BIO 343 INTRODUCTION TO GENETICS LECTURER: Dr. Lisa Dorn Fall 2007 OFFICE: HS 45; LAB: HS 47 PHONE: 424-3064; E-MAIL: dorn@uwosh.edu OFFICE HRS: TBA (discuss this first day) LECTURE HOURS: 1:50 – 2:50 am in Halsey Science Building; Rm. 260 TEXT: Brooker, Genetics: Analysis & Principles (2nd edition) McGraw Hill. OBJECTIVES: Genetics and its experimental methods is one of the broadest and most rapidly evolving fields of science. I cannot possibly cover it all, so my goal is to teach you how to think like a geneticist, while learning genetics concepts so that you can judge for yourself the value of emerging genetic technologies and discoveries. This course covers Mendelian genetics and its complications, the molecular basis of genes and their affect on phenotypes, the methods of identifying and characterizing the genetic basis of diseases and other phenotypes as well as population and evolutionary genetics. The prerequisites for this course are Bio105 and 323, which by extension means you have taken Chem 105 and 106 as well as Bio111. The laboratory part of this course will expand on what you have learned in Molecular and Cell Biology (Bio 323). I will assume you have mastered the Bio323 material and will not waste much time reviewing this material. However, there will be some review of 323 materials in lab. ASSESSMENT: How are you going to earn your grade? EXAMS: 4 exams each worth 100 points. They will be mostly problems similar to those in your D2L quizzes. (400 total points). PROBLEM SOLVING: There will be 10 D2L problem-solving sessions where you will be required to solve problems that will be available on D2L. Worth 10 points each (total = 100 points). These problems are presented as quizzes. The problems will be available 1 week before they are due. During those days you are allowed to discuss potential solutions with your peers and me but once you submit your answer you cannot change it. You can only see the answers after you submit. LABORATORY: Is worth 105 points. The lab syllabus is available separately. Total Possible points = 605. 92 – 100% = A, 89-91% = AB, 82-88% = B, 79-81% = BC, 72 – 78% = C, 68 – 71% = CD, 67 – 60% = D, below 60 = F. The schedule of lectures, exams and due dates for problems. There may be minor changes to this schedule without notice. I will announce such changes in class. Lec # 1 Date 5-Sep 6-Sep 7-Sep Topics Mendels Laws; Monohybrids & Dihybrid Crosses Book Ch. 2 2 Day Wed Thursday Friday Dihybrid Crosses & Pedigrees Ch. 2 Week 1 1 1 3 Monday 10-Sep Pedigree Analysis; Probability Rules chi square Test Ch. 2 2 4 Wed 12-Sep Chromosomes; Meiosis & Mendel's rules Ch. 3: 2 Thursday 13-Sep Ch. 3: 2 5 Friday 14-Sep Sex chromosomes; Sex-Linked Traits 6 Monday 17-Sep Sex determination; recessive Lethals Ch. 3/4 3 7 Wed 19-Sep Pleiotropy; Incomplete Dominance; co-dominance Ch. 4 3 Thursday 20-Sep 8 Friday 21-Sep Gene dosage, Overdominance, 9 Monday 24-Sep Penetrance, Expressivity, Complementation Wed 26-Sep EXAM 1 (covers up to lecture 9) Thursday 27-Sep 10 Friday 28-Sep Gene interactions, Ch. 4 4 11 Monday 1-Oct Linkage and Recombination; Ch. 5 5 12 Wed 3-Oct Mapping genes: dihybrid crosses Ch. 5 5 13 Thursday 4-Oct Friday 5-Oct Trihybrid crosses Ch. 5 5 14 Monday 8-Oct Intragenic Mapping, bacteriophage Ch. 6 6 15 Wed 10-Oct Complementation tests and deletion mapping Ch. 6 6 16 Thursday 11-Oct Ch. 6 6 Friday 12-Oct