Research PSI Mehler reaction is the main alternative photosynthetic electron pathway in Symbiodinium sp., symbiotic dinoflagellates of cnidarians Stephane Roberty1,2, Benjamin Bailleul3, Nicolas Berne3, Fabrice Franck2,4 and Pierre Cardol3,4 1 Laboratoire d’Ecologie Animale et d’Ecotoxicologie, Departement de Biologie, Ecologie et Evolution, Universite de Liege, 11 Allee du 6 Ao^ ut, B-4000 Liege, Belgium; 2Laboratoire de Bioenergetique, Institut de Botanique, Universite de Liege, 27 Bld du Rectorat, B-4000 Liege, Belgium; 3Laboratoire de Genetique et Physiologie des Microalgues, Institut de Botanique, Universite de Liege, 27 Bld du Rectorat, B-4000 Liege, Belgium; 4PhytoSYSTEMS, Universite de Liege, B-4000 Liege, Belgium Summary Authors for correspondence: Pierre Cardol Tel: +32 4 366 38 40 Email: Pierre.Cardol@ulg.ac.be Fabrice Franck Tel: +32 4 366 39 04 Email: F.Franck@ulg.ac.be Received: 6 February 2014 Accepted: 17 May 2014 New Phytologist (2014) 204: 81–91 doi: 10.1111/nph.12903 Key words: chlororespiration, coral bleaching, cyclic electron flow, mitochondrial respiration, oxygen uptake, reef-building corals, Symbiodinium, water-water cycle. Photosynthetic organisms have developed various photoprotective mechanisms to cope with exposure to high light intensities. In photosynthetic dinoflagellates that live in symbiosis with cnidarians, the nature and relative amplitude of these regulatory mechanisms are a matter of debate. In our study, the amplitude of photosynthetic alternative electron flows (AEF) to oxygen (chlororespiration, Mehler reaction), the mitochondrial respiration and the Photosystem I (PSI) cyclic electron flow were investigated in strains belonging to three clades (A1, B1 and F1) of Symbiodinium. Cultured Symbiodinium strains were maintained under identical environmental conditions, and measurements of oxygen evolution, fluorescence emission and absorption changes at specific wavelengths were used to evaluate PSI and PSII electron transfer rates (ETR). A light- and O2-dependent ETR was observed in all strains. This electron transfer chain involves PSII and PSI and is insensitive to inhibitors of mitochondrial activity and carbon fixation. We demonstrate that in all strains, the Mehler reaction responsible for photoreduction of oxygen by the PSI under high light, is the main AEF at the onset and at the steady state of photosynthesis. This sustained photosynthetic AEF under high light intensities acts as a photoprotective mechanism and leads to an increase of the ATP/NADPH ratio. Introduction Coral reefs are among the richest and the most diverse biological ecosystems on earth. The resilience and the ecological success of reef-building corals in tropical oligotrophic waters rely on the symbiotic relationships between corals and photosynthetic dinoflagellates of the genus Symbiodinium (commonly referred to as zooxanthellae). In this mutualistic relationship, the photosynthetic dinoflagellates are located in symbiosomes within the cells of the invertebrate (Wakefield & Kempf, 2001) and translocate a significant portion of their photosynthetic products to their host (c. 70% in the coral Stylophora pistillata) (Tremblay et al., 2012), thus contributing directly to its daily energetic demands (Muscatine, 1990; Tremblay et al., 2012). In return, the host supplies the Symbiodinium cells with growth-limiting nutrients (CO2, nitrogen and phosphate) derived from its waste metabolism (see Yellowlees et al., 2008 for a review). Phylogenetic studies conducted these last two decades have revealed that the genus Symbiodinium is delineated into nine lineages or clades (A to I) (Pochon & Gates, 2010), each comprising multiple phylotypes or species (Lajeunesse et al., 2012; Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust Thornhill et al., 2014). Different Symbiodinium phylotypes can exhibit a wide range of physiological responses to environmental variations and stress conditions (Robison & Warner, 2006; Hennige et al., 2009, 2010; Ragni et al., 2010; McGinty et al., 2012; Brading et al., 2013). The adaptation capacities of the Symbiodinium strains allow their hosts to occupy a wide range of ecological niches (Iglesias-Prieto et al., 2004; Finney et al., 2010) and to better survive following environmental changes (Berkelmans & van Oppen, 2006; LaJeunesse et al., 2010; Howells et al., 2012). Therefore, the host specificities along with the external environmental conditions act as the driving forces responsible for particular pairings between both partners (Stat et al., 2006). Light is likely the most important of these changing environmental factors. Although a pioneer study has provided evidence that the coral Stylophora pistillata is able to adapt to high light exposure or to shaded environments (Falkowski & Dubinsky, 1981), more recent studies have shown that the vertical distribution of certain coral species could be explained by their association with photosynthetic symbionts adapted to the particular light regime. These adaptation capacities of the symbionts may New Phytologist (2014) 204: 81–91 81 www.newphytologist.com New Phytologist 82 Research be associated with the lipid composition of their membranes (Tchernov et al., 2004; Dıaz-Almeyda et al., 2011), to Photosystem II (PSII) repair mechanisms (Takahashi et al., 2009) or to adaptation mechanisms of photosynthetic activity (Reynolds et al., 2008; Ragni et al., 2010). In the natural environment, the coral holobiont has to cope with important daily variations of light intensities that sometimes exceed the photosynthetic capacities of the Symbiodinium cells (such as during thermal stress) (Lesser & Farrell, 2004). This implies the existence of regulatory mechanisms when the light absorbed is in excess of that required for CO2 assimilation. Such mechanisms allow the dissipation of excess energy and/or to divert excess electrons from the photosynthetic apparatus. In addition to the linear electron flow (LEF) operating during oxygenic photosynthesis, various types of alternative electron flows (AEF) have been widely described in plastids of flowering plants and microalgae. They include cyclic electron flow around Photosystem I (PSI-CEF) as well as oxygen reduction through various processes in the chloroplast: the Mehler reaction, chlororespiration, photorespiration and mitochondrion-dependent re-oxidation of reducing equivalents (Asada, 1999; Badger et al., 2000; Cardol et al., 2008, 2011). In Symbiodinium, light-dependent O2 uptake (denoted UOL in the following) capacity can represent up to 45% of maximum O2 evolution and is relatively insensitive to changes in CO2 concentrations (Jones et al., 1998; Leggat et al., 1999; Badger et al., 2000). These characteristics are not consistent with a large Rubisco oxygenase activity (i.e. photorespiration) but could be explained by the Mehler reaction. This reaction, discovered by Mehler (1951), involves the direct reduction of O2 by PSI and leads to the production of superoxide ion (O2•). The generated reactive oxygen species (ROS) are rapidly converted into water thanks to the activities of the two chloroplast-associated enzymes, superoxide dismutase (SOD) and ascorbate peroxidase (APX) (together grouped into the Mehler Ascorbate Peroxidase or MAP pathway). The flow of electrons extracted from water at the PSII level to water produced by APX, is called the water-water cycle (WWC) (Asada, 1999). Jones et al. (1998) proposed a model in which temperatureinduced coral bleaching begins with the impairment of the CO2 fixation mechanisms and the increase of electron flow through the Mehler reaction in symbiotic dinoflagellates. Since then, Tchernov et al. (2004) and, later, Suggett et al. (2008) have reported an increase of ROS production corresponding to light-dependent O2 consumption in different phylotypes of Symbiodinium exposed to light and thermal stress. These results suggest that the Mehler reaction could be the main producer of ROS under stress conditions. However, the observed lightinduced O2 uptake could also be