J. Embryol. exp. Morph. 74, 297-309 (1983) 297 Printed in Great Britain © The Company of Biologists Limited 1983 X-chromosome instability in pluripotential stem cell lines derived from parthenogenetic embryos By E. J. ROBERTSON 1 , M. J. EVANS 1 AND M. H. KAUFMAN2 From the Departments of Genetics and of Anatomy, University of Cambridge SUMMARY The karyotype of six pluripotential stem cell lines derived from haploid and two additional lines derived from diploid parthenogenetic embryos is described. All these lines are diploid and possess a normal autosomal complement. The stage at which diploidization of the haploid cells occurs is not yet known. The XX-chromosome complement in these lines is unstable, although in two haploid-derived lines and one diploid-derived line many normal XX-bearing cells are found in early cultures. All of the lines so far examined either become XO (rarely), or a single X chromosome shows a deletion in the distal region. The extent of this deletion varies between lines, but the position of the breakpoint appears to be constant for a given line. We suggest that these cytogenetic findings raise the possibility that a single deletion event occurring at an early stage during the isolation of these lines may confer a selective advantage to those cells carrying the deleted X chromosome. INTRODUCTION Although many mouse embryonal carcinoma (EC) cell lines derived from teratocarcinomas maintain a near normal karyotype, few are euploid. Indeed, many have been found to be XO, and it has often been assumed that these were originally derived from XY lines in which the Y chromosome has been lost during their passage either in vivo or in vitro. Several apparently euploid female pluripotential lines have also been reported (Papaioannou, Evans, Gardner & Graham, 1979; McBurney & Strutt, 1980; Mintz & Cronmiller, 1981) and this has suggested that the XX constitution may be more stable than the XY. Recently, techniques have been described which allow stem cells to be isolated directly from mouse embryos (Evans & Kaufman, 1981; Martin, 1981). The principal advantage of these embryo-derived (EK) cell lines is that, in addition to their relative ease of isolation, they provide a source of pluripotential stem cell lines which, at least initially, have a karyotype which is identical to that of the embryo from which they are derived. Analysis of existing EK fertilized-derived cell lines has revealed that over 70% are karyotypically stable, and retain a 1 2 Authors' address: Department of Genetics, Downing Street, Cambridge, U.K. Author's address: Department of Anatomy, Downing Street, Cambridge, U.K. EMB74 298 E. J. ROBERTSON, M. J. EVANS AND M. H. KAUFMAN normal chromosome constitution (Robertson, Bradley, Evans & Kaufman, unpublished). In the present paper, we describe the analysis of six haploid-derived (HD lines) and two diploid-derived (DP lines) lines isolated from parthenogenetically activated eggs of both the 1-pronuclear (uniform haploid) and 2-pronuclear (heterozygous diploid) classes (Kaufman, 1981). In both the HD and DP lines the XX condition appeared to be unstable in the undifferentiated cell cultures. In one line only a single X chromosome was found in all spreads examined, and two other lines showed some cells with complete loss of one X chromosome. More frequently, a deletion of the distal segment of one of the X chromosomes was apparent. The extent of the deletion varied between lines, but remained constant within a given line. The XX constitution would appear to be unstable both in fertilized-derived and parthenogenetically-derived lines, but we have only observed the phenomenon of X deletion in the parthenogeneticallyderived cell lines. MATERIALS AND METHODS 1. Isolation and culture of parthenogenetically-derived lines Eggs from 8- to 12-week-old superovulated 129/Sv//Ev and (C57BL x CBA)Fi female mice were activated parthenogenetically following a brief exposure to 7 % ethanol in phosphate-buffered saline (PBS) (for details of the procedure, see Kaufman, 1982). Only those activated oocytes that had developed either a single pronucleus following second polar body extrusion (uniform haploid class, Kaufman, 1981), or two pronuclei in the absence of second polar body extrusion (heterozygous diploid class, Kaufman, 1981) were used subsequently. The Fi activated eggs were cultured in vitro to the expanded blastocyst stage. Because the 129/Sv//Ev activated eggs generally fail to progress in culture beyond the 2-cell stage, pronuclear eggs were transferred to the oviducts of recipients on the afternoon of the first day of pseudopregnancy (day 1 = day of finding vasectomized plug). The recipients were subsequently autopsied at about midday on day 4, by which time