Jeremy R. Manning, P .D.
Princeton Neffroscience Institffte
Washington Rd.
Princeton, N.J.
U.S.A.
C
Email: manning @princeton.edff
: flflfl.princeton.edff/∼manning
Employment
—
Postdoctoral Research Associate, Princeton University, Princeton, NJ
Princeton Neffroscience Institffte Department of Compffter Science
Adfiisors: Kenneth Norman, P .D. Dafiid Blei, P .D.
Edffcation
P .D. in Neffroscience, University of Pennsylvania, Philadelphia, PA
Adfiisor: Michael Kahana, P .D.
Dissertation: Acquisition, storage, and retrieval in digital and biological brains
B.S. in Neffroscience (High honors, Magna cum laude), Brandeis University, Waltham,
MA
Adfiisor: Robert Sekffler, P .D.
Dissertation: Modeling human spatial navigation using a degraded ideal navigator
B.S. in Compffter Science (Magna cum laude), Brandeis University, Waltham, MA
Grants, honors,
aflards
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NIMH Rffth L. Kirshstein National Research Serfiice Aflard for an Indifiidffal Predoctoral
Felloflship
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NIH Compfftational Neffroscience Training Grant
—
NIH Systems and Integratifie Biology Training Grant
Pffblications
P
In prep
presentations

Manning JR, Hfflbert JC, Williams J, Piloto L, Sahakyan L, Norman KA (
) A neffral
signatffre of intentional forgeing fiia conteffitffal ffshing. Under revision at e Journal
of Neuroscience.
Manning JR, Stachenfeld K, Ranganath R, Tffrk-Broflne NB, Norman KA, Blei DM (
)
A probabilistic approach to fffll-brain fffnctional connectifiity analyses. In preparation.
Ramayya AG, Manning JR, Jacobs J, Fried I, Kahana MJ (
) A nonlinear relation betfleen hffman neffronal spiking and spectral changes in the local eld potential. Under
revision at Neuron.
Manning JR∗ , Li N∗ , Kahana MJ (
) Long-range interactions betfleen neffrons encode
nafiigationally relefiant information in the hffman brain. In preparation. ∗ Denotes equal
contribution.
Benson NC, Manning JR, Brainard DH (
) Unsffperfiised learning of cone spectral
classes from natffral images. PLoS Computational Biology, ( ): e
.
Manning JR, Ranganath R, Norman KA, Blei DA (
) Topographic Factor Analysis: a
Bayesian model for inferring brain netflorks from neffral data. PLoS One, ( ): e
.
Manning JR, Lefl TF, Li N, Kahana MJ, Sekffler RW (
) MAGELLAN: a cognitifie mapbased model of hffman flay nding. Journal of Experimental Psychology: General,
( ):
.
Manning JR, Kahana MJ (
ory, ( ):
.
) Interpreting semantic clffstering e ects in free recall. Mem-
Manning JR, Sperling MR, Sharan A, Rosenberg EA, Kahana MJ (
) Spontaneoffsly reactifiated paerns in frontal and temporal lobe predict semantic clffstering dffring memory
search. e Journal of Neuroscience, ( ):
.
Manning JR, Polyn SM, Baltffch G, Li B, Kahana MJ (
) Oscillatory paerns in temporal lobe refieal conteffit reinstatement dffring memory search. Proceedings of the National
Academy of Sciences of the United States of America,
( ):
.
Jacobs J, Manning JR, Kahana MJ (
) Response to Miller: “broadband” fis. “high gamma”
electrocorticographic signals. e Journal of Neuroscience, ( ): Online.
Manning JR, Jacobs J, Fried I, Kahana MJ (
) Broadband shis in local eld potential
pofler spectra are correlated flith single-neffron spiking in hffmans. e Journal of Neuroscience, ( ):
.
Manning JR, Brainard DH (
) Optimal design of photoreceptor mosaics: flhy fle do
not see color at night. Visual Neuroscience, : - .
P

Manning JR, Ranganath R, Keffng W, Tffrk-Broflne NB, Cohen JD, Norman KA, Blei DM
(
) Hierarchical Topographic Factor Analysis. IEEE Xplore, th International Workshop
on Paern Recognition in Neuroimaging:
.
Manning JR, Gershman SJ, Norman KA, Blei DM (
) Factor topographic latent soffrce
analysis: factor analysis for brain images. Neural Information Processing Systems (NIPS)
Workshop on Machine Learning and Interpretation in Neuroimaging, : Online.
B
Manning JR, Kahana MJ, Norman KA (
) e role of conteffit in memory. To appear in
Gazzaniga M, Ed. e Cognitive Neurosciences, Fih Edition. Cambridge, MA: MIT Press.