explained by chlororespiration or mitochondrial respiration (Badger et al., 2000; Ulstrup et al., 2005; Hill & Ralph, 2008; Reynolds et al., 2008). Moreover, as among the different phylotypes investigated, Symbiodinium type A1 possesses a higher ability to reroute electrons towards O2, it was suggested that representatives of this clade could exhibit enhanced capabilities for chlororespiration or PSI-CEF (Reynolds et al., 2008). New Phytologist (2014) 204: 81–91 www.newphytologist.com In the current context of climate change and its impact on the survival of symbiotic cnidarians, a better understanding of AEF in Symbiodinium is needed. Despite the fact that the involvement of the Mehler reaction, chlororespiration or PSI-CEF has often been suggested in many reports to date, the nature of AEF has never been proven in Symbiodinium species (Jones et al., 1998; Hoegh-Guldberg & Jones, 1999; Leggat et al., 1999; Jones & Hoegh-Guldberg, 2001; Hill & Ralph, 2008; Reynolds et al., 2008; Suggett et al., 2008). In this study, we have investigated in four different Symbiodinium strains the nature of photosynthetic oxygen-dependent electron transport, its light dependence and the occurrence of PSICEF during the induction phase and the steady state of photosynthesis. This work demonstrates that PSI-CEF and chlororespiration are both inefficient in cultured Symbiodinium strains and that the main site for light-dependent oxygen uptake (UOL) is the Mehler reaction located at the acceptor side of Photosystem I (PSI). Materials and Methods Strains and growth conditions The strain Avir was provided by P. Furla from the University of Nice (France). Strains FlAp1, Mf1.5b and Pd44b were obtained from M. A. Coffroth (the BURR Culture Collection, University at Buffalo, NY, USA). A detailed description of the Symbiodinium strains with their host species, geographic origin and sub-clade is given in Table 1. Cultures were grown in F/2 medium using artificial seawater (Reef Crystals Reef Salt, Instant Ocean, USA) at a salinity of 34 g l1 under cool white fluorescent lamps (intensity 75 lmol photon m2 s1) and at a temperature of 26 0.2°C. These experimental conditions are similar to those employed in previous studies (Reynolds et al., 2008; Suggett et al., 2008; Hennige et al., 2009). Exponential growth was maintained by sub-culturing into fresh medium once a week. Rate of growth, cell size and chlorophyll content are given in Table 2. Chlorophyll concentration and cell density Pigments were extracted from whole cells in 100% methanol in darkness, at 4°C for 24 h. Then cellular debris was removed by centrifugation at 10 000 g for 10 min at 4°C and chlorophyll a and c2 concentrations were determined by spectrophotometry according to the equations of Ritchie (2006). Cell densities were assessed using a Beckman Coulter Counter (Brea, CA, USA). For in vivo analyses, cell suspensions were adjusted to a chlorophyll concentration of 15 lg ml1 in F/2 medium. Samples were supplemented with 5 mM NaHCO3 to favor the carboxylase activity of the Rubisco and with the addition of 10% (w/v) Ficoll to prevent cell sedimentation when necessary. Chemical treatments Anoxia in the samples was achieved in 5 min by addition of glucose (50 mM), glucose oxidase (200 U ml1) and catalase Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust New Phytologist Research 83 Table 1 Symbiodinium strains with host specificities, geographic origins and sub-clade memberships Strain ID Host Location Country Ocean cp23S typea ITS typeb Avir FlAp1 Mf1.5b Pd44b Anemonia viridis Aiptasia pallida Montastrea faveolata Porites divaricata Villefranche-sur-Mer Florida Keys Florida Keys Florida Keys France USA USA USA Mediterranean Sea Caribbean Sea Caribbean Sea Caribbean Sea nd B184 B184 F178 A1 B1 B1 F1 a Based on the chloroplast 23S ribosomal DNA (rDNA) domain V (cp23S). Based on the Internal Transcribed Spacer rDNA. Strains FlAp1 belongs to clade B1 (M. A. Coffroth, pers. comm.) although it has been described as a clade A representative in the past (Correa et al., 2009). Strain Mf1.05b is a clade B1 representative (Granados-Cifuentes & Rodriguez-Lanetty, 2011) and Pd44b has been described as a clade F1 (M. A. Coffroth, pers. comm.) although it has been previously described as a clade C (Granados-Cifuentes & RodriguezLanetty, 2011). nd, not determined. b Table 2 Growth and cell characteristics of the Symbiodinium strains Strain Clade Cell size (lm) Growth rate (d1) Chla (pg per cell) Chl-c2 (pg per cell) Chl-c2/a Avir FlAp1 Mf1.5b Pd44b A1 B1 B1 F1 9.7 1.7 10.2 1.5 9.4 0.9 9.5 1.0 0.27 0.05 0.17 0.05 0.17 0.03 0.14 0.01 1.36 0.07 0.66 0.11 0.79 0.06 0.93 0.03 0.42 0.02 0.19 0.03 0.25 0.03 0.29 0.01 0.31 0.07 0.29 0.06 0.31 0.04 0.31 0.03 Cell sizes were measured under a light microscope (BX50; Olympus, Aartselaar, Belgium) with Olympus Cell^B imaging software. Pigment contents were measured by HPLC analysis of light adapted cells. All measurements were performed in triplicate and data are presented as means SD. (200 U ml1) enzymes. Glycolaldehyde (GA) was prepared as previously described (Anderson et al., 2007). Rotenone (10 mM), antimycin A (5 mM), salicylhydroxamic acid (SHAM, 200 mM), myxothiazol (5 mM) and oligomycin (5 mM) were prepared in ethanol with a final concentration of ethanol that did not exceed 2% (v/v) in the cell suspension. Potassium cyanide (KCN, 200 mM) was dissolved in distilled water. Oxygen exchange measurements Oxygen net exchange rates (net VO2 in pmoles O2 s1 lg1 Chla) were measured using a Clark-type electrode connected to an Oxylab oxygen electrode control unit (Hansatech Instruments, King’s Lynn, UK). Actinic light was provided by LED light sources peaking at 630–640 nm. Values at steady state were collected after 2 min illumination at each light intensity. By definition, net VO2 is the sum of three terms: gross oxygen evolution by PSII (EO), oxygen uptake in the dark (UOD) and, eventually, light-dependent oxygen uptake (UOL). Spectrophotometry: electrochromic shift In vivo spectroscopic measurements were performed with a JTS10 LED pump-probe spectrophotometer (Bio-logic, Claix, France). Spectral characteristics of the electrochromic shift (ECS) were determined as light absorption changes measured 55–85 ms after illumination with a saturating light pulse at 640 nm in anoxia in the presence or in the absence of a proton gradient uncoupler (FCCP, 1.8 lM). Due to the weak contribution of cytochromes to absorption changes at 510 and 546 nm, ECS was thereafter measured at 510–546 nm. Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust Linearity of the ECS The linearity of the ECS signal over electric field generated by charge separations at PSI+PSII or PSI levels was determined as described (Cardol et al., 2008). ECS changes were induced by a series of five laser flashes fired 100 ms apart and provided by a Nd:YAG Laser (Minilite II, Continuum), which generated one charge separation per PS. As the dark periods between two consecutive flashes are short, the ECS decrease between two flashes is negligible. Thus, the response of the ECS signal over the integrated electric field can be calculated (Fig. 1b and Supporting Information Fig. S1). This response was recorded in the presence or absence of PSII inhibitors DCMU (40 lM) and hydroxylamine (HA, 1 mM). PSI and PSII quantification The ratio between active PSI and PSII centers was estimated as described in Cardol et al. (2008). Briefly, the amplitude of the fast phase (1 ms) of ECS was monitored upon excitation with a laser flash. The contribution of PSII was calculated from the decrease in the ECS amplitude after the flash upon the addition of the PSII inhibitors DCMU (20 lM) and HA (1 mM), whereas the contribution of PSI corresponded to the amplitude of the ECS that was insensitive to these inhibitors (Fig. 1b, first point of the curves). In contrast to previously published methods (Hennige et al., 2009) our method does not require prior knowledge of the molar extinction coefficient of P700 to estimate the ratio of