a high proportion of the transferred embryos had achieved the blastocyst stage. The haploid and diploid blastocysts were then treated in one of two ways. i. in vivo 'delay' Blastocysts were transferred to the uteri of ovariectomized recipients on day 3 of pseudopregnancy. While anaesthetized, the mice were injected with 1 mg of Depo-Provera. Autopsies were carried out after 3-6 days, and 'delayed' blastocysts recovered. The latter were explanted into tissue culture, and pluripotential -cell lines established from individual embryos. Details of the methodology involved have been described elsewhere (from fertilized embryos: Evans & Kaufman, X-chromosome instability in pluripotential cell lines 299 1981; from haploid parthenogenones: Kaufman, Robertson, Handyside & Evans, 1983). ii. direct in vitro culture A proportion of the expanded non-'delayed' blastocysts were briefly exposed to acid Tyrode's medium to remove the zona pellucida, then transferred into individual 1 cm wells (Nunc) containing a preformed feeder layer of inactivated fibroblasts (Martin & Evans, 1975), and DMEM medium (Gibco) supplemented with 10 % foetal calf serum, 10 % newborn calf serum, and 10~4M-2-mercaptoethanol. Blastocyst attachment occurred approximately 48 h after explantation. After an additional 4-day interval, the inner-cell-mass-derived cell clumps were selectively removed, trypsinized (0-25 % trypsin 1 0 ~ 4 M - E D T A in PBS) and replated onto feeder layers. The trypsinization and replating procedure was repeated after 4-6 days and, in successful cultures, nests of stem cells became visible shortly after this second passage (see Evans & Kaufman, 1981). All the EK cell lines were maintained exclusively on feeder layers as undifferentiated cultures and passaged at 4-5 day intervals by trypsinization. Cells were cultured on feeder layers in order to retain their differentiation ability (Hogan, 1976), and also to minimise alterations occurring in the chromosome complement (Magrane, 1982). Samples of culture populations were routinely frozen at intervals of two passage generations. 2. Chromosome analysis Karyotype analysis was carried out on well-established culture populations (usually after five to ten passages) in order to ensure that sufficient metaphase spreads were available for G-banding analysis to be performed. Exponentially-growing cell cultures were exposed to Colcemid (final concentration 0-02 meg/ml) for 50min. Cells were collected following trypsinization, incubated in hypotonic solution (0-075 M-KCI) for lOmin, pelleted by lowspeed centrifugation (500 r.p.m., 5 min) and fixed in 3:1 methanol: glacial acetic acid fixative. The latter was changed a further two times, and spreads prepared immediately by air drying. The G-banding technique used was a modification of that described for rat chromosomes by Gallimore & Richardson (1973). Slides were rinsed, air dried and examined under oil immersion (x650) using a Ziess photomicroscope. Between 30 and 60 intact G-banded metaphase spreads were analysed for each of the eight lines studied. In the better preparations an unambiguous identification of all of the chromosomes present could be made. The total number of chromosomes present was scored, and the morphological appearance of the X chromosomes determined. Selected metaphase spreads were photographed and karyograms constructed according to the nomenclature of Nesbitt & Erancke (1973). 22 XX 16 XX 6 XX 1 XX 6 XX del 9 12 XX del 3 ael xx 15 XO 7 XO 2 XO 3 X-chromosome constitution (metaphase scored) XX XX del XO * Cell lines obtained by direct culture method from the 1-cell stage. t H D 1 , H D 2 and H D 5 lines isolated from 129 S v / / E v strain embryos, all other lines from (C57BL x CBA)Fi 8 30 30 41 41 (73) *DP2 is 13 31 40 (58) *DP1 29 4 35 40 (83) *HD6 24 7 31 40 (77) HD5 57 2 60 40 (95) HD4 37 44 29 40 45 30 40 (93) 40 (98) 40 (97) HD1 HD2 HD3 Chromosome number 39 40 41 3 1 1 Total metaphases counted tCell line Modal number (percentage) Table 1. Chromosome analysis of EK cell lines derived from parthenogenetic embryos D en w ** v> O 2 § w o o w X-chromosome instability in pluripotential cell lines 301 RESULTS A total of six haploid-derived and two diploid-derived pluripotential lines have been isolated from parthenogenetic embryos. The origin, method of isolation and modal number of these lines are summarized in Table 1. 