i COMPARISON OF WATER QUALITY AND HABITAT ASSESSMENT BETWEEN WETLAND AND RIVER NURUL HANA BINTI MOKHTAR KAMAL A project report submitted in partial fulfillment of the requirements for the award of the degree of Master of Engineering Faculty of Civil Engineering Universiti Teknologi Malaysia JUNE 2009 iii My special dedication to my family: My beloved Abah and Mama, Mokhtar Kamal Muslimina and Rusmina Md Radzi Thank you for always being there whenever I need you the most My dearest sisters and brothers Nurul Izzah Nurul Asyikin Mohamad Faiz Mohamad Naim and Mohamad Azim iv ACKNOWLEDGEMENT First and foremost, I would like to express my greatest gratitude towards my supervisor, Assoc. Prof. Dr. Mohd Ismid Mohd Said for his encouragement, guidance, advices and motivation. Without his continuous support and guidance in completing this report, it would not have been completed successfully. Also my sincere appreciation to my co-supervisor, Dr. Shamila bt Azman for her attention and never waver support towards the completion of this report. For all my best friends, thank you for always being helpful and supportive. Herni Halim as my co-researcher, thank you for always being hardworking and informative. For Mardiyah Zahidi, thank you for a being a big help in the drawings completion. Also, not forgotten, Harizah Hamzah, Sarah Adnan, Hafizah Hussian, and Nabilah Abdullah, thank you for helping in laboratory works, transportation and moral support. I also would like to share my highest gratitude towards all staffs of Environmental Engineering Laboratory, Universiti Teknologi Malaysia; Pak Usop, Mr. Ramli, Mr. Azreen, Mr Suhaimi, Miss Shuhada and Mrs Ros for their help during the experiments. Without their assistance the report will not be completed. Last but not least, my thousand thanks to all that might not be listed above who have contributed in the completion of this thesis either directly or in directly. v ABSTRACT River management trend nowadays always concentrate on beautifying and aesthetical improvement along a small stretch that is considered polluted; without taken into consideration the affect of water flowing from the watershed. Previously, the main concern was the functional uses of a stream such as erosion control where quite often the biotic factors of a river are overlooked. Furthermore, wetlands are usually drained as they hold great potentials to be transformed into agricultural land without considering the impact to the wetland values and functions. Thus, this study intends to emphasize on the importance of habitats and fish species to be implemented on river and wetland rehabilitation studies. Three rivers with different physical condition and land uses were selected for habitat assessment; i.e. Sungai Lukah Wetland in Ulu Sedili Kecil, Sungai Tui in Bukit Kepong, and Sungai Mengkibol in Kluang. Sungai Lukah, which is a part of freshwater swamp area of Ulu Sedili Kecil was classified as Class III using Water Quality Index (WQI). Regardless of the water quality, the swampy area of Sungai Lukah provides a suitable environment for swamp fishes that was dominated by Cyprinidae as they exist in abundance. Besides the importance of hydrological and biogeochemical function of Lukah wetland, it also provides food, spawning ground and protection from predators for the aquatic ecosystem. In contrast, Sungai Tui, which is a tributary from Sungai Muar, eventhough classified as Class III in WQI, provides a rich and diverse fish and crustaceans communities with high commercial value such as Udang Galah. On the other hand, Sungai Mengkibol which was classified in Class IV served as main storm drain for Kluang town and is only inhabited by hard and tolerant species. vi ABSTRAK Pengurusan sungai dan saliran masa kini pada kebiasaannya hanya menumpukan pada kerja-kerja pencantikan di sepanjang saliran yang dianggap tercemar tanpa mengambil kira kesan kualiti air yang mengalir daripada kawasan tadahan ke dalam saliran tersebut. Sebelum ini, kepentingan sungai hanya dipandang dari segi fungsinya, di mana kebiasaannya kaedah pemuliharaan yang diutamakan adalah seperti kawalan hakisan tetapi mengabaikan kepentingan biotik sungai tersebut. Tambahan pula, telah menjadi suatu kebiasaan bagi tanah bencah dikeringkan kerana ia berpotensi tinggi untuk dijadikan sebagai kawasan pertanian, tanpa mengambil kira kesan terhadap nilai dan fungsi tanah bencah tersebut. Oleh itu, kajian ini bertujuan untuk menekankan kepentingan peranan sesebuah habitat dan komposisi spesies ikan dalam sesuatu kajian yang melibatkan pemuliharaan sungai dan tanah bencah. Tiga sungai yang berbeza keadaan fizikal serta penggunaan tanah telah dipilih untuk penilaian habitat iaitu tanah bencah Sungai Lukah di Ulu Sedili Kecil, Sungai Tui di Bukit Kepong, dan Sungai Mengkibol di Kluang. Sungai Lukah yang juga merupakan sebahagian daripada kawasan tanah bencah air tawar di Ulu Sedili Kecil, telah diklasifikasikan sebagai Kelas III mengikut Indeks Kualiti Air (WQI). Walaupun kualiti air di kawasan tanah bencah Sungai Lukah berada di dalm Kelas III, ia menyediakan persekitaran yang sempurna untuk spesies ikan di kawasan tersebut yang banyak dijumpai terutamanya dari keluarga Cyprinidae. Selain daripada kepentingan fungsinya dari sudut hidrologi dan biogeokimia, kawasan tanah bencah tersebut juga menyediakan sumber makanan, kawasan pembiakan, dan juga perlindungan daripada pemangsa kepada hidupan akuatik di situ. Sebaliknya, bagi Sungai Tui yang merupakan salah satu anak sungai bagi Sungai Muar, mempunyai banyak spesies ikan dan udang dengan nilai komersil yang tinggi seperti Udang Galah sungguhpun dikelaskan sebagai Kelas III. Walau bagaimanapun, Sungai Mengkibol yang dikelaskan sebagai Kelas IV dan merupakan saliran utama di tengah Bandar Kluang dan hanya mampu menampung spesies ikan yang tahan lasak. vii TABLE OF CONTENTS CHAPTER 1 2 TITLE PAGE DECLARATION ii DEDICATION iii ACKNOWLEDGEMENTS iv ABSTRACT v ABSTRAK vi LIST OF CONTENTS vii LIST OF TABLES x LIST OF FIGURES xi LIST OF APPENDICES xv INTRODUCTION 1 1.1 Introduction 1 1.2 Statement of Problem 4 1.3 Objectives of Study 5 1.4 Scope of Study 5 LITERATURE REVIEW 6 2.1 Wetland 6 2.1.1 Wetland Classification 9 2.1.2 Functions, Values and Benefit of Wetlands 12 2.1.2.1 Physical/ Hydrological Functions 13 2.1.2.2 Chemical Functions 14 2.1.2.3 Biological Functions 15 viii 2.2 2.3 2.4 3 4 5 2.1.3 Hydrology of a Freshwater Wetland 16 2.1.4 Biogeochemistry of a Freshwater Wetland 19 Lotic Ecosystem 20 2.2.1 22 Physical Characteristics of a River 2.2.2 Value of a River 25 Stream Health 27 2.3.1 Physico-Chemical Assessment 28 2.3.2 Habitat Assessment 29 2.3.3 Bioassessment 30 Freshwater Fish Species in Malaysia 31 2.4.1 Family Cyprinidae 32 2.4.2 Family Channidae 33 2.5 Diversity 35 2.6 Wetland Management for River Improvement 36 STUDY AREA 38 3.1 Introduction 38 3.2 Sungai Lukah Wetland, Ulu Sedili Kecil 39 3.3 Sungai Tui, Bukit Kepong 44 3.4 Sungai Mengkibol, Kluang 47 METHODOLOGY 51 4.1 Introduction 51 4.2 Fieldwork 53 4.2.1 Assessment of Fish Composition 53 4.2.1.1 Fish Species Composition 54 4.2.1.2 Total Length 54 4.2.1.3 Total Weight 56 4.2.2 Characterization of River Habitats 56 4.3 Water Quality Assessment 60 4.4 Diversity Index 62 RESULTS AND DISCUSSIONS 63 5.1 63 Fish Species Composition ix 6 7 5.1.1 Fish Assemblages in Sungai Lukah 63 5.1.2 Fish Assemblages in Sungai Tui 67 5.1.3 Fish Assemblages in Sungai Mengkibol 73 5.2 River Habitat Survey 77 5.3 Water Quality Assessment 82 5.4 Diversity and Species Richness 85 5.5 Fish Assemblages, Physical Characteristics, Water Quality Relationship 86 5.5.1 87 Species Migration and Introduced Species 5.5.2 Water Clarity and Vegetation 88 5.5.3 Woody Debris, Vegetation and Bed Material 89 CONCLUSIONS AND DISCUSSION 90 6.1 Conclusion 90 6.2 Recommendations 92 REFERENCES 93 APPENDICES 99 x LIST OF TABLES TABLE NO. TITLE PAGE 3.1 Location and coordinates of study site 39 4.1 DOE Water Quality Index classification 60 4.2 Interim Standard 61 Fish species and local name caught at Sungai 64 National Water Quality classification 5.1 Lukah 5.2 Relative abundance of each species caught in 66 Sungai Lukah 5.3 Fish species composition caught in Sungai Tui 68 5.4 Relative abundance and total weight of each 71 species caught at Sungai Tui 5.5 Size range of specimens caught at Sungai Tui 72 5.6 Fish species composition caught in Event I, II 74 and III at Sungai Mengkibol 5.7 Relative abundance and weight of each species 76 caught in Sungai Mengkibol 5.8 Size range of specimens caught at Sungai 77 Mengkibol 5.9 Range of values of channel form and instream 80 habitat characteristic in Sungai Tui 5.10 Range of values of channel form and instream 81 habitat characteristic in Sungai Mengkibol 5.11 INWQS results for water quality parameters 84 5.12 Shannon’s H and Evennes, EH value 85 xi LIST OF FIGURES FIGURE NO. 2.1 (a) and (b) TITLE Wetlands are often located (a) between dry PAGE 8 terrestrial systems and permanently flooded deepwater aquatic systems such as rivers, lakes, estuaries, or oceans or (b) as isolated basins with little outflow and no adjacent deepwater system. 2.2 Diagrammatic sketch of wetland types 12 2.3 Conceptual diagram illustrating the effects of 17 hydrology on wetland function and the biotic feedbacks that affect wetland hydrology. Pathway A and B are feedbacks to the hydrology and physicochemistry of the wetland 2.4 The effects of flooding upon fish using the 19 floodplains of tropical rivers 2.5 Zones of an ‘ideal’ fluvial system 24 2.6 Associations of geomorphic pattern and their 25 ecological implications 2.7 Theoretical relationship between physical habitat 29 quality and biological condition 2.8 Some of the most common Cyprinids species in 33 Malaysian freshwater 2.9 Some of the most common Channa species in 35 Malaysian freshwater 3.1 The location of Sungai Lukah and the sampling sites (the dark blue lines are the main distinguished rivers) 40 xii 3.2 The hilltop view of the valley and Sungai Lukah 41 wetland. 