PSII to PSI reaction centres. New Phytologist (2014) 204: 81–91 www.newphytologist.com New Phytologist ECS (∆I/I ru) 1 ECS (10–3 ∆I/I, after flash) 84 Research (a) 0 –1 Control +FCCP –2 –3 437 487 537 (b) 4 3 2 no add HA+DCMU 1 587 250 (c) 750 500 PSI PSII PSI+PSII 250 0 200 400 600 800 PAR (μmol photon m–2 s–1) (d) 200 150 100 LEF+CEF (PSI+PSII) 50 0 0 2 ECS (10–3 ∆I/I, before flash) ETR (e– s–1 PS–1) Rate of charge separation (s–1 PS–1) 1000 1 0 λ (nm) CEF (PSI) 0 200 400 600 800 PAR (μmol photon m–2 s–1) Fig. 1 Electrochromic shift in Symbiodinium (a) Spectral characteristics of the electrochromic shift (ECS) signal in Avir (A1) Symbiodinium strain in anoxia in the presence or in the absence of a proton gradient un-coupler (FCCP, 1.8 lM). (ru, relative units). (b) ECS at 510–546 nm induced in Avir (B1) cells by a series of five laser flashes fired 100 ms apart in the presence or absence of PSII inhibitors DCMU (40 lM) and hydroxylamine (HA, 1 mM). Gray triangle, control (slope of linear regression = 0.97 with r2 = 1); white diamond, addition of HA (1 mM) and DCMU (40 lM) (slope of linear regression = 0.99 with r2 = 1). (c) Rates of photon absorption (s1 PS1) in Avir (A1) cells as a function of light intensity in the presence or absence of PSII inhibitors DCMU (40 lM) and hydroxylamine (HA, 1 mM). Gray circle, PSI (slope of linear regression = 0.82 with r2 = 1); white triangle, PSII (slope of linear regression = 1.24 with r2 = 0.99); black diamond, PSI+PSII (slope of linear regression = 1.08 with r2 = 1). (d) PSI-LEF (e s1 PS1) and CEF (e s1 PSI1) in Avir (A1) cells measured by following the relaxation of the ECS in the absence or in the presence of DCMU (20 lM), respectively. All measurements were performed in triplicate and data are presented as means SD. Photon absorption and photochemical rates Photon absorption rates of PSI and PSII (s1 PS1) were measured by recording the initial rate of ECS at the onset of actinic light, in the presence or absence of PSII inhibitors DCMU (40 lM) and HA (1 mM) (Nagy et al., 2014). Similarly, photochemical rates (s1 PS1) were measured by following the relaxation of the ECS (Joliot & Joliot, 2002) during the first 2 ms after switching off the actinic light. The slopes were then normalized on ECS values corresponding to one charge separation per PS (see earlier) (Fig. 1c). Spectrophotometry: P700 absorption changes P700 absorption changes were assessed with a probing light peaking at 705 nm (6 nm full width at half maximum). In order to remove nonspecific contributions to the signal at 705 nm, absorption changes measured at 740 nm (10 nm full width at half maximum) were subtracted. Actinic light was provided by LED light sources peaking at 630–640 nm. The quantum yield of photochemical energy conversion by PSI (YI) and the quantum yield of nonphotochemical energy dissipation due to donor side limitation (YND) or to acceptor side limitation (YNA) were calculated as (PM0 –P)/(PMP0), (P–P0)/(PM–P0) and (PM–PM0 )/ (PM–P0), respectively (Klughammer & Schreiber, 2008). P0 is New Phytologist (2014) 204: 81–91 www.newphytologist.com the absorption level when P700 are fully reduced, PM is the absorption level when P700 are fully oxidized in presence of 20 lM DCMU upon saturating continuous illumination, P is the absorbance level under continuous illumination and PM0 is the maximal absorption level reached during a 200-ms saturating light pulse (c. 3500 lmol photon m2 s1) on top of the actinic light. The P700 concentration was estimated by using PM value (e705 nm for P700 = 105 mM1 cm1; Witt et al., 2003). Chlorophyll fluorescence Chlorophyll fluorescence emission was measured using a FMS1 pulse modulated chlorophyll fluorometer (Hansatech Instruments, King’s Lynn, UK) when it was compared to oxygen evolution rates, or a JTS-10 spectrophotometer (Bio-logic) when it was compared to PSI activity. In both experimental systems, actinic light is provided by LED light sources peaking at 630– 640 nm. The effective photochemical quantum yield of Photosystem II (ΦPSII) and the photochemical quenching (qP) were calculated as (FM0 –FS)/FM0 and (FM0 –FS)/(FM0 –F00 ), respectively, where FS is the actual fluorescence level excited by actinic light, FM0 is the maximum fluorescence emission level induced by a 150-ms superimposed pulse of saturating light (3500 lmol pho0 ton m2 s1), and F0 is the minimum fluorescence after actinic light. It should be noted that compared to the FM value obtained Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust New Phytologist with a series of shorter (c. 100 ls) saturating pulses (Suggett et al., 2003; Hennige et al., 2009), FM values in low light (< 150 lmol photon m2 s1) are slightly higher (at most 20%) in our experimental systems. Calculating electron transport rate The relative electron transport rates (lmol e m2 s1) through PSII (rETRPSII) or PSI (rETRPSI) were calculated as the product of actinic light intensity by the corresponding ΦPSII (dimensionless) or YI (dimensionless), respectively. The absolute electron transport rates through PSII (ETRPSII) or PSI (ETRPSI) at a given light intensity, both expressed in e s1 PS1, were obtained by multiplying absorption rate (s1 PS1) by qP or YI, respectively. For a direct comparison between PSI and PSII activities, ETRPSI values were corrected by the PSI : PSII reaction center stoichiometry. Oxygen exchange rates (pmoles O2 lg1 Chla s1) were also expressed in e s1 PSII1 according to the following calculation and assuming 4 e per O2: (pmoles O2 lg1 Chla s1) 4 (lg Chla pmoles1 P700) (PSI : PSII). Results and Discussion Discrepancy between net oxygen evolution and PSII electron transport rate Four Symbiodinium strains (Avir, Mf1.5b, Pd44b and FlAp1) were used in this study (Table 1). They originate from the Mediterranean Sea (one strain) or from the Caribbean Sea (three strains) and are representatives of three different sub-clades (A1, B1, F1). Two strains have been isolated from sea anemones while the two others originate from reef-building corals. We first conducted photosynthesis-irradiance response curves where the apparent Photosystem II electron transfer rate (rETRPSII) was evaluated in parallel with net O2 exchange rate (VO2) at steady state of photosynthesis (Fig. 2a). We observed that VO2 saturated at a lower light intensity (c. 200 lmol photon m2 s1) compared to rETRPSII (> 400 lmol photon m2 s1) (Fig. S2). The linear relationship observed between VO2 and rETRPSII under low light (10–50 lmol photon m2 s1) is no more valid above 100–200 lmol photon m2 s1 (Fig. 2a). This discrepancy demonstrates the existence of an alternative photosynthetic electron flow. As the nonlinear relationship under high light was more pronounced in A1 (Avir), this strain was mainly investigated in the next steps of our study whereas the three other strains were also used in key experiments. Oxygen reduction occurs downstream of PSI in Symbiodinium Two mechanisms can explain why net VO2 rapidly saturated while rETRPSII continued to increase: PSII photochemistry takes place independently of the oxygen evolving complex activity (PSII-cyclic electron flow involving cytb559) (Prasil et al., 1996); or an alternative electron flow (AEF) involving O2 as a terminal acceptor consumes part of O2 produced at the PSII level. The Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust Research 85 spectacularly high capacity of Symbiodinium spp. for O2 uptake in the light (UOL) – that reaches up to c. 50% of maximum O2 evolution and is relatively insensitive to changing CO2 conditions (Leggat et al., 1999) – has already led to the inference that these features are not consistent with a large Rubisco oxygenase activity (i.e. photorespiration). Rather, the plastoquinol oxidase (PTOX) activity of chlororespiration, the activity of the Mehler reaction associated with PSI photochemistry, and/or the mitochondrial respiration could be involved in this process. Because AEF to PTOX or PSII-CEF involve only PSII, whereas other O2-dependent AEF involve both