West North West Hospital Group Galway University Hospitals Laboratory Medicine Diagnostics Directorate Medical Testing Laboratory Registration number: 223MT is accredited by the Irish National Accreditation Board (INAB) to undertake testing as detailed in the Schedule bearing the Registration Number detailed above, in compliance with the International Standard ISO/IEC 15189:2007 2nd Edition “Medical laboratories – Particular requirements for quality and competence” (This Certificate must be read in conjunction with the Annexed Schedule of Accreditation) Date of award of accreditation: 07:04:2009 Date of last renewal of accreditation: 12:03:2014 Expiry date of this certificate of accreditation: 12:03:2019 This Accreditation shall remain in force until further notice subject to continuing compliance with INAB accreditation criteria, ISO/IEC 15189 and any further requirements specified by the Irish National Accreditation Board. Manager: Chairperson: Dr Adrienne Duff Mr Tom O‘Neill Issued on 12 March 2014 Organisations are subject to annual surveillance and are re-assessed every five years. The renewal date on this Certificate confirms the latest date of renewal of accreditation. To confirm the validity of this Certificate, please contact the Irish National Accreditation Board. The INAB is a signatory of the European co-operation for Accreditation (EA) Testing Multilateral Agreement (MLA) and the International Laboratory Accreditation Cooperation (ILAC) Mutual Recognition Arrangement. Edition 10, 09/05/2014 223MT Page 1 of 35 Wilton Park House, Wilton Place, Dublin 2, Ireland Tel +353 1 607 3003 Fax +353 1 607 3109 E-mail inab@inab.ie Web www.inab.ie Schedule of Accreditation (Annex to Accreditation Certificate) Permanent Laboratory: Category A GALWAY UNIVERSITY HOSPITALS Laboratory Medicine Diagnostics Directorate Division of Clinical Microbiology Clinical Microbiology Testing Laboratory Initial Registration Date : 7-April-2009 Postal Address: Newcastle Road (Address of other locations Galway as they apply) Telephone: +353 (91) 544429 Fax: +353 (91) 544899 E-mail: frances.higgins@hse.ie Contact Name: Ms Frances Higgins Facilities: Public testing service Edition 10, 09/05/2014 223MT Page 2 of 35 Wilton Park House, Wilton Place, Dublin 2, Ireland Tel +353 1 607 3003 Fax +353 1 607 3109 E-mail inab@inab.ie Web www.inab.ie Schedule of Accreditation Permanent Laboratory: Category A THE IRISH NATIONAL ACCREDITATION BOARD (INAB) is the Irish body for the accreditation of organisations including laboratories. Laboratory accreditation is available to testing and calibration facilities operated by manufacturing organisations, government departments, educational institutions and commercial testing/calibration services. Indeed, any organisation involved in testing, measurement or calibration in any area of technology can seek accreditation for the work it is undertaking. Each accredited laboratory has been assessed by skilled specialist assessors and found to meet criteria which are in compliance with ISO/IEC 17025 or ISO/IEC 15189 (medical laboratories). Frequent audits, together with periodic inter-laboratory test programmes, ensure that these standards of operation are maintained. Testing and Calibration Categories: Category A: Permanent laboratory calibration and testing where the laboratory is erected on a fixed location for a period expected to be greater than three years. Category B: Site calibration and testing that is performed by staff sent out on site by a permanent laboratory that is accredited by the Irish National Accreditation Board. Category C: Site calibration and testing that is performed in a site/mobile laboratory or by staff sent out by such a laboratory, the operation of which is the responsibility of a permanent laboratory accredited by the Irish National Accreditation Board. Category D: Site calibration and testing that is performed on site by individuals and organisations that do not have a permanent calibration/testing laboratory. Testing may be performed using (a) portable test equipment (b) a site laboratory (c) a mobile laboratory or (d) equipment from a mobile or site laboratory Standard Specification or Test Procedure Used: The standard specification or test procedure that is accredited is the issue that is current on the date of the most recent visit, unless otherwise stated. Glossary of Terms Facilities: Public