1. Lines derived from haploid parthenogenetic embryos Six parthenogenetically-derived lines have been established from the 1-pronuclear (haploid) class of embryos. These have been termed 'haploidderived' or HD lines. A summary of the detailed karyological analyses carried out on G-banded metaphase spreads collected from early passage cultures are presented in Table 1. All six lines were composed solely of diploid cells, and hence provide a source of completely homozygous diploid cell lines. The modal number of chromosomes in these lines was 40, with between 77-5 % and 98 % of cells possessing this count (Table 1). HDl HD5, HD6 HD2 HD3 HD4 Fig. 1. A schematic representation of an X chromosome (based on the nomenclature of Nesbitt & Francke, 1973) to illustrate the approximate position of the breakpoint for each of the HD cell lines. 302 E. J. ROBERTSON, M. J. EVANS AND M. H. KAUFMAN Between 10 and 30 spreads from each line were karyotyped, and all found to have a completely normal diploid autosomal complement. As the original haploid chromosome complement had been doubled, each cell would be expected to contain two identical X chromosomes. However, changes from the expected XX constitution were apparent in all lines. These changes fell into two groups: very occasionally, the cells had become XO following the loss of a single X chromosome, or, much more frequently, a deletion affecting the distal region of a single X chromosome had occurred. The presence of a partial deletion involving one of the X chromosomes was recorded in all six HD lines, whether they had originated from the 129/Sv//Ev or the Fi hybrid strain of mice, despite the fact that they had been isolated on separate occasions over a 9 month period. The position of the breakpoint differed considerably between lines, but appeared to be constant for a given line. A summary of the extent of the deleted segment in the various HD lines is presented in Fig. 1, and representative examples of XXdel-chromosome pairs from the various lines are illustrated in Fig. 2. The most extreme form of the deletion is seen in the HD1 line in which approximately 70 % of the chromosome is deleted, with only a small fragment of the X chromosome remaining beyond the centromere. The deletion is least pronounced in the HD4 and HD5 lines in which the deletion involves approximately 35 % and 40 % of the total length of the X chromosome, respectively. In three of the lines, metaphases were found in which two apparently normal intact X chromosomes were present. These were present in low numbers in the HD5 line (3 out of 12 metaphases scored), and HD6 line (1 out of 13 metaphases scored), but present in approximately half of the cells of the HD4 line (16 out of 31 metaphases scored). I" HD1 HD2 -.5 i> II M i HD3 HD4 HD4 HD5 1 HD6 • Fig. 2. X deletion in haploid-derived cell lines. Examples of pairs of G-banded X chromosomes from the HD cell lines. X-chromosome instability in pluripotential cell lines 303 The only haploid-derived line in which XO cells were recorded was the HD5 line (3 out of 12 metaphases scored). Thus, in all of the lines studied, the majority of cells possessed an XXdel genotype (Table 1). All HD lines retained a normal diploid autosomal component. Figure 3 gives a karyogram from the HD5 cell line, which is of 129/Sv//Ev origin, to illustrate the possession a normal euploid chromosome complement. 2. Lines derived from diploid parthenogenetic embryos Two parthenogenetically-derived stem cell lines have been isolated from the 2-pronuclear class of embryos. These lines differ from the haploid-derived lines in that they contain heterozygous rather than homozygous diploid cells. Details of their karyotype analysis are presented in Table 1. Both lines appear to have an unstable XX constitution. The DPI line possesses a normal diploid autosomal complement but has a bimodal chromosome count with approximately equal numbers of cells containing 39 and 40 chromosomes. This is due to the presence of both XO- and XX-genotype cells in the culture population (see Table 1). A karyogram illustrating the XX genotype is given in Fig. 4A. No partial deletion involving one X chromosome was observed in this line. The DP2 line possesses cells containing either 40 or 41 (73 % of spreads) I) if I! M II *« II H K 1 18 M HD5 Fig. 3. A G-banded karyogram from the HD5 cell line (129/Sv//Ev origin) to show a normal euploid chromosome complement. 