Electron Multiplier CCD Camera C9100-13 Instruction Manual Thank you for your purchase. CAUTION • Follow the safety precautions in Chapter 1 in order to avoid personal injury and damage to property when using this camera. The manual describes the correct handling method of camera and provides cautions in order to avoid accidents. Read this manual carefully beforehand use the camera correctly. After reading the manual, store it in a location where you can refer to it at any time. Ver. 1.6 Mar. 2008 HAMAMATSU PHOTONICS K.K. 8275172-06 ~ Blank page ~ C9100-13 Ver.1.6 1. SAFETY PRECAUTIONS 1-1 INDICATION OF SYMBOLS The symbols shown below are used for this camera. Protective conductor terminal Alternating current ON (Supply) OFF (Supply) 1-2 CLASSIFICATION OF WARNINGS We have classified the warning symbols that appear in this operating manual and on the camera as follows for better comprehension of their meaning. Make sure that you fully understand them and obey the instructions they contain. WARNING Improper handling of the camera without observing these warnings could lead to serious injury to the user and even death. CAUTION Improper handling of the camera without observing these cautions could lead to personal injury to the user or damage to property. Note This symbol indicates a note to help you get the best performance from the camera. Read the contents of the note carefully to ensure correct and safe use. Failure to observe one of these notes might impair the performance of the camera. This symbol indicates a cautionary item that should be obeyed when handling the camera. Read the contents carefully to ensure correct and safe use. This symbol indicates an action that is forbidden. Read the contents carefully and be sure to obey them. This symbol indicates a compulsory action or instruction. Read the contents carefully and be sure to obey them. 1 C9100-13 Ver.1.6 WARNING Power supply Use the camera with the voltage indicated on the rating sticker. Using a different voltage can damage the camera and lead to fire or electric shock. Cables Be careful not to place heavy objects on the cables or bend them excessively. Doing so can damage the cables and lead to fire or electric shock. Do not touch the plug with wet hands. Doing so can lead to electric shock. Power supply cord Use the accessory power supply cord when this camera is used. Do not attempt to dismantle or modify the camera Doing so can also lead to damage and even injury, as some internal components become very hot. Only touch parts as indicated in this manual. Do not insert a foreign substance into the camera Do not allow foreign objects such as combustible substances, metal objects or water to get inside the camera. They can damage the camera and lead to fire or electric shock. If an abnormality occurs Such as the image suddenly disappearing or a strange noise, smell or see smoke coming from the camera, stop the power supply immediately and contact Hamamatsu subsidiary or local distributor. Never attempt to repair the camera yourself. 2 C9100-13 Ver.1.6 CAUTION Power supply cord When unplugging the power supply cord, always pull by the plug, not the cord. Doing so can lead to fire or electric shock. Remove the power supply cord from the outlet when not using the camera for long periods of time. Doing so can damage the cable and lead to fire or electric shock. Connecting and disconnecting cables Always turn off the power before connecting and disconnecting cables. Fitting the camera head When fitting the camera head to a tripod or other fixture, use the screw (1/4-20UNC) in the center of a camera mount or the threaded sleeve (M3) about the mount's perimeter. Be careful not to allow the fitting screw to enter more than 5 mm from the surface of the mount. Screwing this in excessively may impair normal operation. Lenses Be careful not to screw the lens more than 7 mm onto the C-mount of the camera. Doing so can scratch the protective glass. (Some wide angle lenses in particular can have a thread of 7 mm or more.) Shipping precautions When transporting the camera by truck, ship, airplane, etc., wrap it securely in packaging material or something similar. Do not subject the camera to strong shocks Dropping the camera or other shocks can damage the camera. Disposal When disposing of the system, take appropriate measures in compliance with applicable regulations regarding waste disposal and correctly dispose of it yourself, or entrust disposal to a licensed industrial waste disposal company. In any case, be sure to comply with the regulations in your country, state, region or province to ensure the system is disposed of legally and correctly. 3 C9100-13 Ver.1.6 CAUTION Electron Multiplier gain (EM gain) precautions Do not set an EM gain and get incident light quantity more than necessary to keep the camera performance fine. Especially do set minimum EM gain when the lens is exchanged. And CCD chip has the following characteristic: 1) Higher EM gain leads bigger EM gain shift down at same incident light quantity. 2) More incident light quantity leads bigger EM gain shift down at same EM gain setting. Prevention of splashing cooling water Be careful not to pour cooling water on this camera or the peripheral equipment when the camera is used with water-cooling. Remove and install hoses only when the power supply of the camera and the peripheral device are off and the water is not flowing. Cooling water Use distilled or deionized water for the cooling and be sure to use the appropriate temperature range of the cooling water that is recommended for your circulating water cooler. If you plan on using antifreeze with your cooling water, please consult us first as this may cause problems with the camera. Handling of cooling water Refer to the instruction manual of the circulating water cooler to determine how to properly use that device. Keep the 1.2 liter/min cooling water flowing constantly. Remains of the data The reference image data taken for real time background subtraction or shading correction remains in the flash memory after the main power switch is turned off. For confidentiality, the user should take new reference image data with a non-private specimen prior to finishing with the camera. Wrong signal output When the input light becomes gradually larger, the output signal also becomes higher, and at last reaches the full bits. Additionally when the input light becomes much larger, the output signal becomes smaller. The excess light input sometimes makes the wrong signal output. 4 C9100-13 Ver.1.6 CAUTION Condensation When the cooling water temperature is lower than the ambient temperature, condensation can appear on the surface of the hose and inside of the camera. Condensation inside the camera will cause trouble. When using cooling water that is cooler than the ambient temperature, ensure that the ambient humidity is low and use the camera in an environment where condensation never happens inside the camera. The relations between the ambient temperature and humidity 各水温において結露を始める周囲温度と湿度の関係 which condensation begins to appear on 100.0 Ambient humidity (%) 周囲湿度 (%) 90.0 80.0 70.0 Water temperature 水温20℃ 20 °C 水温15℃ 15 °C 10 °C 水温10℃ 60.0 50.0 40.0 30.0 20.0 10.0 0.0 0 10 20 30 40 50 Ambient temperature (°C) 周囲温度 (℃) The above graph shows the relations between the ambient temperature, humidity, and when condensation happens for different temperatures of the cooling water. When the surface of the hose is seen, the occurrence of condensation can be confirmed. The ambient humidity when condensation appears is possible to calculate by the cooling water temperature and the ambient temperature. When the camera is used with the humidity which is higher can be calculated from water temperature and the ambient temperature in the graph, condensation is caused inside the camera. For example, when the water temperature is 20 °C and the ambient temperature is 25 °C, condensation appears inside the camera if the ambient humidity is 75 %. That time, the camera must use under the environment which keep lower humidity than 75 %. When the ambient temperature is 25 °C and the ambient humidity is 75 %, condensation appears inside the camera if the water temperature set under 20 °C. Condensation does not appear if the ambient temperature is lower than the water temperature. 5 C9100-13 Ver.1.6 2. CHECK THE CONTENTS OF PACKAGE When you open the package, check that the following items are included before use. If the contents are incorrect, insufficient, or damaged in any way, contact Hamamatsu subsidiary or local distributor without attempting to operate the camera. C9100-13 camera head C9100-13 camera control unit Power supply cord Camera cable: 5 m Lens mount cap (attached to the camera) Spare fuse: T 2 A 250 V (stored in fuse holder) C9100-13 instruction manual (this booklet) 1 1 1 1 1 1 1 [Option] Commercially available software CameraLink interface cable Circulating water cooler Hose set for water circulator (2 hoses): A10424-02 Note • Consult with Hamamatsu subsidiary or local distributor for options. • The cable listed in option is highly recommended for use with the camera. The camera system may not comply with CE marking regulation if another type of cable is used. • Proper performance may not be achievable if a non-recommended circulating water cooler is used. • Handle the circulating water cooler and the cooling water according to an instruction manual of the circulating water cooler. 6 C9100-13 Ver.1.6 3. INSTALLATION Avoid using or storing this camera in the following places • • • • • • • • • Where the ambient temperature might fall below 0 °C or rise above 40 °C Where the temperature varies extremely In direct sunlight or near a heater Where the humidity is 70 % or more or where there is dripping water Where condensation occurs Close to a strong source of magnetism or radio waves Where there is vibration Where it might come into contact with corrosive gases (such as chlorine or fluorine) Where there is a lot of dust Do not block ventilation openings • To prevent overheating in the camera’s interior, do not wrap the unit in cloth or other material or in any way allow the power supply unit’s ventilation ports to become blocked. If the camera is being operated in an enclosed environment, ensure to have a clearance of at least 10 cm from both the intake and exhaust vents when setting up the camera. 