calibration/testing service: Commercial operations which actively seek work from others. Conditionally available for public calibration/testing: Established for another primary purpose but, more commonly than not, is available for outside work. Normally not available for public calibration/testing: Unavailable for public calibration/testing more often than not. Laboratory users wishing to obtain assurance that calibration or test results are reliable and carried out to the Irish National Accreditation Board criteria should insist on receiving an accredited calibration certificate or test report. Users should contact the laboratory directly to ensure that this scope of accreditation is current. INAB will on request verify the status and scope. Edition 10, 09/05/2014 223MT Page 3 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP025 1011 Bacteriology .01 Preparation of films Investigation of Urine for microscopic specimens- Microscopy and examination culture and sensitivity National Standard Methods, .02 Inoculation of cultures Health Protection Agency, .03 Microscopic UK examination of Clinical Specimens .04 Identification of organisms including antibiotic sensitivity testing .06 Detection of bacterial antigens .07 Specialised antibiotic procedures .08 Detection and characterisation of microbial DNA/RNA .99 Miscellaneous tests Specimen Type: Urines Edition 10, 09/05/2014 223MT Page 4 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 Bacteriology .01 Preparation of films Investigation of superficial and MICSOP010 for microscopic deep seated wound infections, MICSOP011 examination intravascular cannulae and MICSOP014 .02 Inoculation of cultures fluids from normally sterile MICSOP015 .03 Microscopic body sites .04 examination of National Standard Methods, Clinical Specimens Health Protection Agency, Identification of UK organisms including antibiotic sensitivity testing .06 Detection of bacterial antigens .07 Specialised antibiotic procedures .08 Detection and characterisation of microbial DNA/RNA .99 Miscellaneous tests Specimens: Swabs other than genital tract and associated specimens Pus Catheter tips Edition 10, 09/05/2014 223MT Page 5 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 Bacteriology .99 Miscellaneous tests Investigation of superficial and MICSOP010 Specimens: deep seated wound infections, MICSOP011 Bile intravascular cannulae and MICSOP014 Fluids fluids from normally sterile MICSOP015 Tissues body sites Bone National Standard Methods, Biopsies Health Protection Agency, CSFs UK Corneal lens and intraocular fluids Corneal lens Prosthetic devices Products of conception Edition 10, 09/05/2014 223MT Page 6 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 Bacteriology .01 Preparation of films Investigation of genital tract MICSOP010 for microscopic and associated specimens MICSOP013 examination .02 Inoculation of cultures National Standard Methods, .03 Microscopic Health Protection Agency, examination of UK Clinical Specimens .04 Identification of organisms including antibiotic sensitivity testing .06 Detection of bacterial antigens .07 Specialised antibiotic procedures .08 Detection and characterisation of microbial DNA/RNA .99 .99 Miscellaneous tests Specimens: Vaginal swabs, Vulval / Labial swabs Endocervical/cervical swabs Penile swabs Edition 10, 09/05/2014 223MT Page 7 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 Bacteriology .99 Miscellaneous tests Investigation of genital tract MICSOP010 Specimens: and associated specimens MICSOP013 Urethral swabs Rectal swabs National Standard Methods, Bartholins gland Health Protection Agency, aspirate UK Products of conception IUD Fallopian tube aspirate Edition 10, 09/05/2014 223MT Page 8 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology TestingLaboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP011 1011 Bacteriology .01 Preparation of films Investigation of respiratory for microscopic specimens for bacterial examination pathogens other than National Standard Methods, .02 Inoculation of cultures Mycobacteria Health Protection Agency, .03 Microscopic UK examination of Clinical Specimens .04 Identification of organisms including antibiotic sensitivity testing .06 Detection of bacterial antigens .07 Specialised antibiotic procedures .08 Detection and characterisation of microbial DNA/RNA .99 Miscellaneous tests Specimens: Sputum Bronchial Lavage/Brushings/ aspirates/washings Pleural Fluids Cough swabs Nasopharyngeal aspirates Edition 10, 09/05/2014 223MT Page 9 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP022 1011 Bacteriology .01 Preparation of films Investigation of faeces for microscopic specimens for bacterial examination pathogens National Standard Methods, .02 Inoculation of cultures Health Protection Agency, .03 Microscopic UK examination of Clinical Specimens .04 Identification of organisms including antibiotic sensitivity testing .06 .07 Detection of bacterial Detection of Helicobacter antigens pylori antigen detection in Specialised antibiotic faeces Coris Bioconcept procedures .08 .09 .99 MICSOP053 Immunostat Meridian Detection and characterisation of Identification and GeneXpert System Operator microbial DNA/RNA characterisation of Clostridium manual Xpert C.difficile Helicobacter pylori difficle using GeneXpert system Assay Instructions antigen detection from Cepheid Miscellaneous tests Specimens: Faeces Rectal swabs Edition 10, 09/05/2014 223MT Page 10 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP016 1011 Bacteriology .01 Preparation of films Screening of specimens for for microscopic Methicillin Resistant Staph examination aureus (MRSA) National Standard Methods, .02 Inoculation of cultures Health Protection Agency, .03 Microscopic UK examination of Clinical Specimens .04 Identification of organisms including antibiotic sensitivity testing .06 Detection of bacterial antigens .07 Specialised antibiotic procedures Detection and characterisation of microbial DNA/RNA .99 Miscellaneous tests Specimens: Nasal swabs Throat swabs Perineal swabs Wound swabs Swabs from other sites as clinically indicated Edition 10, 09/05/2014 223MT Page 11 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP017 1011 Bacteriology .01 Preparation of fims for Screening of specimens for microscopic Vancomycin Resistant examination Enterococci (VRE) National Standard Methods, .02 Inoculation of cultures Health Protection Agency, .03 Microscopic UK examination of Clinical Specimens .04 Identification of organisms including antibiotic sensitivity testing .06 Detection of bacterial antigens .07 Specialised antibiotic procedures .08 Detection and characterisation of microbial DNA/RNA .99 Miscellaneous tests Specimens: Rectal swabs Stoma site swab Swabs from other sites as clinically indicated Edition 10, 09/05/2014 223MT Page 12 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP018 1011 Bacteriology .01 Preparation of films Screening of specimens for for Extended Spectrum Beta microscopic lactamases (ESBL) National Standard Methods, .02 examination Health Protection Agency, .03 Inoculation of cultures UK Microscopic .04 .06 .07 examination of Screening of specimens for MICL0153 Laboratory Clinical Specimens Carbapenem Resistant Protocol for detection of Identification of Enterobacteriaceae Carbapenem-Resistant or organisms including Carbapenemase-Producing, antibiotic sensitivity Klebsiella spp. and Ecoli testing from Rectal Swabs - CDC Detection of bacterial Atlanta. antigens Specialised antibiotic .08 procedures Detection and characterisation of .99 microbial DNA/RNA Miscellaneous tests Specimens: Rectal swabs Swabs from other sites as clinically indicated Edition 10, 09/05/2014 223MT Page 13 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used MICSOP002 1011 Bacteriology .04 Identification of Antimicrobial resistance testing organisms including using disk diffusion and Vitek antibiotic sensitivity Compact from Biomerieux .07 -Performance standards for testing Antimicrobial Susceptibilty - Testing, using EUCAST and Specialised antibiotic Clinical and Laboratory procedures Standards Institute (CLSI), U.S. .99 Miscellaneous tests - Guidance notes, HPA, UK - Vitek Compact User's Guide .04 Identification of Screening of MICSOP066 Procedure for organisms including Enterobacteriaceae isolates for CPE Reference Laboratory antibiotic sensitivity Carbapenamase production MICSOP061 – RT PCR testing using phenotypic and Molecular Procedure Methods MICSOP060 – Procedure for manual DNA extraction using Qiagen DNA .08 Detection and RT-PCR for the detection of MICSOP067 – Procedure for characterisation of Pneumocyctis jirovecii in Detection of Pneumocystis microbial DNA/RNA respiratory specimens jirovecii by RT-PCR MICSOP061 – RT PCR Procedure MICSOP060 – Procedure for manual DNA extraction