Publications on the use of MicroSys (1999 – July 2016)

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Publications on the use of MicroSys (1999 – July 2016)
2016
Screening of Pre-miRNA-155 Binding Peptides for Apoptosis Inducing Activity Using Peptide
Microarrays.
Jaeyoung Pai, Soonsil Hyun, Ji Young Hyun, Seong-Hyun Park, Won-Je Kim, Sung-Hun Bae, NakKyoon Kim, Jaehoon Yu, and Injae Shin.
Journal of the American Chemical Society, 27 January 2016; 138(3): 857-867. (MicroSys 5100)
Enzymatic and Structural Characterization of the Major Endopeptidase in the Venus Flytrap
Digestion Fluid.
Michael W. Risør, Line R. Thomsen, Kristian W. Sanggaard, Tania A. Nielsen, Ida B. Thøgersen,
Marie V. Lukassen, Litten Rossen, Irene Garcia-Ferrer, Tibisay Guevara, Carsten Scavenius, Ernst
Meinjohanns, F. Xavier Gomis-Rüth and Jan J. Enghild
Journal of Biological Chemistry, 29 January 2016; 291(5): 2271-2287.
Carbohydrate microarrays for screening functional glycans.
Jaeyoung Pai, Ji Young Hyun, Jieun Jeong, Sohee Loh, Eun-Hee Cho, Young-Sun Kang, Injae Shin.
Chemical Science, 1 March 2016; 7(3): 2084-2093. (MicroSys 5100)
http://pubs.rsc.org/en/content/articlepdf/2016/sc/c5sc03789a?page=search
Development of Novel Technologies for Direct Cellular Patterning for the Establishment of
Well Controlled Microenvironments to Facilitate Studies on Cellular Signaling, Sensing, and
Other Diffusion-Based Phenomena
William Hynes
PhD Theses, 7 May 2016; SUNY Polytechnic Institute, 133 pp (MicroSys 5100 4SQ)
https://dspace.sunyconnect.suny.edu/bitstream/handle/1951/66926/HynesDissertation.pdf?sequence=1&isAllowed=y
Hybrid microarray based on double biomolecular markers of DNA and carbohydrate for
simultaneous genotypic and phenotypic detection of cholera toxin-producing Vibrio cholerae.
Hwa Hui Shin, Jeong Hyun Seo, Chang Sup Kim, Byeong Hee Hwang, and Hyung Joon Cha.
Biosensors and Bioelectronics, 15 May 2016; 79: 398-405. (MicroSys 5100)
Structure of the I-SceI nuclease complexed with its dsDNA target and three catalytic metal
ions.
Jesús Prieto, Pilar Redondo, Nekane Merino, Maider Villate, Guillermo Montoya, Francisco J.
Blanco, and Rafael Molina.
Acta Crystallographica Section F: Structural Biology Communications, 1 June 2016; 72(6): 473-479.
https://www.researchgate.net/profile/Rafael_Molina4/publication/303502251_Structure_of_the_ISceI_nuclease_complexed_with_its_dsDNA_target_and_three_catalytic_metal_ions/links/5746f6ad0
8ae9f741b452a11.pdf
Structural mimicry of receptor interaction by antagonistic IL-6 antibodies.
Christophe Blanchetot, Natalie De Jonge, Aline Desmyter, Nico Ongenae, Erik Hofman, Alex
Klarenbeek, Ava Sadi, Anna Hultberg, Anke Kretz-Rommel, Silvia Spinelli, Remy Loris, Christian
Cambillau and Hans de Haard
Journal of Biological Chemistry, 24 June 2016; 291(26): 13846-13854 (MicroSys SQ)
http://www.jbc.org/content/291/26/13846.full.pdf
2015
A novel mechanism of latency in matrix metalloproteinases.
Mar López-Pelegrín, Miroslaw Ksiazek, Abdulkarim Y. Karim, Tibisay Guevara, Joan L. Arolas, Jan
Potempa & F. Xavier Gomis-Rüth
Journal of Biological Chemistry, 2 January 2015; jbc-M114.605956
http://www.jbc.org/content/early/2015/01/02/jbc.M114.605956.full.pdf+html
Method of making a hydrogel.
Inventors: Catherine Louise Ruby Merry, Alberto Saiani, Kate Alexandra Meade, Emma Tranquility
Lowe, Aline Fiona Saiani, and Jean-Baptiste Guilbaud.
U.S. Patent Application: 2015/0030681 A1, Publication Date: 29 January 2015 (MicroSys 5100 4SQ)
https://www.google.com/patents/US20150030681
A novel mechanism of latency in matrix metalloproteinases.
Mar López-Pelegrín, Miroslaw Ksiazek, Abdulkarim Y. Karim, Tibisay Guevara, Joan L. Arolas, Jan
Potempa, and F. Xavier Gomis-Rüth.
Journal of Biological Chemistry, 20 February 2015; 290(8): 4728-4740. (MicroSys 4000XL)
http://www.jbc.org/content/290/8/4728.full
Development of a high-throughput screen for the identification of novel antifungal drug
candidates.
Inventors: Anand K. Ramasubramanian, Jose L. Lopez-Ribot, Anand Srinivasan, and Priya Uppuluri.
United States Patent: US 8962531 B2, Publication Date: 24 February 2015.
https://www.google.com/patents/US8962531
Multicolored silver nanoparticles for multiplexed disease diagnostics: distinguishing dengue,
yellow fever, and Ebola viruses.
Chun-Wan Yen, Helena de Puig, Justina O. Tam, José Gómez-Márquez, Irene Bosch, Kimberly
Hamad-Schifferli, and Lee Gehrke.
Lab on a Chip, 7 April 2015; 15(7): 1638-1641.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375736/
IL-6 binding molecules.
Inventors: Christophe Blanchetot, Johannes De Haard, Torsten Dreier, Natalie De Jonge, Woning
Paul Sebastian Van Der, and Nicolas Ongenae.
U.S. Patent Application: 2015/0140011 A1, Publication Date: 21 May 2015; (MicroSys SQ)
http://www.freepatentsonline.com/y2015/0140011.html
Validation of a Combinatorial Approach Toward the Discovery of Electrolyte Formulations for
Lithium-Ion Batteries
Zhange Feng, Charles A. Cartier, and Daniel Scherson.
In: The Electrochemical Society, Meeting Abstracts, 26 May 2015; 2: 413.
http://ma.ecsdl.org/content/MA2015-01/2/413.short
A C-type lectin isolated from the skin of Japanese bullhead shark (Heterodontus japonicus)
binds a remarkably broad range of sugars and induces blood coagulation.
Shigeyuki Tsutsui, Yuma Dotsuta, Ayaka Ono, Masanari Suzuki, Hiroaki Tateno, Jun Hirabayashi,
and Osamu Nakamura.
Journal of Biochemistry, May 2015; 157(5): 345-356. (MicroSys4000)
Microbial testing devices, methods of making microbial testing devices and methods of
identifying novel antimicrobial drug candidates.
Inventors: Anand K. Ramasubramanian, Jose L. Lopez-Ribot, and Anand Srinivasan.
U.S. Patent Application: 2015/0167046 A1, Publication Date: 18 June 2015;
https://www.google.com/patents/US20150167046
Thermal Reaction Device and Method for Using the Same.
Inventors: Marc A. Unger, Lincoln McBride, and Geoffrey Facer.
U.S. Patent Application: 20150174575 A1, Publication Date: 25 June 2015; (MicroSys5100)
https://www.google.com/patents/US20150174575
Structure and mechanism of a bacterial host-protein citrullinating virulence factor,
Porphyromonas gingivalis peptidylarginine deiminase.
Theodoros Goulas, Danuta Mizgalska, Irene Garcia-Ferrer, Tomasz Kantyka, Tibisay Guevara, Borys
Szmigielski, Aneta Sroka, Claudia Millán, Isabel Usón, Florian Veillard, Barbara Potempa, Piotr
Mydel, Maria Solà, Jan Potempa & F. Xavier Gomis-Rüth
Scientific Reports, 1 July 2015; 5: 11969, 17 pp. (MicroSys4000XL)
http://www.nature.com/articles/srep11969?WT.ec_id=SREP-63120150707&spMailingID=49041640&spUserID=ODkwMTM2NjQzMAS2&spJobID=720800260&s
pReportId=NzIwODAwMjYwS0
A Combinatorial Approach toward the Discovery of Electrolyte Formulations for Non-Aqueous
Electrochemical Energy Storage Devices.
Charles Cartier, Zhange Feng, Jim Faulk, and Daniel Scherson.
ECS Electrochemistry Letters, 16 July 2015; 4(9): A110-A114.
http://eel.ecsdl.org/content/4/9/A110.full.pdf+html
Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes,
providing for a powerful therapeutic antibody platform.
Alex Klarenbeek, Khalil El Mazouari, Aline Desmyter, Christophe Blanchetot, Anna Hultberg,
Natalie de Jonge, Rob C. Roovers, Christian Cambillau, Sylvia Spinelli, Jurgen Del-Favero, Theo
Verrips, Hans J de Haard, and Ikbel Achour
MAbs, July-August 2015; 7(4): 693-706. (MicroSys SQ)
http://europepmc.org/articles/pmc4622956
Crystal structure of human platelet phosphofructokinase-1 locked in an activated
conformation.
Marco Kloos, Antje Brüser, Jürgen Kirchberger, Torsten Schöneberg, and Norbert Sträter.
Biochemical Journal, 1 August 2015; 469(3): 421-432.
Microfluidic assay devices and methods.
Inventors: Hany Ramez Nassef, Hou-Pu Chou, Michael Lucero, Andrew May, and Kathy Yokobata.
