Coherent X-ray Imaging Instrument Sébastien Boutet CXI Instrument Scientist June 3, 2009

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Coherent X-ray Imaging Instrument
Sébastien Boutet
CXI Instrument Scientist
June 3, 2009
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Outline
CXI Science
CXI Goals and Physics Requirements
CXI Instrument Overview
X-ray Optics and Diagnostics
KB Mirror Systems
Sample Environments
Detector
Operating Modes
Work Breakdown Structure
Early Science Instrument Scope
Preliminary Instrument Design Review
Summary
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Science Team
Specifications and instrument concept developed with the
science team.
The CXI team leaders
Janos Hajdu, Uppsala University (leader)
Henry Chapman, DESY, University of Hamburg
John Miao, UCLA
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Coherent Diffractive Imaging of Biomolecules
One pulse, one measurement
Particle
injection
LCLS
pulse
Noisy diffraction
pattern
Wavefront
sensor or
second
detector
Combine many measurements into 3D dataset
Data Frames
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Combined Data Set
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Reconstruction
Sébastien Boutet
sboutet@slac.stanford.edu
Coherent X-ray Imaging Science
3D bio imaging beyond the damage limit
Single injected reproducible biomolecules
that can’t be crystallized
Protein
molecule
injection
Proteins
Membrane Proteins
Viruses
Molecular complexes
Molecular machines
Biomolecular structure determination from
nanocrystals
No need for large high quality crystals
LCLS
detector
2D bio imaging beyond the damage limit
detector
Live hydrated cells with particle injector
Nanoparticles
Quantum dots
Amorphous nanoparticles
To mass
spectrometer
High fluence X-ray-matter interactions
Damage studies during the pulse
Effect of tamper layers on damage
X-ray diffraction pattern
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Instrument Goals/Requirements
Goals
Perform imaging of single particles at highest spatial resolution achievable
using single LCLS pulses
Image biological nanoparticles beyond the classical damage limit using
single LCLS pulses
Global Requirements (SP-391-000-19)
Tailor and characterize X-ray beam parameters
Spatial Profile
Intensity
Repetition rate
Deliver the sample to the beam and control its environment
Key Performance Parameters
4-20 keV energy range
Using the fundamental and third harmonic
Set by LCLS beam
Particle Injector
50-500 nm size range
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Instrument Location
Near Experimental Hall
AMO
SXR
X-ray Transport Tunnel
XPP
XCS
CXI
Endstation
Source to Sample distance : ~ 440 m
Far Experimental Hall
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Far Experimental Hall
CXI Control
Room
XCS Control Room
Lab Area
Hutch #6
X-ray Correlation Spectroscopy
Instrument
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Coherent X-ray Imaging
Instrument
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Instrument Overview
Guard Slits
Requirement
Diagnostics
Device
XRT
Photon Shutter
Remove X-ray beam halo
X-ray Guard Slits
Attenuators
Tailor X-ray intensity
Attenuators
Pulse Picker
Tailor X-ray repetition rate
Pulse Picker
Reference Laser
Characterize X-ray pulse intensity
Intensity Monitor
Guard Slits
Characterize X-ray spatial profile
Profile Monitor
Diagnostics
Characterize X-ray focus
Wavefront Monitor
Align experiment without X-ray beam
Reference Laser
Maximize X-ray flux on sample
Tailor focal spot size to the sample
1 micron Kirkpatrick-Baez Mirrors
0.1 micron Kirkpatrick-Baez Mirrors
Minimize air scatter and background
Position sample and final apertures
Sample environment
Position sample environment
Instrument Stand
Deliver particles to the X-ray beam in
Particle Injector
Measure X-ray scattering pattern
2D X-ray Detector (Utilizing the
LCLS Detector)
Position X-ray area detector
Detector Stage
Analysis of sample fragments after
Coulomb explosion
Ion Time-of-Flight
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Instrument Overview
Particle injector