7 C9100-13 Ver.1.6 Contents 1. SAFETY PRECAUTIONS............................................................................ 1 1-1 1-2 INDICATION OF SYMBOLS ............................................................................... 1 CLASSIFICATION OF WARNINGS .................................................................... 1 2. CHECK THE CONTENTS OF PACKAGE................................................... 6 3. INSTALLATION........................................................................................... 7 4. OVERVIEW................................................................................................ 10 5. FEATURES................................................................................................ 11 6. NAME AND FUNCTION OF THE PARTS ................................................. 13 6-1 6-2 CAMERA HEAD ................................................................................................ 13 CAMERA CONTROL UNIT ............................................................................... 16 7. CONNECTION........................................................................................... 18 7-1 7-2 7-3 CONNECTION OF CABLES ............................................................................. 18 WHEN THE CAMERA HEAD IS FIXED ............................................................ 19 CONNECTION OF WATER-COOLING HOSES (WATER-COOLING ONLY) .. 20 8. OPERATION.............................................................................................. 21 8-1 8-2 8-3 8-4 8-5 PRECAUTIONS................................................................................................. 21 SELECTION OF COOLING METHODS............................................................ 22 PREPARATION FOR IMAGING ....................................................................... 22 IMAGING ........................................................................................................... 23 END OF IMAGING............................................................................................. 23 9. DESCRIPTION OF VARIOUS FUNCTIONS ............................................. 24 9-1 9-2 9-3 9-4 9-5 DUAL READOUT MODE .................................................................................. 24 MULTI SCANNING SPEED............................................................................... 25 EXTRENAL TRIGGER/ SYNCHRONOUS READOUT TRIGGER .................... 27 BINNING READOUT AND BINNING SETTINGS VALUES.............................. 29 REAL-TIME IMAGE PROCESSING FEATURES.............................................. 30 9-5-1 9-5-2 9-5-3 9-5-4 9-5-5 FUNCTION 1: REAL TIME BACKGROUND SUBTRACTION .............................................. 30 FUNCTION 2: SHADING CORRECTION............................................................................. 30 FUNCTION 3: RECURSIVE FILTER .................................................................................... 30 FUNCTION 4: FRAME AVERAGING.................................................................................... 31 FUNCTION 5: SPOT NOISE REDUCER ............................................................................. 31 9-6 9-7 9-8 9-9 9-10 PHOTON IMAGING MODE (PATENT PENDING) ............................................ 32 EM GAIN PROTECTION ................................................................................... 33 EM GAIN READJUSTMENT ............................................................................. 34 DIRECT EM GAIN CONTROL .......................................................................... 34 PROGRAMMABLE SYNCHRONIZATION OUTPUT ........................................ 35 10. PRECAUTIONS WHEN USING THE CCD................................................ 36 8 C9100-13 Ver.1.6 11. MAINTENANCE ........................................................................................ 38 11-1 FUSE REPLACEMENT ..................................................................................... 38 11-2 CARE................................................................................................................. 38 12. TROUBLESHOOTING CHECKLIST ......................................................... 39 12-1 12-2 12-3 12-4 THE POWER WAS TURNED ON...................................................................... 39 IMAGES NOT TRANSFERRED ........................................................................ 39 ALTHOUGH IMAGES ARE TRANSFERRED ................................................... 39 BUZZER SOUND .............................................................................................. 40 13. SPECIFICATIONS ..................................................................................... 42 13-1 CAMERA SPECIFICATIONS ............................................................................ 42 13-2 INTERFACE SPECIFICATIONS ....................................................................... 46 13-2-1 13-2-2 CAMERALINK INTERFACE SPECIFICATIONS................................................................... 46 TIMING I/O SPECIFICATIONS ............................................................................................ 48 14. DIMENSIONAL OUTLINE ......................................................................... 52 14-1 CAMERA HEAD ................................................................................................ 52 14-2 CAMERA CONTROL UNIT ............................................................................... 53 15. WARRANTY .............................................................................................. 54 16. CONTACT INFORMATION ....................................................................... 55 9 C9100-13 Ver.1.6 4. OVERVIEW C9100-13 evolved from the popular C9100-12 electron multiplier CCD camera. This new generation camera incorporates the latest Hamamatsu engineering and technology to provide a high speed readout rate of 32 frames/s at full spatial resolution and 16 bit digitization. With QE over 90 % and cooling down to – 90 °C, both low noise and high gain are realized in one camera. C9100-13 includes dual readout modes to take advantage of these features. In the EM-CCD readout mode, the on-chip gain provides high speed imaging at very low light levels. In the NORMAL-CCD readout mode, the low noise readout and deep cooling provide exceptional images even in long integration situations. High dynamic range, high resolution, high signal to noise ratios and high speed are all hallmarks of this new generation EM-CCD camera. In addition, Photon Imaging mode enables ultra low light detection. Other new features included in C9100-13 are real-time image processing (Background subtraction, Shading correction, and a Recursive filter) plus special internal and external synchronization features. It is now possible to optimize frame synchronization for spinning disk confocal microscopes at up to 32 frames/s with the synchronous readout trigger. 10 C9100-13 Ver.1.6 5. FEATURES (1) -90 °C cooling with Hermetic sealed head A newly designed hermetic sealed head includes a specially developed4 stage peltier cooler for the CCD and the entire camera head has been designed to optimize heat radiation. With both air and water cooling capabilities built-in, temperature at the CCD can be maintained as low as -90 °C with the water cooling operational and a water temperature of 10 °C or less. (2) Temperature stability and Gain stability Temperature stability is the key to gain stability in an EM-CCD camera so the camera provides temperature stability to within ± 0.01 °C at -80 °C with water cooling. (3) Stability of the Digitizer offset Stability of the digitizer offset is an important issue for reliable data in an EM-CCD camera. Fluctuation of the digitizer offset in the camera is very well controlled; showing only a few counts even at full 16 bit digitizer resolution and maximum EM gain. (4) Anti-reflection (AR) coatings on both sides of the vacuum head window The AR coating on both sides of the window provides greater than 99 % transmission efficiency between 450 nm and 750 nm and greatly reduces reflections from both outside and inside the vacuum head. A mask is applied on the metal components of the CCD chip to further minimize reflections from inside the vacuum chamber. (5) Optimization of Dark current The camera provides optimized driving methods for the CCD based on using the different characteristics CIC and thermal charges to minimize the contribution of both. For ease of use, these driving methods are combined with multiple readout speeds such as High scan mode for short exposure measurement, Middle or Slow scan mode for long exposure measurement. (6) EM Gain protection It is important to operate the camera in ways that minimize the rate of EM gain ageing and extend the life of the camera. The camera now provides user adjustable protection levels to reduce excessive EM gain ageing from unintentional events. (7) EM Gain readjustment When EM gain degradation does occur, a built-in feature of the camera readjusts the gain to the original values without removing the camera from the laboratory setup. (8) Direct EM Gain control The camera provides direct selection and setting of the EM gain in the gain register. (9) Dual readout mode The camera has both an EM-CCD readout and a NORMAL CCD readout. With recent innovations, the NORMAL CCD readout offers very low noise readout and very low dark current for long integration exposures. This creates tremendous flexibility in applications. From ultra low luminescence samples to routine fluorescence microscopy, the conventional readout provides high S/N images. With the EMCCD readout, high frame rates at low intensities are possible for live cell imaging and spinning disk confocal applications. (10) Multiple pixel clock selection The camera offers a selection of pixel clock speeds in both EM-CCD readout mode and normal CCD readout mode. According to the application, it is possible to select a clock speed that offers the best S/N. Faster clock speed offer faster frame rates and lower clock speed provides lower noise. 