United States Patent: US 9103825 B2, Publication Date: 11 August 2015. (MicroSys 5100)
https://www.google.com/patents/US9103825
Crystal structure of insulin-regulated aminopeptidase with bound substrate analogue provides
insight on antigenic epitope precursor recognition and processing.
Anastasia Mpakali, Emmanuel Saridakis, Karl Harlos, Yuguang Zhao, Athanasios Papakyriakou,
Paraskevi Kokkala, Dimitris Georgiadis, and Efstratios Stratikos.
The Journal of Immunology, 15 September 2015; 195(6): 2842-2851. (MicroSys4000)
A Combinatorial Approach toward the Discovery of Electrolyte Formulations for Non-Aqueous
Electrochemical Energy Storage Devices.
Charles Cartier, Zhange Feng, Jim Faulk, and Daniel Scherson.
ECS Electrochemistry Letters, September 2015; 4(9): A110-A114.
http://eel.ecsdl.org/content/4/9/A110.full
Structure and binding properties of a cameloid nanobody raised against KDM5B.
Anders Wiuf, Line Hyltoft Kristensen, Ole Kristensen, Jerzy Dorosz, J. Jensen, and M. Gajhede.
Acta Crystallographica, F: Structural Biology Communications, 1 October 2015; 71(10): 1235-1241.
Structure of RagB, a major immunodominant outer-membrane surface receptor antigen of
Porphyromonas gingivalis.
T. Goulas, I. Garcia-Ferrer, J. A. Hutcherson, B. A. Potempa, J. Potempa, D. A. Scott, and F. Xavier
Gomis-Rüth.
Molecular Oral Microbiology, 6 October 2015; published ahead of print (MicroSys 4000XL)
Structure and binding properties of a cameloid nanobody raised against KDM5B.
Anders Wiuf, Line Hyltoft Kristensen, Ole Kristensen, Jerzy Dorosz, Jonas Jensen, and Michael
Gajhede.
Acta Crystallographica Sec. F: Structural Biology Commns, October 2015; 71(10): 1235-1241.
Biomolecule interaction using atomic force microscope.
Inventors: Joon Won Park, Yu Jin Jung, Bong Jin Hong, Saul Tendler, and Stephanie Allen.
United States Patent: US 9175335 B2, Publication Date: 3 November 2015; (MicroSys 5100)
https://www.google.com/patents/US9175335
Mechanisms of proteolytic activity regulation exerted via a unique propeptide in matrix
metalloproteinases and intra/intermolecular interactions in a novel family of minimal
gluzincins.
Maria del Mar López Pelegrín
PhD Theses, 13 November 2015; Universitat de Barcelona, 171 pp. (MicroSys 4000XL)
http://www.tdx.cesca.cat/handle/10803/347212
Size-controlled macromolecule.
Inventors: Joon Won Park, Bong Jin Hong, Young Seo Choi, Soon Jin Oh, and Kwan Yong Choi.
United States Patent: US 9201067 B2, Publication Date: 1 December 2015 (MicroSys 5100).
https://www.google.com/patents/US9201067
Structure of RagB, a major immunodominant outer-membrane surface receptor antigen of
Porphyromonas gingivalis.
Theodoros Goulas, Irene Garcia Ferrer, Justin A. Hutcherson, Barbara A. Potempa, Jan Potempa,
David A. Scott, and F. Xavier Gomis-Rüth.
Molecular oral Microbiology, 2015; ahead of print. (MicroSys 4000XL)
A Hard Pill to Swallow: Viable Regulation of 3-D Printed Pharmaceuticals
Victoria R. Graf
Albany Law Journal of Science and Technology, 2015; 25: 593.
2014
Expression, purification, crystallization and preliminary X-ray diffraction analysis of the novel
modular DNA-binding protein BurrH in its apo form and in complex with its target DNA.
Stefano Stella, Rafael Molina, Claudia Bertonatti, Alexandre Juillerrat, and Guillermo Montoya.
Acta Crystallographica Section F: Structural Biology Communications, January 2014; 70(1): 87-91.
http://journals.iucr.org/f/issues/2014/01/00/bo5131/index.html
Polynucleotide synthesis on a modified surface.
Inventors: Joon-Won Park, and Bong-Jin Hong.
United States Patent: US 8647823 B2, Publication Date: 11 February 2014; (MicroSys 5100)
https://www.google.com/patents/US8647823
Drug susceptibility of matrix-encapsulated Candida albicans nano-biofilms.
Anand Srinivasan, Celia Macias Gupta, C. Agrawal, Kai P. Leung, Jose L. Lopez-Ribot, and Anand
K. Ramasubramanian.
Biotechnology and Bioengineering, February 2014; 111(2): 418-424
http://www.researchgate.net/profile/Anand_Ramasubramanian/publication/257648438_Drug_suscept
ibility_of_matrix-encapsulated_Candida_albicans_nanobiofilms/links/02e7e537288cdc95eb000000.pdf
Crystallization and preliminary X-ray diffraction analysis of the homing endonuclease I-CvuI
from Chlorella vulgaris in complex with its target DNA.
Pilar Redondo, Nekane Merino, Maider Villate, Francisco J. Blanco, Guillermo Montoya, and Rafael
Molina.
Acta Crystallographica Sect. F: Structural Biology Communications, February 2014; 70(2): 256-259.
http://www.researchgate.net/profile/Rafael_Molina4/publication/259752645_Crystallization_and_pre
liminary_X-ray_diffraction_analysis_on_the_homing_endonuclease_of_Chlorella_vulgaris_ICvuI_in_complex_with_its_target_DNA/links/0f31752ea2ecf01d73000000.pdf
Printing and encapsulation of electrical conductors on polylactic acid (PLA) for sensing
applications.
Andres Vasquez Quintero, Nathalie Frolet, Daniel Marki, Alexis Marette, Giorgio Mattana, Danick
Briand, and Nico F. de Rooij.
In: Micro Electro Mechanical Systems (MEMS), 2014 IEEE 27th International Conference, February
2014; pp. 532-535.
Biomolecule interaction using atomic force microscope.
Inventors: Joon Won Park, Yu Jin Jung, Bong Jin Hong, Saul Tendler, and Stephanie Allen.
United States Patent: US 8673621 B2, Publication Date: 18 March 2014; (MicroSys 5100)
https://www.google.com/patents/US8673621
A Rapid, Direct, Quantitative, and Label-Free Detector of Cardiac Biomarker Troponin T
Using Near-Infrared Fluorescent Single-Walled Carbon Nanotube Sensors.
Jingqing Zhang, Sebastian Kruss, Andrew J. Hilmer, Steven Shimizu, Zeke Schmois, Flor De La
Cruz, Paul W. Barone, Nigel F. Reuel, Daniel A. Heller, and Michael S. Strano.
Advanced Healthcare Materials, March 2014; 3(3): 412-423
Purification, crystallization and preliminary X-ray diffraction analysis of the kinase domain of
human tousled-like kinase 2.
Ana M. Garrote, Pilar Redondo, Guillermo Montoya, and Inés G. Munoz.
Acta Crystallographica Section F: Structural Biology Communications, March 2014; 70(3): 354-357.
http://journals.iucr.org/f/issues/2014/03/00/rl5059/index.html
Crystallization and preliminary crystallographic analysis of human muscle
phosphofructokinase, the main regulator of glycolysis.
Marco Kloos, A. Bruser, Juergen Kirchberger, T. Schoneberg, and N. Strater.
Acta Crystallographica Section F: Structural Biology Communications, May 2014; 70(5): 578-582.
Purification, crystallization and preliminary X-ray diffraction analysis of GatD, a glutamine
amidotransferase-like protein from Staphylococcus aureus peptidoglycan.
Diana Vieira, Teresa A. Figueiredo, Anil Verma, Rita G. Sobral, Ana M. Ludovice, Herminia de
Lencastre, and Jose Trincao.
Acta Crystallographica Section F: Structural Biology Communications, May 2014; 70(5): 632-635
Structure of the epimerization domain of tyrocidine synthetase A.
Stefan A. Samel, Paul Czodrowski, and L-O. Essen.
Acta Crystallographica Section D: Biological Crystallography, May 2014; 70(5): 1442-1452.
(MicroSys 4004)
The crystal structure of a Cardiovirus RNA-dependent RNA polymerase reveals an unusual
conformation of the polymerase active site.
Laia Vives-Adrian, Celia Lujan, Baldo Oliva, Lonneke van der Linden, Barbara Selisko, Bruno
Coutard, Bruno Canard, Frank JM van Kuppeveld, Cristina Ferrer-Orta, and Núria Verdaguer.
Journal of Virology, May 2014; 88(10): 5595-5607. (MicroSys 4000 XL)
http://jvi.asm.org/content/88/10/5595.full
Microfluidic Devices And Methods Of Using Same
Inventors: Lincoln Mcbride, Michael Lucero, Marc Unger, Hany Ramez Nassef, Geoffrey Facer
European Patent: EP 1 615 721 B1, Publication Date: 18 June 2014; (MicroSys 5100)
http://www.google.com/patents/EP1615721B1?cl=deFl
Expression and purification of integral membrane metallopeptidase HtpX.
Joan L. Arolas, Raquel García-Castellanos, Theodoros Goulas, Yoshinori Akiyama, and F. Xavier
Gomis-Rüth.
Protein Expression and Purification, July 2014; 99: 113-118. (MicroSys 4000 XL)
http://digital.csic.es/bitstream/10261/101844/1/Arolas_PEP_2014_corrMs.pdf
Lectin-Microarray Technique for Glycomic Profiling of Fungal Cell Surfaces.
Azusa Shibazaki, and Tohru Gonoi.
