc-WTIP and Arhgef12-GFP. 766 Cell lysates were immunoprecipitated using anti-Myc or anti-GFP antibodies and the 767 immunoprecipitates were examined by western blot using anti-GFP or anti-Myc antibodies 30 768 respectively. Rabbit IgG was used as a control for immunoprecipitation. Input represented 5% of 769 cell lysates used in the co-immunoprecipitation. 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 31 789 790 INTENTIONALLY BLANK 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 32 810 INTENTIONALLY BLANK 811 812 813 814 815 816 817 818 819 820 33 34 C D 35 2 36 2 D 37 2 38 Figure 3 Mean intensity of acn staining (RIU) 160 140 120 100 80 60 * 40 20 0 shEMP 39 shW Figure 3 * < < * C * * shWtip shWtip Stage 1 Stage 2 40 Figure 3 D E 41 Figure 3 F P p M Wti E sh sh G untransfected WCL IB: IP: IgG GFP IB: GFP -WTIP GFP Pan -Cadherin Pan -Cadherin -catenin -catenin -catenin ZO-1 42 transfected Figure 4 A B shWtip C 160 Mean acn intensity (RIU) 140 120 100 80 60 40 * 20 0 shEMP shW 43 Figure 5 44 Figure 6 45 Figure 7 A shWtip B shWtip shWtip 46 Figure 8 A NT-Arhgef12-GFP Merge Myc-WTIP NT-Arhgef12-GFP Merge + + Input + + + + + k :G FP Bl an -R T +R T PC R Myc-WTIP Mouse Podocyte mRNA NT-Arhgef12-GFP WB: Myc 47 + Rb Ig G WB: GFP 412 bp 331 bp bI IP + + IP : :R IP Mouse Podocyte mRNA Input + + IP Bl R PC -R T +R T Myc-WTIP NT-Arhgef12-GFP :M yc C an k B gG Myc-WTIP