304 E. J. ROBERTSON, M. J. EVANS AND M. H. KAUFMAN chromosomes. G-banding revealed that all spreads were trisomic for chromosome 11. Cells of XO, XX and XXdel genotype were recorded, though the majority of cells was characterized by the possession of an XXdel genotype, in which approximately 70 % of the material of one of the X chromosomes was lost. A representative karyogram for this line is presented in Fig. 4B. DISCUSSION This paper is the second in a series in which the establishment and properties III * 5 If * * • • • • !r*-: iif 4 • t t mm m * V ft M ft •• fc *» f* «t DPI Fig. 4. Karyograms from the DP lines. (A) DPI. Normal diploid complement. (B) DP2. The cell line is characterized by possession of trisomy 11 (recorded in all metaphase spreads examined). This particular metaphase spread illustrates the extent of the deletion of a single X chromosome found in this cell line. X-chromosome instability in pluripotential cell lines 305 of parthenogenetically-derived pluripotential cell lines are presented. In the first paper (Kaufman etal. 1983), details of the establishment of lines HD1, 2, 3 and 4 from 'delayed' blastocysts were presented, as well as preliminary observations on their properties when allowed to differentiate in vivo and in vitro. Minimal information was provided on the cytogenetic findings, as these had yet to be investigated in detail. In the present paper, an attempt has been made to clarify this aspect, with the presentation of details of the karyological analysis of the original four HD lines, as well as two additional HD lines (HD5 and HD6), and two diploid-derived lines (DPI and DP2). However, before discussing the cytogenetic findings in detail, we believe it worth stressing the fact that, contrary to our previous report (Evans & Kaufman, 1981) and also to the findings of Martin (1981) it is now possible to establish stem cell lines directly from normal non-'delayed' blastocysts in the absence of teratocarcinoma-conditioned medium: lines HD6, DPI and DP2, for example, as well as various fertilized-derived lines (authors, unpublished) were established in serum-containing tissue-culture medium from embryos that had been maintained completely in vitro from the 1-cell stage onwards. Thus, while the enlarged inner-cell-mass-derived component present in 'delayed' blastocysts, and appropriately 'conditioned' medium may both facilitate the isolation of EK pluripotential lines, they are not necessary. 'A ii H M < ti It U M «* DP2 Fig. 4B II #1* 306 E. J. ROBERTSON, M. J. EVANS AND M. H. KAUFMAN It is also of interest that the EK cell lines derived from normal non-'delayed' blastocysts seem to be indistinguishable from those obtained from 'delayed' blastocysts. Similarly, EK lines derived from parthenogenetic material were indistinguishable from pluripotent cell lines established from teratocarcinomas (see Evans & Kaufman, 1981; Kaufman et al. 1983). Apart from confirming our previous finding (Evans & Kaufman ,1981) that the autosomal complement of EK cells is apparently quite normal, the present study has revealed that, contrary to expectation, the X-chromosome complement in parthenogenetically-derived pluripotent lines does not appear to be stable. Possibly of greatest interest is the observation that in all of the lines so far studied, a partial deletion involving one of the X chromosomes manifests itself in the lines established from both haploid- and diploid-derived parthenogenetic material. Whereas both groups appear to form stable diploid lines, the former are genetically homozygous, while the latter group - which form from embryos which retain both products of the second meiotic division - are likely to be progressively more heterozygous at loci increasingly distal from the centromere (Eicher, 1978). In the most extreme cases, both in the HD and DP lines, an entire X chromosome is lost from the complement, resulting in the production of an XO line. While the complete loss of an X chromosome was only rarely encountered in most of the parthenogenetically-derived lines studied, the presence of a partial deletion of one of the X chromosomes occurred regularly. While X-inactivation occurs apparently normally both within the embryo (Kaufman, Guc-Cubrilo & Lyon, 1978) and in the extraembryonic membranes (Rastan, Kaufman, Handyside & Lyon, 1980) in heterozygous diploid parthenogenones, no information appears to be available on X-chromosome activity in homozygous diploid embryos. There is considerable evidence that both X chromosomes are active during early development of female mouse embryos (reviewed by Gartler & Cole, 1981) and this has also been shown to be the case in some XX EC cell lines (Martin et al. 1978; McBurney & Strutt, 1980). Presumably both X chromosomes are also active in XX EK cell lines and indeed in such lines no differential Kanda staining was observed (unpublished observations A. Stoker). Although no biochemical information is yet available on X-chromosome activity in the various parthenogenetically-derived EK lines considered here, there seems no a priori reason why the X chromosomes should behave differently from the situation observed in the tumour-derived EC cells. The female mammal has twice the relative dose of X-linked to autosomal genes of the male, and X-inactivation provides a mechanism of dosage compensation. That there is a dosage imbalance in XX EC cells is born out by the observations of a double