photosystems, their occurrence will have distinct effects on ETR measured at PSI or PSII. We thus recorded PSI and PSII photochemical quantum yield values under steady-state photosynthesis. In Symbiodinium, the existence of an electrochromic shift signal (ECS) (Fig. 1a) that responds linearly to the intensity of the electric field (Fig. 1b) allowed us to quantify the ratio between active PSI and PSII centers (Table 3), as well as the photon absorption rates of PS (Fig. 1c). These parameters further enabled us to convert PSI and PSII yields into absolute ETR in electrons per second per PSII (e s1 PSII1; see the Materials and Methods section). ETRPSI and ETRPSII behaved in a similar way: they increased with increasing light intensities and saturated at c. 400 lmol photon m2 s1 (Fig. 2c,d). Furthermore we obtained a linear relationship (r2 > 0.99, slope c. 1) between PSI and PSII activities (Fig. 2f), which indicates that both under low light (LEF to carbon fixation mainly) and under high light (LEF + AEF), PSII and PSI work in series. The observed AEF involving PSII and PSI must thus be diverted to oxygen downstream of PSI in Symbiodinium. The amplitude of AEF can be estimated by expressing rETRPSII and oxygen exchange rates shown in Fig. 2(a) in electrons per second (e s1 PSII1; Fig. 2b; see the Materials and Methods section for details). VO2 is the sum of three terms: EO (gross oxygen evolution by PSII), UOD (dark respiration) and UOL (light–dependent oxygen uptake). ETRPSII calculated from PSII photochemical quantum yield is also by definition equal to ETR derived from EO parameter. Therefore, UOL can be calculated as the difference between ETRPSII and (VO2 UOD), both expressed in e s1 PSII1 (see the Materials and Methods section). UOL was almost null at low light intensities (< 100 lmol photon m2 s1) but it could represent up to 50% of the total ETRPSII at highest light intensities. Sustained ETR under inhibition of dark respiration and Calvin cycle activity In order to determine whether UOL downstream of PSI is due to mitochondrial respiration, photorespiration or PSI-Mehler activity, we measured oxygen evolution and PS activities in the presence of mitochondrial and carbon fixation inhibitors. In a simplified view of ETR, the inhibition of AEF from PSII to O2 (i.e. UOL) will decrease ETRPSII (as well as EO proportionally) without any change in net VO2. In deep contrast, addition of glycolaldehyde (GA, 60 mM), an inhibitor of the Calvin cycle phosphoribulokinase (Buxton et al., 2012; Bhagooli, 2013), resulted New Phytologist (2014) 204: 81–91 www.newphytologist.com New Phytologist (a) 300 Mf1.5b 200 FlAp1 Pd44b 100 0 –40 (b) 400 AVIR ETR (e– s–1 PSII–1) rETRPSII (μmol e– m–2 s–1) 86 Research –20 0 20 (net VO2 -UOD) 300 Δ (U OL) 200 100 0 60 40 ΦII-based 0 200 2 300 (c) ETR (e– s–1 PSII–1) ETR (e– s–1 PSII–1) 300 200 100 PSII control PSII GA+KCN+SHAM 0 0 200 400 600 100 PSI Control PSI GA+KCN+SHAM 0 200 GA KCN+SHAM ETRPSII (e– s–1 PSII–1) rETRPSII (μmol e– m–2 s–1) Control –10 0 10 20 30 2 800 (f) 100 Control GA+KCN+SHAM 0 100 200 ETRPSI (e– s–1 PSII–1) in a reduction by c. 50% of the maximal net VO2 (Fig. 2e) while ETRPSII was decreased by only c. 20%. Moreover, addition of the inhibitor had almost no effect at low light intensities. This indicates that inhibition of the Calvin cycle does not prevent UOL (i.e. ETRPSII towards O2 reduction). We also used salicylhydroxamic acid (SHAM, 2 mM) and potassium cyanide (KCN, 2 mM), classical inhibitors of mitochondrial alternative oxidase (AOX) and cytochrome c oxidase (complex IV) activities, respectively. Both inhibitors act in Symbiodinium (Oakley et al., 2014) as in other photosynthetic organisms (Lapaille et al., 2010). In the presence of both mitochondrial inhibitors, UOD decreased by c. 80% (Fig. S3). Rotenone (mitochondrial complex I inhibitor, 1–200 lM), antimycin A or myxothiazol (mitochondrial complex III inhibitors, 0.5–10 lM), and oligomycin (mitochondrial ATP synthase inhibitor, 0.5–50 lM) had no effect on UOD (data not shown). SHAM and KCN are also well-known inhibitors of photosynthesis by affecting carbon concentration mechanism and RuBiSCO activity, respectively (Goyal & Tolbert, 1990). Moreover, KCN is also a potent inhibitor of ascorbate peroxidase (APX) (Nakano & Asada, 1987) and Cu/Zn superoxide dismutase (SOD) (Asada New Phytologist (2014) 204: 81–91 www.newphytologist.com 600 200 0 Net VO (pmol O2 s–1 μg–1 chla) 400 PAR (μmol photon m–2 s–1) 300 200 0 –20 800 200 0 800 (e) 100 600 (d) PAR (μmol photon m–2 s–1) 300 400 PAR (μmol photon m–2 s–1) Net VO (pmol O2 s–1 μg–1 chla) 300 Fig. 2 Electron transport rates (ETRs) at steady-state photosynthesis of Symbiodinium cells. (a, e). Comparison of rETRPSII (lmol e m2 s1) and net oxygen exchange rate (net VO2; pmol O2 s1 lg1 Chla) at 10, 25, 40, 60, 100, 200, 450 and 650 lmol photon m2 s1 (a) in four Symbiodinium strains or (e) in Clade A1 Avir cells in the presence or absence of glycolaldehyde (GA) (60 mM), KCN (2 mM) and SHAM (2 mM). (b) Comparison of ETRPSII (based on ΦPSII) and ETR based on [net VO2 – UOD] taken from panel (a) and expressed in e s1 PSII1 (see the Materials and Methods section for details). ETR towards O2 reduction (UOL) is the difference between the two curves. (c–d) ETRPSII and ETRPSI (e s1 PSII1) as a function of light intensity in the presence or absence of GA (60 mM), KCN (2 mM) and SHAM (2 mM). (f) Relationship between ETRPSII and ETRPSI (from panel c). Black diamonds, control (slope of linear regression = 0.99 with r2 = 1); gray squares, addition of GA (60 mM), KCN (2 mM) and SHAM (2 mM) (slope of linear regression = 1.07 with r2 = 0.99). All measurements were performed in triplicate and data are presented as means SD. et al., 1974). In the presence of both SHAM and KCN, net VO2 was diminished by c. 75%, barely compensating the remaining low UOD, while maximum ETRPSII and ETRPSI only decreased up to 30% (Fig. 2e). In the presence of KCN, SHAM and glycolaldehyde (GA), the relationship between PSI and PSII activities was still linear (Fig. 2f). This indicates that inhibition of mitochondrial respiration, Calvin cycle, and presumably SOD, APX or other possible metabolic pathways, did not prevent ETRPSII towards O2 reduction (i.e. UOL). Altogether, these results indicate that the PSIMehler reaction is the main AEF under high light, responsible for the light-dependent oxygen uptake (UOL) in Symbiodinium. Limited capacity of PSI-CEF and chlororespiration in Symbiodinium The results mentioned above also rule out the possibility that PSII activity under high light is independent of PSI activity (either through PSII-PTOX or PSII-CEF activities) or vice versa (PSI-CEF). The existence of chlororespiration has been suggested in cultured or in symbiotic Symbiodinium. Several authors Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust New Phytologist Research 87 Table 3 Photosynthetic parameters of Symbiodinium strains Strain Clade PSI/PSII Chla/P700 PSI-CEF (s1 PSI1) Max NPQ Avir FlAp1 Mf1.05b Pd44b A1 B1 B1 F1 1.9 0.3 0.9 0.1 1.0 0.2 1.0 0.1 533 72 515 13 541 27 505 8 82 18 5 12 1 91 0.49 0.05 0.40 0.03 0.59 0.01 0.36 0.03 PSI/PSII ratios were estimated from PSI and PSII charge separation capacity. Chla/P700 ratios were measured by absorption spectroscopy. PSI-CEF was estimated by following dark re-reduction kinetics of oxidized PSI at 705– 740 nm. Nonphotochemical quenching (NPQ) was calculated as the fluorescence quenching (FM/FM’1), at steady-state photosynthesis at 650 lmol photon m2 s1. All measurements were performed in triplicate and data are presented as means SD. reported a diminution of the maximal photochemical quantum yield (FV/FM) at night or during prolonged dark periods whose amplitude varies with the O2 concentration. This led them to postulate that this diminution was linked to a reduction of the PQ pool in conditions where O2 was limiting for chlororespiration (Jones & Hoegh-Guldberg, 2001; Hill & Ralph, 2005, 2008; Reynolds et al., 2008). Although we identified a PTOXrelated sequence