3.3 Wetland area that has been turned into palm oil 41 plantation 3.4 Sampling site at Sungai Lukah Wetland 42 3.5 The upstream area of Sungai Lukah (Ulu Lukah) 43 3.6 The location of Sg Tui and its sampling site 44 3.7 Sungai Muar near the old Bukit Kepong police 45 station 3.8 The old Bukit Kepong Police Station 46 3.9 Palm oil plantation is the dominant landuse 46 around the study area 3.10 The location of the sampling reach for Sungai 47 Mengkibol 3.11 Sungai Mengkibol runs through the commercial 48 areas in Kluang town. 3.12 The riverbanks that are stabilized with concrete 49 wall 3.13 Sungai Mengkibol Riverine Park 50 3.14 The waste water treatment plant that discharge the 50 effluent into Sungai Mengkibol 4.1 Flowchart of research study 51 4.2 Measurement of total length by using measuring 55 board 4.3 Tilapia, showing certain morphological characters 55 and their measurement 4.4 Weight measurement using weighing scale 56 4.5 Cross-section of channel showing definitions used 57 to define where spot-check recording and channel dimensions measured 4.6 Examples of the location and type of physical features of a river channel 58 xiii 5.1 The total of all events for fish families obtained in 66 Sungai Lukah 5.2 The families obtained during Event I at Sungai 69 Tui 5.3 The families obtained during Event II at Sungai 69 Tui 5.4 The families obtained during Event III at Sungai 70 Tui 5.5 Families obtained for Event I in Sungai 74 Mengkibol 5.6 Families obtained for Event II in Sungai 75 Mengkibol 5.7 Families obtained for Event III in Sungai 75 Mengkibol 5.8 The wetland area that is permanently inundated 78 and filled with wetland vegetation 5.9 A submerged woody debris 79 5.10 Bed and bank sediments at the downstream of 80 Sungai Lukah 5.11 Estimated relative abundance of channel units for 82 the rivers 5.12 Water Quality Index of the respective rivers 83 5.13 Diversity, Shannon’s H and evenness, EH for the 86 respective rivers LIST OF APPENDICES APPENDIX TITLE PAGE A Habitat Survey Form 99 B Sketches of Sungai Lukah 107 C Sketches of Sungai Tui 109 D Sketch of Sungai Mengkibol 114 E Fish species caught in Sungai Lukah 116 F Fish species caught in Sungai Tui 121 G Fish species caught in Sungai Mengkibol 126 CHAPTER I INTRODUCTION 1.1 Introduction Water is a widespread, life-sustaining substance, comprising some 50-90% of living materials and covering nearly three-fourth of the Earth’s surface (Gordon et. al., 2004). However, out of the Earth’s total moisture, about 97% comprise of the ocean meanwhile less than 0.0002% are flowing in the streams and rivers. The water is recycled globally, and as the earth warms and cools the relative proportions of ice, water vapour, fresh water and salt water changed. Freshwater is a renewable but limiting natural resource. As availability of freshwater in freshwater ecosystems decreases, nature restores it through the water cycle in the form of precipitation. Freshwater can only be renewed through the process of the water cycle, where water from seas, lakes, rivers, and dams evaporates, forms clouds, and returns to water sources as precipitation. However, if more freshwater is consumed through human activities than is restored by nature, the result is that the quantity of 2 freshwater available in lakes, rivers, dams and underground waters is reduced which can cause serious damage to the surrounding environment. Freshwater is needed not only to fulfill human daily needs such as for drinking and washing but also plays the role in generating electricity, as machines cooler fluid and used for agricultural purposes. Nevertheless, nowadays human seems to treat the freshwater ways as a ‘dumping site’ for every daily activities. For instance, changing landscape for the use of agriculture creates a great effect on flow of freshwater and surrounding. Reshaping a large scale of landscape to creating lands that are suitable for agriculture changed the flow and sustainability of freshwater which result in effecting the sustainability of the local ecosystem. Changes in landscape through the removal of trees and soils changed the local environments flow of freshwater and also effect the cycle of freshwater. As a result more freshwater are consumed and stored in soil which benefits agriculture. However, since agriculture is the human activity that consumes the most freshwater, freshwater would be used up completely which result in scarcity and destroy of local ecosystem. Redesigning lands for the maximum use of agriculture will certainly bring a great damage to the environment and reduces the available freshwater supply since freshwater is a limiting natural resource. In the past, wetlands were considered as worthless and only as wasteland and the only themes when considering them are changing and transforming. Wetlands are usually drained as they hold a great potential to be transformed into agricultural land. Apart from that, their flatness, coastal location and apparent worthlessness made them obvious location for large plants, harbours and waste disposal. Even though wetlands were such major landscape, but only since late 1960s that they had engaged the scholar attention to understand their variety and complexity, yet essential unity (Williams, 1990). Unlike other landscapes of comparable size, wetlands are not climatically based although they occupied 6% of earth’s surface. contiguous stretches of land. Wetlands, as a result do not occupy large 3 The most frequent question that the amateur would ask about wetlands is “What is wetland?” or “Is that some kind of swamp?” Since there are so many terms for wetlands, it is often confusing and some are even contradictory. According to Mitsch and Gosselink (2000), during the 19th century during the time where wetland drainage was the norm, a wetland definition was unimportant as it was considered desirable to produce uplands from wetland by draining them. As a matter of fact, the term ‘wetland’ was only commonly used during the mid-20th century. The simplest definition of wetlands is lands with soils that are seasonally inundated. Except Antarctica, wetlands were ubiquitous and found in nearly every climatic zone from the tundra mires of the poles to the tropical mangroves of the equator, and in every continent. River management and rehabilitation trend nowadays has always concentrating on beautifying and aesthetical improvement along a small stretch that is considered polluted; without taken into consideration the affect of water flowing from the watershed. With increasing knowledge and technology, it appears that in river rehabilitation works there is an urgent need to restore the natural hydrology and morphology simultaneously in order to recover the river ecology (Brookes and Shield, 1996). Therefore, to manage rivers effectively, it is a must to first measure the availability and condition of the resources. In earlier studies, the stream was only evaluated in terms of physico-chemical parameters as to stress on the functional use of the resource. Evidently, physico-chemical parameters are still important, but nowadays the ‘stream health’ is the main importance. The ‘stream health’ measurement takes into consideration the water quality, habitat availability and suitability, energy sources, hydrology and the biota themselves (termed bioassessment) (Gordon et. al., 2004). However, stream and river chemistry and morphology have been altered drastically as a result of wetland loss and visa versa. Thus, in order to achieve the best result in river rehabilitation work, the quality of the catchment area of a stream or river should be improved first. This is because rivers, streams, and wetlands work as integrated ecosystems in maintaining stability and function of a water body. 4 1.2 Statement of Problem Previously, stream management has only been focusing on the functional uses of streams where the main factors of concern were the amount of water available, and the quality of water with respect to its suitability for agricultural, industrial, domestic or recreational use. Often overlooked the consequences in terms of habitat loss during the attempt to put the freshwater sources to productive use and to tame and control floodwaters and their pathways. However, the level of environmental awareness has now reach a point where many of the modification of streams and their catchments have been viewed by a large sector of society as undesirable and in need of some alteration. As a result of increasing knowledge on streams many had realized that protection of natural ecological process in streams would be a great aid in protecting the some of their functional values, although there will still be conflicts over the best way to use the resources. The increasing complexity of water-resource problems and the overwhelming amount of information available had formed a need for a multi-disciplinary team that include zoologist, botanist, microbiologist, geomorphologist, hydrologist, economist, communicators, hydraulic engineers, chemists, anthropologists, and sociologist (King & Brown, 2003). Generally, maximum biotic diversity is maintained in streams by a level of disturbance that creates environmental heterogeneity, yet still allows the establishment of communities. 