Complementation tests and deletion mapping; 17 Monday 15-Oct Gene Transcription Ch. 12 7 18 Wed 17-Oct Gene Transcription Ch.12 7 Thursday 18-Oct Friday 19-Oct Post-Transcriptional Processing Ch. 12 7 Monday 22-Oct EXAM 2 (covering lectures 10 to 18) 4, 5, 6, 12 8 Wed 24-Oct Post-Transcriptional Processing Ch. 12 8 Thursday 25-Oct 21 Friday 26-Oct Transcriptional Regulation in Eukaryotes Ch. 15 8 22 Monday 29-Oct Transcriptional Regulation in Eukaryotes Ch. 15 9 23 Wed 31-Oct Transcriptional Regulation in Eukaryotes Ch. 15 9 Thursday 1-Nov Friday 2-Nov 19 20 24 Quiz 1 Due 2 3 Quiz 2 Due Ch. 4 3 Ch. 4 4 2, 3 & 4 4 4 5 Quiz 3 Due Quiz 4 Due 6 7 Quiz 5 Due 8 9 Quiz 6 Due Chromosomes: Change in Number Ch. 8 9 25 Monday 5-Nov Chromosomes: Structure; Natural Variation & Mutations Ch. 8 10 26 Wed 7-Nov Chromosomes: Polyploidy Ch. 8 10 Thursday 8-Nov 27 Friday 9-Nov Gene Mutation Ch. 16 10 28 Monday 12-Nov Gene Mutation Ch. 16 11 29 Wed 14-Nov Non-Mendelian Inheritance: X-inactivation & Imprinting Ch. 7 11 Thursday 15-Nov Friday 16-Nov 'EXAM 3 ( Lectures 19 to 28) Monday 19-Nov Non-Mendelian Inheritance: X-inactivation & Imprinting Wed 21-Nov THANKS GIVING BREAK: NO lecture 12 Thursday 22-Nov THANKS GIVING BREAK NO lab Tues or Thurs 12 Friday 23-Nov THANKS GIVING BREAK NO lecture 12 31 Monday 26-Nov Non-Mendelian Inheritance/ Quantitative Genetics Ch. 24 13 32 Wed 28-Nov Quantitative Genetics Ch. 24 13 Thursday 29-Nov 33 Friday 30-Nov 34 Monday 3-Dec Quantitative Genetics; Population Genetics 35 Wed 5-Dec Population Genetics Thursday 6-Dec 36 Friday 7-Dec Population Genetics 37 Monday 10-Dec Population Genetics/ Review Wed 12-Dec EXAM 4 (Lectures 29-37) 30 10 Quiz 7 Due 11 Quiz 8 Due 11 Ch. 7 12 13 Quantitative Genetics Quiz 9 due Ch. 24 13 Ch 24, 25 14 Ch 25 14 14 Quiz 10 Due Ch 25 14 Ch 25 15 Disputing a grade: if you feel your exam has been misgraded, you must submit a written request for re-grade within a week of the day I have passed exams back (not the day you picked it up). That request must be in writing accompanied by a copy of the exam in question that I will keep. Students With Disabilities are welcome in this class! If you need special accommodations please contact me during office hours in the first week of class. This includes students with diagnosed learning disabilities. If you feel you should be evaluated for a learning disability please contact the Project Success office at 920 4241033 or go to their website at http://www.uwosh.edu/organizations/success. Classroom Etiquette: please silence all pagers and cell phones; do not talk or whisper unless called upon in turn (but feel free to raise your hand for a question or comment at ANY time!). Incomplete Grades may be given in extreme circumstances, such as when a student becomes too ill to complete the semester's work. Please talk to me if you think your situation warrants an "I" grade and be prepared to provide documentation. 15 Late Assignment Submissions may be penalized up to one grade point (e.g. from a B to a C) at the Instructor's discretion. Make up exams. If you cannot make one exam several alternatives may be available to you depending on the rest of my teaching obligations at that time. I will do what I can, given your circumstance. If you know ahead of time that you must miss an exam (for instance if your job requires that you work that day) please let me know ahead of time.