Methods in Molecular Biology, July 2014; 1200 (Lectins): 287-294. (MicroSys 4000)
Directed Evolution of Lectins by an Improved Error-Prone PCR and Ribosome Display
Method.
Dan Hu, Hiroaki Tateno, and Jun Hirabayashi.
Methods in Molecular Biology, July 2014; 1200 (Lectins): 527-538. (MicroSys 4000)
Multiple stable conformations account for reversible concentration-dependent oligomerization
and autoinhibition of a metamorphic metallopeptidase
Mar López-Pelegrín, Núria Cerdà-Costa, Anna Cintas-Pedrola, Fátima Herranz-Trillo, Pau Bernadó,
Juan R. Peinado, Joan L. Arolas, and F. Xavier Gomis-Rüth
Angewandte Chemie Int Ed Engl., 26 September 2014; 53(40): 10624-10630 (MicroSys 4000XL)
http://digital.csic.es/bitstream/10261/124304/4/LopezPelegrin_ACIE_manus%2Bsuppl_rev3.pdf
Structure and Mechanism of Cysteine Peptidase Gingipain K (Kgp), a Major Virulence Factor
of Porphyromonas gingivalis in Periodontitis.
Iñaki de Diego, Florian Veillard, Maryta N. Sztukowska, Tibisay Guevara, Barbara Potempa, Anja
Pomowski, James A. Huntington, Jan Potempa, and F. Xavier Gomis-Rüth.
Journal of Biological Chemistry, 29 September 2014; 289(46): 32291-32302. (MicroSys 4000 XL)
Biomolecule Interaction Using Atomic Force Microscope.
Inventors: Joon Won Park, Yu Jin Jung, Bong Jin Hong, Saul Tendler, and Stephanie Allen.
US Patent Application: 2014/0315319 A1, Publication Date: 23 October 2014. (MicroSys 5100)
http://www.freepatentsonline.com/y2014/0315319.html
A C-type lectin isolated from the skin of Japanese bullhead shark (Heterodontus japonicus)
binds a remarkably broad range of sugars and induces blood coagulation.
Shigeyuki Tsutsui, Yuma Dotsuta, Ayaka Ono, Masanari Suzuki, Hiroaki Tateno, Jun Hirabayashi,
and Osamu Nakamura.
Journal of Biochemistry, 29 November 2014; 10-1093/jb/mvu080. (MicroSys 4000)
2013
Microfluidic device and methods of using same.
Inventors: Marc A. Unger, Ian David Manger, Michael Lucero, Yong Yi, Emily Miyashita-Lin, Anja
Wienecke, Geoffrey Facer
European Patent: EP1463796 B1, Publication Date: 9 January 2013
http://www.freepatentsonline.com/EP1463796.html
Size-controlled macromolecule.
Inventors: Joon Won Park, Bong Jin Hong, Young Seo Choi, Soon Jin Oh, Kwan Yong Choi
European Patent: EP1664341 B1, Publication Date: 30 January 2013
http://www.freepatentsonline.com/EP1664341.html
Non-fouling polymeric surface modification and signal amplification method for biomolecular
detection.
Inventor: Ashutosh Chilkoti
United States Patent: US 8367314 B2, Publication Date: 5 February 5 2013; (MicroSys 5100)
https://www.google.com/patents/US8367314
Development of a high-throughput screen for the identification of novel antifungal drug
candidates
Inventors: Anand K. Ramasubramanian, Jose L. Lopez-Ribot, Anand Srinivasan, Priya Uppuluri,
US Patent Application: 20130040854 A1, Publication Date: 14 February 2013
http://www.freepatentsonline.com/y2013/0040854.html
Crystallization and preliminary X-ray analysis of membrane-bound
pyrophosphatases.
Juho Kellosalo, Tommi Kajander, Riina Honkanen, and Adrian Goldman.
Molecular Membrane Biology, February 2013; 30(1): 64-74.
Structural analysis of coniferyl alcohol 9-O-methyltransferase from Linum nodiflorum reveals a
novel active-site environment.
Stefan Wolters, Manuel Neeb, Anna Berim, J. Schulze Wischeler, M. Petersen, and A. Heine.
Acta Crystallographica Sec D: Biol. Crystallogr., May 2013; 69(5): 888-900. (MicroSys SQ 4000)
Biochemical characterization of the Nup62·58·54 nucleoporin complex and mutational analysis
of the exportin CRM1.
Hema Chug
PhD Theses, September 2013; Georg August University Göttingen, 119 pp.
https://ediss.uni-goettingen.de/bitstream/handle/11858/00-1735-0000-0023-99060/Hema%20Thesis%20Revised%20110914.pdf?sequence=1
Identification, characterization and preliminary X-ray diffraction analysis of
the rolling-circle replication initiator protein from plasmid pSTK1.
Stephen B. Carr, Lauren B. Mecia, Simon EV Phillips, and Christopher D. Thomas.
Acta Crystallographica, Sect F: Struct Biol Cryst Communs, 1 October 2013; 69(10): 1123-1126.
http://journals.iucr.org/f/issues/2013/10/00/rl5044/index.html
A piezoelectric micropump with an integrated sensor based on space-division multiplexing
Zhonghua Zhang, Junwu Kan, Guangming Cheng, Hongyun Wang, and Yonghua Jiang.
Sensors and Actuators A: Physical, 1 December 2013; 203: 29-36.
FGF-FGFR Signaling Mediated through Glycosaminoglycans in Microtiter Plate and CellBased Microarray Platforms.
Eric Sterner, Luciana Meli, Seok Joon Kwon, Jonathan S. Dordick, and Robert J. Linhardt.
Biochemistry, 17 December 2013; 52(50): 9009-9019. (MicroSys 5100 4SQ)
http://www-heparin.rpi.edu/main/files/papers/52c1a9fe717cc3.08041002.pdf
Expression, purification, crystallization and preliminary X-ray diffraction analysis of the
aspartate transcarbamoylase domain of human CAD.
Alba Ruiz-Ramos, Nada Lallous, A. Grande-García, and Santiago Ramon-Maiques.
Acta Crystallographica Sect F: Struct Biol Cryst Communs, December 2013; 69(12): 1425-1430.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855736/
2012
Human ZG16p recognizes pathogenic fungi through non-self polyvalent mannose in the
digestive system.
Hiroaki Tateno, Rikio Yabe, Takashi Sato, Azusa Shibazaki, Toshihide Shikanai, Tohru Gonoi,
Hisashi Narimatsu, and Jun Hirabayashi
Glycobiology, February 2012; 22 (2): 210-220.
http://glycob.oxfordjournals.org/content/22/2/210.full
Crystallographic structure of Mnk-1 and Mnk-2 proteins.
Inventors: Ralf Jauch, Stefan Jakel, Kay Schreiter, Markus Wahl
United States Patent: US 8129164 B2, Publication Date: 6 March 2012
https://usgene.sequencebase.com/patents/US8129164
Localized Dimerization and Nucleoid Binding Drive Gradient Formation by the Bacterial Cell
Division Inhibitor MipZ.
Daniela Kiekebusch, Katharine A. Michie, Lars-Oliver Essen, Jan Löwe, and Martin Thanbichler.
Molecular Cell, 11 May 2012; 46(3): 245-259
http://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/MolCell2012MipZ/mipz2012supp.pdf
Microfluidic devices and methods.
Inventors: Abraham Lee, Philip Felgner, Armando Tovar, Uland Liao
US Patent Application: US20120149600 A1, Publication Date: 14 June 2012
http://patent.ipexl.com/U2S/20120149600ZZDASHZZA1.html
Structure of the regulatory domain of the LysR family regulator NMB2055
(MetR-like protein) from Neisseria meningitidis.
Sarah Sainsbury, Jingshan Ren, Nigel J. Saunders, David I. Stuart, and Raymond J. Owens.
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 July 2012; 68(7): 730-737.
http://bura.brunel.ac.uk/bitstream/2438/6672/2/Fulltext.pdf
High-Throughput Transfection of Interfering RNA into a 3D Cell-Culture Chip.
Haiyuan Zhang, Moo-Yeal Lee, Michael G. Hogg, Jonathan S. Dordick, and Susan T. Sharfstein.
Small, 9 July 2012; 8(13): 2091-2098.
Two crucial early steps in RNA synthesis by the hepatitis C virus polymerase involve a dual
role of residue 405.
Nathalie Scrima, Célia Caillet-Saguy, Michel Ventura, Déborah Harrus, Thérèse Astier-Gin, and
Stéphane Bressanelli.
Journal of Virology, July 2012; 86(13): 7107-7117.
http://jvi.asm.org/content/86/13/7107.full.pdf+html
Functional interaction analysis of GM1-related carbohydrates and Vibrio
cholerae toxins using carbohydrate microarray.
Chang Sup Kim, Jeong Hyun Seo, and Hyung Joon Cha.
Analytical Chemistry, 7 August 2012; 84(15): 6884-6890.
Bioactive cyclometalated phthalimides: design, synthesis and kinase inhibition.
Sebastian Blanck, Yann Geisselbrecht, Katja Kräling, Stephen Middel, Thomas Mietke, Klaus
Harms, Lars-Oliver Essen, and Eric Meggers.
Dalton Transactions, 21 August 2012; 41(31): 9337-9348.
Comparison of signalenhancement techniques forscreening GM crops.