11 C9100-13 Ver.1.6 (11) Photon imaging mode (Patent Pending) Due to the excess noise factor in the multiplication register, EM-CCD cameras have traditionally had limited use in photon counting applications. Intensified CCDs have dominated this field for many years. Using over 20 years of experience in the design and production of image intensifiers and electronic circuit technology, Hamamatsu Photonics K.K. has incorporated a unique photon counting imaging mode into the camera. (12) Real time image processing Traditionally, background correction and sensor non-uniformity corrections in images required separate software operations and processing time in a computer. The camera is equipped with on-board digital signal processing functions that offer real time image processing that replaces the software and computer processing. When implemented, highly corrected images emerge directly from the camera at full frame rates. A special recursive filter function is also included to dramatically reduce the effects of excess noise when the EM-CCD operation is selected. This real time filter provides full frame rate images of averaged images; creating exceptional quality EM-CCD images. (13) External trigger / Synchronous readout trigger (Patent pending) When an EM-CCD camera is combined with a real-time confocal microscope, it is very important to synchronize the camera readout with the rotation of the disk in the case of spinning disk type or with the galvanometer in case of a mirror scanning type. Vertical smear or a non-uniform intensity (banding) appears in images unless the same number of scan points are created in every point in the image. To overcome this, the camera is designed with a specially developed synchronous readout trigger that assures even intensity in every image. (14) Programmable trigger signal output To simplify the control and synchronization of peripheral devices, the camera is equipped with a versatile programmable trigger signal output. It is possible to freely control delay time, pulse width, and polarity of the trigger signal output with external commands. (15) Multiple heads capability Scientific imaging often requires the simultaneous acquisition of data from multiple cameras. Until now this has been difficult but a new feature of the camera is the ability to synchronously drive two or more cameras. Synchronization is accurate to within one pixel clock operation. To take full advantage of this feature over a wide range of applications, each camera is able to operate synchronously even with individual exposure settings and individual EM gain settings. With this option, multiple wavelength imaging and multiple polarization angle imaging is simply and reliably done with high precision. 12 C9100-13 Ver.1.6 6. NAME AND FUNCTION OF THE PARTS 6-1 CAMERA HEAD ⑧ ⑧ ① ① ⑧ ② ⑨ ③ ② ② ④ ⑤ ⑥ ⑦ Fig. 6-1 ① Lens mount C-mount lens or optical system with C-mount can be attached. Note • C-mount has a depth of 7 mm. Screwing the lens too far into the camera may scratch the glass surface. ② Blow hole (Air-cooling only) The fan circulates the air in order to decrease interior temperature. • Do not block ventilation openings in order to prevent the camera’s interior from overheating. If the camera is being operated in an enclosed environment, ensure to have a clearance of at least 10 cm from both the intake and exhaust vents when setting up the camera. ③ Connector for maintenance only This part is for the maintenance. It does not usually open and close. • Do not open the cover. 13 C9100-13 Ver.1.6 ④ Timing I/O connector [TIMING I/O] This connector is used for input and output of timing signals when synchronizing with external equipment. Note • Please refer to Chapter 13-2-2 [TIMING I/O SPECIFICATIONS] for the details about each pins. ⑤ Camera connector [POWER] This is for connecting the camera head to the camera control unit with a camera cable. ⑥ Mode switching switch From the factory, this switch is set in the following position. 1 2 3 4 SW ON SW OFF Air-cooling/Water-cooling mode is selected with SW4. From the factory, cooling mode is set to air-cooling (SW4=OFF). If this camera will be used with air-cooling, do not change SW4. If this camera will be used with water-cooling, change SW4 to the “ON” position. • Do not change the switch except for SW4. • When changing this switch, turn off the power to the camera. • Use a flathead screwdriver to change the switch. ⑦ CameraLink interface connector [DIGITAL OUT] This is for connecting the camera head to an image capture board using a CameraLink interface cable. ⑧ WATER connector [WATER] (Water-cooling only) This connects the camera head to the circulating water cooler with a cooling water hoses. And this connector is the Stop valve style*. The insert position of WATER IN/OUT is not specified. * Stop valve style: The valve shuts automatically when the hose is taken off from the connector. • Confirm that water is flowing in when water-cooling is started. • Do not stop water flow while the camera is powered and keep the 1.2 liter/min cooling water flowing constantly. • Please refer to the manual of the circulating water cooler for instructions on how to use the water cooler. Note • Proper performance may not be achievable if a non-recommended circulating water cooler is used. CAUTION 14 • Be careful not to pour cooling water on this camera or the peripheral equipment when the camera is used with water-cooling. Remove and install hoses only when the power supply of the camera and the peripheral device are off and the water is not flowing. C9100-13 Ver.1.6 • Do not touch the water connectors or the surrounding metallic base while the camera is on as the temperature of these parts can get very high. Please shut off the camera and allow it to cool before touching the water connectors. • Never touch this part when a buzzer alarm (beep sound) sounds. WARNING [Top view of camera head] ⑨ Camera mount base This is used to secure the camera head in place when using a tripod. Note • Be careful not to allow the fitting screw to enter more than 5 mm from the surface of the mount. Screwing this in excessively may impair normal operation. 15 C9100-13 Ver.1.6 6-2 CAMERA CONTROL UNIT [Front panel] ① ② [Rear panel] ⑦ ⑧ ⑨ ④ ⑤ ⑥ ③ Fig. 6-2 ① Power switch [POWER] This is the power switch. Press it to “ | ” to turn on the power to the camera. ② Power LED This green LED is turned on to indicate that the power is turned on. ③ Camera connector [CAMERA POWER] This is for connecting the camera control unit to the camera head with a camera cable. ④ Air outlet This is the outlet for the heat ventilation. • Do not block the air outlet. Make sure a space of at least 10 cm is available at the back of the unit for ventilation. ⑤ AC inlet [LINE] This is the power supply connector. Use the supplied power supply cord to connect it. 16 C9100-13 Ver.1.6 ⑥ Fuse holder This is the holder for the power supply fuse. Note • Please refer to Chapter 11-1 [FUSE REPLACEMENT] when replacing a fuse. ⑦ TIMING IN connector [TIMING IN 1] This is the connector for input of the timing signal at time of external synchronization. This has the equivalent function to 1 pin of the timing I/O connector [TIMING I/O] on the camera head and either connector on the camera head or on the camera control unit can be selected for this function by the application software. ⑧ TIMING OUT connector [TIMING I/O 2] This is the connector for output of the timing signal at time of external synchronization. Exposure timing is output. This has the equivalent function to 3 pin of the timing I/O connector [TIMING I/O] in the camera head. Note • Please refer to Chapter 13-2-2 [TIMING I/O SPECIFICATIONS] for the details about each pins. ⑨ TIMING OUT connector [TIMING I/O 3] This is the connector for output of the timing signal at time of external synchronization. The timing signal which synchronized in the exposure timing is output. The timing signal can set the delay time and the pulse width. This has the equivalent function to 5 pin of the timing I/O connector [TIMING I/O] in the camera head. Note • Please refer to Chapter 13-2-2 [TIMING I/O SPECIFICATIONS] for the details about each pins. 17 C9100-13 Ver.1.6 7. CONNECTION 7-1 CONNECTION OF CABLES Connect each cable based on the connection diagram below. Circulating water cooler ④ 2 Cooling water hoses (Water-cooling only) Camera head [Rear panel] Power supply cord ③ Camera control unit ① Camera cable ② CameraLink Interface cable Computer Image capture board Fig. 7-1 • When cables are connected, confirming the power switch is in the OFF position. 18 C9100-13 Ver.1.6 ① Camera cable This cable is used for connecting the camera head to the camera control unit. • Tighten the screws of the connector securely. ② CameraLink interface cable (Option) This cable is used for connecting the CameraLink interface connector to the image capture board mounted on the host computer. • Tighten the screws of the connector securely. ③ Power supply cord This cord is used for supplying a power source to the camera control unit. This cord is used for supplying a power source to the camera control unit. • Connect this cord after confirming that power supply voltage of the camera is in the range of the specifications. ④ Cooling water hoses (Water-cooling only) (Option) 2 hoses are used for connecting the camera head to the circulating water cooler. Note • The WATER IN/OUT positions are interchangeable. Note • Please see the instruction manual of the circulating water cooler for the details of the circulating water cooler. Note • Proper performance may not be achievable if a non-recommended circulating water cooler is used. CAUTION 7-2 • Be careful not to pour cooling water on this camera or the peripheral equipment when the camera is used with water-cooling. Remove and install hoses only when the power supply of the camera and the peripheral device are off and the water is not flowing. WHEN THE CAMERA HEAD IS FIXED The camera head is fixed by using the fitting screw at the bottom of the camera head. Fix the camera head with a tool such as a laboratory jack so that a load may not be imposed to the part of C-mount when the camera is fixed by C-mount. Note • Be careful not to allow the fitting screw to enter more than 5 mm from the surface of the mount. Screwing this in excessively may impair normal operation. • To prevent overheating in the camera's interior, do not wrap the unit in cloth or other material or in any way allow the power supply unit's ventilation ports to become blocked. If the camera is being operated in an enclosed environment, ensure clearance of at least 10 cm from both the intake and exhaust vents when setting up the camera. 