using Qiagen DNA Edition 10, 09/05/2014 223MT Page 14 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 Bacteriology .08 Detection and Screening of MICSOP066 Procedure for characterisation of Enterobacteriaceae isolates for CPE Reference Laboratory microbial DNA/RNA Carbapenamase production MICSOP061 – RT PCR using phenotypic and Molecular Procedure Methods MICSOP060 – Procedure for manual DNA extraction using Qiagen DNA Edition 10, 09/05/2014 223MT Page 15 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 .06 Bacteriology Qualitative detection of VIR/SOP/021 Detection of bacterial Clostridium difficile Toxins A Clostridium difficile Toxins antigens and B, in human faeces, using A and B detection using the Techlab C. Difficile TOX Techlab EIA assay SOP for A/B II ELISA assay .06 Specialised Antibiotic Rapid detection of B-lactamase Remel Nitrocefin disk kit Procedures producing bacteria insert Determination of Minimum MICSOP002 Bacterial cultures inhibitory concentrations using Etest E Test Procedure, Biomerieux Detection of Legionella antigen VIR/SOP/052 SOP for in urine samples using the Binax Legionella Urinary Antigen NOW Legionella Urinary Antigen detection using the Binax kit. NOW Legionella Urinary Antigen kit (852-000) .08 Detection and Real - Time PCR for CoA in MICSOP061 Characterisation of S.aureus MICSOP060 microbial Real-Time PCR for Group A VIR/LD/086 DNA/RNA Streptococci Applied Biosystems Real - Time PCR for MecA in Real-Time PCR System S.aureus plus/minus Assay Getting Real - Time PCR for the Started guide detection of S.pneumoniae and determination of penicillin susceptibility Edition 10, 09/05/2014 223MT Page 16 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used 1011 Bacteriology .08 Detection and RT-PCR Assay for the detection MICSOP061 – RT PCR Characterisation of of blaCTX-M group 1, group 2 & Procedure microbial group 9 in Enterobacteriaceae MICSOP060 – Procedure for DNA/RNA isolates. manual DNA extraction using Qiagen DNA MICSOP066 .05 Identification of Identification of bacterial and MICSOP068 – Identification organisms excluding fungal isolates using the Bruker of organisms using the antibiotic sensitivity MALDI Biotyper MALDI Biotyper from Bruker testing 1014 Mycology .04 Definitive Identification of bacterial and MICSOP068 – Identification identification of fungal isolates using the Bruker of organisms using the isolates MALDI Biotyper MALDI Biotyper from Bruker Sensitivity tests to Antifungal susceptibility testing MICSOP002 – Antimicrobial antifungal agents using Etest® from Biomerieux Susceptibility testing .05 procedure Edition 10, 09/05/2014 223MT Page 17 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested 1012 .01 Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used Detection and identification of MICSOP023 parasites MICSOP024 Parasitology Detection and provisional identification of .02 parasites National Standard Methods, Definitive Health Protection Agency, identification of UK parasites .99 Miscellaneous tests Specimens: Faeces Sellotape slides Duodenal/Jejunal aspirates Urine Liver/spleen aspirates BALs Blood 1013 Virology .01 Non-cultural methods Investigation of faeces of detection specimens for rota and Definitive adenovirus using an identification of Immunochromatographic test viruses kit MICSOP026 Kit insert Specimen: CSF Real - Time PCR for Herpes Simplex Virus 1 and 2 Edition 10, 09/05/2014 223MT Page 18 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested 1013 Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used RT-PCR for the detection of MICSOP064- RT PCR for the Enterovirus RNA in CSF detection of HSV-1, HSV2 specimens and Enterovirus Virology .04 MICSOP061 – RT PCR Procedure MICSOP060 – Procedure for manual DNA extraction using Qiagen DNA 1014 Mycology .01 Microscopic Investigation of specimens for MICSOP002 examination of superficial mycoses MICSOP048 Clinical Specimens MICSOP032 .02 Culture of Specimens National Standard Methods, .03 Limited identification Health Protection Agency, of isolates UK .04 .05 .99 Definitive identification of Clinical Laboratory isolates Standards Institute (CLSI) Antifungal and susceptibility testing EUCAST susceptibility using Vitek 2 testing methodologies Miscellaneous tests Vitek 2 User Manual, Skin Biomerieux Hair Nail Edition 10, 09/05/2014 223MT Page 19 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested 1015 Mycobacteriology .01 Microscopic examination of .02 .03 .05 .99 Type of test/properties measured Range of measurement Standard specifications Equipment/techniques used Investigation of specimens for MICSOP007 Mycobacteria using the MGIT 960 MICSOP008 from Becton Dickinson MICSOP057 clinical specimens MICSOP062 Culture and isolation National Standard Methods, of mycobacteria Identification of M. tuberculosis Health Protection Agency, Limited detection of Complex using Becton Dickinson UK isolates (BD) MGIT TBc identification test Becton Dickinson MGIT 960 Susceptibility testing User’s Guide Miscellaneous tests Becton Dickinson MGIT TBc Specimen Types: identification test kit insert Sputum Identification and susceptibility Cough swabs testing of Mycobacteria using Bronchial the Genotype MTBDRplus assay Lavage/Brushings from HAIN Gmbh Hain kit insert CSFs Other body fluids Pus Molecular detection of M. GeneXpert System Operator Pleural Fluids tuberculosis Complex and Manual Sputum Rifampicin resistance using Tissue GeneXpert (Cepheid) Early morning urine GeneXpert MTB/RIF Assay instructions Blood Cultures Edition 10, 09/05/2014 223MT Page 20 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1013 Virology Detection of Influenza A virus VIR/SOP/019 Detection of .04 Detection and RNA, in nose and throat swabs, Influenza A RNA; characterisation of using in-house real-time RT-PCR. VIR/SOP/045 viral DNA/RNA Nucleic acid extraction is Operation of the Easy/Mag; performed using the BioMerieux VIR/SOP/051 Operation of EasyMag instrument and real- the AB7500 time PCR is performed using the AB7500 real-time PCR instrument Detection of swine-lineage VIR/SOP/068 Detection of Influenza A virus (H1N1) RNA, in swine-lineage Influenza A nose and throat swabs, using in- (H1N1) RNA; VIR/SOP/045 house real-time RT-PCR. Nucleic Operation of the EasyMag; acid extraction is performed VIR/SOP/051 Operation of using the BioMerieux EasyMag the AB7500 instrument and real-time PCR is performed using the AB7500 real-time PCR instrument H3 subtyping, of seasonal VIR/SOP/067 subtyping of Influenza A virus, in nose and seasonal Influenza A throat swabs. Nucleic acid strains; VIR/SOP/045 extraction is performed using Operation of the EasyMag; the BioMerieux EasyMag VIR/SOP/01 Operation of instrument and real-time PCR is the AB7500 performed using the AB7500 real-time PCR instrument Edition 10, 09/05/2014 223MT Page 21 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1013 Virology Detection of Respiratory VIR/SOP/069 Detection of .04 Detection and Syncytial Virus A virus RNA, in RSV A RNA; VIR/SOP/045 characterisation of nose and throat swabs, using in- Operation of the Easy/Mag; viral DNA/RNA house real-time RT-PCR. Nucleic VIR/SOP/051 Operation of acid extraction is performed the AB7500 using the BioMerieux EasyMag instrument and real-time PCR is performed using the AB7500 real-time PCR instrument Detection of Respiratory VIR/SOP/070 Detection of Syncytial Virus B virus RNA, in RSV B RNA; VIR/SOP/045 nose and throat swabs, using in- Operation of the EasyMag; house real-time RT-PCR. Nucleic VIR/SOP/051 Operation of acid extraction is performed the AB7500 using the BioMerieux EasyMag instrument and real-time PCR is performed using the AB7500 real-time PCR instrument Detection of Influenza B virus VIR/SOP/020 Detection of RNA, in nose and throat swabs, Influenza B RNA; using in-house real-time RT-PCR. VIR/SOP/045 Operation of Nucleic acid extraction is the EasyMag; VIR/SOP/051 performed using the BioMerieux Operation of the AB7500 EasyMag instrument and realtime PCR is performed using the AB7500 realtime PCR instrument Edition 10, 09/05/2014 223MT Page 22 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1013 Virology .04 Detection and Detection of Norovirus VIR/SOP/065 Detection of characterisation of Genogroup I & II RNA. This is Norovirus Genogroup I & II viral DNA/RNA achieved using an in-house real- RNA using Real Time RT- time reverse transcription PCR polymerase chain reaction (RTPCR) and the AB7500 Sequence Detection System Detection of HIV RNA using the VIR/SOP/085 SOP for the Abbott RealTime HIV-1 assay. Abbott RealTime HIV-1 This is an in vitro reverse assay using the Abbott transcription-polymerase chain m2000sp and the Abbott reaction (RT-PCR) assay for the m2000rt systems. quantitation of Human Immunodeficiency Virus type 1 (HIV-1) in human plasma