Atsushi Ito, Tomoyuki Taguchi, Takeyuki Mogi, Hitoshi Wake, Takeo Tanaami, Hiroshi Akiyama,
ReikoTeshima, Nobuhiro Sasaki, Akiyo Yamada, Yoshihiro Ozeki
Japanese J. Food Chemistry and Safety, 24 August 2012; 19(2): 141-148 (MycroSys4100)
http://ci.nii.ac.jp/els/110009489101.pdf?id=ART0009957224&type=pdf&lang=en&host=cinii&order
_no=&ppv_type=0&lang_sw=&no=1446059313&cp=
Crystallization and preliminary crystallographic studies of FoxE from
Rhodobacter ferrooxidans SW2, an Fe(II) oxidoreductase involved in
photoferrotrophy.
L. Pereira, I. H. Saraiva, R. Coelho, D. K. Newman, R. O. Louro, and C. Frazao
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 September 2012; 68(9): 1106-1108.
http://authors.library.caltech.edu/34983/1/fw5375.pdf
Structure-based characterization of the multimodularDevelopmentally Regulated GTPase in
complex with the DRG family regulatory protein.
Sandrea Maureen Francis
PhD Theses, 10 September 2012; Universidad Autónoma de Madrid, 145 pp. (MicroSys Honeybee)
http://digital.csic.es/bitstream/10261/63149/1/THESIS%20SandreaMF.pdf
Analysis of density-dependent binding of glycans by lectins using carbohydrate
microarrays.
Xizhe Tian, Jaeyoung Pai, and Injae Shin.
Chemistry, an Asian Journal, September 2012; 7(9): 2052-2060.
Modeling of Piezo-Actuated Stick-Slip Micro-drives: An Overview.
Ha Xuan Nguyen, Christoph Edeler, and Sergej Fatikow.
Advances in Science and Technology, September 2012 (on-line); 81(Next Generation Micro/Nano
Systems): 39-48.
Method for detection of mutant alleles.
Inventors: Geoffrey Facer, Marc A. Unger, Lincoln Mcbride
EU Patent Application: EP2518161 A1, Publication Date: 31 October 2012
http://www.freepatentsonline.com/EP2518161.html
Expression, purification, crystallization and preliminary X-ray diffraction analysis of the
dihydroorotase domain of human CAD.
Nada Lallous, Araceli Grande-Garcia, Rafael Molina, and Santiago Ramon-Maiques.
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 November 2012; 68(11):1341-5.
High-Throughput Profiling of Peptide–RNA Interactions Using Peptide Microarrays.
Jaeyoung Pai, Taejin Yoon, Nam Doo Kim, Im-Soon Lee, Jaehoon Yu, and Injae Shin.
Journal of the American Chemical Society, 21 November 2012; 134(46): 19287-19296.
Crystallization and preliminary X-ray analysis of the open form of human ecto5'-nucleotidase (CD73).
Karen Maree Knapp, Matthias Zebisch, and Norbert Strater.
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 December 2012; 68(12): 1545-1549
Influence of a three-dimensional, microarray environment on human cell culture in drug
screening systems.
Luciana Meli, Eric T. Jordan, Douglas S. Clark, Robert J. Linhardt, Jonathan S. Dordick
Biomaterials, December 2012; 33(35): 9087-9096.
Carbohydrate Microarrays for Enzymatic Reactions and Quantification of Binding Affinities
for Glycan–Protein Interactions.
Myung-Ryul Lee, Sungjin Park, and Injae Shin.
Methods Mol Biology, Carbohydrate Microarrays, 2012; 808: 103-116.
2011
Rapid simultaneous screening of seven clinically important enteric pathogens
using a magnetic bead based DNA microarray.
Hong Sun, Qiu-Hua Mo, Ji-Can Lin, Ze Yang, Cheng-Ning Tu, Da-Yong Gu, Lei Shi, Wei-Ping Lu.
World Journal of Microbiology and Biotechnology, January 2011; 27(1): 163-169.
Single domain intracellular antibodies from diverse libraries emphasizing dual functions of
LMO2 protein interactions using a single VH domain.
Tomoyuki Tanaka, Helen Sewell, Simon Waters, Simon EV Phillips, and Terence H. Rabbitts.
Journal of Biological Chemistry, 4 February 2011; 286(5): 3707-3716.
http://www.jbc.org/content/286/5/3707.full.pdf+html
A comprehensive structure-function comparison of hepatitis C virus strain
JFH1 and J6 polymerases reveals a key residue stimulating replication in cell
culture across genotypes.
Melanie Schmitt, Nathalie Scrima, Danijela Radujkovic, Célia Caillet-Saguy, Philip C. Simister,
Peter Friebe, Oliver Wicht Rahel Klein, Ralf Bartenschlager, Volker Lohmann and Stéphane
Bressanelli
Journal of Virology, March 2011; 85(6): 2565-2581.
http://jvi.asm.org/content/85/6/2565.full.pdf+html
Cloning, expression, purification, crystallization and preliminary X-ray
diffraction data of the Pyrococcus horikoshii RadA intein.
Andrzej Lyskowski, Jesper S. Oeemig, Anniina Jaakkonen, Katariina Rommi, Frank DiMaio,
Dongwen Zhou, Tommi Kajander, David Baker, Alexander Wlodawer, Adrian Goldman, Hideo Iwaï
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 May 2011; 67(5): 623-626.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087655/pdf/f-67-00623.pdf
Structure of HLA-A* 0301 in complex with a peptide of proteolipid protein: insights into the
role of HLA-A alleles in susceptibility to multiple sclerosis.
Róisín M McMahon, Lone Friis, Christian Siebold, Manuel A Friese, Lars Fugger, E. Yvonne Jones.
Acta Crystallographica Sect D: Biological Crystallography, 1 May 2011; 67(5): 447-454.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087623/pdf/d-67-00447.pdf
Glycome Diagnosis of Human Induced Pluripotent Stem Cells Using Lectin
Microarray
Hiroaki Tateno, Masashi Toyota, Shigeru Saito, Yasuko Onuma, Yuzuru Ito, Keiko Hiemori, Mihoko
Fukumura, Asako Matsushima, Mio Nakanishi, Kiyoshi Ohnuma, Hidenori Akutsu, Akihiro
Umezawa, Katsuhisa Horimoto, Jun Hirabayashi, and Makoto Asashima
J Biol Chemistry, 10 June 2011; 286(23): 20345–20353
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3121447/
Possible linkages between the inner and outer cellular states of human induced pluripotent
stem cells
Shigeru Saito, Yasuko Onuma, Yuzuru Ito, Hiroaki Tateno, Masashi Toyoda, Akutsu Hidenori,
Koichiro Nishino, Emi Chikazawa, Yoshihiro Fukawatase, Yoshitaka Miyagawa, Hajime Okita,
Nobutaka Kiyokawa, Yohichi Shimma, Akihiro Umezawa, Jun Hirabayashi, Katsuhisa Horimoto and
Makoto Asashima
BMC Systems Biology, 20 June 2011; 5(Suppl 1): S17, 12 pp. (MicroSys4000)
http://www.biomedcentral.com/1752-0509/5/S1/S17/
Detection of central single-nucleotide mismatches in short duplex DNAs on hyper-branched
amine surfaces.
Eung-Sam Kim, Chang Ok Kim, Joon Won Park, and Kwan Yong Choi.
BioChip Journal, June 2011; 5(2): 137-144.
The Structure of E. coli IgG-Binding Protein D Suggests a General Model for Bending and
Binding in Trimeric Autotransporter Adhesins.
Jack C. Leo, Andrzej Lyskowski, Katarina Hattula, Marcus D. Hartmann, Heinz Schwarz, Sarah J.
Butcher, Dirk Linke, Andrei N. Lupas, and Adrian Goldman.
Structure, 13 July 2011; 19(7): 1021-1030.
http://www.sciencedirect.com/science/article/pii/S0969212611001705
Method of nucleic acid delivery into three-dimensional cell culture arrays.
Inventors: Moo-Yeal Lee, Seok Joon Kwon, Jonathan S. Dordick, Douglas S. Clark, Jessica R.
McKinley
US Patent Application: US20110190162 A1; Publication Date: 4 August 2011
http://www.google.com/patents/US20110190162
Expression, purification and crystallization of the human UL16-binding protein
ULBP1.
Aleksandra A. Watson, Charita M. Christou, and Christopher A. O’Callaghan.
Protein Expression and Purification, September 2011; 79(1): 44-48.
Structure of New Delhi metallo-β-lactamase 1 (NDM-1).
Victoria L. Green, Anil Verma, Raymond J. Owens, Simon EV Phillips, and Stephen B. Carr.
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 October 2011; 67(10): 1160-1164.
Profiling the Cell Surface Glycome of Five Fungi Using Lectin Microarray.
Azusa Shibazaki, Hiroaki Tateno, Ando Akikazu, Jun Hirabayashi, and Tohru Gonoi.
Journal of Carbohydrate Chemistry, 17 October 2011; 30(3): 147-164.
Transduction of Glycan–Lectin Binding Using Near-Infrared Fluorescent Single-Walled
Carbon Nanotubes for Glycan Profiling.
Nigel F. Reuel, Jin-Ho Ahn, Jong-Ho Kim, Jingqing Zhang, Ardemis A. Boghossian, Lara K. Mahal,
and Michael S. Strano.
Journal of the American Chemical Society, 9 November 2011; 133(44): 17923-17933.
2010
Crystallization and X-ray diffraction analysis of human CLEC5A (MDL-1), a
dengue virus receptor.
Aleksandra A. Watson and Christopher A. O’Callaghan
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 January 2010; 66(1): 29-31.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2805530/pdf/f-66-00029.pdf
Cloning, expression, purification, crystallization and preliminary
crystallographic studies of UgdG, an UDP-glucose dehydrogenase from
Sphingomonas elodea ATCC 31461.
Joana Rocha, Ana Teresa Granja, Isabel Sá-Correia, Arsénio Fialho, and Carlos Frazão.