5 1.3 Objectives of Study This research is to identify the composition of fish species and its habitat for its significance as one of the biological factor in the river rehabilitation progamme. Hence, the objectives of this research are as listed followed: i) To describe and quantify the existing biological aquatic environment in wetland area and river in terms of fish species composition and spatial distribution; ii) To differentiate and describe the physical features of wetland and river habitat; iii) To assess the wetland and river status according to water quality condition; and iv) To describe the relationship between fish species composition, and river/wetland morphological condition 1.4 Scope of Study This study covered the existing ecological environment of three rivers which display different degree of disturbance, physical conditions and landuse: Sungai Lukah (mildly disturbed/freshwater wetland), Sungai Tui (mildly disturbed / suburban river), and Sungai Mengkibol (highly disturbed/urban river). For the existing environment characterization, it is based on physical characteristics (stream structure, instream habitats, etc), biological characteristics (fish species), and chemical characteristics (water quality parameter). In addition, this study also involves in describing the relationship between physical characteristics of a stream and landuse with the fish assemblages. CHAPTER II LITERATURE REVIEW 2.1 Wetland Wetlands are one of the most biologically diverse and productive ecosystems on earth. They occur on almost all continents (except Antarctica), in all climatic zones, on the coast, inland, and can be formed naturally or man-made. The term ‘wetland’ is a relatively new one to describe the landscape that many people knew before under different names. During the Ramsar Convention in 1971, the wetland is defined as “areas of marsh, peat land, or water, whether natural or artificial, permanent or temporary, with water that is static or flowing, fresh brackish or salt, including areas of marine water the depth of which at low tide does not exceed 6 meters”. However, there are many more terms that describe different type of wetlands such as swamp, marsh and mire that have been used over the years. Each of the terms has a specific meaning to some, and many are still widely used by both scientist and laypersons alike. Some of the most common wetland terms used is listed as follows: 7 i) Fen : A peat accumulating wetland that receive some drainage from surrounding mineral soil and usually support marshlike vegetation. ii) Mangrove : Subtropical and tropical ecosystem dominated by halophytic trees, shrubs, and other plants growing in brackish to saline tidal waters. The word ‘mangrove’ also refers to the dozens of trees and shrub species that dominate mangrove wetland. iii) Marsh : A frequently or continually inundated wetland characterized by emergent herbaceous vegetation adapted to saturation soil conditions iv) Mire : Synonymous with any peat-accumulating wetland v) Swamp : Wetland dominated by trees or shrubs (U.S. definition). In Europe, forested wetlands dominated by reed grass (Phragmites) are also called swamps. The main criteria that would distinguish a wetland are the area must be permanently or seasonally inundated, the area must be able to support hydrophytic vegetation and also the soil in the area must be water logged for a sufficient time to be anaerobic (Burke et al., 1988). in addition, according to Mitsch and Gosselink (2007), all wetlands have some features in common: (a) all have shallow water or saturated soil; (2) all accumulate organic plant material that decomposes slowly; and (3) all support a variety of plants and animals adapted to the saturated conditions. The following Figure 2.1 illustrates the location of wetlands. 8 (a) (b) Figure 2.1: Wetlands are often located (a) between dry terrestrial systems and permanently flooded deepwater aquatic systems such as rivers, lakes, estuaries, or oceans or (b) as isolated basins with little outflow and no adjacent deepwater system. (Source: Mitsch and Gosselink, 2007) 9 Wetlands are important components of watersheds and provide many valuable functions to the environment and to society (U.S. EPA, 2002). Wetland ecosystem functions include the transfer and storage of water, biochemical transformation and storage, the production of living plants and animals, the decomposition of organic materials, and the communities and habitats for living creatures (Richardson 1994). Based on these and other ecological functions, wetlands provide “values” to humans and naturally functioning ecosystems. Important values include, but are not limited to, flood control, filtering and cleansing water, erosion control, food production (shrimp, ducks, fish, .), timber production, recreation (boating, fishing, bird watching, .), winter deer yards, and habitat for plants and animals, including many rare or endangered species. 2.1.1 Wetland Classification The definition and classification of wetlands has gone through many stages. According to Williams (1990), the most elaborate categorization is that formulated by the Fish and Wildlife Service (FWS) of the United States in 1979 as a response to the new protective legislation of two years before and to facilitate the making of an inventory of the natural wetlands in the country. The wetlands were then classified into five major divisions or systems, each which share similar locationalgeomorphological, hydrological and biological characteristics, were recognized. There are the coastal wetlands which include marine and estuarine wetlands and the interior wetland that are riverine, lacustrine and palustrine wetlands. In this classification, the first four systems include wetland and deep water habitats, but the palustrine includes only wetland habitat. The descriptions of all five classes according to Idaho Fish and Game (2007) are as follows: 10 i) Marine Wetlands (saltwater wetlands along coasts) Water levels rise and fall with the daily tides; they can be subject to the force of waves and storms and to ocean currents. Characteristics of marine wetlands vary with the level of tidal, wave, and current effects. Salt-tolerant plants called halophytes are dominant. Common halophytes include grasses such as Spartina species. Subtidal marine wetlands are submerged continuously; intertidal marine wetlands are periodically exposed. ii) Estuarine Wetlands (Coastal wetlands within estuaries) Estuarine wetlands usually have some access to oceans, with significant inflows of freshwater. Water levels rise and fall with the daily tides and can be subject to the force of waves and storms. Characteristics vary with the level of tides, waves and amount of salinity, which can vary with location and interactions with oceans and freshwater sources. Halophytes are dominant. Subtidal estuarine wetlands are submerged continuously, while intertidal estuarine wetlands are only periodically exposed. iii) Riverine Wetlands (wetlands in the channels of rivers and streams) Riverine wetlands which are also known as riparian areas occur along streams, rivers, and irrigation canals. Riverine wetlands play an essential role in maintaining healthy streams and rivers. They typically support dense stands of trees such as cottonwood and quaking aspen, shrubs such as mountain maple and red alder, and grasses. These plants help bind the soil of banks, protect the banks from erosion during floods, and trap additional sediment from floodwaters. The plants also provide habitat for wildlife. For example, birds use riparian areas for cover from the weather and for breeding, resting, and foraging sites. Many species of fishes are dependent on healthy riverine wetlands and riparian areas for survival. 11 iv) Lacustrine Wetlands (wetlands around lakes and reservoirs) These freshwater wetlands form around the perimeter of lakes and reservoirs. They are larger than twenty acres or contain water depths of six feet. Like marine and estuarine wetlands, lacustrine wetlands are exposed to wave action. v) Palustrine Wetlands (isolated, inland wetland not associated with lakes or reservoirs) Smaller and shallower than lacustrine wetlands, palustrine wetlands include marshes, wet meadows, bogs, potholes, and playas. Palustrine wetlands may be connected by surface or groundwater to rivers or lakes, or they may be isolated. Forested palustrine wetlands occur in areas with abundant moisture, such as in the mountains. Forested wetlands are easily missed, but if you walk into a forest wetland, your senses will detect the difference. The air is often cooler, the ground damp if not soggy. Ferns and mosses may be abundant and other understory plants thicker. Figure 2.2 shows the distribution of these five systems diagrammatically. 12 Figure 2.2: Diagrammatic sketch of wetland types (Source: Williams, 1990). 2.1.2 Functions, Values and Benefit of Wetlands The recent rise in awareness of the importance of wetlands has much to do with an enhanced appreciation of their many positive, ecological and environmental functions and the values that society puts on those functions. There are many ways in categorizing wetland functions and values. Tiner (1984) provided three categories; fish and wildlife values, environmental quality values, and socioeconomic values. Whereas the OTA report (OTA, 1984) gave two categories; intrinsic values and ecological services and ecological services and resource values. 13 However according to Williams (1990), there were four broad categories of functions were employed; physical/hydrological, chemical, biological and socio-economic. 