T
Manning JR, Williams J, Piloto L, Hfflbert JC, Abffshanab B, Sahakyan L, Norman KA
(
) Neffral efiidence for a conteffitffal change accoffnt of list-method directed forgeing.
Manhaan Area Memory Meeting (MAMM). Nefl York, NY.
Manning JR (
) Hierarchical Topographic Factor Analysis. Paern Recognition in Neuroimaging. Tübingen, Germany.
Manning JR, Williams J, Piloto L, Hfflbert JC, Abffshanab B, Sahakyan L, Norman KA
(
) Neffral efiidence for a conteffitffal change accoffnt of list-method directed forgeing.
Context and Episodic Memory Symposium. Philadelphia, PA.
Manning JR (
) e dark maer of memory search. Dartmouth-Hitchcock Medical Center. Lebanon, NH.
Manning JR (
) Topographic Factor Analysis: inferring brain netflorks from fMRI data.
Neuroimaging and Analysis Methods Seminar, Princeton University. Princeton, NJ.
Manning JR (
) Commentary on incorporating neffral signals into compfftational models of memory search. Context and Episodic Memory Symposium. Philadelphia, PA.
Manning JR (
Amherst, MA.
) A neffral signatffre of mental time trafiel. University of Massachuses.
Manning JR (
NH.
) A neffral signatffre of mental time trafiel. Dartmouth College. Hanofier,
Manning JR (
) Decoding topic fiectors from brain images. Neuroimaging and Analysis
Methods Seminar, Princeton University. Princeton, NJ.
Manning JR (
) Acqffisition, storage, and retriefial in digital and biological brains. Natick Soldier Systems Center. Natick, MA.
Manning JR (
) Acqffisition, storage, and retriefial in digital and biological brains.
Charles River Analytics. Cambridge, MA.
Manning JR (
) Intracranial recordings yield nofiel insights into hofl episodic memories are represented, stored, and retriefied. Society for Mathematical Psychology. Boston,
MA.
Manning JR (
) Identifying neffral signatffres of conceptffal representations and conteffit reinstatement. Neuroimaging and Analysis Methods Seminar, Princeton University.
Princeton, NJ.
P
Manning JR, Stachenfeld K, Ranganath R, Tffrk-Broflne N, Norman KA, Blei DM (
)
e Hierarchical Topographic Factor Analysis MATLAB Toolboffi. Collaborative Research
in Computational Neuroscience (CRCNS) Principal Investigators Meeting. Tempe, AZ.
Manning JR, Ranganath R, Norman KA, Blei DM (
) E cient discofiery of fffnctional
brain netflorks in large mffltisffbject fMRI datasets. Society for Neuroscience. Washington,
DC.
Manning JR, Hfflbert JC, Williams J, Piloto L, Sahakyan L, Norman KA (
) Neffral efiidence for a conteffit-change accoffnt of list-method directed forgeing. Society for Neuroscience. Washington, DC.
Manning JR, Ranganath R, Norman KA, Blei DM (
) Hierarchical Topographic Factor Analysis: a MATLAB toolboffi for e ciently discofiering brain netflorks in fMRI data.
Context and Episodic Memory Symposium. Philadelphia, PA.
Manning JR, Blei DM, Norman KA (
) Integrating neffral and behafiioral data into
episodic memory models. Society for Neuroscience. San Diego, CA.
Manning JR, Blei DM, Norman KA (
) A probabilistic temporal conteffit model for tracking mental conteffit ffsing neffral and behafiioral data. Collaborative Research in Computational Neuroscience (CRCNS) Principal Investigators Meeting. Cambridge, MA.
Manning JR, Blei DM, Norman KA (
) A probabilistic temporal conteffit model for tracking mental conteffit ffsing neffral and behafiioral data. Context and Episodic Memory Symposium. Philadelphia, PA.
Manning JR, Blei DM, Norman KA (
) Decoding topic fiectors dffring memory encoding and retriefial. Society for Neuroscience. Nefl Orleans, LA.
Manning JR, Blei DM, Norman KA (
) Teffit, neffroimaging, and memory: ffni ed models of corpora and cognition. Collaborative Research in Computational Neuroscience (CRCNS) Principal Investigators Meeting. St. Loffis, MO.
Manning JR, Blei DM, Norman KA (
) Tracking item representations dffring free recall.
Context and Episodic Memory Symposium. Bloomington, IN.
Manning JR, Kahana MJ (
) Hofl does the brain represent and retriefie flord meanings? Collaborative Research in Computational Neuroscience (CRCNS) Principal Investigators Meeting. Princeton, NJ.