from HIV-1 infected individuals. Detection of HCV RNA using the VIR/SOP/086 SOP for the Abbott RealTime HCV assay. Abbott RealTime HCV assay This is an in vitro reverse using the Abbott m2000sp transcription-polymerase chain and the Abbott m2000rt. reaction (RT-PCR) assay for the quantitation of hepatitis C viral ribonucleic acid (HCV RNA) in human serum and plasma from HCV-infected individuals. Edition 10, 09/05/2014 223MT Page 23 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1011 Bacteriology Detection of Chlamydia VIR/SOP/085 .08 Detection and trachomatis DNA and Neisseria characterisation of gonorrhoeae DNA using the microbial Abbott RealTime CT/NG assay DNA/RNA and the m2000sp and m2000rt instruments. Detection of Chlamydia MICSOP062 trachomatis DNA and Neisseria gonorrhoeae DNA using the Cepheid Xpert CT/NG assay and the GeneXpert instrument. 1016 Serology of Infection Qualitative detection of VIR/SOP/066 Detection of .02 General serological Hepatitis B virus Surface Antigen HBs-Ag using the Architect testing in human serum and plasma, HBsAg Qualitative Assay using the Abbott Architect HBsAg Qualitative assay, and Chemiluminescent Microparticle Immunoassay (CMIA) technology. Confirmation of the presence of VIR/SOP/055 Confirmation Hepatitis B virus Surface of the presence of HBsAg Antigen, in human serum and using the Abbott Architect plasma, using the Abbott HBsAg Qualitative Architect HBsAg Qualitative Confirmatory assay. Confirmatory assay and CMIA technology. Edition 10, 09/05/2014 223MT Page 24 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Semi-quantitative detection of VIR/SOP/053 testing antistreptolysin-O antibodies, in Antistreptolysin-O latex human serum, using the Biokit agglutination test. rheumajet ASO Latex agglutination test. Qualitative detection of VIR/SOP/034 ~Detection of Hepatitis B Core Antibody, in anti-HBc using the Abbott human serum and plasma, using Architect Anti-HBc II assay the Abbott Architect Anti-HBc II assay and CMIA technology. Qualitative detection of VIR/SOP/048 Detection of Hepatitis B virus Core Antibody, anti-HBc using the in human serum and plasma, BioMerieux VIDAS Anti-HBc using the Biomerieux VIDAS Anti- Total II assay HBc Total II assay Qualitative detection of VIR/SOP/031 ~Detection of Hepatitis B virus Surface anti-HBs using the Abbott Antibody, in human serum and Architect Anti-HBs assay plasma, using the Abbott Architect Anti-HBs assay and CMIA technology. Edition 10, 09/05/2014 223MT Page 25 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Qualitative detection of VIR/SOP/055 Detection of testing Cytomegalovirus IgG antibodies, Cytomegalovirus IgG in human serum and plasma, antibodies using the Abbott using the Abbott Architect CMV Architect CMV IgG assay IgG assay and CMIA technology Qualitative detection of VIR/SOP/074 Detection of Hepatitis C Antigen, in human Hepatitis C Antigen using serum and plasma using the the Abbott Architect HCV Abbott Architect HCV Ag assay Ag assay and CMIA technology Qualitative detection of VIR/SOP/029 Detection of antibody to Hepatitis C virus, in anti-HCV using the Abbott human serum and plasma using Architect Anti-HCV assay the Abbott Architect Anti HCV assay and CMIA technology Qualitative detection of VIR/SOP/054 Detection of antibody to Hepatitis Be virus, Hepatitis BE antibody using in human serum and plasma the Abbott Architect Anti- using the Abbott Architect Anti HBe assay HBe assay and CMIA technology Edition 10, 09/05/2014 223MT Page 26 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Qualitative detection of IgG VIR/SOP/030a Detection of testing antibody to Hepatitis A virus, in Hepatitis A IgG antibody human serum and plasma, using using the Abbott Architect the Abbot Architect HAVAb-IgG HAVAB-IgG assay assay, and CMIA technology. Qualitative detection of IgM VIR/SOP/030b Detection of antibody to Hepatitis A virus, in Hepatitis A IgM antibody human serum and plasma, using using the Abbott Architect the Abbott Architect HAVAb-IgM HAVAB-IgM assay assay, and CMIA technology. Qualitative detection of VIR/SOP/033 Detection of antibody to Treponema antibody to Treponema pallidum, in human serum and pallidum using the Abbott plasma, using the Abbott Architect Syphilis TP assay. Architect Syphilis TP assay, and CMIA technology. Qualitative detection of HIV p24 VIR/SOP/027 HIV type 1 antigen, HIV-1 antibody and HIV- and HIV