19 C9100-13 Ver.1.6 7-3 CONNECTION OF WATER-COOLING HOSES (WATER-COOLING ONLY) (1) Camera head Connect the hose to the camera head as shown in Figure 7-2. 1 up towards the hose side of ○ 2 . To remove the hose, pull ○ ② ① Fig. 7-2 • Push the hose until it is fixed on the connector. CAUTION • Be careful not to pour cooling water on this camera or the peripheral equipment when the camera is used with water-cooling. Remove and install hoses only when the power supply of the camera and the peripheral device are off and the water is not flowing. (2) Circulating water cooler 3 (Internal diameter: 4 mm / External diameter: 6 mm) and ○ 4 (Internal The hose has ○ diameter: 8 mm / External diameter: 13.5 mm). (Refer to Fig.7-3) 3 , the hose of ○ 4 can be removed when the hose of ○ 3 is When the hose is used in ○ 5 into ○ 4 side. pulled with pushing the part (Refer to Fig.7-4) of ○ ③ ④ ⑤ ④ Fig. 7-3 CAUTION 20 ③ Fig. 7-4 • When the cooling water temperature is lower than the ambient temperature, condensation can appear on the surface of the hose and the inside of the camera. Condensation inside the camera will cause trouble. When using cooling water that is cooler than the ambient temperature, ensure that the ambient humidity is low and use the camera in an environment where condensation never happens inside the camera. • Refer to the details about condensation to page 5. C9100-13 Ver.1.6 8. OPERATION 8-1 PRECAUTIONS Be careful of the following when you operate the camera. (1) Water-cooling When the camera is used with water-cooling, use distilled or deionized water for the cooling and confirm that water of 1.2 liter/min is always flowing. For the appropriate temperature range of the cooling water, confirm with the instruction manual of your circulating water cooler. Consult us before using any antifreeze with your cooling water as the ingredients may damage the camera. Note • Please see the instruction manual attached to the circulating water cooler for more information about your circulating water cooler. Note • Proper performance may not be achievable if a non-recommended circulating water cooler is used. (2) Protection circuit A double protection circuit protects this camera’s thermoelectric cooling device. If the heat dissipater becomes abnormally hot, the protection circuit sets off a buzzer alarm from the camera head while simultaneously cutting the current supply to the peltier element. If the camera is in water-cool mode, the camera head fan will automatically start running. When the protection circuit operates like this, immediately turn off the power switch. Then locate and remove the cause of the overheating. Once the temperature of the heat dissipater returns to normal, the protection circuit will reset itself and power will return to the peltier cooler. When the protection circuit is set, serial commands are rejected and errors are returned. The camera will continue to output image data. • Turn on the power again after confirming the cause of the protection circuit being set was resolved. • When the cause of the protection circuit being set is not resolved, stop the operation at once, and contact to Hamamatsu subsidiary or local distributor. • If the CCD does not cooled normally after the cause of the protection circuit being set has been resolved, contact to Hamamatsu subsidiary or local distributor. 21 C9100-13 Ver.1.6 8-2 SELECTION OF COOLING METHODS The cooling method is changed with SW4 of the mode selection switch on the camera head's rear panel. At factory shipment, this switch is set to the following position. 1 2 3 4 SW ON SW OFF From the factory, cooling mode is set to air-cooling (SW4=OFF). If this camera will be used with air-cooling, do not change SW4. If this camera will be used with water-cooling, change SW4 to the “ON” position. 8-3 • Do not change the switch except for SW4. • When this switch is changed, turn off the power supply of all the devices. • Use a small flathead screwdriver to change the switch. PREPARATION FOR IMAGING Use the following procedure when starting operating of the camera. (1) Connect the equipment as shown in Figure 7-1 before operating the camera. (2) Switch the camera control unit's power switch to ON. • Confirm that a power supply is being supplied to the camera. • When the air-cooling, confirm that the fan is turning. When the water-cooling, confirm that cooling water flows always. In addition, be sure the amount of cooling water is 1.2 liter/min. (3) Start cooling with the application software referring to its instruction manual. After several seconds of switching the power of the camera on, start up the application software. • When the camera temperature is unstable like before the camera temperature reaches the setting temperature, the dark signal output also becomes unstable and sometimes becomes zero. (4) After the cooling starts, wait approximately 40 minutes for the temperature to stabilize; this completes preparation for imaging. • Start the measurement after the sensor temperature becomes stable because the Electron Multiplier gain depends on the temperature. 22 C9100-13 Ver.1.6 8-4 IMAGING (1) Control timing with the application software referring to its instruction manual. • If the camera might not start up properly even when its power is turned on, immediately shut down the camera and application software and restart them. Allow a suitable length of time before restarting the application software. Note • The application software is not attached to this camera. • Check that CCD temperature is always stable. • The abnormal high temperature inside the camera sounds the buzzer (beep tone). Then turn off the power supply immediately. And remove the factors which increase the temperature. • Turn on a power supply again after removing the factors which increase the temperature. • If the factors which increase the temperature cannot remove, stop the camera operation immediately. And contact Hamamatsu subsidiary or local distributor. • When the CCD is not cooled normally even after resolved the cause that a protection circuit worked, contact to Hamamatsu subsidiary or local distributor. Note 8-5 • Please refer to Chapter phenomenon of the camera. 12 [TROUBLESHOOTING CHECKLIST] about unusual END OF IMAGING Carry out the procedure below when imaging is finished. (1) End the imaging or transmission of image data with the application software. (2) Turn off the power to the camera and peripheral equipment. Note • The reference image data taken for real time background subtraction or shading correction remains in the flash memory after the main power switch is turned off. For confidentiality, the user should take new reference image data with a non-private specimen prior to finishing with the camera. 23 C9100-13 Ver.1.6 9. DESCRIPTION OF VARIOUS FUNCTIONS 9-1 DUAL READOUT MODE General EM-CCD camera is mainly designed for rapid imaging in low light situations and is commonly used for biological field, typically used for live cell imaging. The significant improvement of the C9100-13 cooling performance minimizes the dark current to ultimately low level and this improvement contributes to realize the longer exposure time imaging (EM-CCD readout mode). In addition to that, the C9100-13 also provides the NORMAL-CCD mode, which is equivalent readout mode as a normal cooled CCD camera. This dual readout feature is unique for the C9100-13. Fig. 9-1 is a diagram of the CCD structure. When the camera is operated in the EM-CCD readout mode, the accumulated charges are transferred from the register elements to the multiplication elements and read out through the EM-CCD readout AMP. When the camera is operated in the NORMAL-CCD readout mode, the accumulated charges are not transferred to the multiplication elements. Those are read out through the NORMAL-CCD readout AMP, which is located at the left end of the register elements. The performance of this mode is equivalent to the normal cooled CCD camera. This mode realizes the low noise and high S/N readout, keeping the readout noise at extremely low level. Resister Elements Multiplication Elements EM-CCD Readout AMP NORMAL-CCD Readout AMP Fig. 9-1 The horizontal serial register structure of EM-CCD The EM-CCD readout mode is effective for dynamic and real time image acquisition under low light environment. The NORMAL-CCD readout mode is suitable for ultra-low luminescence imaging which a cooled CCD camera is normally used. These two types of readout mode widen the performance range of the C9100-13 to be suitable under various experimental conditions. The S/N crossover point of the two modes is where the incident photon number is around 100 photons/pixels/frame. Two readout modes are selectable to acquire the best images depends on the sample conditions. 