specific activity of X-linked enzymes in these cells (Martin et al. 1978; see also Epstein, Travis, Tucker & Smith, 1978; Monk, 1978). This is to be expected as the cell phenotype is of an early embryo epiblast cell. All X-linked products are, therefore, overproduced and these cells are in X-chromosome instability in pluripotential cell lines 307 a state of imbalance. Despite this, XX cells not only grow through this stage of development, but may be isolated and maintained as progressively growing cultures of EK cells. Analysis of 21 EK cell lines derived from fertilized embryos shows that 15 of these are karyotypically normal (authors' unpublished results). To date we have not observed the loss of a Y chromosome from the 12 XY lines available, however the loss of an entire X chromosome has been observed in two of the three (otherwise euploid) XX lines studied with the consequent production of both XX and XO cells in these cultures. Whilst it is clear, therefore, that XX lines can give rise to XO cells, we have not yet observed a partial deletion of an X chromosome in any fertilized-derived EK cell line nor has this phenomenon been reported to occur in any established EC cell line. It is perhaps relevant that a number of established EC cell lines (which have been derived from tumours made by ectopic transplantation of early embryos) are XO. While it has usually been assumed that these arose from XY lines due to the loss of the Y chromosome, this preliminary EK evidence suggests that this is perhaps more likely to be due to the loss of an X chromosome. Conceivably, in contrast to an XX EK line with both X chromosomes active, an XY EK cell line is carrying little redundant metabolic burden from the small Y chromosome. The reason why XO lines are found to arise more frequently from XX than from XY lines could thus be that the removal of one redundant X chromosome confers a more significant growth advantage on the cell relative to its XX progenitors. It is noticeable that those long-established EC cell lines which do possess two X chromosomes also have an increased number of autosomes (McBurney & Adamson, 1976; Martin et al. 1978) and some tend not to be pluripotential (e.g. Nulli SCC2A, E. J. Robertson, unpublished results). Possibly the fact that in most teratocarcinomas one of the X's is maternally derived and the other paternally derived has some effect on their inactivation during early cellular differentiation (as is known to be the case in the normal embryo, West, Frels, Chapman & Papaioannou, 1977; Harper, Fosten & Monk, 1982). Their parental origin may also in some way influence the loss of one or the other X chromosome in the undifferentiated state. Clearly, this cannot be the case in the parthenogenones, where both X's are of maternal origin. Although a variety of breakpoints are observed in the different parthenogenetically-derived lines studied here, it is unclear at the present time whether a progressive loss of the distal segment occurs, with the eventual production of an XO line. The uniform state of the deleted segment in each of the lines so far examined, however, would suggest that this is not the case, but even in the most well-established lines, cells from only relatively early passages have been examined. This is in marked contrast to the situation observed in many EC lines in which cells may have passed through hundreds of generations both as in vivo tumours and in subsequent growth in vitro. The latter situation would certainly tend to favour the selective overgrowth and survival of the cells with the most 308 E. J. ROBERTSON, M. J. EVANS AND M. H. KAUFMAN stable genotype. Indeed, time alone will tell whether the XXdel genotype observed in these lines represents an early stage in the production of the (possibly) more stable XO genotype. If a variety of distal Xdel conditions are sufficient to confer the postulated growth advantage on the cell it suggests that either the most serious imbalance is due to loci which map at the distal region of the X chromosome, or that deletion of this region removes a controlling locus which affects the activity of the rest of the chromosome. It would be interesting to discover if the Xdel chromosome is active in these cells. Whatever the cause and mechanism, a series of X-chromosome deletions are now available, and it seems likely that many more of these apparently randomlyoccurring deletions could be produced. These may be extremely useful for genetic mapping of the X chromosome. If the XXdel chromosomes remain active, the relative specific activities of X-linked enzymes in XX, XXdel and XO cells, which are identical in all other respects, should provide mapping information. 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