Detector Stage
(upstream position)
Sample Chamber
Detector Stage
(back position)
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Precision
Instrument Stand
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Sébastien Boutet
sboutet@slac.stanford.edu
X-ray Optics and Diagnostics
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Requirement
Device
Remove X-ray beam halo
X-ray Guard Slits
Tailor X-ray intensity
Attenuators
Tailor X-ray repetition rate
Pulse Picker
Characterize X-ray pulse intensity
Intensity Monitor
Characterize X-ray spatial profile
Profile Monitor
Characterize X-ray focus
Wavefront Monitor
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Sébastien Boutet
sboutet@slac.stanford.edu
X-ray Optics and Diagnostics
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
LUSI Attenuator\Pulse Picker System
Excellent Optical Quality
> 3 steps per decade of attenuation above 6 keV
> 1012 attenuation < 17 keV
Isolate 3rd harmonic from fundamental
Tailor rep rate up to 10 Hz
Wavefront Monitor
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Reference Laser
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Purpose
Rough alignment of the experiment without the X-ray beam
Requirements
On/Off states
Beam size
Smallest possible at the end of the hutch
Stability
5% of FWHM (short term)
15% of FWHM (long term)
Useable with any part of the instrument vented to air
Window valves
Wavefront Monitor
Aligned to the unfocused FEL beam to within 100 microns
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI 1 µm KB Mirrors
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Purpose
Produce a 1 µm focus
Focal lengths
8.2 m for M1
7.8 m for M2
Requirements
350 mm clear aperture
3.4 mrad maximum incidence angle
SiC coating
<1 nm rms height error over entire mirror
2-11 keV energy range
Space for 2 coating strips
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI 1 µm Sample Environment
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Purpose
Position samples on grids
and apertures
Maintain high vacuum
Requirements
Accommodate multiple
experiments configurations
Fixed targets
Injected particles
Interface with
Detector Stage
downstream and
upstream
Ports for
Particle Injector
Ion TOF
Lasers
Vacuum better than 10-7
torr
Rapid access
Large volume for flexibility
Compatible only with 1
micron KB System
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI 0.1 µm KB Mirrors/Sample Environment
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Purpose
Produce a ~100 nm focus
Focal lengths
0.9 m for M1
0.5 m for M2
Requirements
Identical to 1 micron KB System in every way except for the mirror
curvature
Integrated system with 0.1 micron Sample Chamber due to
close proximity
Extend vacuum enclosure by ~600 mm for sample area
Separate both parts of the vacuum enclosure with valve and
window
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Particle Injector
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Purpose
Deliver support-free single particles to the LCLS beam
Requirements
< 250 microns Particle beam focus
> 50 % Transmission
10 mm XZ Translation
10 – 1000 nm Particle size range
Aerodynamic lens
Stack of concentric orifices with decreasing openings.
Particle beam diagnostics
Charge detectors
Particle beam viewer
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Ion TOF
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Purpose
Detect ions produced by exploding sample
Provide a veto trigger signal when a particle was hit by the beam
Identify unwanted particles
Requirements
1 Atomic Mass Unit resolution
Up to 100 AMU detection
1 GHz digitization
Does not interfere with imaging detector
Design based on AMO Ion Spectrometer
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Detector
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Collaboration with
the Gruner Group
at Cornell
University
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
2D Pixel Array Detector
High resistivity Silicon (500 µm) for direct x-ray conversion.
Reverse biased for full depletion.
Bump-bonding connection to CMOS ASIC.