24 C9100-13 Ver.1.6 9-2 MULTI SCANNING SPEED The C9100-13 provides not only the selectable readout mode (dual readout) but also variable pixel clock (multi-scanning speed). The combination of these two modes contributes to set the best readouts for the various applications. The multi-scanning speed is available for both EM-CCD mode and the NORMAL-CCD mode. The readout noise is the electrical noise, which is mostly caused by the CCD output amplifier and the circuits. The pixel clock change strongly affect to the level of readout noise. Typical readout noise figures at various pixel clocks are shown in the following table (at minimum EM gain). Pixel Clock Readout Noise 11 MHz 2.75 MHz 0.69 MHz 25 electrons 20 electrons 8 electrons EM-CCD Readout mode (Minimum EM gain) Minimum Exposure time 30.52 ms 122.11 ms 488.44 ms As it is shown on the table above, the readout noise is as low as about 8 electrons at 0.69 MHz pixel clock speed. However, due to the structural reason of the CCD (FFT-CCD) on the C9100-13, the time takes to readout the whole charges, which accumulated in the storage areas should be as same as the minimum exposure time. In the case of 0.69MHz readout, the frame rate may not be fast enough. It may be inadequate for the consecutive and real time image acquisition. In addition to that, the readout noise consists of the Clock Induced Charge (CIC), which is generated by clocking and the dark charge, which is called the thermal charge. Generally, when EM gain is set as low, the CIC and the thermal charge are negligible. The result is as shown in the table above. However, when EM gain is set as high, the levels of those charges need to be considered carefully. The relation of the exposure time and the CIC or the thermal charge is shown in the following graph. Dark Charge 10 1 Arbitrary unit 0.1 0.01 0.001 0.0001 0.01 CIC Thermal Total 0.1 1 10 Exposure Time 100 1000 Fig. 9-2 25 C9100-13 Ver.1.6 The CIC is constant per readout but the thermal charge is proportional. In the short exposure time, the CIC is dominant and in the long exposure the thermal charge become dominant. The CIC and the thermal charge is contradictory, the amount of those charges will vary depends on the voltage setting of the camera. The C9100-13 is optimized as when the pixel clock is 11MHz the CIC become low, and at pixel clock of 2.75MHz and 0.69MHz, the thermal charge becomes low. Therefore, set pixel clock to 11MHz when EM gain is high and exposure time is relatively short. Set the pixel clock to 2.75MHz or 0.69MHz when EM gain is high and exposure time is long. The following table shows the relationship of pixel clock, readout noise and minimum exposure time in the NORMAL-CCD readout mode. NORMAL-CCD Readout mode Pixel Clock Readout Noise 2.75 MHz 0.69 MHz 17 electrons 8 electrons Minimum Exposure Time 122 ms 488 ms As shown in the table above, the readout noise at the 0.69 MHz pixel clock is equivalent to the extremely low noise performance of a general cooled CCD camera. This performance is best for applications such as long exposures luminescence imaging. The 2.75 MHz pixel clock provides almost 8 Hz frame rate, making this a good choice for routine live cell fluorescence imaging. • Approximately 2.5 seconds is necessary for changing pixel clock speed as a waiting time. 26 C9100-13 Ver.1.6 9-3 EXTRENAL TRIGGER/ SYNCHRONOUS READOUT TRIGGER The camera has various external trigger modes for synchronization with peripheral devices. In particular, the camera has both an External trigger IN where an external device is master and the camera is the slave and an External trigger OUT where the camera is the master controlling external devices. A unique and important external trigger mode called Synchronous readout trigger, is designed to be used for the synchronization of the camera with a con-focal microscope. This mode eliminates the vertical smearing or banding noise that comes from a mismatch between camera readout and the confocal disk rotation speed. (1) External Edge trigger Using External Edge trigger, the camera starts an exposure at the (positive or negative) edge of an external trigger signal. The exposure time is defined by the application software. The camera ignores any additional trigger input until the exposure is completed and frame readout is done completely, even if another trigger signal is received during the exposure. Using this mode means the frame rate will be slower than the internal trigger mode because the minimum frame rate is the sum of the exposure time plus frame readout time. Fig. 9-3 shows the timing chart for the external edge trigger using the positive edge. The minimum permissible exposure time setting is 10 µs, so the frame rate with 10 µs exposure time setting is close to the frame rate in the internal trigger mode. Idle Exposure time Frame readout Idle Exposure time Frame transfer Fig. 9-3 (2) Level trigger Using External Level trigger the exposure time is fully controlled by the trigger pulse. If the trigger polarity is selected for a positive trigger, the camera starts an exposure at the positive edge of external trigger, and maintains the exposure time during the positive period. The, camera stops the exposure and begins the frame readout at the negative edge of the trigger. In this external level trigger mode the frame rate is slower than the internal trigger mode because the minimum frame rate is the sum of the exposure time plus frame readout time. Fig. 9-4 shows the timing chart for the external level trigger using the positive edge. The minimum exposure time setting is 10 µs, so the frame rate with 10 µs exposure time setting is close to the frame rate in the internal trigger mode. Idle Exposure time Frame readout Idle Exposure time Frame transfer Fig. 9-4 27 C9100-13 Ver.1.6 (3) Start trigger This trigger mode is used for fast frame acquisition. A single trigger input from either the positive or negative edge can be used to start the exposure. The camera can simultaneously expose and readout in this mode and it operates in the internal trigger mode. No additional trigger signals are needed for continuous imaging at high frames rates. (4) Synchronous readout trigger Synchronous readout trigger is a special external trigger mode which is designed to be used for synchronizing the camera with a confocal microscope. There are two ways to do this. ① Synchronous Readout mode 1 In this mode, the external trigger IN is used and the trigger interval defines the exposure time. When the trigger IN signal is synchronized with the spin cycle timing of the disk in a confocal microscope, the camera readout cycle will synchronize properly even when the spinning disk speed is not constant since the trigger interval depends on the disk speed. Without proper synchronization, images will show uneven illumination (called banding noise). Fig. 9-5 shows the timing chart for this mode. An added feature of this mode is that it is possible to get almost the same frame rate as the internal trigger mode because the exposure and frame readout can be done simultaneously. Exposure time 1 Exposure time 2 Frame readout 0 Frame readout 1 Exposure time 3 Frame readout 2 Fig. 9-5 ② Synchronous Readout mode 2 In this mode, the external trigger IN is used and the number of trigger pulses defines the exposure time. Some spinning disk confocal microscopes use pulses from pinholes in the disk for timing. Setting the trigger IN signal in the camera to start exposure on one pulse from the spinning disk and finish exposure after some number of pulses will synchronize the exposure and readout with the spin cycle timing of the disk in a confocal microscope. The camera readout cycle will synchronize properly even when the spinning disk speed is not constant since the trigger interval depends on the number of disk pulses. Without proper synchronization, images will show uneven illumination (called banding noise). As an example, if one confocal scanning disk rotation is completed by 4 pulses, the camera should be set for one exposure time to equal 4 pulses from application software. The camera starts the exposure on the first pulse, and finishes the exposure time when 4th pulse is detected. Fig. 9-6 shows the timing chart in this mode with 4 pulses for one exposure cycle. An added feature of this mode is that it is possible to get almost same frame rate as the internal trigger mode because the exposure and frame readout can be done simultaneously. Exposure time 1 Frame readout 0 Exposure time 2 Frame readout 1 Fig. 9-6 28 Exposure time 3 Frame readout 2 C9100-13 Ver.1.6 9-4 BINNING READOUT AND BINNING SETTINGS VALUES This camera has the normal readout mode (1x1) which readouts digital output pixels without any process, in addition to that following readout modes are also available. 2×2 binning readout Add 2 pixels horizontally and 2 pixels vertically 4×4 binning readout Add 4 pixels horizontally and 4 pixels vertically • Cooling temperature may become unstable right after binning mode is changed and it may take a certain time the temperature to become stable again. • After binning mode is changed, wait for a sufficient time before operating the camera. In addition, 8×8 and 16×16 binning readouts are option. (Name: binning option, Model name: M10453-01) Note • When the camera is operated in 16×16 binning readout mode at 0.69 MHz with no incident light, low intensity vertical line will appear at the left end of image on NORMAL-CCD mode and on EM-CCD mode the line will appear at the right end of image. This line only appears when the camera is operated in this particular setting. 29 C9100-13 Ver.1.6 9-5 REAL-TIME IMAGE PROCESSING FEATURES The design of camera incorporates a fundamentally different way of thinking about how to produce the highest quality images from a digital camera. Rather than rely on software and computer processing after the camera output, some of the most common image processing functions are included in the camera itself. Selecting these functions provides real time image improvement and increased S/N. Otherwise, the camera outputs raw data that is preferred for quantitative analysis. 9-5-1 FUNCTION 1: REAL TIME BACKGROUND SUBTRACTION The camera normally does not need dark current subtraction due to the superb cooling but in very long exposures in the NORMAL-CCD readout mode, it may still offer some benefit to subtract dark current. In brightfield images, it is often beneficial to subtract backgrounds to eliminate spots and other image artifacts. In both cases, it is usually best to add a constant value (offset) to the result to avoid zero values in a fluorescence image or to create a similar intensity to the normal background in brightfield images. The value of this offset can be freely adjusted to suit the requirements. The camera does all this and will store 3 different reference images for this operation. Images with different binning, sub-array and exposure settings can all be stored and used as reference images. 9-5-2 FUNCTION 2: SHADING CORRECTION It is common in microscopy to find uneven illumination in images. Correcting this unevenness improves the results and often reveals additional details in the image. The camera can calculate an intensity difference map for every pixel, and apply this map to the original image to remove the difference; correcting the shading of the microscope or other illumination system. 