in EST database of Symbiodinium CassKB8 strain belonging to the Symbiodinium clade A (Table S1), our current results suggest that if PTOX is expressed, its activity is very low, like in the green alga Chlamydomonas reinhardtii where its absence also leads to a reduction of the PQ pool in the dark (Houille-Vernes et al., 2011). Based on differences in chlorophyll fluorescence resulting from a series of saturating light pulses between representatives of various clades, a previous work also suggested that among alternative pathways, PSI-CEF could be more efficient in clade A representatives (Reynolds et al., 2008). Although we reproduced this original observation by comparing clade A1 Avir and clade F1 Pd44b strains (Fig. S4a), PSI-CEF was stable throughout the experiment in clade F1 Pd44b (Fig. S4b). In the same line, we found that PSI-CEF capacity is weak, not exceeding c. 20 e s1 PSI1, in all clade representatives (including B1 representatives; Table 3). Moreover, PSI-CEF did not exceed c. 5% of total ETRPSI in Avir A1 strain over the whole range of light intensities (Fig. 1d). This strongly suggests that the fluorescence signature previously reported (Reynolds et al., 2008) is not related to the occurrence of more efficient PSI-CEF in clade A representatives. The values measured here for PSI-CEF in Symbiodinium strains are in good agreement with values reported in the model green alga C. reinhardtii under oxic conditions (Alric et al., 2010). Finally, the presence of PGRL1, a major actor of PSI-CEF in green plants (Tolleter et al., 2011), in Symbiodinium EST databases (Table S1) suggests that the mechanism for PSI-CEF is conserved between these photosynthetic lineages. anoxic conditions cannot be maintained under steady state of photosynthesis due to oxygen evolution by PSII, especially in high light. Therefore, we recorded ETRPSI and ETRPSII upon the first 3 s of illumination (i.e. upon induction of photosynthesis) in the presence or absence of oxygen. In some microalgae, impairment of respiration following oxygen removal results in a depletion of intracellular ATP pool in the dark, which, according to the Pasteur effect, stimulates glycolysis (with an increase of the NADPH/NADP+ ratio in the stroma), the nonphotochemical reduction of the PQ pool and the transfer of a pool of PSII light harvesting complexes from PSII to PSI (state 2 transition) (Cardol et al., 2011). If this process also occurs in Symbiodinium after O2 depletion, it could affect the electron transport rate directly by modifying the chloroplast stromal redox poise (Jones et al., 1998) or indirectly by modifying the relationships between the electron transport rates and the photochemical quantum yields through changes in antenna sizes. However, state transition does not occur in Symbiodinium (Hill et al., 2012), which was confirmed in our experiments by the absence of changes in maximal fluorescence of chlorophyll during the time frame (< 15 min) used for all measurements (data not shown). Similarly, no change in the redox state of the PQ pool occurred, as judged by the constant FV/FM value. In oxic conditions, the saturation curves and relationship between ETRPSI and ETRPSII (Fig. 3a–c) were similar to those measured at steady-state photosynthesis (Fig. 2c,d,f), whereas in anoxic conditions, ETRPSI and ETRPSII saturated at lower light intensities (100–200 lmol photon m2 s1). The difference of ETR between anoxic and oxic conditions, called ‘O2-dependent’ ETR, is an indirect measurement of UOL (Fig. 3a,b). ‘O2-dependent’ ETR during photosynthesis induction has the same features as the estimated UOL at steady-state photosynthesis (Fig. 2b). Its value is almost null under low light and represents about half the total ETR in high light. Here, also, the relationships between ETRPSI and ETRPSII are unchanged (Fig. 3c). We also calculated the PSI quantum yields of nonphotochemical energy dissipation due to acceptor side limitation Y(NA) or to donor side limitation Y(ND) (see the Materials and Methods section for details). In the presence of oxygen, Y(NA) was low (< 0.1) and did not vary with increasing light intensities, while Y(ND) increased with the amount of light (Fig. 3d), reflecting the limitation of ETR by cytochrome b6f (Tikkanen et al., 2012). On the contrary, when cells were depleted in oxygen, Y(ND) remained very low (< 0.2) across the entire range of irradiance, while Y(NA) increased with light intensity up to 0.8 at the highest light intensities, reflecting a limitation on the acceptor side of PSI. Similar results were obtained for the three other Symbiodinium strains (Fig. S5, Table S2). Finally, ETRPSII and ETRPSI during photosynthesis induction in oxic conditions were also fully insensitive to mitochondrial inhibitors (Table 4). Oxygen acts as an efficient PSI electron acceptor upon photosynthesis induction Physiological roles of PSI-Mehler reaction in Symbiodinium The light-dependent electron flow to oxygen by the PSI-Mehler reaction must be inhibited in anoxic conditions. Obviously The Mehler reaction leads to the formation of O2 which is rapidly detoxified thanks to the activity of superoxide dismutase Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust New Phytologist (2014) 204: 81–91 www.newphytologist.com New Phytologist 88 Research (a) Control O2-dependent 200 150 100 50 0 0 200 400 600 PAR (μmol photon 250 m–2 250 O2-dependent -O2 100 50 200 0 400 600 800 PAR (μmol photon m–2 s–1) 1 (c) 200 (d) 0.8 150 100 Control O2-dependent 50 0 Control 150 0 800 (b) 200 s–1) Yield (ru) ETRPSII (e– s–1 PSII–1) -O2 ETRPSI (e– s–1 PSII–1) ETRPSII (e– s–1 PSII–1) 250 0.6 Y(NA) Control Y(ND) Control 0.4 Y(NA) -O2 Y(ND) -O2 0.2 0 0 50 100 150 200 250 ETRPSI (e– s–1 PSII–1) 0 200 400 600 800 PAR (μmol photon m–2 s–1) Fig. 3 Photosynthetic activities of Symbiodinium clade A1 Avir cells upon induction of photosynthesis. (a) ETRPSII and (b) ETRPSI (e s1 PSII1) as a function of light intensity upon induction of photosynthesis in presence or in the absence of O2; O2dependent ETR is the difference between ETR upon induction in presence and in absence of O2. (c) Relationship between ETRPSII and ETRPSI (from panels a and b). Black diamonds, control (slope of linear regression = 1.04 with r2 = 0.97); grey circles, absence of O2 (slope of linear regression = 0.91 with r2 = 0.90). (d) PSI quantum yield of nonphotochemical energy dissipation due to acceptor side limitation (YNA) or to donor side limitation (YND) in control cells and in O2-depleted cells. (ru, relative units). All measurements were performed in triplicate and data are presented as means SD. Table 4 Respiration and relative electron transport rate (rETR) of Symbiodinium strains Strain Clade Respiration (UOD) (pmol O2 s1 lg chl a1) Avir FlAp1 Mf1.5b Pd44b A1 B1 B1 F1 16.3 1.3 25.6 1.9 21.1 1.9 8.9 2.4 rETRPSIIa rETRPSIa Anoxia SHAM + KCN Anoxia SHAM + KCN 39.4 5.5 57.2 1.4 36.5 6.2 42.7 11.6 100.7 0.5 82.9 1.1 85.6 1.7 91.6 2.3 34.8 5.7 58.1 10.1 33.8 3.0 38.2 4.9 98.6 12.1 119.3 2.8 113.3 4.2 104.0 4.4 Respiration (oxygen uptake in the dark; UOD), rETRPSII and rETRPSI upon photosynthesis induction (3 s) of four Symbiodinium strains at c. 500 lmol photon m2 s1, in absence of oxygen (anoxia) or in presence of SHAM (1 mM) and KCN (1 mM). a Data are expressed as percentages of the values obtained for aerobic un-poisoned cells taken from Supporting Information Fig. S5. (SOD), ascorbate peroxidase (APX), and monodehydroascorbate reductase (MDHAR) (Asada, 2000), all being present in the most recent EST libraries of Symbiodinium (Table S1). The activity of SOD and APX in Symbiodinium have been reported since the beginning of the nineties and an increase of their activities has been linked to thermal and light/UV stress (Lesser et al., 1990). According to Richier et al. (2005) at least seven different isoforms of SOD are present in freshly isolated Symbiodinium cells of Anemonia viridis. Interestingly, Symbiodinium strains also possess homologous sequences for the Flv1 and Flv3 flavodiiron proteins (FDPs) (Table