<1 photon readout noise
110x110 µm2 pixels
1520x1520 pixels
103 dynamic range
120 Hz readout
Tiled detector, permits variable ‘hole’ size
Detector not in CXI LUSI scope
Part of LCLS Project scope
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI Detector Stage
Guard Slits
Diagnostics
XRT
Photon Shutter
Attenuators
Pulse Picker
Reference Laser
Guard Slits
Diagnostics
Guard Slits
1 µm KB Mirrors
Diagnostics
Guard Slits
FEH Hutch 5
0.1 µm KB Mirrors
0.1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Guard Slits
Diagnostics
1 µm Sample Environment
Particle Injector
Ion TOF-MS
Detector Stage
Wavefront Monitor
Beam Dump
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Purpose
Center the detector hole on the direct beam
Position the detector at the appropriate distance from the
interaction region
Requirements
Range along the beam : 50-2400 mm
Non-continuous
Vacuum better than 10-7 torr
Diagnostics behind the detector for alignment
Valve to isolate the detector vacuum
Short term stability
1 micron
10 µrad (pitch/yaw)
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Sébastien Boutet
sboutet@slac.stanford.edu
Operating Modes
Photon operating modes described in LCLS Document 1.6.009
CXI operation requires SH1, SH2 and S5 open
CXI has three modes:
“1 micron” Mode
Use 1 micron KB mirrors and 1 micron Sample Environment
“0.1 micron” Mode
Use 0.1 micron KB mirrors and 0.1 micron Sample Environment
“Unfocused” Mode
No focusing optic and 1 micron Sample Environment
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI with 1 micron and Unfocused Beam
Diagnostics/
Common Optics
Diagnostics &
Wavefront Monitor
1 micron Sample
Environment
1 micron KB
Reference Laser
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
CXI with 0.1 micron Beam
Diagnostics/
Common Optics
Wavefront Monitor
0.1 micron KB &
Sample Environment
1 micron KB
Reference Laser
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Work Breakdown Structure
WBS Scope/Cost Includes:
1.3.1
CXI System Integration & Design
1.3.2
CXI X-ray Optics - 2 KB mirror systems
1.3.3
CXI Lasers - Reference Laser
1.3.4
CXI Coherent Imaging Injector
1.3.5
CXI Sample Environment – 2 Sample Chambers, 2 Stands, Detector
Stage & Sample diagnostics
1.3.6
CXI Hutch Facilities
1.3.7
CXI Vacuum system
1.3.8
CXI Installation
Other Related WBS
1.5
Diagnostics & Common Optics
1.6
Controls and Data Acquisition
LCLS Cornell 2D Pixel Array Detector
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Scope
Early Science Scope
(available 2011)
CD 4
(available in 2012 or before)
1 micron KB System
0.1 micron KB System
1 micron Sample Chamber
0.1 micron Sample Chamber
1 micron Instrument Stand
0.1 micron Instrument Stand
Detector Stage
Particle Injector
Reference Laser
Ion TOF
X-ray Slits
X-ray Attenuator/Pulse Picker
X-ray Diagnostics
X-ray Optics and Diagnostics Support Stands
Vacuum System
Controls & Data Systems
Hutch Facilities
X-ray Detector System
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Preliminary Instrument Design Review
Design review held on December 4, 2007
PIDR Committee Members
John Arthur (LCLS)
Chris Jacobsen (Stony Brook)
Stefano Marchesini (LLNL)
Michael Soltis (SLAC, SSRL)
Quotes from Report
“The committee found the preliminary design well thought out, and
the proposed design viable. The design appears to be appropriately
flexible and applicable to a wide range of diffraction-imaging
science.”
“The committee recommends that the experimental team move
forward with the design leading to a Final Design Review, taking into
account the comments and recommendations enumerated below.”
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Preliminary Instrument Design Review (2)
PIDR Recommendation
Post Review Resolutions
1. The instrument utility depends on the performance
of the focusing system, which plans to utilize KB
mirrors. At this point it is not certain whether the
required focus efficiency and wavefront preservation
can be achieved. It is recommended that LUSI
actively collaborate with one of the leading KB mirror
development programs, so as to better understand
the state of the art and minimize risk in this area.
The CXI team has been in communication with the
Osaka group and the JTEC company for months
about the KB mirrors. The contact person for these
groups has come to SLAC for 2 days of discussions.
The CXI team has also contacted 9 potential vendors
to discuss the specifications for the mirrors and how
they relate to their capabilities and the state of the
art..
A mirror vendor with proven capabilities
has been selected.
2. In addition to KB mirrors, this instrument plans to
use Be lenses for focusing. At this time it appears
that lenses with the desired focal length are not
readily available. The CXI team needs to pursue this
issue with the lens vendor, to be certain that the
desired lenses can be procured
The Be lenses have been removed from the scope of
the instrument since the review. The removal from the
scope has no impact on any of the other components
in the CXI system.
Contingency became available and Be
lenses were put back into the CXI scope.
Lenses with the required focal length do
exist and this was confirmed during
discussions with the vendor.