9-5-3 FUNCTION 3: RECURSIVE FILTER A Recursive filter is used to significantly improve S/N in images by averaging noise in both the signal and the camera. In EM-CCD cameras it is especially effective because of the low number of signal photons and the excess noise factor in the multiplication process. Real time images are produced by averaging the values in the same pixel over several images at the selected pixel clock rate. Each output image is the result of an average of some number of previous images. For static or slowly changing images this is not a problem. For dynamic images, image smearing will result. Having these real time image processing features built into the camera is an important and effective way to speed up image acquisition. Producing processed images in the camera relieves the computer CPU of many very time intensive operations, especially when high frame rate sequential images are required. When acquiring 4D and 5D images, the number of peripheral devices and image handling operations can cause frame dropping due to CPU stress. Entire experiments may become meaningless if frames are lost and the real time image processing functions in the camera can help prevent this. Calculation of recursive filter (e.g. N=4) Vout(n) = Vout(n-1) + ( Vin(n) - Vout(n-1) ) / 4 Vout(n) : Present output image Vout(n-1) : Output image of 1 previous frame Vin(n) : Present input image 30 C9100-13 Ver.1.6 9-5-4 FUNCTION 4: FRAME AVERAGING Frame averaging is a processing of multiple frames that result in the output of a simple average of the last current frame and a number of previous frames that equal the desired frame number. During the averaging time, the last previously averaged image is used as the output until a new average is completed. At that point the output is refreshed and the next average is started. This form of temporal averaging provides significant increases in the S/N since both detector noise and signal are averaged. Calculation of frame averaging (e.g. N=4) Vout(n) = ( Vin(n) + Vin(n-1) + Vin(n-2) + Vin(n-3) ) / 4 Vout(n) Vin(n) Vin(n-1) Vin(n-2) Vin(n-3) 9-5-5 : : : : : Present output image Present input image Input image of one previous frame Input image of second previous frame Input image of third previous frame FUNCTION 5: SPOT NOISE REDUCER This image processing function operates on random spots of intensity by comparing incoming images and eliminating signals that meet the criteria for noise in one image but not in others. Small bright signals are compared to previous frames to see if they occur in more than one frame. If they occur in only a single frame the value is replaced the value of the comparison frame. If similar value occurs in two frames then the original value is kept in both. This processing eliminates noise elements like cosmic rays to increase the signal to noise ratio and overall quality in images. Caution should be exercised using spot noise reducer if the signals of interest have properties similar to random noise events. 31 C9100-13 Ver.1.6 9-6 PHOTON IMAGING MODE (PATENT PENDING) Since there is no way to eliminate the excess noise factor from the electron multiplication process in an EM-CCD, it has always limited the image quality at very low light levels. Because of their smaller excess noise factors Image intensifiers have dominated applications where the signal level is in the single photon range. The camera has a special Photon Imaging mode to overcome this limitation. For many years, Hamamatsu Photonics K.K. has been making photon counting cameras with special image intensifiers. Based on this experience, unique circuits for driving the electron multiplication process have been designed and included in the camera to enable high quality images in ultra low light. [Features of the photon imaging mode] - Must be used in the EM-CCD readout mode of operation, has no effect in NORMAL-CCD readout mode of operation. - Most useful for signal levels at which maximum EM gain has no apparent signal or very little signal. - Increases signal intensity 5× in mode 1, 13× in mode 2 and 21× in mode 3. - Quantitative linear signal output in each mode means quantification is possible if mode is constant. - Improved spatial resolution at very low light levels. Fig. 9-7 clearly shows the benefits of the special Photon Imaging mode. Using a standard test target, the image on the left, taken using the EM-CCD readout mode, is almost unrecognizable as a test target but the image on the right, taken with the Photon Imaging mode, can be clearly seen to be a test target. Fig. 9-7 32 C9100-13 Ver.1.6 Fig. 9-8 shows a similar test using a dot chart. As shown in the image on the right, it is possible to detect each dot clearly with the photon imaging mode. The photon imaging mode offers new opportunities in microtiter plate readers, DNA chip readers and other applications where the signal of interest is composed of isolated spots of low intensity. Fig. 9-8 9-7 EM GAIN PROTECTION EM-CCD devices are known to exhibit a loss of gain over time called gain ageing. This deterioration in the gain factor can be overcome by adjusting the voltage applied to the stages in the gain register but there is a limit to how much voltage can be applied before destroying the device. It is important to operate the camera in ways that minimize the rate of gain ageing and extend the life of the camera. Since the rate of gain ageing depends on the incident light levels and gain settings combined, it is possible to minimize both most of the time. Occasionally mistakes are made, like changing lenses or objectives with the gain on or having illumination on the CCD for long periods without knowing it. To prevent excessive gain ageing from such unintentional events, the camera provides two levels of protection. Level 1 is the EM gain warning. This warning is an audible alarm or software warning that excessive output conditions have occurred which may damage the detector. This warning can be set to one of three levels or disabled completely by the operator. Level 2 is the EM gain protection mode. This feature will switch the camera to protection mode, stopping the charge transfer through the gain register. The degree of protection is based on a combination of the critical signal level and the number of frames the operator selects in the gain warning dialog box. Like the warning feature it may also be disabled by the operator. 33 C9100-13 Ver.1.6 9-8 EM GAIN READJUSTMENT Over time, all EM-CCD cameras exhibit gain ageing, also called gain degradation. Fortunately, the gain can be readjusted by raising the voltage in the gain multiplication register, but only within limits. Reducing the rate of gain ageing by careful use of the detector is helpful and the camera includes effective EM gain protection (see 9-7) but at some point it will be necessary to readjust the gain to the original values. The EM gain readjustment for the camera is simple and the software, labeled “EMGREAD.exe”, can be found in the DCAM modules. For example, on the HCImage disk included with the camera, look in “HCImage Drivers DCAMAPI Tools EMGREAD.exe” to find the software. Search for “EMGREAD.exe” in DCAM-API folder. “EMGREADW_ja.pdr” and “EMGREADW_en.pdf” is the operational manual in Japanese and in English respectively. DCAM-API folder can be searched using these file names. 9-9 DIRECT EM GAIN CONTROL Previously, EM gain controls divided the actual EM gain range into 256 steps. Using a chart in the camera manual, it was possible to estimate the actual EM gain of the camera. For instance, if the gain 100 was selected from the EM gain control in the software window, the actual gain was between 4× and 1200× for the camera and the chart in the manual would indicate this to be equivalent to 40× gain in the multiplication register. Direct EM gain control is now possible using any software that supports the Hamamatsu DCAM application. Setting the software control to 100 means the gain register will provide 100× multiplication (See Fig. 9-9). Like all EM-CCD devices gain ageing occurs over time and this value will change slightly but it can easily be checked and readjusted to the nominal value as described before. Fig. 9-9 34 C9100-13 Ver.1.6 9-10 PROGRAMMABLE SYNCHRONIZATION OUTPUT The Programmable Synchronization output is an important feature of the camera. For biomedical imaging, timing control of peripheral devices such as excitation light sources, filter changers, mechanical shutters, stage and focusing controls is essential. Triggering these peripherals with accurate timing directly from the camera can improve the speed of image acquisition for high speed applications. The camera offers freely programmable synchronization output, delay time, pulse width, and trigger signal polarity. Note • Please refer to 13-2-2 [TIMING I/O SPECOFOCATIONS] for the details about Timing I/O specifications. 35 C9100-13 Ver.1.6 10. PRECAUTIONS WHEN USING THE CCD The camera uses a CCD. Read the following points regarding handling of the CCD carefully. (1) White spots During long exposure times, imperfection in the CCD’s silicon wafer cause white spots to be generated on the image. As of the present time, there is no workaround for this phenomenon. Certain cooling temperature characteristics can cause these white spots to multiple in relation to exposure time, but using dark subtraction* can compensate for this phenomenon. Atomic rays may generate white spot. * After acquiring an image using an arbitrary exposure time, the CCD is placed in a dark state for an equal amount of time, and reacquires the image without any light exposure. Subsequently, the second image is subtracted from the first, canceling dark-area information from the original image. (2) Smear When imaging very bright objects, bright vertical stripes (vertical smear) may be visible in the images being taken. This is due to the incident light while transferring the electrons from sensor part to memory part. The amount of smear is dependent on (the ratio between) readout time and exposure time. Smear tends to appear more strongly at shorter exposure time to readout time. (3) Folding distortion A rough-edged flicker may be visible when imaging striped patterns, lines, and similar subject matter. (4) Interference fringes pattern Coherent light such as LASER light may generate interference fringes pattern on image. (5) Afterimage When strong light enters, it is known that several photons remain as an afterimage. When EM gain is high, these are observed. (6) Over light When the input light becomes gradually larger, the output signal also becomes higher, and at last reaches the full bits. Additionally when the input light becomes much larger, the output signal becomes smaller. The excess light input sometimes makes the wrong signal output. (7) Electron Multiplier gain (EM gain) Start the measurement after the inside cooling temperature becomes stable because the Electron Multiplier gain depends on the temperature. The inside cooling temperature usually becomes stable after approximately 40 minutes. 