S1) which in cyanobacteria both participate to light-induced O2 uptake downstream of PSI. Flv activity, which consists in four-electron reduction of dioxygen (Frazao et al., 2000), does not lead to the production of reactive oxygen species (ROS) (Allahverdiyeva et al., 2011) and thus provides protection for PSI under fluctuating light (Allahverdiyeva et al., 2013). Whatever the exact nature of the oxygen reduction site directly downstream of PSI in Symbiodinium, its light dependency (Figs 2b, 3a,b) perfectly corresponds to a photoprotective mechanism. It takes place under high light intensities when the LEF to New Phytologist (2014) 204: 81–91 www.newphytologist.com CO2 fixation saturates (or is artificially inhibited), thus acting as an efficient electron sink. Consistent with this conclusion, when Symbiodinium are deprived of oxygen (AEF to O2 being thus prevented), ETR upon photosynthesis induction is substantially decreased and PSI acceptor-side limitation increases (Fig. 3d). By alleviating the excitation pressure over PSII and PSI, the PSI-Mehler reaction must thus prevent photoinhibition and photodamage. By acting as an efficient electron flow, it also generates an extra proton gradient across the thylakoid membranes, without net synthesis of NADPH. It might thus promote the synthesis of extra ATP probably required for CO2 fixation or other cellular reactions (Asada, 1999, 2000; Eberhard et al., 2008; Cardol et al., 2011). It is tempting to propose that the light-dependent extra ATP synthesis supported by WWC in symbiosis compensates for the energy loss due to the export of a substantial fraction of photosynthetic products. In addition, the O2 consumption in chloroplasts by the Mehler reaction has to reduce the O2 accessibility to the type II RuBisCO, thus lowering its oxygenase activity and maximizing the carbon fixation (Quigg et al., 2012). Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust New Phytologist Our data moreover suggest that oxygen reduction by the PSI-Mehler reaction operates similarly amongst A1, B1 and F1 strains. This of course does not mean that the capacity of the MAP pathway (Mehler reaction, SOD, APX and MDHAR) cannot vary from strain to strain. The MAP pathway possesses only a finite capacity for protection, beyond which the rate of ROS production will exceed the rate of ROS detoxification, and significant damages will occur. Consequently, when Symbiodinium cells are exposed to stress conditions (temperature, irradiance, etc.), the cellular ROS content can significantly increase (Jones et al., 1998; Tchernov et al., 2004; Suggett et al., 2008) and cause major damage to cellular components. For instance, McGinty et al. (2012) reported that ROS release and antioxidant activities varied significantly in multiple Symbiodinium phylotypes in response to elevated temperatures. Among them, Symbiodinium types A1 and F2 were the most tolerant, displaying no increase in ROS production, and were the only types able to increase SOD activity with temperature stress. When in symbiotic association, H2O2 produced by Symbiodinium cells can diffuse into the host tissue (Tchernov et al., 2004; Suggett et al., 2008) and provoke damages (Lesser & Farrell, 2004). Production of H2O2 also triggers a cellular signaling cascade that will ultimately lead to Symbiodinium cell death (Bouchard & Yamasaki, 2009) responsible for coral bleaching (see Weis, 2008 for more details about the cellular mechanisms leading to cnidarian bleaching). The resulting loss of symbionts by the coral host will have dramatic ecological consequences on the colony and over the entire reef ecosystem (Hoegh-Guldberg, 1999). It is noteworthy that although the Mehler reaction is largely acknowledged as responsible for part of the initiation steps of coral bleaching (Jones et al., 1998; Tchernov et al., 2004; Suggett et al., 2008), it was recently shown that coral bleaching could be eventually independent of photosynthetic activity (Tolleter et al., 2013). Representatives of clade A are mostly present in reef colonies inhabiting shallow waters (Toller et al., 2001), characterized by high light conditions, and which are likely to be subject to rapid changes in irradiance. A recent study aiming to investigate the impact of wave lensing (transient solar irradiance of high intensity and frequency) on the photophysiology of shallow-water coral species, suggested that corals living in this portion of the water column should possess special abilities for mitigating instantaneously high irradiance fluxes (Veal et al., 2010). Usually, high light-exposed plants have more PSII units with smaller light-harvesting units, relative to PSI (Anderson et al., 1988). Compared to the three other strains, Symbiodinium Avir strain (A1) has the higher PSI/PSII ratio. This observation is in good agreement with a previous study in which A1 strains also showed higher PSI:PSII ratios compared to F2 (but not B1) strains (Hennige et al., 2009). It has also been previously shown that when exposed to high light, the rates of O2 uptake are higher in clade A1 strains than in a clade B1 strain (Suggett et al., 2008), which is in accordance with our present results. We can thus propose that a higher PSI:PSII ratio is responsible for the higher rate of Mehler electron transport in clade A1 strain. Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust Research 89 Conclusions In this study devoted to four Symbiodinium strains belonging to three different sub-clades (A1, B1, F1), we present evidence that light-dependent oxygen consumption (UOL) involves both PSI and PSII working in series through the so-called PSI-associated Mehler reaction. Other AEF might also occur in Symbiodinium, such as chlororespiratory PTOX activity and PSI-cyclic electron flow, their activities are low compared to the extent of the Mehler reaction which can account for up c. 50% of maximum photosynthetic electron transfer rate. It should be noted that in plant leaves, the Mehler reaction does not exceed 15–20 s1 (Joliot, 1965; Joliot & Alric, 2013) which suggests that a specific/additional mechanism should occur in Symbiodinium (e.g. Flavodiron proteins whose presence in Symbiodinium is reported here for the first time). In Symbidiodium, UOL located at the acceptor side of PSI is the main alternative electron sink at the onset and steady state of photosynthesis. In this respect, in our opinion, the main physiological roles of the Mehler reaction in Symbiodinium are to ensure photoprotection (decreased excitation pressure on photosystems) and to provide additional ATP to cellular metabolism. Acknowledgements We would like to thank P. Furla and M. A. Coffroth for donation of the Symbiodinium strains. We also thank P. Falkowski and P. Joliot for helpful discussions. R. F. Matagne is acknowledged for his help in correcting the manuscript. We are also grateful to E. Perez and D. Baurain for bioinformatic analyses. This work was supported by grants of Fonds National de la Recherche Scientifique (FRS-FNRS; FRFC 2.4.631.09 to F.F. and MIS F.4520 to P.C.). S.R., P.C. and F.F. are Research Fellow, Research Associate and Senior Researcher from F.R.S.FNRS. References Allahverdiyeva Y, Ermakova M, Eisenhut M, Zhang P, Richaud P, Hagemann M, Cournac L, Aro E-M. 2011. Interplay between flavodiiron proteins and photorespiration in Synechocystis sp. PCC 6803. Journal of Biological Chemistry 286: 24 007–24 014. Allahverdiyeva Y, Mustila H, Ermakova M, Bersanini L, Richaud P, Ajlani G, Battchikova N, Cournac L, Aro E-M. 2013. Flavodiiron proteins Flv1 and Flv3 enable cyanobacterial growth and photosynthesis under fluctuating light. Proceedings of the National Academy of Sciences, USA 110: 4111–4116. Alric J, Lavergne J, Rappaport F. 2010. Redox and ATP control of photosynthetic cyclic electron flow in Chlamydomonas reinhardtii (I) aerobic conditions. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1797: 44–51. Anderson J, Chow W, Goodchild D. 1988. Thylakoid membrane organisation in sun/shade acclimation. Functional Plant Biology 15: 11–26. Anderson SE, Wells J, Fedorowicz A, Butterworth LF, Meade B, Munson AE. 2007. Evaluation of the contact and respiratory sensitization potential of volatile organic compounds generated by simulated indoor air chemistry. Toxicological Sciences 97: 355–363. Asada K. 1999. The water-water cycle in chloroplasts: scavenging of active oxygens and dissipation of excess photons. Annual Review of Plant Physiology and Plant Molecular Biology 50: 601–639. New Phytologist (2014) 204: 81–91 www.newphytologist.com 90 Research Asada K. 2000. The water-water cycle as alternative photon and electron sinks. Philosophical Transactions of the Royal Society B: Biological Sciences 355: 1419– 1431. Asada K, M-a Takahashi, Nagate M. 1974. Assay and inhibitors of spinach superoxide dismutase. Agricultural and Biological Chemistry 38: 471–473. Badger MR, von Caemmerer S, Ruuska S, Nakano H. 2000. Electron flow to oxygen in higher plants and algae: rates and control of direct photoreduction (Mehler reaction) and rubisco oxygenase. Philosophical Transactions of the Royal Society B: Biological Sciences 355: 1433–1446. Berkelmans R, van Oppen MJH. 2006. The role of zooxanthellae in the thermal tolerance of corals: a ‘nugget of hope’ for coral reefs in an era of climate change. Proceedings of the Royal Society B 273: 2305–2312. Bhagooli R. 2013. Inhibition of Calvin-Benson cycle suppresses the repair of photosystem II in Symbiodinium: implications for coral bleaching. Hydrobiologia 714: 183–190. Bouchard JN, Yamasaki H. 2009. Implication of nitric oxide in the heat-stress-induced cell death of the symbiotic alga Symbiodinium microadriaticum. Marine Biology 156: 2209–2220. Brading P, Warner ME, Smith DJ, Suggett DJ. 2013. Contrasting modes of inorganic carbon acquisition amongst Symbiodinium (Dinophyceae) phylotypes. New Phytologist 200: 432–442. Buxton L, Takahashi S, Hill R, Ralph PJ. 2012. Variability in the primary site of photosynthetic damage in Symbiodinium sp. (Dinophyceae) exposed to thermal stress. Journal of Phycology 48: 117–126. Cardol P, Bailleul B, Rappaport F, Derelle E, Beal D, Breyton C, Bailey S, Wollman FA, Grossman A, Moreau H et al. 2008. An original adaptation of photosynthesis in the marine green alga Ostreococcus. Proceedings of the National Academy of Sciences, USA 105: 7881–7886. Cardol P, Forti G, Finazzi G. 2011. Regulation of electron transport in microalgae. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1807: 912–918. Correa AMS, McDonald MD, Baker AC. 2009. Development of clade-specific Symbiodinium primers for quantitative PCR (qPCR) and their application to detecting clade D symbionts in Caribbean corals. Marine Biology 156: 2403– 2411. Dıaz-Almeyda E, Thome P, El Hafidi M, Iglesias-Prieto R. 2011. Differential stability of photosynthetic membranes and fatty acid composition at elevated temperature in Symbiodinium. Coral Reefs 30: 217–225. Eberhard S, Finazzi G, Wollman F-A. 2008. The dynamics of photosynthesis. Annual Review of Genetics 42: 463–515. Falkowski PG, Dubinsky Z. 1981. Light-shade adaptation of Stylophora pistillata, a hermatypic coral from the Gulf of Eilat. Nature 289: 172–174. Finney JC, Pettay DT, Sampayo EM, Warner ME, Oxenford HA, LaJeunesse TC. 2010. The relative significance of host–habitat, depth, and geography on the ecology, endemism, and speciation of coral endosymbionts in the genus Symbiodinium. Microbial Ecology 60: 250–263. Frazao C, Silva G, Gomes CM, Matias P, Coelho R, Sieker L, Macedo S, Liu MY, Oliveira S, Teixeira M et al. 2000. Structure of a dioxygen reduction enzyme from Desulfovibrio gigas. Nature Structural & Molecular Biology 7: 1041–1045. Goyal A, Tolbert NE. 1990. Salicylhydroxamic acid (SHAM) inhibition of the dissolved inorganic carbon concentrating process in unicellular green algae. Plant Physiology 92: 630–636. Granados-Cifuentes C, Rodriguez-Lanetty M. 2011. The use of high-resolution melting analysis for genotyping Symbiodinium strains: a sensitive and fast approach. Molecular Ecology Resources 11: 394–403. Hennige SJ, Smith DJ, Walsh SJ, McGinley MP, Warner ME, Suggett DJ. 2010. Acclimation and adaptation of scleractinian coral communities along environmental gradients within an Indonesian reef system. Journal of Experimental Marine Biology and Ecology 391: 143–152. Hennige SJ, Suggett DJ, Warner ME, McDougall KE, Smith DJ. 2009. Photobiology of Symbiodinium revisited: bio-physical and bio-optical signatures. Coral Reefs 28: 179–195. Hill R, Larkum A, Prasil O, Kramer D, Szabo M, Kumar V, Ralph P. 2012. Light-induced dissociation of antenna complexes in the symbionts of scleractinian corals correlates with sensitivity to coral bleaching. Coral Reefs 31: 963–975. New Phytologist (2014) 204: 81–91 www.newphytologist.com New Phytologist Hill R, Ralph PJ. 2005. Diel and seasonal changes in fluorescence rise kinetics of three scleractinian corals. Functional Plant Biology 32: 549–559. Hill R, Ralph PJ. 2008. Dark-induced reduction of the plastoquinone pool in zooxanthellae of scleractinian corals and implications for measurements of chlorophyll a fluorescence. Symbiosis 46: 45–56. Hoegh-Guldberg O. 1999. Climate change, coral bleaching and the future of the world’s coral reefs. Marine and Freshwater Research 50: 839–866. Hoegh-Guldberg O, Jones RJ. 1999. Photoinhibition and photoprotection in symbiotic dinoflagellates from reef-building corals. Marine Ecology-Progress Series 183: 73–86. Houille-Vernes L, Rappaport F, Wollman F-A, Alric J, Johnson X. 2011. Plastid terminal oxidase 2 (PTOX2) is the major oxidase involved in chlororespiration in Chlamydomonas. Proceedings of the National Academy of Sciences, USA 108: 20 820–20 825. Howells EJ, Beltran VH, Larsen NW, Bay LK, Willis BL, van Oppen MJH. 2012. Coral thermal tolerance shaped by local adaptation of photosymbionts. Nature Climate Change 2: 116–120. Iglesias-Prieto R, Beltran VH, LaJeunesse TC, Reyes-Bonilla H, Thome PE. 2004. Different algal symbionts explain the vertical distribution of dominant reef corals in the eastern Pacific. Proceedings of the Royal Society B 271: 1757– 1763. Joliot P. 1965. Reaction kinetics of coupled photosynthetic oxygen evolution. Biochimica et Biophysica Acta 102: 116–134. Joliot P, Alric J. 2013. Inhibition of CO2 fixation by iodoacetamide stimulates cyclic electron flow and non-photochemical quenching upon far-red illumination. Photosynthetic Research 115: 55–63. Joliot P, Joliot A. 2002. Cyclic electron transfer in plant leaf. Proceedings of the National Academy of Sciences, USA 99: 10 209–10 214. Jones RJ, Hoegh-Guldberg O. 2001. Diurnal changes in the photochemical efficiency of the symbiotic dinoflagellates (Dinophyceae) of corals: photoprotection, photoinactivation and the relationship to coral bleaching. Plant, Cell & Environment 24: 89–99. Jones RJ, Hoegh-Guldberg O, Larkum AWD, Schreiber U. 1998. Temperature-induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae. Plant, Cell & Environment 21: 1219– 1230. Klughammer C, Schreiber U. 2008. Saturation Pulse method for assessment of energy conversion in PS I. PAM Application Notes 1: 11–14. Lajeunesse TC, Parkinson JE, Reimer JD. 2012. A genetics-based description of Symbiodinium minutum sp. nov. and S. psygmophilum sp. nov. (dinophyceae), two dinoflagellates symbiotic with cnidaria. Journal of Phycology 48: 1380– 1391. LaJeunesse TC, Smith R, Walther M, Pinzon J, Pettay DT, McGinley M, Aschaffenburg M, Medina-Rosas P, Cupul-Maga~ na AL, Perez AL et al. 2010. Host–symbiont recombination versus natural selection in the response of coral– dinoflagellate symbioses to environmental disturbance. Proceedings of the Royal Society B 277: 2925–2934. Lapaille M, Thiry M, Perez E, Gonza lez-Halphen D, Remacle C, Cardol P. 2010. Loss of mitochondrial ATP synthase subunit beta (Atp2) alters mitochondrial and chloroplastic function and morphology in Chlamydomonas. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1797: 1533–1539. Leggat W, Badger MR, Yellowlees D. 1999. Evidence for an inorganic carbon-concentrating mechanism in the symbiotic dinoflagellate Symbiodinium sp. Plant Physiology 121: 1247–1255. Lesser MP, Farrell JH. 2004. Exposure to solar radiation increases damage to both host tissues and algal symbionts of corals during thermal stress. Coral Reefs 23: 367–377. Lesser MP, Stochaj WR, Tapley DW, Shick JM. 1990. Bleaching in coral reef anthozoans: effects of irradiance, ultraviolet radiation, and temperature on the activities of protective enzymes against active oxygen. Coral Reefs 8: 225–232. McGinty E, Pieczonka J, Mydlarz L. 2012. Variations in reactive oxygen release and antioxidant activity in multiple Symbiodinium types in response to elevated temperature. Microbial Ecology 64: 1000–1007. Mehler AH. 1951. Studies on reactions of illuminated chloroplasts: I. Mechanism of the reduction of oxygen and other hill reagents. Archives of Biochemistry and Biophysics 33: 65–77. Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust New Phytologist Muscatine L 1990. The role of symbiotic algae in carbon and energy flux in reef corals. In: Dubinsky Z, ed. Coral Reefs Ecosystems of the World. Amsterdam, the Netherlands: Elsevier, 75–87. € Nagy G, Unnep R, Zsiros O, Tokutsu R, Takizawa K, Porcar L, Moyet L, Petroutsos D, Garab G, Finazzi G et al. 2014. Chloroplast remodeling during state transitions in Chlamydomonas reinhardtii as revealed by noninvasive techniques in vivo. Proceedings of the National Academy of Sciences, USA 111: 5042–5047. Nakano Y, Asada K. 1987. Purification of ascorbate peroxidase in spinach chloroplasts; its inactivation in ascorbate-depleted medium and reactivation by monodehydroascorbate radical. Plant and Cell Physiology 28: 131–140. Oakley CA, Hopkinson BM, Schmidt GW. 2014. Mitochondrial terminal alternative oxidase and its enhancement by thermal stress in the coral symbiont Symbiodinium. Coral Reefs 33: 543–552. Pochon X, Gates RD. 2010. A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i. Molecular Phylogenetics and Evolution 56: 492–497. Prasil O, Kolber Z, Berry J, Falkowski P. 1996. Cyclic electron flow around Photosystem II in vivo. Photosynthesis Research 48: 395–410. Quigg A, Kotabova E, Jaresova J, Ka na R, Setlık J, Sediva B, Koma rek O, Prasil O. 2012. Photosynthesis in Chromera velia represents a simple system with high efficiency. PLoS ONE 7: e47036. Ragni M, Airs RL, Hennige SJ, Suggett DJ, Warner ME, Geider RJ. 2010. PSII photoinhibition and photorepair in Symbiodinium (Pyrrhophyta) differs between thermally tolerant and sensitive phylotypes. Marine Ecology Progress Series 406: 57–70. Reynolds JM, Bruns BU, Fitt WK, Schmidt GW. 2008. Enhanced photoprotection pathways in symbiotic dinoflagellates of shallow-water corals and other cnidarians. Proceedings of the National Academy of Sciences, USA 105: 13 674–13 678. Richier S, Furla P, Plantivaux A, Merle PL, Allemand D. 2005. Symbiosis-induced adaptation to oxidative stress. Journal of Experimental Biology 208: 277–285. Ritchie RJ. 2006. Consistent sets of spectrophotometric chlorophyll equations for acetone, methanol and ethanol solvents. Photosynthesis Research 89: 27–41. Robison JD, Warner ME. 2006. Differential impacts of photoacclimation and thermal stress on the photobiology of four different phylotypes of Symbiodinium (Pyrrhophyta). Journal of Phycology 42: 568–579. Stat M, Carter D, Hoegh-Guldberg O. 2006. The evolutionary history of Symbiodinium and scleractinian hosts – symbiosis, diversity, and the effect of climate change. Perspectives in Plant Ecology Evolution and Systematics 8: 23–43. Suggett D, Oxborough K, Baker N, MacIntyre H, Kana T, Geider R. 2003. Fast repetition rate and pulse amplitude modulation chlorophyll fluorescence measurements for assessment of photosynthetic electron transport in marine phytoplankton. European Journal of Phycology 38: 371–384. Suggett DJ, Warner ME, Smith DJ, Davey P, Hennige S, Baker NR. 2008. Photosynthesis and production of hydrogen peroxide by Symbiodinium (Pyrrhophyta) phylotypes with different thermal tolerances. Journal of Phycology 44: 948–956. Takahashi S, Whitney SM, Badger MR. 2009. Different thermal sensitivity of the repair of photodamaged photosynthetic machinery in cultured Symbiodinium species. Proceedings of the National Academy of Sciences, USA 106: 3237–3242. Tchernov D, Gorbunov MY, de Vargas C, Yadav SN, Milligan AJ, Haggblom M, Falkowski PG. 2004. Membrane lipids of symbiotic algae are diagnostic of sensitivity to thermal bleaching in corals. Proceedings of the National Academy of Sciences, USA 101: 13 531–13 535. Thornhill DJ, Lewis AM, Wham DC, LaJeunesse TC. 2014. Host-specialist lineages dominate the adaptive radiation of reef coral endosymbionts. Evolution 68: 352–367. Tikkanen M, Grieco M, Nurmi M, Rantala M, Suorsa M, Aro E-M. 2012. Regulation of the photosynthetic apparatus under fluctuating growth light. Philosophical Transactions of the Royal Society B 367: 3486–3493. Ó 2014 The Authors New Phytologist Ó 2014 New Phytologist Trust Research 91 Toller WW, Rowan R, Knowlton N. 2001. Zooxanthellae of the Montastraea annularis species complex: patterns of distribution of four taxa of Symbiodinium on different reefs and across depths. Biological Bulletin 201: 348–359. Tolleter D, Ghysels B, Alric J, Petroutsos D, Tolstygina I, Krawietz D, Happe T, Auroy P, Adriano J-M, Beyly A et al. 2011. Control of hydrogen photoproduction by the proton gradient generated by cyclic electron flow in Chlamydomonas reinhardtii. Plant Cell 23: 2619–2630. Tolleter D, Seneca FO, DeNofrio JC, Krediet CJ, Palumbi SR, Pringle JR, Grossman AR. 2013. Coral bleaching independent of photosynthetic activity. Current Biology 23: 1782–1786. Tremblay P, Grover R, Maguer JF, Legendre L, Ferrier-Pages C. 2012. Autotrophic carbon budget in coral tissue: a new 13C-based model of photosynthate translocation. Journal of Experimental Biology 215: 1384–1393. Ulstrup KE, Hill R, Ralph PJ. 2005. Photosynthetic impact of hypoxia on in hospite zooxanthellae in the scleractinian coral Pocillopora damicornis. Marine Ecology-Progress Series 286: 125–132. Veal CJ, Carmi M, Dishon G, Sharon Y, Michael K, Tchernov D, Hoegh-Guldberg O, Fine M. 2010. Shallow-water wave lensing in coral reefs: a physical and biological case study. Journal of Experimental Biology 213: 4304– 4312. Wakefield TS, Kempf SC. 2001. Development of host- and symbiont-specific monoclonal antibodies and confirmation of the origin of the symbiosome membrane in a cnidarian-dinoflagellate symbiosis. Biological Bulletin 200: 127– 143. Weis VM. 2008. Cellular mechanisms of cnidarian bleaching: stress causes the collapse of symbiosis. Journal of Experimental Biology 211: 3059–3066. Witt H, Bordignon E, Carbonera D, Dekker JP, Karapetyan N, Teutloff C, Webber A, Lubitz W, Schlodder E. 2003. Species-specific differences of the spectroscopic properties of P700: analysis of the influence of non-conserved amino acid residues by site-directed mutagenesis of photosystem I from Chlamydomonas reinhardtii. Journal of Biological Chemistry 278: 46 760– 46 771. Yellowlees D, Rees TAV, Leggat W. 2008. Metabolic interactions between algal symbionts and invertebrate hosts. Plant, Cell & Environment 31: 679–694. Supporting Information Additional supporting information may be found in the online version of this article. Fig. S1 Photoinduced absorption changes at 510–546 nm (ECS). Fig. S2 Light dependency of steady-state photosynthesis in four Symbiodinium strains. Fig. S3 Sensitivity of oxygen consumption to cyanide in the dark. Fig. S4 Chla fluorescence and PSI-CEF estimated from kinetics of dark re-reduction of P700+. Fig. S5 Relative ETR PSI and ETR PSII upon induction of photosynthesis in three strains of Symbiodinium. Table S1 Components of chloroplastic AEF in Symbiodinium Table S2 PSI quantum yield of nonphotochemical energy dissipation Please note: Wiley Blackwell are not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing material) should be directed to the New Phytologist Central Office. New Phytologist (2014) 204: 81–91 www.newphytologist.com