Acta Crystallographica, Sec. F: Struct Biol. Cryst Commun., 1 January 2010; 66(1): 69-72.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2805541/pdf/f-66-00069.pdf
Association of Reduced Tumor Necrosis Factor Alpha, Gamma Interferon, and Interleukin-1β
(IL-1β) but Increased IL-10 Expression with Improved Chest Radiography in Patients with
Pulmonary Tuberculosis.
Wen-Lin Su, Wann-Cherng Perng, Ching-Hui Huang, Cheng-Yu Yang, Chin-Pyng Wu and Jenn-Han
Chen.
Clinical and Vaccine Immunology, February 2010; 17(2): 223-231.
http://cvi.asm.org/content/17/2/223.full.pdf+html
Cloning, expression, purification, crystallization and preliminary crystallographic studies of
BceC, a UDP-glucose dehydrogenase from Burkholderia cepacia IST408.
Joana Rocha, Alma O. Popescu, Isabel Sá-Correia, Arsénio M. Fialho, and Carlos Frazão.
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 March 2010; 66(3): 269-271.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2833033/pdf/f-66-00269.pdf
Crystallization and preliminary X-ray diffraction analysis of the dimerization
domain of the tumour suppressor ING4.
Simone Culurgioni, Inés G. Muñoz, Alicia Palacios, Pilar Redondo, Francisco J. Blanco, and
Guillermo Montoya
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 May 2010; 66(Pt 5): 567-570.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2864694/
A functional carbohydrate chip platform for analysis of carbohydrate-protein
interaction.
Jeong Hyun Seo, Chang Sup Kim, Byeong Hee Hwang, and Hyung Joon Cha.
Nanotechnology, 28 May 2010; 21(21): 215101.
Identification of cytokines in whole blood for differential diagnosis of
tuberculosis versus pneumonia.
Wen-Lin Su, Wann-Cherng Perng, Ching-Hui Huang, Cheng-Yu Yang, Chin-Pyng Wu, Feng-Yee
Chang and Jenn-Han Chen,
Clin Vaccine Immunology, May 2010; 17(5): 771-777
http://cvi.asm.org/content/17/5/771.full.pdf+html
Pattern-mapped multiple detection of 11 pathogenic bacteria using a 16S rDNAbased oligonucleotide microarray.
Byeong Hee Hwang, Hyung Joon Cha
Biotechnology and Bioengineering, 1 June 2010; 106(2): 183-192.
“Seeing and Counting” Individual Antigens Captured on a Microarrayed Spot with ForceBased Atomic Force Microscopy.
Dhruvajyoti Roy, Sung Hong Kwon, Ju-Won Kwak, and Joon Won Park.
Analytical Chemistry, 15 June 2010; 82(12): 5189-5194.
http://www.nanogea.com/PSA%20roy%20anal%20chem%202010.pdf
One-Step, Acid-Mediated Method for Modification of Glass Surfaces with NHydroxysuccinimide Esters and Its Application to the Construction of Microarrays for Studies
of Biomolecular Interactions.
Sungjin Park, Jaeyoung Pai, Eun-Hee Han, Chul-Ho Jun, and Injae Shin.
Bioconjugate Chemistry, 21 July 2010; 21(7): 1246-1253.
Oligonucleotide microarrays with high discriminating power for the detection
of single nucleotide variations in the p53 gene.
Bee Hak Hong, Soon Jin Oh, Jimin Ju, Bong Jin Hong, Do Soo Jang, Young Sung Yun, Joon Won
Park, and Kwan Yong Choi.
Molecules and Cells, December 2010; 30(6): 575-579.
A versatile technology for cellular glycomics using lectin microarray. (Chapter 8)
Hiroaki Tateno, Atsushi Kuno, Yoko Itakura, Jun Hirabayashi
Methods in Enzymology, 2010; 478: 181-195.
Metabolic enzyme microarray coupled with miniaturized cell-culture array
technology for high-throughput toxicity screening.
Moo-Yeal Lee, Jonathan S. Dordick, and Douglas S. Clark.
Methods in Molecular Biology, Microarray Methods for Drug Discovery, 2010; 632: 221-237
Chemical Microarrays Constructed by Selective Attachment of Hydrazide-Conjugated
Substances to Epoxide Surfaces and Their Applications.
Sungjin Park, Myung-Ryul Lee, and Injae Shin.
Methods in Molecular Biology, Small Molecule Microarrays, 2010; 669: 195-208.
http://download.bioon.com.cn/view/upload/201103/03/1935146t66z8b4vuhtgu34.attach.pdf
Cristal· lització de la lipoxigenasa de" Pseudomonas aeruginosa" 42A2 i estudi filogenètic de
les subfamílies de les lipoxigenases.
Albert Garreta i Gambús
PhD Theses, 2010; Universitat de Barcelona, Spain, 244 pp. (MicroSys 4000)
http://core.ac.uk/download/pdf/16211970.pdf
2009
Microfluidic crystallization
Jacques Leng and Jean-Baptiste Salmon
Lab on a Chip, 7 January 2009; 9(1): 24 - 34
Construction of carbohydrate microarrays by using one-step, direct
immobilizations of diverse unmodified glycans on solid surfaces.
Sungjin Park, Myung-Ryul Lee, and Injae Shin.
Bioconjugate Chemistry, January 2009; 20(1): 155-162.
http://download.bioon.com.cn/upload/201103/03/193825b6z6oepnppv4nvyn.attach.pdf
Development of an Oligonucleotide Microarray for Mutational Analysis Using
Single or Multiple Sample Hybridization
Il-Jin Kim, Hio Chung Kang, and Jae-Gahb Park
In: Microarray Innovations: Technology and Experimentation, Ed. by Gary Hardiman, 3 April 2009;
CRC Press, Boca Raton, pp. 244-258.
Microfluidic device using chemiluminescence and a DNA-arrayed thin film transistor photosensor for single nucleotide polymorphism genotyping of PCR amplicons from whole blood.
Keiichi Hatakeyama, Tsuyoshi Tanaka, Masahiro Sawaguchi, Akihito Iwadate, Yasushi Mizutani,
Kazuhiro Sasaki, Naofumi Tateishi, and Tadashi Matsunaga.
Lab on a Chip, 21 April 2009; 9(8): 1052-1058.
http://dongrenhuaxue.host.idea-source.net/uploads/20120724/20120724170708421.pdf
Crystal structure of the acid-induced arginine decarboxylase from Escherichia
coli: reversible decamer assembly controls enzyme activity.
Juni Andréll, Matthew G. Hicks,Tracy Palmer, Elisabeth P. Carpenter, So Iwata, and Megan J. Maher
Biochemistry, 12 May 2009; 48(18): 3915-3927
http://www.lifesci.dundee.ac.uk/groups/tracy_palmer/pdfs/2009/Andrell.pdf
Development of a fluorescence-based, ultra high-throughput screening platform
for nanoliter-scale cytochrome P450 microarrays.
Sumitra M. Sukumaran, Benjamin Potsaid, Moo-Yeal Lee, Douglas S. Clark, and Jonathan S.
Dordick.
Journal of Biomolecular Screening, July 2009; 14(6): 668-678.
http://jbx.sagepub.com/content/14/6/668.full.pdf+html
Three-dimensional cellular array chip and platform for toxicology assays.
Inventors: Moo-Yeal Lee, Anand K. Ramasubramanian, Douglas S. Clark, Jonathan S. Dordick
US Patent Application: US 2009/0221441 A1, Publication Date: 3 September 2009 (MicroSys51004SQ)
http://www.google.com/patents/US20090221441
An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases.
Daniel Kress, Daniela Brügel, Iris Schall, Dietmar Linder, Wolfgang Buckel, and Lars-Oliver Essen.
Journal of Biological Chemistry, 9 October 2009; 284(41): 28401-28409.
http://www.jbc.org/content/284/41/28401.full.pdf+html
Some lessons from the systematic production and structural analysis of soluble
αβ T-cell receptors.
Gijs I. van Boxel, Guillaume Stewart-Jones, Samantha Holmes, Sarah Sainsbury, Dawn Shepherd, G.
M. A. Gillespie, Karl Harlos, David I. Stuart, Ray Owens, and E. Yvonne Jones.
Journal of Immunological Methods, 31 October 2009; 350(1): 14-21.
Structural and functional analysis of hepatitis C virus strain JFH1 polymerase.
Philip Simister, Melanie Schmitt, Matthis Geitmann, Oliver Wicht, U. Helena Danielson, Rahel
Klein, Stéphane Bressanelli, and Volker Lohmann.
Journal of Virology, November 2009; 83(22): 11926-11939.
http://jvi.asm.org/content/83/22/11926.full.pdf+html
Protein profiling in human sera for identification of potential lung cancer
biomarkers using antibody microarray.