2.1.2.1Physical/ Hydrological Functions Mainly in the lowland areas, flood is the main hazard to human occupation. Constantly being reclaimed and dried up, wetland hold the key to flood mitigation. Wetlands play the role to temporarily store the runoff water and thereby protect the downstream localities which are often former wetlands now reclaimed. By this way, the flood bank-full height is reduced and the moving water velocity is reduced. The slow water movement from a number of tributaries is thus ‘desynchronized’ with the flood water reaching the same channel at different period. Due to the tsunami event that had destroyed most of Acheh in Indonesia in 2004, the function of coastal marshes in protecting the shoreline has been highlighted. It is clear that coastal marshes could absorb wave energy and reduce erosion on the shoreline, and so buffer the land from storm. According to Knutson (1978) more than 50 percent of wave energy could be dissipated within the first 2.5 m of marsh, 80 percent at 10 m and is virtually eliminated at 30 m. Wetlands also play the role of trapping sediments, therefore it could clear suspended matter in both marine and fresh water, thereby improve water quality. The range of deposition could be between 2 and 45 mm/yr, although extremes of many meters have been known to occur in sheltered estuaries and river outfall. Sedimentation is greater with slower flowing water and entrapment is enhanced by vegetation taking hold either naturally or after having been deliberately planted. 14 2.1.2.2 Chemical Functions Wetlands trap water and filter out pollutants as they intercept the runoff from uplands before reaching the channels, thus improving its quality. Foremost is their role in removing the nitrogen and phosphorus from the use of ever-increasing quantities of nitrogenous and superphoshate fertilizer (Van der Valk et al., 1979). The water with extreme nutrient content would causes rapid plant and algal growth (eutrophication), and the rapid spread of undesirable aquatic plants that absorb oxygen in lakes, ponds and slow moving waters reduces the ability of water to support the marine life and would also affects the quality of drinking water and recreational activities. The removal of nitrogen and phosphorus by wetland is achieved by a number of means. For phosphorus, there are either reduced by the plants uptake and also being absorbed and settled in the anaerobic sediments. However, the removal amount is limited. In contrast, the nitrogen removal is very effective in wetland through the nitrification-denitrification process. In almost the same way, the toxic from water such as heavy metal can be removed from water by ion exchange and adsorption in the organic and clay sediments, and by plant uptake particularly the bulrush (Schoenoplectus lacustrus), the common reed (Phragmites australis) and the water hyacinth (Eichhornia crassipes), which is an aggressive colonizer of warm still water. Depending on the pollutant and wetland type, the effectiveness and efficiency of these processes varies between 20 and 100 percent. 15 2.1.2.3 Biological Functions Wetland were always known to be the most productive ecosystems in the world, rivaled only by some tropical rainforests and the most intensively cultivated areas of land such as prime con field in the Midwest of the United States (Williams, 1990). Mainly, wetland plants (autotroph) were perennials and nearly all leaf with little or no woody or thickened tissues. Thus, they were constant and efficient converters of solar energy (photosynthesis) to fix carbon and create biomass. Besides, their root systems were specially adapted to take up inorganic nutrients and incorporate them into organic forms. Moreover, constant new supplies of nutrients were provided due to the repeated flooding and/or tidal flux. Not much of the wetland natural production could be eaten directly, except for wild rice and cranberries. However the greatest food value comes from the dead plants forming detritus on which heterotrophic organisms such as larvae, fungi, bacteria and protozoa thrived. Aquatic food web of high-yielding animals and fish would be formed. According to Tiner (1984), wetlands could be regarded as ‘the farmlands of the aquatic environment’ as large volume of food are produced. Even if the relationship between wetlands, net primary productivity and abundant invertebrate life, and consequently fish and animal life, is beyond doubt, the mechanisms of the food chain were still imperfectly understood. However, the facts would always remain that an abundant natural production would be lost to have the wetland drained. Providing habitats for invertebrates and cold-blooded vertebrates, wetlands also figured largely in the cycle of many freshwater and coastal fish that fed on wetland-dependent food, used the wetlands as nursery grounds and often spawn in the aquatic parts of wetlands. According to Turner and Boesch (1988), the greater the extend of wetland, the greater the yield of fish, and the nature and abundance of vegetation would also affected the numbers. 16 2.1.3 Hydrology of a Freshwater Wetland The hydrology of a wetland creates the unique physico-chemical conditions that make such an ecosystem different from both well-drained terrestrial systems and deepwater aquatic systems. Wetlands, as shown in Figure 2.1 (a), are transitional between terrestrial and open-water aquatic ecosystems. In terms of spatial arrangements, they are usually found between uplands and aquatic systems. In addition, they are also transitional in the amount of water they store and process, and in other ecological processes that result from the water regime (Mitsch and Gosselink, 2007). Since wetlands form the aquatic boundary of the habitats for many terrestrial plants and animals and also form the terrestrial edge for many aquatic plants and animal, thus a small change in hydrology could demonstrate significant biotic changes. A modification of the physico-chemical environment would have a direct impact on the biota in the wetland. With slight change in the hydrologic conditions of the wetland, the biota might respond with massive changes in species composition and richness in ecosystem productivity. Figure 2.3 illustrates the effects of hydrology on wetland function and the biotic feedbacks that affect wetland hydrology. 17 Figure 2.3: Conceptual diagram illustrating the effects of hydrology on wetland function and the biotic feedbacks that affect wetland hydrology. Pathway A and B are feedbacks to the hydrology and physicochemistry of the wetland. (Source: Mitsch and Gosselink, 2007). Flooding has many benefits, however due to human development on watersheds, such as draining wetland that associated with water course, often increases economics lossess from floods. It is apparent that the amplitude and frequency of water level fluctuations control the characteristics of wetlands. High water periods create wetlands by destroying any existing terrestrial plants and allowing wetland species to become established. 18 Flooding shows an important impact upon fish ecology. According to LoweMcConnell (1975), the annual cycle of tropical fish is closely tied to the period of inundation. Where much of the land is very flat peneplain, the rivers inundate vast areas. Submerged seasonally and drying out for part of each year, these floodplains are interspersed with creeks, pools and swamps, some of which retain water throughout the year. Although the rain occurs, flood peaks occur well after the rain have started; the delay depends upon the origin of the main floodwater and the time taken to travel downstream. As the rising water floods up channels and creeks, it releases fish imprison within pond and swampy areas. Still higher levels then create an immense sheet of water that is enriched in nutrients from decaying organic matter. Thus leads to an explosive growth of bacteria, algae and zooplankton, which in turn supports a rich fauna of aquatic insects and other invertebrates. Meanwhile, the aquatic vegetation, both rooted and floating, grows rapidly. Many fish then migrate upstream and migrate laterally onto the floodplain to spawn. The eggs laid hatch within a few days, so the yearlings appear when the food is abundant. For nearly all species, the highwater period is the main feeding, growing and fattening season before the water level falls and nutrients are depleted, the fish move back into the main river. Figure 2.4 shows the effects of flooding upon fish using the floodplains of tropical rivers. 19 Figure 2.4: The effects of flooding upon fish using the floodplains of tropical rivers (Lowe-McConnell, 1975) 2.1.4 Biogeochemistry of a Freshwater Wetland Lockaby and Walbridge (1998) describe the biogeochemistry of a freshwater swamp as ‘the most complex and difficult to study with any forest ecosystem type’. The freshwater swamps have soil and water chemistry that varies from the rich sediment of alluvial river swamps to the extremely low mineral and acidic waters of surface water depression red maple swamps and cypress domed (Mitsch and Gosselink, 2000). Furthermore, a wide range of pH, dissolved substances, and nutrients are found in the soils and waters of these swamps. Follows are several facts that should be noted from this wide range of soil and water chemistry: 20 i) Swamps are generally acidic to circumneutral, depending on the accumulation of peat and the degree to which precipitation dominates the hydrology. ii) Nutrient conditions vary from nutrient- and mineral-rich conditions in alluvial river swamps and groundwater discharge swamps. iii) An alluvial river swamp often has a very different water quality from the adjacent river. Swamps in alluvial settings are generally fed by both groundwater discharge and flooding rivers and can have the water chemistry quite different from either source. Mitsch and Gosselink (2000) have also stated that many fresh water swamps are ‘open’ to river flooding and other input of neutral and generally well-mineralized waters. In United States, the Cypress domes and perched-basin swamps are usually in the pH range of 3.0 to 5.0 which is acidic. This is caused by the humic acids produced within the swamp. Colloidal humic substances contribute to both the low pH and the tea-coloured or ‘blackwater’ appearance of the standing water in many forested wetland. 