3. The range of applicability of the Cornell detector is
still being decided. This has the consequence that
some detector specifications, such as the diameter
of the central hole, are not yet determined. The CXI
team needs to finalize the application-driven
specifications for the detector soon. The CXI team
should investigate the possibility of a detector
scaffold that would allow for a variable central hole.
The specifications of the Cornell detector were
somewhat fixed many years ago by the LCLS
construction project when they signed the MOU with
Cornell. Therefore, there is limited freedom to modify
these specifications at this point in the project.
However, the Physics Requirements Document for
the detector (LCLS PRD # 1.6-002) was updated and
the CXI team believes the specifications are sufficient
to allow interesting science to be accomplished. The
main issue with the detector is the small number of
pixels and the CXI team was successful in convincing
Cornell and LCLS to build a mechanical framework
that easily allows for future expansion of the tiled
system to increase the number of pixels. This
framework also allows the detector hole size to be
varied from 1 to 10 mm.
The mechanical design of the variable
detector hole is almost complete and
fabrication will start soon. It is expected
that the yield on the Cornell chips will be
high enough that the full detector can be
populated, producing a detector with
1500x1500 pixels instead of 750x750.
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Updated Resolutions
Sébastien Boutet
sboutet@slac.stanford.edu
Preliminary Instrument Design Review (3)
PIDR Recommendation
Post Review Resolutions
Updated Resolutions
4. Analysis of the experimental data will be affected by the
quality of the X-ray focal spot, so a reliable technique for
determining X-ray wave shape at the focus needs to be
developed. Two concepts were presented during the
review, but it is not yet clear if either concept will work for
CXI. Since this is an issue common to other LCLS
experiments and experiments at other XFELs, it is
recommended that LUSI collaborate with other XFEL
groups in R&D in this area.
LUSI will first of all build a wavefront monitor
that will constitute a prototype diffractive
imaging wavefront sensor. Since LUSI is not
allowed to perform R&D, no formal
collaboration exists to test the wavefront
sensor concepts. However, informally, the CXI
scientist and the DCO scientists are involved in
writing proposal to use the beam in the AMO
hutch to test wavefront sensor techniques in
collaboration with other groups from LLNL,
SPRING8 and DESY who have previous
experience with such devices at longer
wavelengths. The hope is to perform
experiments at LCLS with the soft X-ray beam
in the second half of 2009, if the proposal is
approved of course
Beamtime for testing wavefront sensing
techniques is planned during the early
commissioning of AMO.
5. The current concept for an experimental chamber
stresses flexibility, with lots of access ports and valves. The
committee approves of this flexible approach, since it is not
yet clear exactly which types of imaging experiments will
prove most suited to LCLS. After some experience is
obtained, a more specialized second-generation chamber
may be desired.
Since this review, the LUSI project has made
the decision to build 2 CXI chambers, with the
first to be delivered earlier. It is hoped that
some lessons can be learned from
experiments with the first chamber to improve
the second chamber. Also, very similar
experiments are being proposed to use the soft
x-ray beam focused by the AMO KB mirrors
into a rollup chamber located in hutch 2.
Information from these experiments, in which
the CXI scientist is involved, will be used to
improve the design of the second CXI chamber
as well. Again, this is dependent on the
approval of the proposal for beamtime by the
LCLS proposal review panel.
No change.
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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Sébastien Boutet
sboutet@slac.stanford.edu
Preliminary Instrument Design Review (4)
PIDR Recommendation
6. The committee feels that in the near term, a
scientifically-productive use of the CXI station could be for
performing crystallography using sub-micrometer-sized
crystals. The CXI team should examine the needs of such
experiments, in particular detector and sample holder
needs, and make sure that a proof-of-principal experiment
could be accommodated by the near-term instrument
design
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
Post Review Resolutions
Updated Resolutions
The CXI team believes that some nanocrystals
can be mounted on grids into vacuum. Some
nanocrystals can tolerate the vacuum
environment without damage and these would
be ideal candidates for proof-of-principle
experiments. Also, the particle injector could be
used to deliver these nanocrystals although
this is not the preferred method for a
demonstration of the technique. The main
limitation to such experiments with
nanocrystals is the number of pixels on the
detector. If we assume that we want on the
order of 10 pixels between each Bragg peak,
then only 38 diffraction orders can be resolved
with the 760x760 pixel detector. The detector
allows a resolution of 0.2 nm which means the
largest unit cell that can be resolved is 7.6 nm.