Min-Kyu Han, Young-Hee Oh, Jimin Kang, Young-Pil Kim, Soowon Seo, Jhingook Kim, KeunChil
Park and Hak-Sung Kim
Proteomics, December 2009; 9(24): 5544-5552.
http://bel.kaist.ac.kr/extfiles/papers/1261446058-1.pdf
2008
Three-dimensional cellular microarray for high-throughput toxicology assays
Moo-Yeal Lee, R. Anand Kumar, Sumitra M. Sukumaran, Michael G. Hogg, Douglas S. Clark, and
Jonathan S. Dordick
Proc National Academy of Sciences U S A, 8 January 2008; 105(1): 59–63.
http://www.pnas.org/content/105/1/59.long
Structure and functional analysis of the IGF-II/IGF2R interaction
James Brown, Carlie Delaine, Oliver J Zaccheo, Christian Siebold, Robert J Gilbert, Gijs van Boxel,
Adam Denley, John C Wallace, A Bassim Hassan, Briony E Forbes, and E Yvonne Jones
EMBO Journal, 9 January 2008; 27(1): 265–276
http://emboj.embopress.org/content/27/1/265.long
Semi-automated microseeding of nanolitre crystallization experiments
T. S. Walter, E. J. Mancini, J. Kadlec, S. C. Graham, R. Assenberg, J. Ren, S. Sainsbury, R. J.
Owens, D. I. Stuart, J. M. Grimes and K. Harlos
Acta Crysallographica. Sect. F, January 2008; 64(1): 14-18
Automated technologies and novel techniques to accelerate protein crystallography for
structural genomics
Babu A. Manjasetty, Andrew P. Turnbull, Santosh Panjikar, Konrad Büssow, Mark R. Chance
Proteomics, February 2008; 8(4): 612-25.
Quantitative oligonucleotide microarray data analysis with an artificial standard probe
strategy
Byeong Hee Hwang and Hyung Joon Cha
Biosensors and Bioelectronics, 15 June 2008; 23(11): 1738-1744
Energy transfer-based multiplexed assay of proteases by using gold nanoparticle and quantum
dot conjugates on a surface.
Young-Pil Kim, Young-Hee Oh, Eunkeu Oh, Sungho Ko, Min-Kyu Han, and Hak-Sung Kim
Anal Chemistry, 15 June 2008; 80(12): 4634-4641.
http://125.235.3.98/dspace/bitstream/123456789/2349/1/4634-4641_Energy%20TransferBased%20Multiplexed%20Assay%20of.pdf
Multiplexed proteolytic enzyme assay based on energy transfer between
quantum dots and gold nanoparticles.
Young-Pil Kim, Young-Hee Oh, Eunkeu Oh, and Hak-Sung Kim.
NSTI Nanotechnology Conference, Nanotech 2008, Boston, MA, June 2008; 2: 198-201
http://bel.kaist.ac.kr/extfiles/conferences/1214370389-1.pdf
Optimization of evanescent-field fluorescence-assisted lectin microarray for high-sensitivity
detection of monovalent oligosaccharides and glycoproteins.
Noboru Uchiyama, Atsushi Kuno, Hiroaki Tateno, Yoshiko Kubo, Mamoru Mizuno, Midori
Noguchi, Jun Hirabayashi
Proteomics, 9 July 2008; 8(15): 3042 - 3050
Crystallization of Spätzle, a cystine-knot protein involved in embryonic development and
innate immunity in Drosophila melanogaster
Anita Hoffmann, Piotr Neumann, Angelika Schierhorn, and Milton T. Stubbs
Acta Crystallographica Sect. F., 1 August 2008; 64(8): 707-710
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2494967/
Optimization of evanescent-field fluorescence-assisted lectin microarray for
high-sensitivity detection of monovalent oligosaccharides and glycoproteins.
Noboru Uchiyama, Atsushi Kuno, Hiroaki Tateno, Yoshiko Kubo, Mamoru Mizuno, Midori
Noguchi, Jun Hirabayashi
Proteomics, August 2008; 8(15): 3042-3050.
Fabrication of Genetic Diagnostic Chip using DNA-arrayed TFT Photosensor.
Keiichi Hatakeyama, Tsuyoshi Tanaka, Masahiro Sawaguchi, Akihito Iwadate, Yasushi Mizutani,
Kazuhiro Sasaki, Naofumi Tateishi, and Tadashi Matsunaga.
Electrochemistry, August 2008; 76(8): 573-575.
https://www.jstage.jst.go.jp/article/electrochemistry/76/8/76_8_573/_pdf
On-chip, cell-based microarray immunofluorescence assay for high-throughput analysis of
target proteins.
Tiago G. Fernandes, Seok-Joon Kwon, Moo-Yeal Lee, Douglas S. Clark, Joaquim M. S. Cabral and
Jonathan S. Dordick
Anal Chemistry, 1 September 2008; 80(17): 6633-6639. (MicroSys5100-4SQ)
http://berg.ist.utl.pt/scbl/Anal_Chem_Fernandes_2008.pdf
Glycoconjugate microarray based on an evanescent-field fluorescence-assisted detection
principle for investigation of glycan-binding proteins
Hiroaki Tateno, Atsushi Mori, Noboru Uchiyama, Rikio Yabe, Jun Iwaki, Toshihide Shikanai,
Takashi Angata, Hisashi Narimatsu and Jun Hirabayashi
Glycobiology, October 2008; 18(10): 789-798
http://glycob.oxfordjournals.org/content/18/10/789.full.pdf+html
Molecular basis of xeroderma pigmentosum group C DNA recognition by engineered
meganucleases
Pilar Redondo, Jesús Prieto, Inés G. Muñoz, Andreu Alibés, Francois Stricher, Luis Serrano, JeanPierre Cabaniols, Fayza Daboussi, Sylvain Arnould, Christophe Perez, Philippe Duchateau, Frédéric
Pâques, Francisco J. Blanco & Guillermo Montoya
Nature, 6 November 2008; 456(7218): 107-111
http://public-files.prbb.org/publicacions/ce149710-d43a-012b-a7a8-000c293b26d5.pdf
Central base pair flipping and discrimination by PspGI
Roman H. Szczepanowski, Michael A. Carpenter, Honorata Czapinska, Mindaugas Zaremba,
Gintautas Tamulaitis, Virginijus Siksnys, Ashok S. Bhagwat, and Matthias Bochtler
Nucleic Acids Research, November 2008; 36(19): 6109–6117
http://nar.oxfordjournals.org/content/36/19/6109.full.pdf+html
Signal amplification of target protein on heparin glycan microarray
Tae-Joon Park, Moo-Yeal Lee, Jonathan S. Dordick and Robert J. Linhardt
Analytical Biochemistry, 1 December 2008; 383(1): 116-121
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2783401/
The Crystal Structure of Enamidase: A Bifunctional Enzyme of the Nicotinate Catabolism
Daniel Kreß, Ashraf Alhapel, Antonio J. Pierik, Lars-Oliver Essen
Journal of Molecular Biology, 26 December 2008; 384(4): 837-847
Spectral methods.
Sangmo Kang, and Yong Kweon Suh.
In: Encyclopedia of Microfluidics and Nanofluidics, 2008; pp. 1875-1881. Springer USA
Sputtering for Film Deposition.
Alexander Iles, and Nicole Pamme.
In: Encyclopedia of Microfluidics and Nanofluidics, 2008; pp. 1883-1889. Springer USA
Surface Tension Driven Flow.
Suman Chakraborty
In: Encyclopedia of Microfluidics and Nanofluidics, 2008; pp. 1956-1969. Springer USA
European structural proteomics - a perspective.
Susan Daenke, E. Yvonne Jones, and David I. Stuart.
In: Structural Proteomics and Its Impact on the Life Sciences. JL Sussman and I. Silman, eds. World
Scientific Publishing Co., Singapore, Malaysia, 2008; pp. 463-504.
http://www.spine2.eu/SPINE2/documents/Structural_Proteomics_Ch-18.pdf
2007
Chip-based analysis of SUMO (small ubiquitin-like modifier) conjugation to a target protein
Young-Hee Oh, Mi-Young Hong, Zongwen Jin, Taeryong Lee, Min-Kyu Han, Sunyoung Park and
Hak-Sung Kim
Biosensors and Bioelectronics, 15 February 2007; 22(7): 1260-1267
Development and Applications of a BRAF Oligonucleotide Microarray
Il-Jin Kim, Hio Chung Kang, Sang Geun Jang, Sun-A Ahn, Hyun-Ju Yoon, and Jae-Gahb Park
J Mol Diagnostics, February 2007; 9(1): 55–63.
The clinical significance of food specific IgE/IgG4 in food specific atopic dermatitis.
Geunwoong Noh, Hyun-Sook Ahn, Nam-Yun Cho, Sangsun Lee, Jae-Won Oh
Pediatric Allergy & Immunology, February 2007; 18(1): 63-70.
Structure and characterization of a novel chicken biotin-binding protein A (BBP-A)
Vesa P Hytönen, Juha AE Määttä, Einari A Niskanen, Juhani Huuskonen, Kaisa J Helttunen, Katrin
K Halling, Henri R Nordlund, Kari Rissanen, Mark S Johnson, Tiina A Salminen, Markku S
Kulomaa, Olli H Laitinen, and Tomi T Airenne
BMC Struct Biology, 7 March 2007; 7: 8, 20 pp.
http://www.biomedcentral.com/content/pdf/1472-6807-7-8.pdf
SUMO(Small Ubiquitin-like Modifier) Chip for Analysis of SUMO-conjugation to a Target
Protein
Young-Hee Oh, Young-Pil Kim & Hak-Sung Kim
Biochip Journal, March 2007; 1(1): 28-34
Humidity control as a strategy for lattice optimization applied to crystals of HLA-A*1101
complexed with variant peptides from dengue virus
P. Chotiyarnwong, G. B. Stewart-Jones, M. Tarry, W. Dejnirattisai, C. Siebold, M. Koch, D. I. Stuart,
K. Harlos, P. Malasit, G. Screaton, J. Mongkolsapaya and E. Y. Jones
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 May 2007; 63(5): 386-392
Inhibition of Caspase-2 by a Designed Ankyrin Repeat Protein: Specificity, Structure, and
Inhibition Mechanism
Andreas Schweizer, Heidi Roschitzki-Voser, Patrick Amstutz, Christophe Briand, Maya GulottiGeorgieva, Eva Prenosil, H. Kaspar Binz, Guido Capitani, Antonio Baici, Andreas Plückthun,
Markus G. Grütter
Structure, 16 May 2007; 15(5): 625-636
Structure of the fungal β-glucan-binding immune receptor dectin-1: Implications for function.