36 C9100-13 Ver.1.6 (8) EM gain shift The camera employs a solid-state image sensitive device and EM gain may be shifted depending on usage as its characteristic. The shift is observed more at bigger EM gain setting to a certain incident light or at more incidents light to a certain EM gain setting. Note • Incident light and EM gain setting more than necessary should be avoided for long usage. • Set the EM gain always to minimum when the lens is attached and detached. (9) EM gain fluctuation When the camera mode is changed, for example, binning, sub-array or pixel clock speed settings, it is known the CCD chip cooling temperature and EM-gain may be drifted. This is caused by the rapid change of CCD chip power consumption due to the mode change. 37 C9100-13 Ver.1.6 11. MAINTENANCE 11-1 FUSE REPLACEMENT Replace a fuse in accordance with the following process. (1) (2) (3) (4) Turn off the power switch. Unplug the power supply cord from the AC inlet. Remove the fuse holder with something like a screwdriver. (Fig.11-1) Before replacement, you must check that the new fuse has the same rating as the previous fuse. (Fig.11-2) (5) After replacement, return the fuse holder to its original location in the AC inlet. Fuse holder Fuse holder AC inlet Small flat screwdriver AC inlet Fuse (Connected to circuit) Spare fuse (Not connected to circuit) Fig. 11-1 CAUTION • Always replace with the spare fuse, or a fuse of the same type as indicated on the ratings sticker. The standard of the fuse is “T 2 A 250 V”. • Be careful not to use excessive force when fitting the fuse holder. You might damage the fuse. 11-2 CARE Clean the exterior with a soft, dry cloth. • Do not use a wet cloth, dirty cloth. 38 Fig. 11-2 C9100-13 Ver.1.6 12. TROUBLESHOOTING CHECKLIST If an abnormality occurs, look up the possible causes in the following tables and, if necessary, report the details to Hamamatsu subsidiary or local distributor. 12-1 THE POWER WAS TURNED ON Cause Countermeasure Fuse has blown AC inlet is loose Power supply cord is broken LED circuit is damaged Power switch is damaged Replace fuse Reconnect Chapter 11 7 Contact Hamamatsu subsidiary or distributor 16 12-2 IMAGES NOT TRANSFERRED Cause Countermeasure Poor connection of cables Cable is broken The correct command has not been sent to the camera Reconnect Replace the cable Chapter 7 Recheck command 12-3 ALTHOUGH IMAGES ARE TRANSFERRED (1) Scratches or discoloration visible on the screen Cause Countermeasure Glass on front of camera head is dirty Wipe with gauze soaked in alcohol Chapter (2) Image is blurred Cause Countermeasure Back focus is incurred CCD chip is dirty Contact Hamamatsu subsidiary or distributor Chapter 16 (3) Only shadowed images are output Cause Countermeasure Lens mount cap is still on Amount of light is too much or too low Contrast enhancement is too high or too low Remove the cap Reduce amount of light Reduce gain Chapter (4) All screens overflow Cause Countermeasure Too much amount of light Contrast enhancement is too high Reduce amount of light Reduce gain Chapter (5) Noise appears on the screen Cause Countermeasure Exogenous noise Find and remove cause Poor connection of internal connector Defective circuit system Contact Hamamatsu subsidiary or distributor Chapter 16 39 C9100-13 Ver.1.6 12-4 BUZZER SOUND When buzzer sounds, what it indicates is different in “Normal operation” and in “EM gain readjustment”. (1) Long intermittent beep of single tone at normal operation (Increased temperature inside the camera) Cause Countermeasure Trouble of heat radiation Air-cooling Water-cooling Circulating water cooler is not turned on Cooling water is not flowing Foreign object inside connector or hose blocks water circulation Circuit trouble Chapter Remove obstacles which blocks ventilation opening Circulate water 8 Turn on circulating water cooler Contact Hamamatsu subsidiary or distributor 16 • Beep sound indicates protective circuit is activated because of a trouble of heat radiation in the camera. When this beep sounds, turn off the camera immediately and apply countermeasure to remove cause. • Cause of heat radiation must be removed before turning on this camera again. • If any cause of heat radiation cannot be solved or removed, stop operation and make contact to Hamamatsu subsidiary or local distributor. • If cooling performance of the camera does not recover, even after the cause of heat radiation is removed, make contact to Hamamatsu subsidiary or local distributor. (2) Short intermittent beep of single tone at normal operation (Excessive output) Cause Countermeasure Excessive output Avoid excessive output circumstances by decreasing volume of incoming light, decreasing EM gain or shorten exposure time. Chapter 9 (3) Long consecutive beep tone at normal operation (EM gain protection) Cause Countermeasure EM gain protection function is activated Remove cause of excessive output circumstances by decreasing volume of incoming light, decreasing EM gain or shorten exposure time. Then operate the camera again, for example to the LIVE mode. Chapter 9 (4) Intermittent double blips at EM gain readjustment (Excessive light at EM gain readjustment) 40 Cause Countermeasure Alarm of excessive light for EM gain readjustment See if a cap dedicated for this camera is properly attached. Chapter 9 C9100-13 Ver.1.6 (5) Intermittent triple blips at EM gain readjustment at EM gain readjustment (End of EM gain readjustment) Cause Countermeasure Notice of EM gain readjustment is ended EM gain readjustment is ended Chapter 9 (6) Long consecutive beep tone at EM gain readjustment (Reached to limit of EM gain readjustment) Cause Countermeasure EM gain readjustment did not completed because readjustment feature is reached to its limit Reached to limit of EM gain readjustment Chapter 9 41 C9100-13 Ver.1.6 13. SPECIFICATIONS 13-1 CAMERA SPECIFICATIONS (1) Electric specifications Camera head type Window AR mask Imaging device Effective number of pixels Cell size Effective area EM-CCD Pixel clock rate NORMAL-CCD EM gain (typ.) Ultra low light detection Fastest readout speed EM Gain 4x EM-CCD Readout noise EM Gain 1200x (r.m.s.) (typ.) NORMAL-CCD Full well capacity (typ.) *3 Analog gain EM-CCD readout mode Gain conversion NORMAL-CCD factor (typ.) readout mode Forced air-cooled Cooling method / temperature Water-cooled *4 Forced air-cooled Temperature stability (-65 °C) Water-cooled (-80 °C) Forced air-cooled Dark current 6 (typ.) * (-65 °C) 7 Exposure time * Water-cooled (-80 °C) Internal sync mode External trigger mode A/D converter Output signal / External control Sub-array Binning 42 Hermetic vacuum-sealed air/water-cooled head *1 Anti-reflection (AR) coatings on both sides, single window Yes Electron Multiplier Back-thinned Frame transfer CCD 512 (H) × 512 (V) 16 µm (H) × 16 µm (V) 8.192 mm (H) × 8.192 mm (V) 11 MHz, 2.75 MHz, 0.69 MHz 2.75 MHz, 0.69 MHz 1x, 4x to 1200x *2 Photon imaging mode (1, 2, 3) 31.9 frame/s to 404.4 frame/s 417 frame/s (Binning option) 25 electrons (at 11 MHz) 20 electrons (at 2.75 MHz) 8 electrons (at 0.69 MHz) 1 electrons max. (at 11 MHz) 1 electrons max. (at 2.75 MHz) 1 electrons max. (at 0.69 MHz) 17 electrons (at 2.75 MHz) 8 electrons (at 0.69 MHz) 370 000 electrons (max. 800 000 electrons) 1/2 times to 5 times 5.8 electrons/count 1.4 electrons/count −65 °C stabilized (0 °C to + 30 °C) −80 °C stabilized (Water temperature: + 20 °C) −90 °C stabilized (Water temperature lower than 5 +10 °C) * ±0.03 °C (typ.) (Room temperature: stable at +20 °C) ±0.01 °C (typ.) (Water temperature: stable at +20 °C) [Operated with circulating water cooler] 0.01 electron/pixel/s 0.001 electron/pixel/s 30.5 ms or more 10 µs or more 16 bit CameraLink Every 16 lines (horizontal, vertical) size, position can be set (refer to the table on the right) 2×2, 4×4, (8×8, 16×16) *8 C9100-13 Ver.1.6 External synchronization *9 Trigger output *9 Image processing features (Real-time) EM gain protection EM gain readjustment Lens mount Edge trigger, Level trigger, Start trigger, Synchronous readout trigger Available (Delay and pulse length are variable) Background subtraction, Shading correction, Recursive filter, Frame averaging, Spot noise reducer *10 EM warning mode, EM protection mode Available C-mount ● Fastest readout speed; when Internal synchronization mode (typ.) Binning 1×1 2×2 4×4 8×8 16×16 512 31.9 60.9 112 177 248 256 59.6 107 178 252 313 Sub-array (Effective vertical width) 128 64 105 170 172 248 254 323 320 369 360 389 (Unit: frame/s) 32 245 318 373 401 405 16 315 370 405 417 413 The hermetic sealed head maintains a high degree of vacuum 10-8 Torr, without re-evacuation. Even with electron multiplier gain maximum, dark signal is kept low level at low light imaging. Linearity is not assured when full well capacity is more than 370 000 electrons. Water volume 1.2 liter/min. The maximum cooling temperature may vary subject to set-up environment. Typical thermal charge value (not guaranteed). Image smearing may appear when the exposure time is short. 8×8 and 16×16 binning are available on special order. Please consult with our sales office. Fastest readout speed is at 8×8 binning, sub-array 16. * 9 C-MOS 3.3 V with reversible polarity. * 10 Recursive filter, frame averaging, spot noise reducer cannot be used simultaneously. * * * * * * * * 1 2 3 4 5 6 7 8 • When the camera is used with water-cooling, confirm that water of 1.2 liter/min is always flowing. Note • For the details of the circulating water cooler, please see the instruction manual attached to the circulating water cooler. Note • Proper performance may not be achievable if a non-recommended circulating water cooler is used. (2) Power supply specifications Input power supply Frequency Power consumption Note AC 100 V to AC 240 V 50 Hz / 60 Hz Approx. 140 V·A • Fluctuations of input power supply voltages are not to exceed ± 10 % of the nominal voltage. (3) Operating environment Ambient operating temperature Performance guaranteed temperature Ambient storage temperature Ambient operating humidity Operating space Environment conditions 0 ºC to + 40 ºC 0 ºC to + 30 ºC -10 ºC to + 50 ºC 70 % , no condensation Indoor, altitude up to 2000 m Where there is no vibration, no corrosive gases and no dust 43 C9100-13 Ver.1.6 (4) Dimensional outlines and weight External dimensions Camera head Camera control unit Note Weight 110 mm (W) × 110 mm (H) × 213 mm (D) 232 mm (W) × 74 mm (H) × 308 mm (D) Approx. 