2.2 Lotic Ecosystems Running water bodies, rivers and streams could be also known as lotic ecosystems which are characterized by continuously running water or current flow; also erode the land surface, transport and deposit materials (Spellman, 1996; Spellman & Drinan, 2001). These running water systems are fed from precipitation that does not infiltrate into the ground or evaporate. The life of a stream could be divided in to 4 stages (Spellman, 1996): 21 i) Stream establishment : Starting as an outlet of ponds or lakes, or arising from seepage areas or springs, a stream might be a dryrun or a head water streambed before it is eroded to the level of groundwater. ii) Young stream (Headwater zone): A stream became permanent or youthful as its bed eroded below the groundwater level and thus received spring water and runoff. Typically the upper, ‘young’ reaches of a stream that are incised into V-shaped valleys, with steep slopes and a few, short tributaries. The channel bed material is generally of coarse gravels, boulders and rock outcrops. Water temperature is relatively cool and stable. The upland streams are more shaded by riparian vegetation and there is portionately more material entering the stream as leaves and logs with their narrow width. Shading and the scouring action of course sediments restrict the growth of algae and other plants. Thus most of the food supply for fungi, bacteria, macroinvertebrates and others, which in turn become food for higher microorganisms such as small fish, are from organic matter from outside of the stream. Habitat diversity might be low as for the restricted temperature range and low input or production of nutrients. iii) Mature stream (Middle-order zone): A wider, deeper, and turbid stream with low velocity. Generally, the water is warmer and the bottom is formed of sand, silt, mud or clay. These reaches transport sediment from bank erosion and from upstream supplies, and have highly variable physical characteristic. The coarse substratum, diversity in channel form, diversity of nutrient sources, variable discharge and wider range of temperature favour a diverse fauna since the range of conditions encompass the optimum conditions for a large number of species (Petts and Foster, 1985). iv) Old stream (Lowland zone): They have approached geologic base level. The floodplain might be very broad and flat. During the normal flow periods, the channel is refilled and many shifting bars are developed. Bed materials are 22 composed of fine sediments, discharges are relatively stable, and temperature fluctuations are buffered by the large volume of water. Valleys are very broad, deeply filled with alluvium, and marked with the evidence of frequent channel changes; meanders, oxbow lakes and swamps. Deposition of sediment occurs through this zone to the terminus of river, where the sediment might deposit out on an alluvial plain, delta or an estuary. Increased turbidity and depth in lowland zone streams might restrict the growth of aquatic plants, and the macroinverebrate population tends to be dominated by those which collect fine particles of organic matter received from upstream. Overall, biotic diversity might be low, although fish species diversity might increase with the presence of larger fish, which feed on smaller ones. 2.2.1 Physical Characteristic of a River These running water bodies naturally consist of three (3) zones: riffle, run and pool. i) Riffle Zone : Faster-flowing, well-oxygenated water, with coarse sediments. The water velocity at this zone is great enough to keep the bottom clear of silt and sludge, thus a firm bottom for organisms is created. Specialized organisms that are adapted to live in running water, for instance, trout, are able to live as they have streamlined bodies, which help in respiration and obtaining food (Smith, 1974). Stream organisms that live under rocks in avoiding strong current have flat or streamlined bodies. Others have hooks or suckers with which to cling or attach to a firm substrate to avoid the washing-away effect of the strong current (Allen, 1996) 23 ii) Run Zone : Also known as intermediate zone. The stream part with slow- moving, relatively shallow stream part with moderately low velocities and little or no surface turbulence. iii) Pool Zone : Deeper water region where water velocity decreased and silt and other settling solids provide a soft bottom (more homogeneous sediments), which is unfavourable for sensitive bottom dwellers. The dissolved oxygen (DO) will be depleted with the decomposition of these solids. Natural and human modification of a stream or upland areas could have profound effects on the state of a stream. The most common and ‘ideal’ fluvial system is as shown in Figure 2.5. Life in a stream is not necessarily constrained by a stream’s bed and banks. Some researchers such as Benchala (1984), Fortner and White (1988), have done some study on the sub-surface character of stream. Their work demonstrates that the interstitial zones in streambeds are important in the storage of dissolved gases and nutrients, and that for ecological purposes, the stream boundary might lie deep within the streambed. Triska et al. (1989 a, b) defined this boundary as the interface between the groundwater and channel water. Water might seep into the streambed, travel for a certain distance underground and then re-enter the stream. These recharge, underflow and discharge process are dependent on the proximity of the water table to the channel bed surface, streamflow level, bed permeability and topography. Thus, the patterns of flow movement could affect the distribution of hyporheic organisms, rooted aquatic plants and fish spawning area. 24 Figure 2.5: Zones of an ‘ideal’ fluvial system. (Modified from Schumm (1977) in Gordon et al. (2004)). A method has been developed by Amoros et al. (1987) that was applied at Rhone River, France to develop predictive scenario for the impact of engineering works on channel morphology and ecology. This method took onto consideration fluvial hydrosystem as interactive ecosystems over four dimensions: 1) the upstreamdownstream progression; 2) the interconnections between the main stream, side arms, flood plain and marshes; 3) the vertical interchange between regions above (epigean) and below (hypogean) the channel bed surface and 4) the changes in the river’s dynamics and ecosystem over time. The examples of some of the geomorphic patterns and associated biological functions used as spatial units in the study are as shown in Figure 2.6. 25 Figure 2.6: Associations of geomorphic pattern and their ecological implications. (Redrawn from Amoros et al. (1987) in Gordon et al. (2004)). 2.2.2 Value of a River Natural stream resources provide products in the forms of fish, and other wildlife for harvest and enjoyment, as well as services for instance regulation of hydrologic and nutrient cycles, purification of water (Gordon et al., 2004). Thus, conservation of natural stream is crucial as a highly degrade ecosystem would not be efficient in providing goods and services. This argument also emphasized the now growing contribution of natural stream to human daily life. This approach is being used to bridge the gap between scientific understanding of environmental, economic and social aspects of river resources and perceptions by the members of public about the tradeoffs the usually made concerning river resources. 26 Several ethical perspectives on the environment were presented by Burgman and Lindenmayer (1998) for the search of general principle that may guide the protection and management of biological diversity. Two main categories of values were identified, each with sub-categories: i) Functional Value a) Consumptive use value b) Productive use value c) Service value d) Scientific and educational e) Cultural, spiritual, experiential and existence value f) Aesthetic, recreational and tourist use ii) Intrinsic Value a) Ecocentric ethic b) Biocentric ethic Intrinsic values differ from functional perspectives in that the intrinsic values place importance on species and communities, independent of people, while the later take into consideration the role and needs of people. For the ecocentric ethic, the parameters involved is the biological community as a whole, with criteria for stream values based on naturalness, representativeness, diversity, rarity or special features (Dunn, 2000). Meanwhile the biocentric value argues for the value of all the individual organisms. In its purest sense, ecological potential is based on the ecocentric ethic, while the philosophical stance of practical stream management is highly depended on the wider community’s priority for the protection of the functional values. However, in the event of nowadays resource management policy, stream health assessment programs and stream rehabilitation program would struggle to reach consensus on a definition of ecological potential. 