James Brown, Chris A. O'Callaghan, Andrew S.J. Marshall, Robert J.C. Gilbert, Christian Siebold,
Siamon Gordon, Gordon D. Brown, and E. Yvonne Jones
Protein Science, June 2007; 16(6): 1042–1052. (MicroSys4000)
http://onlinelibrary.wiley.com/doi/10.1110/ps.072791207/full
Structural and Functional Insights into a Peptide Bond-Forming Bidomain from a
Nonribosomal Peptide Synthetase
Stefan A. Samel, Georg Schoenafinger, Thomas A. Knappe, Mohamed A. Marahiel, Lars-Oliver
Essen
Structure, 18 July 2007; 15(7): 781-792
Automated Liquid Handling Systems for Submicroliter Crystallization
Therese Bergfors
In: Protein crystallization strategies for structural genomics (IUl Biotechnology), ed. Naomi E.
Chayen , International University Line, July 2007; p. 57-86 (MS-8)
A novel strategy for mammalian cell surface glycome profiling using lectin microarray.
Hiroaki Tateno, Noboru Uchiyama, Atsushi Kuno, Akira Togayachi, Takashi Sato, Hisashi
Narimatsu, and Jun Hirabayashi
Glycobiology, 10 August 2007; 17(10): 1138–1146
Structure of the Murray Valley encephalitis virus RNA helicase at 1.9 Å resolution.
Erika J. Mancini, Rene Assenberg, Anil Verma, Thomas S. Walter, Roman Tuma, Jonathan M.
Grimes, Raymond J. Owens, and David I. Stuart
Protein Science, October 2007; 16(10): 2294–2300
Fabrication of carbohydrate chips and their use to probe protein–carbohydrate interactions
Park Sungjin, Myung-Ryul Lee & Injae Shin
Nature Protocols, November 2007; 2(11): 2747 - 2758
Crystallization and preliminary X-ray diffraction analysis on the homing endonuclease I-Dmo-I
in complex with its target DNA.
P. Redondo, J. Prieto, E. Ramos, F. J. Blanco and G. Montoya
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 December 2007; 63(12): 1017–1020
Structures of an MHC Class I Molecule from B21 Chickens Illustrate Promiscuous Peptide
Binding
Michael Koch, Simon Camp, Trevor Collen, David Avila, Jan Salomonsen, Hans-Joachim Wallny,
Andrew van Hateren, Lawrence Hunt, Jansen P. Jacob, Fiona Johnston, Denise A. Marston, Iain
Shaw, P. Rod Dunbar, Vincenzo Cerundolo, E. Yvonne Jones, Jim Kaufman
Immunity, 21 December 2007; 27(6): 885-899
K-Ras Oligonucleotide Microarray and Method for Detecting K-Ras.
Inventors: Jae-Gahb Park, Il-Jin Kim, Hio-Chung Kang, Jae-Hyun Park
US Patent Application: US 2007/0298419 A1; Publication Date: 27 December 2007
http://www.lens.org/lens/patent/US_2007_0298419_A1
Structural biology in plant natural product biosynthesis--architecture of enzymes from
monoterpenoid indole and tropane alkaloid biosynthesis
Joachim Stöckigt and Santosh Panjikar
Natural Product Reports, December 2007; 24(6): 1382-400
2006
Formation of amine groups by plasma enhanced chemical vapor deposition and its application
to DNA array technology.
Donggeun Jung, Sanghak Yeo, Jinmo Kim, Bongjun Kim, Bohwan Jin, Doug-Young Ryu
Surface and Coatings Technology, 8 February 2006; 200(9): 2886-2891
Structure and binding kinetics of three different human CD1d–α-galactosylceramide–specific T
cell receptors.
Stephan D. Gadola, Michael Koch, Jon Marles-Wright, Nikolai M. Lissin, Dawn Shepherd,
Gediminas Matulis, Karl Harlos, Peter M. Villiger, David I. Stuart, Bent K. Jakobsen, Vincenzo
Cerundolo, and E. Yvonne Jones
J Exp Medicine, 20 March 2006; 203(3): 699–710. (MycroSys4000)
http://www.research.ed.ac.uk/portal/files/5880856/jem2030699.pdf
Assembly of human papillomavirus type-16 virus-like particles: multifactorial study of
assembly and competing aggregation.
Simon J. Hanslip, Nathan R. Zaccai, Anton P. J. Middelberg, Robert J. Falconer
Biotechnology Progress, March-April 2006; 22(2): 554-560
SPINE high-throughput crystallization, crystal imaging and recognition techniques: current
state, performance analysis, new technologies and future aspects
I. M. Berry, O. Dym, R. M. Esnouf, K. Harlos, R. Meged, A. Perrakis, J. L. Sussman, T. S. Walter, J.
Wilson and A. Messerschmidt
Acta Crystallographica, Sect D, October 2006; 62(10): 1137-1149
Application of high-throughput technologies to a structural proteomics-type analysis of Bacillus
anthracis
K. Au, N. S. Berrow, E. Blagova, I. W. Boucher, M. P. Boyle, J. A. Brannigan, L. G. Carter, T.
Dierks, G. Folkers, R. Grenha, K. Harlos, R. Kaptein, A. K. Kalliomaa, V. M. Levdikov, C. Meier, N.
Milioti, O. Moroz, A. Müller, R. J. Owens, N. Rzechorzek, S. Sainsbury, D. I. Stuart, T. S. Walter, D.
G. Waterman, A. J. Wilkinson, K. S. Wilson, N. Zaccai, R. M. Esnouf and M. J. Fogg
Acta Crystallographica, Sect D, October 2006; 62(10): 1267-1275
Expression profiling of proteins in L-threonine biosynthetic pathway of Escherichia coli by
using antibody microarray
Min-Kyu Han, Mi-Young Hong, Dohoon Lee, Dong-Eun Lee, Geon Youp Noh, Jin-Ho Lee, SungHo Kim, Hak-Sung Kim
Proteomics, November 2006; 6(22): 5929-5940
Human P450 Microarrays for In Vitro Toxicity Analysis: Toward Complete Automation of
Human Toxicology Screening
Moo-Yeal Lee, Douglas S. Clark, Jonathan S. Dordick
Journal of the Association for Laboratory Automation, December 2006; 11(6): 374-380
2005
From the Cover: Metabolizing enzyme toxicology assay chip (MetaChip) for high-throughput
microscale toxicity analyses.
Moo-Yeal Lee, Chan Beum Park, Jonathan S. Dordick, and Douglas S. Clark
Proc Natl Acad Sciences U S A, 25 January 2005; 102(4): 983–987
Microarray Manufacture
Emile F. Nuwaysir
In: Toxicogenomics, Eds: Hisham K. Hamadeh, Cynthia A. Afshari; John Wiley & Sons, Inc., Online:
28 January 2005; pp.55-80
Expression, purification, crystallization and preliminary X-ray analysis of strictosidine
glucosidase, an enzyme initiating biosynthetic pathways to a unique diversity of indole alkaloid
skeletons
Leif Barleben, Xueyan Ma, Juergen Koepke, Guohong Peng, Hartmut Michel, Joachim Stöckigt
Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, 14 February 2005; 1747(1): 89-92
Benefits of Automated Crystallization Plate Tracking, Imaging, and Analysis
Christopher J. Mayo, Jonathan M. Diprose, Thomas S. Walter, Ian M. Berry, Julie Wilson, Ray J.
Owens, E. Yvonne Jones, Karl Harlos, David I. Stuart and Robert M. Esnouf
Structure, February 2005; 13(2): 175-182
A CMOS-compatible DNA microarray using optical detection together with a highly sensitive
nanometallic particle protocol
Chen Xu, Jiong Li,Yijin Wang, Lu Cheng, Zuhong Lu, M. Chan
Electron Device Letters, IEEE, April 2005; 26(4): 240- 242
Structural and kinetic basis for heightened immunogenicity of T cell vaccines.
Ji-Li Chen, Guillaume Stewart-Jones, Giovanna Bossi, Nikolai M. Lissin, Linda Wooldridge, Ed
Man Lik Choi, Gerhard Held, P. Rod Dunbar, Robert M. Esnouf, Malkit Sami, Jonathan M. Boulter,
Pierre Rizkallah, Christoph Renner, Andrew Sewell, P. Anton van der Merwe, Bent K. Jakobsen,
Gillian Griffiths, E. Yvonne Jones, and Vincenzo Cerundolo
J Exp Medicine, 18 April 2005; 201(8): 1243–1255.
http://jem.rupress.org/content/201/8/1243.long
Protein array method for assessing in vitro biomaterial-induced cytokine expression
Yiwen Li, Robert J. Schutte, Amal Abu-Shakra and W. Monty Reichert
Biomaterials, April 2005; 126(10): 1081-1085
DNA microarrays on a dendron-modified surface improve significantly the detection of single
nucleotide variations in the p53 gene.
Soon Jin Oh, Jimin Ju, Byung Chul Kim, Eunsil Ko, Bong Jin Hong, Jae-Gahb Park, Joon Won Park,
and Kwan Yong Choi
Nucleic Acids Research, 6 June 2005; 33(10): e90, 8 pp.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1143581/pdf/gni087.pdf
A procedure for setting up high-throughput nanolitre crystallization experiments.