3.7 kg Approx. 3.0 kg • Please see Chapter 14 [DIMENSIONAL OUTLINES] for detail of dimensions. (5) Applicable standards Safety EMC EN61010-1: 2001 Overvoltage category: Ⅱ Pollution degree: 2 Degree of protection (IEC60529): IP20 EN61326: 1997 + A1: 1998 + A2: 2001 + A3: 2003 Class A (6) Spectral response characteristics Following is the typical spectral characteristic of the CCD. 100 90 Quantum Efficiency (%) 80 70 60 50 40 30 20 10 0 400 500 600 700 Wave Length (nm) Fig. 13-1 44 800 900 1000 C9100-13 Ver.1.6 (7) EM gain Following is the setting value of SENSITIVITY and the typical EM gain. C9100-13 EM Gain 10000 EM Gain 1000 100 10 1 0 50 100 150 200 250 Sensitivity Fig. 13-2 45 C9100-13 Ver.1.6 13-2 INTERFACE SPECIFICATIONS 13-2-1 CAMERALINK INTERFACE SPECIFICATIONS CameraLink interface is a standard of a digital interface for industrial application standardized by digital camera manufactures and frame grabber board manufactures. 28 bits digital data (TX0 to TX27) can be transferred as being changed into 5 signals (X0, X1, X2, X3 and XCLK) by parallel serial transformation. This camera is based on CameraLink interface and Base Configuration 16 bit digital camera standard. (1) CameraLink connector pin assignments (MDR-26) Camera connector Frame grabber connector Channel Link signal 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 1 25 24 23 22 21 20 19 18 17 16 15 13 14 12 11 10 9 8 7 6 5 4 3 2 26 Inner Shield X0X1X2XclkX3SerTC+ SerTFGCC1CC2+ CC3CC4+ Inner Shield Inner Shield X0+ X1+ X2+ Xclk+ X3+ SerTCSerTFG+ CC1+ CC2CC3+ CC4Inner Shield Note 46 • CC2 to CC4 are not used in this system. C9100-13 Ver.1.6 (2) CameraLink bit assignments 28 bit Solution Pin Name Input Signal Name TX0 TX1 TX2 TX3 TX4 TX5 TX6 TX7 TX8 TX9 TX10 TX11 TX12 TX13 TX14 TX15 TX16 TX17 TX18 TX19 TX20 TX21 TX22 TX23 TX24 TX25 TX26 TX27 DB0 DB1 DB2 DB3 DB4 DB7 DB5 DB8 DB9 DB10 DB14 DB15 DB11 DB12 DB13 NC NC NC NC NC NC NC NC Spare LVAL FVAL DVAL DB6 ● DVAL (Data valid signal) This signal synchronizes in the image data from CCD, and it is outputted. Each digital data is effective with the period of “ON” of this signal. ● LVAL (Line valid signal) This signal shows the period during which the line part of the image data from the CCD is in effect. This is “ON” when during the period the line is active. ● FVAL (Frame valid signal) This signal shows the period during which the vertical part of the image data from the CCD is in effect. This is “ON” during the period the frame is active. ● DB0 to DB15 (Digital image data) This is the image signal data from the CCD converted A/D. DB0 is the LSB (least significant bit) and DB15 is the MSB (most significant bit). 47 C9100-13 Ver.1.6 13-2-2 TIMING I/O SPECIFICATIONS Output and input equivalent to timing I/O connector can be done in TIMING IN connector (TIMING IN 1) on camera control unit. Selection of Trigger In connector should be done by own application software. (1) Timing I/O connector pin assignments [TIMING I/O] The camera uses Hirose model HR10A-7R-6S connector for input and output signals. No. 1 Signal Trigger In 2 Digital GND 3 Integ Out 4 Digital GND 5 Programmable Timing Out 6 Digital GND Pin connections HR10A-7R-6S ● Trigger In: Input pin of the external trigger pulse ● Integ Out : Output pin of the integration timing signal ● Programmable Timing Out: Output pin of the timing signal synchronized with the exposure timing and set the delay time and the pulse width by the command. (2) Trigger In timing When the camera is set to external control mode, the camera accepts to input external trigger pulse. Its signal level is TTL level or C-MOS3.3V level (1KΩ termination) and the pulse polarity can be either positive or negative. The shortest pulse duration is 10us at edge trigger mode and synchronous readout mode and 790us at level trigger mode. The longest pulse duration is approximately 2 hours for any trigger mode. Normal operation is not guaranteed for any input signal other than these conditions. Additionally, refer to the frame rate table for the fastest repetition trigger pulse input. Normal operation is not guaranteed for any repetition input pulse faster than that of listed in the table. 48 C9100-13 Ver.1.6 ① Edge trigger mode (pulse polarity is positive) Trigger in cycle 10 µs min. Trigger In 780 µs typ. V-shift Exposure time Exposure Readout time Readout Trigger in cycle > V-shift time + Exposure time +V-shift time + Read out time In the Edge trigger mode, exposure time is set by the command. Fig. 13-3 ② Level trigger mode (pulse polarity is positive) Trigger in cycle 780 µs +Exposure time Trigger In 780 µs typ. V-shift Exposure time Exposure Readout time Readout Trigger in cycle > V-shift time + Exposure time +V-shift time + Read out time In the level trigger mode, exposure time is set by the width of Trigger In. Fig. 13-4 49 C9100-13 Ver.1.6 ③ Start trigger mode (pulse polarity is positive) Trigger in cycle 10 µs min. Trigger In 780 µs typ. V-shift Exposure time Exposure Readout time Readout Trigger in cycle > V-shift time + Exposure time +V-shift time + Read out time In the Edge trigger mode, exposure time is set by the command. Fig. 13-5 ④ Synchronous readout trigger mode (pulse polarity is positive) Trigger in cycle 10 µs min. Trigger In 780 µs typ. V-shift Exposure time Exposure Readout time Readout Trigger in cycle > V-shift time + Read out time Fig. 13-6 50 C9100-13 Ver.1.6 (3) Integ Out timing (pulse polarity is positive) The exposure-timing signal comes out. The signal level is C-MOS 3.3 V. +3.3 V 0V Exposure Exposure time Fig. 13-7 (4) Programmable Timing Out (pulse polarity is positive) This function offers freely programmable synchronization output, delay time, pulse width and trigger signal polarity. The output can be changed based on (3) Integ Out timing. The signal level is C-MOS 3.3 V. Integ Out Delay Pulse width Programmable Timing Out Fig. 13-8 • Control timing with the application software referring to its instruction manual. 51 C9100-13 Ver.1.6 14. DIMENSIONAL OUTLINE 14-1 CAMERA HEAD (Unit: mm) 185.5 ±2 27.5 8 55 ±1.5 110 ±1 110 ±1 1-32UN C-MOUNT D=5 78 ±1 40.5 ±0.5 1/4-20UNC, D=8 52 4-M3 バーリング C9100-13 Ver.1.6 14-2 CAMERA CONTROL UNIT 170 ±3 7 ±1 74 ±1 (Unit: mm) 232 ±3 23 ±1 260 ±3 308 ±3 53 C9100-13 Ver.1.6 15. WARRANTY Hamamatsu Photonics have fully inspected this system and checked that its performance conforms to specifications. In the unlikely event of breakdown or other malfunction, contact Hamamatsu subsidiary or local distributor. (1) Unless otherwise stated by Hamamatsu subsidiary or local distributor, this system is under warranty for 24 months from the delivery date. - Consumable parts, such as a fan, a mechanical shutter, and a fuse, are excepted. - Degradation with atomic rays, the radiation (X-rays, gamma rays, UV light, etc.) of CCD is excepted. (2) The warranty only covers defects in the materials and manufacturing of the system. You may be liable for repairs during the warranty period in the event of a natural disaster or if you handle the system contrary to the instructions in this manual, use it without due caution, or try to modify it. (3) We will repair the system or replace it, subject to availability, free of charge within the terms of the warranty. (4) HPK guarantees that the EM gain will not decrease by more than half of the maximum gain within 6 months. (5) We offer LIFETIME WARRANTY for the hermetically vacuum-shield head regarding vacuum leakage. However, following cases are exceptional to the LIFETIME WARRANTY. - Outgassing is under warranty for 12 months from the delivery date. - Peltier element deterioration is under warranty for 24 months from the delivery date. REPAIRS (1) If you notice anything wrong with the camera, confirm whether or not it is malfunctioning by referring to the troubleshooting checklist in this instruction manual. You must first clarify the symptoms in order to avoid any misunderstanding or error. (2) If you have any trouble or are unclear about anything, contact Hamamatsu subsidiary or local distributor giving the product name, serial number and details of the problem. If Hamamatsu Photonics consider the problem to be a malfunction, we will decide whether dispatch an engineer or have the camera returned to us for repairs. 54 C9100-13 Ver.1.6 16. CONTACT INFORMATION Japan HAMAMATSU PHOTONICS K. K., Systems Division 812 Joko-cho, Higashi-ku, Hamamatsu City, 431-3196, Japan Telephone (81) 53-431-0124, Fax: (81) 53-435-1574 E-mail: export@sys.hpk.co.jp U.S.A. and Canada Hamamatsu Corporation, Systems Division 360 Foothill Road, Bridgewater, N.J. 08807-0910, U.S.A. Telephone: (1)908-231-1116, Fax: (1)908-231-0852 E-mail: usa@hamamatsu.com Germany Hamamatsu Photonics Deutschland GmbH Arzbergerstr. 10, D-82211 Herrsching am Ammersee, Germany Telephone: (49) 8152-375-0, Fax: (49) 8152-265-8 E-mail: info@hamamatsu.de France Hamamatsu Photonics France S.A.R.L. 19, Rue du Saule Trapu, Parc du Moulin de Massy, 91882 Massy Cedex, France Telephone: (33) 1 69 53 71 00, Fax: (33) 1 69 53 71 10 E-mal: infos@hamamatsu.fr United Kingdom Hamamatsu Photonics UK Limited 2 Howard Court, 10 Tewin Road, Welwyn Garden City Hertfordshire AL7 1BW, United Kingdom Telephone: (44) 1707-294888, Fax: (44) 1707-325777 E-mail: info@hamamatsu.co.uk North Europe Hamamatsu Photonics Norden AB Smidesvagän 12, SE-171 41 Solna, Sweden Telephone: (46) 8-509-031-00, Fax: (46)8-509-031-01 E-mail: info@hamamatsu.se Italy Hamamatsu Photonics Italia S.R.L. Strada della Moia, 1/E 20020 Arese (Milano), Italy Telephone: (39) 02-935 81 733, Fax: (39) 02-935 81 741 E-mail: info@hamamatsu.it z The contents of this manual are subject to change without notice. z The unauthorized reproduction or distribution of parts or all of this manual is prohibited. z If one of the following problems occurs, please contact Hamamatsu Photonics. (See the CONTACT INFORMATION.) We will deal with the problem immediately. y Some contents of the manual are dubious, incorrect or missing. y Some pages of the manual are missing or in the wrong order. y The manual is missing or dirty. 55