This is sufficient for small proteins. The
expandability of the detector will allow us to
increase the number of pixels to 1500x1500
pixels which will increase the maximum unit
cell that one can image. As a comparison,
typical protein crystallography beamlines use
detectors with 4000x4000 pixels which means
the CXI instrument will at the beginning have
the capability to solve the structure of proteins
that are 20% of the size of what can be done
with large crystals. With the detector upgrade,
this will be pushed to 40%.
The larger detector will likely become a
reality. Also, the CXI team is involved with
an approved experiment looking at
nanocrystals on the AMO beamline at the
end of 2009.
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Sébastien Boutet
sboutet@slac.stanford.edu
Preliminary Instrument Design Review (5)
PIDR Recommendation
Post Review Resolutions
Updated Resolutions
7. It is likely that X-ray beam time for the CXI
instrument will be very limited. Therefore, it is
important for this instrument to support as much
off-line setup, testing, and diagnostic work as
possible. Off-line analysis of the sample delivery
system and sample quality, for example, should
be used to avoid unproductive beam time.
Moreover, automation should be employed where
possible (i.e. for changing micro-crystal
samples). The CXI team should decide which offline diagnostics would be most effective for this
instrument, and include them. In addition, the
team should study the user interactions and data
flow at synchrotron crystallography facilities, to
better enhance the user-friendliness of the CXI
instrument.
No off-line diagnostics are currently in
the scope of LUSI for the CXI
instrument. The instrument does
however include the capabilities for offline alignment of the beamline. As far
as off-line diagnostics are concerned,
some scope additions are already
being considered should contingency
money become available. One such
addition is a desorption-ionization laser
which allows the particle injector to be
optimized without the LCLS beam. The
LUSI team will be looking for every
opportunity to add equipment that will
allow for more efficient use of the
LCLS beam and will be working closely
with the LCLS operations organization
for these possible additions. The CXI
team is planning to visit protein
crystallography beamlines at SSRL to
study the user-friendliness of these
beamlines and learn from them.
The CXI team has been interacting
with users on software and userinterface issues. Also, LCLS is
planning to hire a scientific data
coordinator to oversee all data
analysis issues.
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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30
Sébastien Boutet
sboutet@slac.stanford.edu
Summary
Instrument accommodates a wide variety of cutting edge research
capabilities and fulfills the CD-0 mission
The CXI instrument is versatile:
X-ray optics can tailor FEL parameters for users
Sample environment can accommodate multiple experimental
configurations
User operation start planned for 2011
First call for proposals Spring 2010
CXI 2nd Scientist Position Opened
CXI Website: http://lcls.slac.stanford.edu/cxi/
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
31
31
Sébastien Boutet
sboutet@slac.stanford.edu
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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32
Sébastien Boutet
sboutet@slac.stanford.edu
Assembly with Positioning Plate Removed
Modular design
Cross-roller rails support
positioning plate and provides
low-friction, repeatable motion
Allows for
addition of tiles
in the future
Torque ring rotates to
translate Quadrant Rafts
and change aperture size
Initial detector
8 modules
Variable hole
size
Martin Nordby & Matthew Swift
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
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33
Sébastien Boutet
sboutet@slac.stanford.edu
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
34
34
Sébastien Boutet
sboutet@slac.stanford.edu
Front View—1 mm Aperture
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
35
35
Sébastien Boutet
sboutet@slac.stanford.edu
Front View—6 mm Aperture
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
36
36
Sébastien Boutet
sboutet@slac.stanford.edu
Front View—10 mm Aperture
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
37
37
Sébastien Boutet
sboutet@slac.stanford.edu
Back View with Base Plate Removed—1 mm Aperture
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
38
38
Sébastien Boutet
sboutet@slac.stanford.edu
Back View with Base Plate Removed—6 mm Aperture
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
39
39
Sébastien Boutet
sboutet@slac.stanford.edu
Back View with Base Plate Removed—10 mm Aperture
Coherent X-ray Imaging Instrument
Final Instrument Design Review, June 3 2009
40
40
Sébastien Boutet
sboutet@slac.stanford.edu
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