27 2.3 Stream Health According to Karr (1996) and Karr and Chu (1999), ecosystem health is the preferred state of ecosystems that are modified by human activity, while ecological integrity is an unimpaired condition, reflective of natural, pristine, reference or benchmark ecosystem. The natural condition would typically exist as dynamic, often changing in an indeterminate way rather than always in an equilibrium state (Belovsky, 2002). The health of an aquatic ecosystem is degraded when the ecosystem’s assimilative capacity to absorb a stress has been exceeded. A healthy ecosystem is composed of biotic communities and abiotic characteristics, which form a self-regulating and self-sustaining unit (Loeb, 1994). Although natural events would also resulted in ecosystem changes, anthropogenic activities always impose stress on these system. When exposed to stress, the organism resistance to displacement from that ecosystem may be exceeded. Depending upon the magnitude and temporal nature of the stress, the organisms may not be sufficiently resilient to reestablish their pre-stress community structure. However, to define a fixed state of an ideal stream condition to set as a reference point to grade stream health is not possible. Pristine condition of a river could be understood as the original state that exists before intensive and widespread disturbance by human. The term ‘natural’ for a stream could be defined as not affected by humans or civilization but it would probably be too vague to be of any real value of describing the condition of a stream. In defining ecological potential, it would be better to define in terms of what could be achieved under the current situation with respect to factors that are not easily remedied or for which change is considered undesirable such as established landuse systems. Streams also suffer major natural disturbances, and from a narrow management perspective, stream suffering such disturbances could be regarded as being temporarily in less than ideal health. One significant difference between human disturbances and natural disturbances is that human disturbances were frequently undertaken with the intention of altering the stream to a desirable condition that could be maintained, 28 whereas after a natural disturbance the stream might recover to its previous state, or perhaps shift to another condition. As these days, natural and human impact are both superimposed, the nature of the impact might change. The stream health could only be assessed relative to arbitrary benchmarks. The establishment of benchmark would involve the application of value judgments usually associated with the normative concepts that biodiversity should be maximized and that ecological systems should be sustainable. In most scientific formulations of ecosystem health, there would be a premise that natural system is healthier than human altered system (Lackey, 2001). Stream health achievement was driven by societal preferences and the crux of policy challenge is deciding which of the diverse set of societal preferences were to be adopted. 2.3.1 Physico-Chemical Assessment The physico-chemical parameters would react to changes in stream flow, landuse and riparian condition and it is generally used in indicating stream and catchments health. Physical parameters included flow, temperature, conductivity, suspended solids, turbidity and colour. Meanwhile, the chemical parameters included pH, alkalinity, hardness, salinity, biochemical oxygen demand, dissolved oxygen, total organic carbon and also nutrient species such as phosphate and nitrate. In Malaysia, the physico-chemical assessment was conducted according to the Department of Environment (DOE) physico-chemical analysis, Water Quality Index (WQI) and Interim National Water Quality Standard (INWQS). 29 2.3.2 Habitat Assessment Habitat is defined as the in-stream and riparian physical and chemical conditions suitable for habitation by biota, so it is specific to the biota, and might even vary according to the life cycle of a biota (Townsend and Hildrew, 1994). According to Gordon et al. (2004), habitat quality could be expressed as the presence or absence of suitable habitat, the volume or area available of ideal habitat or a rating of the relative quality of the habitat that is present. Generally, spatial and temporal habitat variability and biological diversity in rivers are closely related. As shown in Figure 2.7, assuming water quality and hydrology remains constant over time, the hypothetical relationship between physical habitat quality and biological condition is linear over most of the range. There are four categories of habitat quality, ranging between 0 to 100 % of reference condition; non-supporting (< 59 %), partially supporting (60 % - 74 %), supporting (75 % - 89 %) or comparable (> 90 %). The quality of the biological community are also divided into four classes; severely impaired, moderately impaired, slightly impaired and non-impaired. Figure 2.7: Theoretical relationship between physical habitat quality and biological condition (Plafkin et al., 1989) 30 The target of habitat assessment is to generally measure the instream and riparian conditions that influence the structure and function of aquatic community in a stream. One of the major stressors of aquatic system is the presence of an altered habitat structure. The stream health assessment techniques are designed for a diverse range of problems and environment. The habitat-based approach is primarily based on physical habitat, although many also took into consideration the water chemistry and biota. Some examples of the habitat-based stream health assessment are Rapid Bioassessment Protocol (U.S. EPA), Habitat Evaluation Procedure (HEP), Habitat Suitability Index (HSI) and Hydrogeomorphic Index (HGM). 2.3.3 Bioassessment Bioassessment methods directly measure a biotic characteristic of the health of stream. According to Friedrich et al. (1992) alteration of stream habitat, hydrology or water quality could affect the aquatic organisms, which were as follows: i) changes in species composition of aquatic communities ii) changes in the dominant groups of organisms in a habitat iii) impoverishment of species iv) high mortality of sensitive life stages, e.g. eggs, larvae v) mortality in the whole population vi) changes in behaviour of the organisms vii) changes in physiological metabolism viii) histological changes and morphological deformities 31 Although the benthic macroinvertebrates were the most popular choice as bioindicators, the bioassessment method consists of a wide range of bioindicators. It is impossible to sample all biotic parameters as it would need a huge sum of money time. As an alternative, target species are selected. Species that were easy to catch and identify might be the practical choice of indicator, but a meaningful assessment of stream health could only be obtained if the relationship between the ecosystem and the selected indicator were identified. Hence, in assessing stream health, the most promising target species appeared to be found among benthic algae, macroinvertebrates and fish. Fish are popular indicators as they are known to be sensitive to water quality, had characteristic habitat preferences, relatively easy to sample and identify in the field, and they tend to integrate effects of the lower trophic level; thus fish assemblage structure is reflective of integrated environmental health (Barbour et al., 1999). Furthermore, they have relatively large range and are able to detect subtle environmental changes (Ziglio et al., 2006). Thus, fish are best suited in assessing macrohabitat and regional differences. They are long-lived, thus fish could integrate the effects of long term changes in stream health (Simon and Lyons, 1995). Additionally, fish are highly visible and much valued by wider community, thus fish monitoring usually has strong community approval and interest. 2.4 Freshwater Fish Species in Malaysia Malaysia’s freshwater comprised of highly diverse ecosystem and support extensive fisheries. According to Mongabay (2008), there are 614 freshwater fish species in Malaysia with 47 of them were categorized as threatened (EarthTrends, 2007). The largest family which in terms of the number of genera, species and present almost in every water body was Cyprinidae (Mohsin and Ambak, 1983), followed by other families such as family Channidae. 