Gershman SJ, Manning JR, Blei DM, Norman KA (
) Nefl tools for decoding mental
representations from neffroimaging data. Collaborative Research in Computational Neuroscience (CRCNS) Principal Investigators Meeting. Princeton, NJ.
Manning JR, Kahana MJ (
) Hofl does the brain represent and retriefie flord mean-
ings? Society for Neuroscience. Washington, DC.
Manning JR, Kahana MJ (
) Temporal and frontal netflorks refieal hofl conceptffal
memories are organized. Context and Episodic Memory Symposium. Philadelphia, PA.
Manning JR, Hffrst B, Brainard DH (
) Learning receptor types from receptor responses.
Computational and Systems Neuroscience (COSYNE). Salt Lake City, UT.
Manning JR, Polyn SM, Kahana MJ (
ety for Neuroscience. San Diego, CA.
) A neffral signatffre of mental time trafiel. Soci-
Ramayya AG, Manning JR, Jacobs J, Kahana MJ (
) e ring rate–LFP relation changes
as a fffnction of ring rate in hffmans. Society for Neuroscience. San Diego, CA.
Manning JR, Polyn SM, Kahana MJ (
) Obserfiing mental time trafiel in action: neffrophysiological sffpport for conteffit-based models of episodic memory. Context and Episodic
Memory Symposium. Philadelphia, PA.
Manning JR, Polyn SM, Kahana MJ (
) Neffral correlates of conteffit-based models of
free recall. Society for Neuroscience. Chicago, IL.
Manning JR, Polyn SM, Kahana MJ (
) e neffral representation of conteffit and its role
in free recall. Society for Mathematical Psychology. Amsterdam, e Netherlands.
Manning JR, Jacobs J, Fried I, Kahana MJ (
) Broadband shis in EEG pofler spectra are
correlated flith single-neffron actifiity in hffmans. Society for Neuroscience. Washington,
DC.
Manning JR, Jacobs J, Fried I, Kahana MJ (
) Broadband shis in EEG pofler spectra
are correlated flith single-neffron actifiity in hffmans. Society for Mathematical Psychology. Washington, DC.
Manning JR, Kahana MJ, Sekffler R (
) An ideal nafiigator model of hffman flay nding: learning one’s flay aroffnd a nefl tofln. Cognitive Neuroscience Society. Nefl York, NY.
Manning JR, Brainard DH (
) Why don’t fle see color at night? Computational and
Systems Neuroscience (COSYNE). Salt Lake City, UT.
Soflare
Manning JR (
) Hierarchical Topographic Factor Analysis. E ciently discofier fffnctional brain netflorks in fMRI data.
Manning JR (
) MATLAB Ipsffm. Generate ller teffit ffsing MATLAB. MATLAB Central File Effichange:
.
Manning JR (
) Easy resample. Simple interface for interpolating or resampling a
signal. MATLAB Central File Effichange:
.
Manning JR (
) Chffck Close-ify. Afftomatically create artflork in Chffck Close’s iconic
style based on effiisting photographs. MATLAB Central File Effichange:
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Manning JR (
) Plot fMRI images. ick and easy method for generating
.
brain plots. MATLAB Central File Effichange:
and
Manning JR (
) Generate synthetic fMRI data. Generate synthetic data for testing fMRI
.
analyses and models. MATLAB Central File Effichange:
Manning JR (
) Sane pColor. Create
images that don’t look blffrry in OS X’s Prefiiefl PDF fiiefler. MATLAB Central File Effichange:
.
Manning JR (
) Aach. MATLAB implementation of the aach fffnction in R. MAT.
LAB Central File Effichange:
Manning JR (
) Get tight sffbplot handles. Allofls ffser to effiert ner control ofier sffbplot spacing in MATLAB. MATLAB Central File Effichange:
.
Manning JR (
) Slices. E ciently slice a tensor along the nth dimension. MATLAB
Central File Effichange:
.
Teaching
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Co-supervisor, masters stffdents and ffndergradffate research assistants
Instructor, Compfftational Neffroscience (sffmmer coffrse)
Instructor, Compfftational Neffroscience (sffmmer coffrse)
Guest lecturer, Hffman Memory (topic: Hop eld netflorks)
Co-instructor, Teaching assistant, Compfftational Neffroscience (sffmmer coffrse)
Teaching assistant, Introdffction to Brain and Behafiior
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Co-supervisor, research assistants and doctoral rotation stffdent
Organizer, Machine Learning Reading Groffp
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Computer Science Undergraduate Department Representative
General teaching assistant, Programming in Jafia and C; Strffctffre and Interpretation of
Compffter Programs; Internet and Society
Last ffpdated: September
,