type 2 Ag/Ab 2 antibody, in human serum and detection using the plasma, using the Abbott Architect HIV Ag/Ab Combo Architect HIV Ag/Ab combo assay assay , and CMIA technology. Edition 10, 09/05/2014 223MT Page 27 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Qualitative detection of HIV p24 VIR/SOP/027 HIV type 1 testing antigen, HIV-1 antibody and HIV- and HIV-type 2 Ag/Ab 2 antibody, in human serum and Combo assay plasma, using the Abbott Architect HIV Ag/Ab Combo assay, and CMIA technology. Qualtiative detection of HIV p24 VIR/SOP/050 Detection of antigen, HIV-1 antibody and HIV- HIV p24 antigen, HIV-1 2 antibody, in human serum and antibody and HIV-2 plasma, using the BioMerieux antibody, using the VIDAS HIV DUO Ultra assay BioMerieux VIDAS HIV DUO Ultra assay Quantitative detection of VIR/SOP/032 Rubella IgG Rubella virus IgG using the detection using the Abbott Abbott Architect Rubella IgG Architect Rubella IgG assay assay and CMIA technology Qualitative detection of VIR/SOP/10 Detection of Hepatitis B Core IgM virus using Hepatitis B Core IgM the Abbott Architect Anti-HBc antibodies using the Abbot IgM and CMIA technology Architect Anti-HBc IgM assay. Edition 10, 09/05/2014 223MT Page 28 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Qualitative detection of IgM VIR/SOP/082 SOP for the testing antibody to Parvovirus B19, operation and management using the LIAISON Biotrin of LIAISON analyser Parvovirus B19 IgM and the LIAISON instrument Qualitative detection of IgG VIR/SOP/082 SOP for the antibody to Parovirus B19, using operation and management the LIAISON Biotrin Parvovirus of LIAISON analyser B19 and IgG assay and the Liaison instrument Quantitative detection of IgG VIR/SOP/082 SOP for the antibody to Varicella Zoster operation and management virus using the LIAISON VZV IgG of the LIAISON analyser assay and the LIAISON instrument Qualitative detection of VIR/SOP/078 Detection of Toxoplasma gondii IgM Toxoplasma gondii IgM antibodies, using the Abbott antibodies using the Abbott Architect Toxoplasma IgM assay Architect Toxo IgM assay and CMIA technology Edition 10, 09/05/2014 Qualitative detection of VIR/SOP/079 Detection of Cytomegalovirus IgM antibodies Cytomegalovirus IgM using the Abbott Architect CMV antibodies using the Abbott IgM assay and CMIA technology Architect CMV IgM assay 223MT Page 29 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Quantitative detection of VIR/SOP/080 Detection of testing Rubella virus IgM using the Rubella IgM antibodies Abbott Architect Rubella IgM using the Abbott Architect assay and CMIA technology Rubella IgM assay Qualitative detection of VIR/SOP/063 ~Detection of antibodies to Treponema antibodies to Treponema pallidum in human serum or pallidum using the Serodia- plasma, using the Serodia-TP-PA TP-PA particle particle agglutination test. agglutination test. Semi-quantitative detection of VIR/SOP/064 RPR Card test anti-cardiolipin antibodies, in human serum, using the BD RPR Card Antigen flocculation test Qualitative detection of IgG VIR/SOP/082 SOP for the antibodies to Borrelia operation and management burgdorferi, using the LIAISON of the LIAISON analyser Borrelia IgG assay and the LIAISON instrument. Qualitative detection of IgM VIR/SOP/082 for the antibodies to Borrelia operation and management burgdorferi, using the LIAISON of the LIAISON analyser Borrelia IgM II assay and the LIAISON instrument. Edition 10, 09/05/2014 223MT Page 30 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection .02 General serological Qualitative detection of IgM VIR/SOP/082 for the testing antibodies to Varicella Zoster operation and management virus using the Liaison VZV IgM of the LIAISON analyser assay and the LIAISON instrument Qualitative detection of IgG VIR/SOP/082 SOP for the antibody to Measles Virus, using operation and management the LIAISON Measles IgG assay of the LIAISON analyser and the LIAISON instrument Qualitative detection of IgG VIR/SOP/082 SOP for the antibody to Mumps Virus, using operation and management the LIAISON Mumps IgG assay of the LIAISON analyser and the LIAISON instrument Qualitative detection of anti- VIR/SOP/075 Detection of EBV VCA IgM in human serum EBV VCA IgM using the using the VIDAS EBV VCA IgM Vidas Enzyme Linked Fluorescent Assay Qualitative detection of anti- VIR/SOP/076 Detection of EBV VCA IgG and anti-EBV EA IgG EBV VCA/EA/IgG using the