32 2.4.1 Family Cyprinidae The cyprinids were most commonly known as minnows or carps. It was the largest family of fresh-water fish and was highly important food fish. In land-locked countries in particular, cyprinids were often the major species of fish eaten, although the prevalence of inexpensive frozen fish products made this less important now than it was in earlier times. Nonetheless, in certain places they remained popular for food as well as recreational fishing, and had been deliberately stocked in ponds and lakes for centuries for this reason. Several cyprinids had been introduced to waters outside their natural range to provide food, sport, or biological control for some pest species such as the Common Carp (Cyprinus carpio). In some cases, these had become invasive species that compete with native fishes or disrupt the environment; carp in particular could stir up the riverbed reducing the clarity of the water making it difficult for plants to grow. Morphologically, the Cyprinids usually had thin lips, plicae or papillae absent; mouth sometimes suckerlike. Barbels might present, premaxilla usually borders the upper jaw making the maxilla entirely or almost entirely excluded from the gape, usually had protrusible upper jaw and Dorsal fin with spinelike rays in some. A number of this family was important in research studies, and Malaysian cyprinids had beautiful colours, thus they were valued as aquarium fishes (Mohsin and Ambak, 1983; Nelson, 2006). Some species, such as Terbul (Osteochilus hasselti), Seluang Sumatra (Rasbora sumatrana) and Temperas Mata Merah (Cyclocheilichthys apogon) were very good fish as they were abundant in all types of water; thus it has high economic significance. The spawning habits were different between each species. Some chose under stones, loges and other heavy objects for their nest, with the male guarding the eggs, whilst others would bury their eggs under the gravel and left them ((Mohsin 33 and Ambak, 1983; Nelson, 2006). Figure 2.8 as follows shows some of the species within this family, along with their local names. a) Species : Osteochilus Scientific name: Osteochilus hasselti Local Name : Terbul b) Species : Rasbora Scientific name: Rasbora sumatrana Local Name : Seluang Sumatra b) Species : Cyclocheilichthys Scientific name: Cyclocheilichthys apogon Local Name : Temperas Mata Merah Figure 2.8: Some of the most common Cyprinids species in Malaysian freshwater a )Terbul, b) Seluang Sumatra, c) Temperas Mata Merah 2.4.2 Family Channidae Channidae is a family of freshwater fish, commonly known as snakeheads, that is native to Africa and Asia. There are two extant genera, Channa in Asia, and Parachanna in Africa, consisting of 30-35 species (Wikipedia, 2009). These predatory fishes are distinguished by a long dorsal fin, small head with large head scales on top, large mouth and teeth. They have a physiological need to breathe 34 atmospheric air, which they do with a suprabranchial organ; a primitive form of a labyrinth organ. They are considered valuable food fish. Larger species like Channa striata, Channa maculata, and Parachanna obscura are farmed in aquaculture. Some of the species such as Channa striatus (Snakehead Murrel) and Channa marulius (Bullseye Snakehead) has high nutritive value and its flesh is said to have wound healing effect and recuperative attributes. Snakeheads feed on plankton, aquatic insects, and mollusks when small. When adult, they mostly feed on other fish like carp, or frogs. In rare cases, small mammals such as rats are taken. The size of the snakehead species differs greatly. "Dwarf snakeheads" like Channa gachua grow to 10 inches (25 cm). Most snakeheads grow up to 2 or 3 feet (60–100 cm). Only two species (Channa marulius; Bullseye Snakehead and Channa micropeltes; Giant Snakehead) can reach a length of more than 1 meter and a weight of more than 6 kg. It is illegal to keep snakeheads as pets in all states of the USA and other countries as they have become an invasive species due to irresponsible owners releasing them into the wild when they could/would no longer take care of them. If in an enclosed area they will try anything to escape. If kept in an aquarium they will charge at full force and tend to knock over the aquarium or shatter the glass. Figure 2.9 follows shows some of the most common species within this family along with their local name. 35 a) Species : Channa Scientific name: Channa micropeltes Local Name : Toman b) Species : Channa Scientific name: Channa striatus Local Name : Haruan Figure 2.9: Some of the most common Channa species in Malaysian freshwater a) Toman, and b) Haruan. 2.5 Diversity A fundamental property of any ecosystem or habitat is the number of species it contains. Thus, diversity has long been of keen interest to ecologists and to conservation biologist (Keddy, 2000). Some of the terms used to describe the number of species in a sample is called alpha diversity, species density, or species richness. In contrasts, the number of species in an entire community or larger geographical area is referred to as biodiversity or the species pool of that area. The tem diversity is often used synonymously with all the terms; however, precisely speaking it includes the relative abundance of species. In case all species are equally abundant, then diversity and richness area the same. However, this is rarely observed in nature; there will be a species that dominates the community. 36 Providing only a list of species that exist in a habitat will lead to a misunderstanding; only a few species on the list are abundant whilst the others are often rare. According to Peet (1974), to express these differences in relative abundance of species in a site or sample, data are often presented in a ranked abundance list, which is also called a dominance diversity curve. Naturally, after the number of species is obtained, how environment affects the number of species should be enquired. In answering this question, the number of species in a sample is used as the dependent variable, and the environmental factors leading to the species number is determined. Regarding any such study, the starting point is the species-area relationship. It is well established by now that the number of species in any habitat increases with area and decreases with isolation (Peet, 1974). As any other ecosystem, this applies to wetland; the pattern applies to all major taxa including mammals, herptiles and plants. 2.6 Wetland Management for River Improvement Natural river-floodplain ecosystems exhibit a hydrodynamic gradient from the main channel to inundation-free areas. A wide variety of riverine habitats exist along this gradient, in space and time, created by the dynamic interaction of water sediment and biota, which lead to high biodiversity. Stream and river chemistry and morphology have been altered drastically as a result of wetland loss and visa versa. Rivers, streams, and wetlands work as integrated ecosystems to maintain stability and function. The wetlands, including riparian, fringe, and instream wetlands, function to protect and provide nutrients to neighboring streams and rivers (Mitsch and Gosselink, 2000). Studies have shown that the effects of riparian zone loss are so great, that the morphology of even large rivers can change drastically. 37 Wetland and forest riparian zones provide streams and rivers with organic material, such as leaves, that make up the waterway's greatest resource of nutrients (Mitsch 1993). Flora, macroinvertebrates, and vertebrates rely on the area around them for nutrients and food: the riparian area is a source of energy, like the sun, in the trophic cascade. Without riparian organic matter, these lotic ecosystems have no nutrients to support the diverse life that they host. Wetland loss has been associated with the direct loss of species diversity due to destruction and lowered recruitment of infringing vegetation communities and displacement of fauna. Biodiversity is important in an ecosystem in that it is the multitude of organisms in a system, each having their own role, which drives the ecological processes. The loss of wetlands may end with a loss of flora and fauna, which not only support human interests, but also contribute to the health of other ecosystems, such as streams and rivers (Mitsch and Gosselink 2000). The loss of flora is especially devastating in an ecosystem because primary producers, such as wetland plants, are the basis of any ecosystem. The effects of the loss or lowered recruitment of these plants ripples throughout the trophic ladder: fauna that depend on wetland plants as a source of food or shelter perish or migrate, resulting in the loss of fauna that are predaceous, and so on. CHAPTER III STUDY AREA 3.1 Introduction For this study, three rivers in Johor were chosen. The rivers are Sungai Lukah, sungai Tui, and Sungai Mengkibol. These rivers display different degrees of disturbances and physical conditions especially Sungai Lukah which is connected to wetland area. The location selections are based on the different type of landuse and river type. The location and area description of the rivers are as in Table 3.1 39 Table 3.1: Location and coordinates of study site River Name Location Sg Lukah Sg Tui Predominant Landuse • Freshwater wetland, N 01º 40’06.6” coastal forest Ulu Sedili Kecil E104º09’46.4” upstream • Palm oil plantation N 01º 43’ 43.6” E 104º 09’ 59.9” downstream • Rubber & Palm oil Bukit Kepong, N 02º 19’ 30” to 02º 22’ 20” plantations Muar • Forest reserve E 103º 18’ to 103º 23’ • Village & settlements Sg Kluang Town Mengkibol 3.2 Coordinate N 01º 55’ to 02º 06’ E 103º 33’ to 103º 40’ • Rubber & Palm oil plantations • Residential & commercial areas Sungai Lukah Wetland, Ulu Sedili Kecil The wetlands of Sungai Lukah, which is located between Tanjung Balau and Jason Bay is the last vestige of non-peaty, freshwater swamps in Johor. This river begins from Ladang Hulu Papan and flows southward for approximately 14 km before joining with Sg Sedili Kecil which then flows out into the South China Sea. Another main river that receives water from the project site is Sg Tengah which also flows out into the South China Sea. Figure 3.1 shows the area of Sungai Lukah wetland. The Lukah wetlands represent a rare and unique wetland type in South East Asia; the freshwater swamp forest. A freshwater swamp forest is one of the most endangered wetland types in South East Asia since much of it has been converted to other land uses. Most of the surrounding areas were already drained and turned into oil palm plantations. Figure 3.2 shows the hilltop view of the wetland in the Ulu Lukah area while Figure 3.3 shows the wetland that has been turned into plantation 40 Aquaculture Shrimp Pond Kemajuan Tanah Lok Heng Selatan (FELDA) Sungai Lukah Ulu Lukah Kemajuan Tanah Papan Timur (FELDA) Figure 3.1: The location of Sungai Lukah and the sampling sites (the dark blue lines are the main