Crystallization workflow for initial screening, automated storage, imaging and optimization
T. S. Walter, J. M. Diprose, C. J. Mayo, C. Siebold, M. G. Pickford, L. Carter, G. C. Sutton, N. S.
Berrow, J. Brown, I. M. Berry, G. B. E. Stewart-Jones, J. M. Grimes, D. K. Stammers, R. M. Esnouf,
E. Y. Jones, R. J. Owens, D. I. Stuart and K. Harlos
Acta Crysallographica, Sect D Biological Crystallography, June 2005; 61(6): 651-657
High-throughput crystal-optimization strategies in the South Paris Yeast Structural Genomics
Project: one size fits all?
N. Leulliot, L. Trésaugues, M. Bremang, I. Sorel, N. Ulryck, M. Graille, I. Aboulfath, A. Poupon, D.
Liger, S. Quevillon-Cheruel, J. Janin and H. van Tilbeurgh
Acta Crysallographica, Sect D Biological Crystallography, June 2005; 61(6): 664-670
Allosteric Inhibition of Aminoglycoside Phosphotransferase by a Designed Ankyrin Repeat
Protein
Andreas Kohl, Patrick Amstutz, Petra Parizek, H. Kaspar Binz, Christophe Briand, Guido Capitani,
Patrik Forrer, Andreas Plückthun, Markus G. Grütter
Structure, August 2005; 13(8): 1131-1141
Engineering the Maltose Binding Protein for Metal Ions Sensing
Shafinaz Shahir, and Tony Cass
In: Bionanotechnology 3 Seminar (BioNano3), September 2005; Brighton, United Kingdom.
Crystallization and preliminary X-ray analysis of cryptochrome 3 from Arabidopsis thaliana
Richard Pokorny, Tobias Klar, Lars-Oliver Essen, and Alfred Batschauer
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 October 2005; 61(10): 935–938.
Experience of using convalescent plasma for severe acute respiratory syndrome among
healthcare workers in a Taiwan hospital
Kuo-Ming Yeh, Tzong-Shi Chiueh, L. K. Siu, Jung-Chung Lin, Paul K. S. Chan, Ming-Yieh Peng,
Hsiang-Lin Wan, Jenn-Han Chen, Bor-Shen Hu, Cherng-Lih Perng, Jang-Jih Lu, Feng-Yee Chang
Journal of Antimicrobial Chemotherapy, November 2005; 56(5): 919-922
Crystallization and X-ray diffraction analysis of human CLEC-2
Aleksandra A. Watson and Christopher A. O’Callaghan
Acta Crystallographica, Sect F Struct Biol Cryst Commun., 1 December 2005; 61(12): 1094–1096.
2004
Structure of the snake-venom toxin convulxin
Thil Batuwangala, Mireille Leduc, Jonathan M. Gibbins, Cassian Bon and E. Yvonne Jones
Acta Crysallographica, Sect D Biological Crystallography, January 2004; 60(1): 46-53
The Crystal Structure of Human CD1b with a Bound Bacterial Glycolipid
Thil Batuwangala, Dawn Shepherd, Stephan D. Gadola, Kevin J. C. Gibson, Nathan R. Zaccai, Alan
R. Fersht, Gurdyal S. Besra, Vincenzo Cerundolo, and E. Yvonne Jones
The Journal of Immunology, 15 February 2004; 172(4): 2382–2388
Carbohydrate chips for studying high-throughput carbohydrate-protein interactions.
Sungjin Park, Myung-ryul Lee, Soon-Jin Pyo, and Injae Shin.
Journal of the American Chemical Society, 21 April 2004; 126(15): 4812-4819. (MicroSys5100)
Optimization of fluorescent cell-based assays for high-throughput analysis using microchamber
array chip formats
Yoshinori Akagi, Sathuluri Ramachandra Rao, Yasutaka Morita and Eiichi Tamiya
Science and Technology of Advanced Materials, May 2004; 5(3): 343-349
Oligonucleotide Microarray-Based Mutation Detection of the K-ras Gene in Colorectal Cancers
with Use of Competitive DNA Hybridization.
Jae-Hyun Park, Il-Jin Kim, Hio Chung Kang, Yong Shin, Hye-Won Park, Sang-Geun Jang, Ja-Lok
Ku, Seok-Byung Lim, Seung-Yong Jeong, Jae-Gahb Park
Clinical Chemistry, September 2004; 50(9): 1688-1691.
The Paris-Sud yeast structural genomics pilot-project: from structure to function.
Sophie Quevillon-Cheruel, Dominique Liger, Nicolas Leulliot, Marc Graille, Anne Poupon, Inès Li
De la Sierra-Gallay, Cong-Zhao Zhou, Bruno Collinet, Joël Janin and Herman Van Tilbeurgh
Biochimie, September-October 2004; 86(9-10): 617-23.
The Effect of Image Compression on Classification and Storage Requirements in a HighThroughput Crystallization System
Ian Berry, Julie Wilson, Chris Mayo, Jon Diprose, and Robert Esnouf
In: Intelligent Data Engineering and Automated Learning – IDEAL 2004; Springer, Berlin /
Heidelberg, 29 October 2004; pp. 117-124
2003
Preparation and Utilization of Microarrays.
Sophie Wildsmith and Fiona Spence
In: An Introduction to Toxicogenomics. Michael E. Burczynski Ed. Taylor & Francis, Inc, 26 March
2003; p.1-16
A procedure for setting up high-throughput nanolitre crystallization experiments. I. Protocol
design and validation.
T. S. Walter, J. Diprose, J. Brown, M. Pickford, R. J. Owens, D. I. Stuart, and K. Harlos
Journal of Applied Crystallography, April 2003; 36(2): 308-314
A procedure for setting up high-throughput nanolitre crystallization experiments. II.
Crystallization results.
J. Brown, T. S. Walter, L. Carter, N. G. A. Abrescia, A. R. Aricescu, T. D. Batuwangala, L. E. Bird,
N. Brown, P. P. Chamberlain, S. J. Davis, E. Dubinina, J. Endicott, J. A. Fennelly, R. J. C. Gilbert,
M. Harkiolaki, W.-C. Hon, F. Kimberley, C. A. Love, E. J. Mancini, R. Manso-Sancho, C. E.
Nichols, R. A. Robinson, G. C. Sutton, N. Schueller, M. C. Sleeman, G. B. Stewart-Jones, M. Vuong,
J. Welburn, Z. Zhang, D. K. Stammers, R. J. Owens, E. Y. Jones, K. Harlos and D. I. Stuart
Journal of Applied Crystallography, April 2003; 36(2): 315-318
Resource and hardware options for microarray-based experimentation.
Nabeel A. Affara
Briefings in Functional Genomics & Proteomics, April 2003; 2(1): 7-20. (MicroSys4100, 5100)
http://bfg.oxfordjournals.org/content/2/1/7.full.pdf+html
Development and Applications of a ß-Catenin Oligonucleotide Microarray: ß-Catenin
Mutations Are Dominantly Found in the Proximal Colon Cancers with Microsatellite
Instability
Il-Jin Kim, Hio Chung Kang, Jae-Hyun Park, Yong Shin, Ja-Lok Ku, Seok-Byung Lim, So Yeon
Park, Seung-Yong Jung, Hark Kyun Kim and Jae-Gahb Park
Clinical Cancer Research, August 2003; 9(8): 2920-2925
2002
GENE EXPRESSION PROFILING BY DNA MICROARRAY TECHNOLOGY
Keisuke Iida and Ichiro Nishimura
Crit. Rev. Oral Biol. Medicine, 2002; 13(1): 35-50
RET Oligonucleotide Microarray for the Detection of RET Mutations in Multiple Endocrine
Neoplasia Type 2 Syndromes.
Il-Jin Kim, Hio Chung Kang, Jae-Hyun Park, Ja-Lok Ku, Jong-Soo Lee, Hyuk-Joon Kwon, KyongAh Yoon, Seung Chul Heo, Hee-Young Yang, Bo Youn Cho, Seong Yeon Kim, Seung Keun Oh,
Yeo-Kyu Youn, Do-Jun Park, Myung-Shik Lee, Kwang-Woo Lee, Jae-Gahb Park
Clinical Cancer Research, February 2002; 8(2): 457-463
Quantitative Measurement of Serum Allergen-Specific IgE on Protein Chip
Tae-Eun Kim, Seok-Won Park, Nam-Yun Cho, Seung-Young Choi, Tai-Soon Yong, Baek-Hie
Nahm, SangSun Lee, Geunwoong Noh
Experimental and Molecular Medicine, May 2002; 34(2): 152-158
Automated measurements of antilisterial activities of lactate and diacetate in ready-to-eatmeat
Evelyne Mbandi, Leora A. Shelef
Journal of Microbiological Methods, May 2002; 49(3): 307-314
Characterization of the microbial community in an anaerobic ammonium-oxidizing biofilm
cultured on a nonwoven biomass carrier
Takao Fujii, Hiroyuki Sugino, Joseph D. Rouse, Kenji Furukawa
Journal of Bioscience and Bioengineering, 2002; 94(5): 412-418
2001
Automated simultaneous detection of low levels of listeriae and salmonellae in foods
Hui Peng, Leora A. Shelef
International Journal of Food Microbiology, 15 February 2001; 63(3): 225-233
2000
A new rapid automated method for the detection of Listeria from environmental swabs and
sponges.
R. Firstenberg-Eden, L.A. Shelef
International Journal of Food Microbiology, 1 June 2000; 56(2-3): 231-7.
Rapid detection of low levels of Listeria in foods and next-day confirmation of L.
monocytogenes.
Hui Peng and Leora A. Shelef
J Microbiol Methods, July 2000; 41(2):113-20.
1999
Automated detection of Salmonella spp. in foods.
Wei Tan and Leora A. Shelef.
J Microbiol Methods, 1 July 1999; 37(1): 87-91.
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