in human serum using the VIDAS VIDAS EBV VCA/EA IgG Enzyme Linked Fluorescent Assay Edition 10, 09/05/2014 223MT Page 31 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection Qualitative detection of VIR/SOP/083 .02 General serological Clostridium difficile toxin A and CDT testing on the Vidas Testing toxin B in stool specimens using SOP for the VIDAS® C. difficile Toxin A & B assay. Quantitative detection of IgG VIR/SOP/084 SOP for antibody to Rubella virus using RUG testing on the Vidas the VIDAS®RUB IgG II assay. Qualitative detection of IgM VIR/SOP/015 SOP for antibody to Measles Virus, in detecting Measles IgM human serum and plasma, using using the microimmune the Microimmune Measles IgM Measles IgM capture EIA Capture EIA assay. assay (MeVM010) Qualitative detection of IgM VIR/SOP/016 antibody to Mumps Virus, in Mumps IgM detection using human serum and plasma, using Microimmune Mumps IgM the Microimmune Mumps IgM capture EIA assay (Ref: Capture EIA assay. MuVM004) Qualitative detection of IgM VIR/SOP/009 antibodies to Coxiella burnetti Fever SOP for SOP for Q in human serum and plasme using the Panbio Coxiella Burnetti (Q Fever) IgM ELISA assay. Edition 10, 09/05/2014 223MT Page 32 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A Clinical Microbiology Testing Laboratory INAB Classification number (P9) Materials/products tested Type of test/calibration or property measured, and range of measurement Relevant standard or documented procedure used 1016 Serology of Infection Qualitative detection of VIR/SOP/047 Detection of .02 General serological Hepatitis B virus e antigen, in Hepatitis Be antigen using testing human serum and plasma, using the Biomerieux VIDAS the Biomerieux VIDAS HBe/Anti- HBe/Anti-HBe assay HBe assay Qualitative detection of anti- VIR/SOP/077 Detection of EBV EBNA IgG in human serum EBV EBNA IgG using the using the VIDAS EBV EBNA IgG VIDAS Enzyme Linked Fluorescent Assay Qualitative detection of Toxoplasma gondii IgG VIR/SOP/-72 Dectection of antibodies in human serum and Toxoplasma gondii IgG plasma, using the Abbott antibodies using the Abbott Architect Toxoplasma IgG assay Architect Toxo IgG assay and CIMA technology Edition 10, 09/05/2014 223MT Page 33 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A National Salmonella Shigella & Listeria Reference Laboratory (NSSLRL) INAB Classification number (P9) Materials/products tested Type of test/properties measured Range of measurement 1011 Bacteriology .06 Detection of Bacterial Antigens Serotyping of Salmonella species and Identification and typing of Typhoidal salmonella Listeria monocytogenes serotyping .05 Bacteriology Biochemical differentiation of Identification of organisms Salmonella subspecies including antibiotic and sensitivity testing Susceptibility testing using the Sensititre from TREK diagnostic and the EUCAST Disk diffusion methods .08 Bacteriology RT-PCR assay for the Detection and identification of Salmonella characterisation of tartrate positive isolates microbial DNA/RNA Standard specifications Equipment/techniques used NSRLSOP002 NSRLSOP005 NSRLSOP009 NSRLSOP003 and NSRLSOP008 NSRLSOP029 RT-PCR for detection of IpaH (Shigella) and 16s RNA (bacterial DNA) .06 Bacteriology Detection of Bacterial Antigens and Bacteriology Identification of organisms including antibiotic sensitivity testing Edition 10, 09/05/2014 Phage typing of Salmonella Typhimurium/S.Enteritidis and Molecular Subtyping of nontyphoidal Salmonella serotypes and Shigella sonnei by Pulsed Field Gel Electrophoresis (PFGE) and S. Typhimurium MLVA and Multiplex PCR protocols for Salmonella and Shigella species NSRLSOP004 Identification and typing of Shigella spp NSRLSOP010 and NSRLSOP013 and NSRLSOP007 and NSRLSOP011 NSRLSOP018 and Suscptibility testing using the Sensititre from TREK diagnostic And the EUCAST disk diffusion methods 223MT Page 34 of 35 Scope of Accreditation Permanent Laboratory: Galway University Hospital Category A National Salmonella Shigella & Listeria Reference Laboratory (NSSLRL) INAB Classification number (P9) Materials/products tested .08 Bacteriology Detection and characterisation of microbial DNA/RNA Edition 10, 09/05/2014 Type of test/properties measured Range of measurement Molecular Subtyping of Listeria monocytogenes by Pulse-Field Gel Electrophoresis (PFGE) 223MT Standard specifications Equipment/techniques used NSRLSOP014 Page 35 of 35