distinguished rivers) 41 Figure 3.2: The hilltop view of the valley and Sungai Lukah wetland. Figure 3.3: Wetland area that has been turned into palm oil plantation. Furthermore, the area is also logged where most of the access dirt/laterite roads were built for logging purposes. These roads also changed the hydrology of the wetlands as their presence blocked the surface and groundwater movements of the water. The extent of freshwater swamp forest in and around Sedili Kecil has 42 been reduced due to agriculture and village settlements. What remain in this area are the riverine habitats and some small pockets of freshwater swamp forests. The riverine vegetation is in a good condition with distinct gradation vegetation zones in Sungai Sedili Kecil (i.e. mangrove belt ‘nypa’ belt ‘Barringtonia conoidea’ belt ‘pandanus’ belt to freshwater tidal belt). This gradation of vegetation types along the Sungai Lukah is extremely rare now in South East Asia. Therefore the project area must be conserved and protected to reduce further losses of this unique type of wetland habitat. Both Sungai Sedili Besar and Sedili Kecil Rivers which are also associated in this freshwater wetland, qualify to be protected under the Ramsar Convention since it fulfils 62.5% of the criteria to be listed as a Wetlands of International Importance. Figure 3.4 below is the view of Sungai Lukah sampling site and Figure 3.5 is the view of the upstream area. Figure 3.4: Sampling site at Sungai Lukah Wetland. The Asean Regional Centre for Biodiversity Conservation has stated that the area has humid tropical climate with an annual rainfall of 3,000-3,500 mm. The wet season during the northeast monsoon lasts from October to January, with December as the wettest month (over 500 mm). Whilst, the driest month is April (just over 100 43 mm), during the southwest monsoon dry period. According to the Wetlands International Malaysia, the floral and general biodiversity of the Sedili swamps is high. 49 Bird species, 7 species of mammals, 21 species of fish, 4 species of reptiles and 5 species of amphibians were recorded at the project sites. There are 16 dominant species of freshwater swamp forest trees at the site, which makes it very interesting from the point of the gradation from true mangroves into different freshwater vegetation belts. Figure 3.5: The upstream area of Sungai Lukah (Ulu Lukah) It is probable that such a distinct gradation of riverine vegetation in freshwater ecosystems exists nowhere else in Malaysia. The Sedili swamps are very important areas for bird watching, recreational fishing and wetland interpretation. Moreover, the rivers and their associated floodplains are probably very important as flood water storage areas, especially the Sedili Kecil basin. Any drainage of the swamp areas and consequent loss of this capacity may result in increased danger of flooding in downstream areas. The Sedili wetlands are an important refuge for wild life and have high conservation and biodiversity values. 44 3.3 Sungai Tui, Bukit Kepong Sungai Tui is located in the district of Muar, about 10 km from Bukit Kepong town. Bukit Kepong is situated near the towns of Chaah, Lenga, and Labis. Sungai Tui is one of the tributaries of Sungai Muar, where the main channel of the river is approximately 10 km in length (Nurul Huda, 2008). The river mouth is located about 1 km away from the old Bukit Kepong Police Station at a coordinate of 2º21’20.22” N and 102º49’50.16” E, 10 km north from Lenga Town and 18 km south of Segamat. Figure 3.6 illustrate the location of Sungai Tui from the map of Peninsular Malaysia. Figure 3.6: The location of Sg Tui and its sampling site. The area is generally flat lying. Sungai Tui, with the highest ground level is 249m while the lowest is 30m from the mean sea level. Bukit Kepong, that includes Sungai Tui, is prone to minor flood that the area had experienced quite a number of times, with exception of the heavy flood episode in December 2006 to January 2007. 45 Consequently, some changes in the physics especially the hydrographical condition occur due to the events. For that reason, the Department of Irrigation and Drainage (DID) had deepened and widened the river channels at the downstream areas (Hamzah and Mahamud, 2007). Figure 3.7 shows Sungai Muar that flows near the old Bukit Kepong police station and Figure 3.8 is the old police station. Figure 3.7: Sungai Muar near the old Bukit Kepong police station Pejabat Daerah Muar stated that the statistics for the population of Bukit Kepong in 2007 is 9931 while the overall population for the Muar district is estimated as 318 620 people (Majlis Daerah Muar). Mostly the Bukit Kepong residents are hawkers and shop owners, whilst the villagers involve in agricultural activities such as in palm oil, rubber and vegetable plots. Besides, some fish and shrimp ponds are also found within the catchments. However the major landuses in Sungai Tui river basin are palm oil plantation, rubber estate, vegetable plots and fruit farming, as well as village settlement. The study was conducted at the upstream reach of Sungai Tui, where the major landuse is palm oil plantations (Figure 3.9) and secondary forest. For a 100m radius from the study site, no village settlement was present. Dissimilar from the map, it was observed that the smaller streams are dry; thus the study site is categorized as a second-order river. 46 Figure 3.8: The old Bukit Kepong Police Station. Figure 3.9: Palm oil plantation is the dominant landuse around the study area. 47 3.4 Sungai Mengkibol, Kluang Sungai Mengkibol is a small river that flows northward through the town of Kluang. It receives flows from Sungai Melantai before joining Sungai Semberong. The upstream of the river is located in palm oil estate near to Kg Sayong with an approximate length of 20 km. Kluang town lies about 110km north of Johor Bahru, west of Mersing and south of Segamat. The studied reach is located in the middle section of the river, near the Kluang Bus Station, as shown in Figure 3.8 follows. Figure 3.10: The location of the sampling reach for Sungai Mengkibol 48 Generally, Kluang lies in an area of undulating hills. The highest point in the area is Gunung Lambak (510m) that lies about 6km southeast from the centre of town. Kluang town is landlocked and has no seafront. According to the Majlis Perbandaran Kluang (2004), Kluang town has a population of over 140 000 residents, where the area is largely occupied with residential areas (1437 ha), commercial building (100 ha), and facilities, whilst in overall Kluang district is mainly covered with agricultural lands with 11 500 ha in total (Majlis Perbandaran Kluang, 2004; Wikipedia, 2009). The agricultural activities are mainly of palm oil plantations, rubber plantation as well as fruit plantation. From observation, about two-third of Kluang town are impervious areas, which includes road pavement, building and storm drainage. Figure 3.11 shows Sungai Mengkibol that runs through the town. Figure 3.11: Sungai Mengkibol runs through the commercial areas in Kluang town. 49 The river acts as the main stormwater drainage and had faced many storm events including the worst one on December 2006 to January 2007. More than 400 mm of rain was recorded which was far exceeding the long-term mean monthly rainfall for Johor (Md Jafri, 2007). As a mitigating measure, 6km stretch of the river; starting from Taman Muhibah area until the downstream; has undergone major flood mitigation works, such as dredging, channel widening, bank stabilization and riparian vegetation that is as shown in Figure 3.12. The enhancement of the amenity and recreational sites has been recently developed at some stretch of the riverbank, especially at 700m stretch along Jalan Cantik, namely Sungai Mengkibol Riverine Park (Figure 3.13). Figure 3.12: The riverbanks that are stabilized with concrete wall. 50 Figure 3.13: Sungai Mengkibol Riverine Park The study was conducted at the middle reach of Sungai Mengkibol, starting at the bus terminal to the bridge before the wet market. Besides receiving flows from town drainages, the river also receives effluents from waste water treatment plant (Figure 3.14), food stall, wet market and domestic discharge. The reach is a secondorder river. Figure 3.14: The waste water treatment plant that discharge the effluent into Sungai Mengkibol CHAPTER IV METHODOLOGY 4.1 Introduction The main works involved in this study are the assessment of the biological and physical features at each of the three rivers. The river status assessment are based on the fish assemblages and composition, types of existing habitat and its distribution in the river, other physical characteristics of the surrounding area of the river such as land uses and canopy cover that might influence the fish assemblages and also the status of the water quality of the river. The physical characteristics of each river were sketched in obtaining a general condition of the area. In this chapter, the methods and procedure of the habitat assessment, and also water quality analysis in order to achieve the objectives of this study would be discussed. The operational framework for this study is as illustrated in Figure 4.1: 52 Research overview Site Selection Preliminary Survey Objective of Study Literature Review Scope of Study Fieldworks Biosurvey and Fish Collection River Habitat Survey Water Quality Result Analysis and Habitat Assessment Report Figure 4.1: Flowchart of research study 53 4.2 Fieldwork For the field work, there are three different components; fish species composition, river habitat survey the water quality assessment. Both physical characteristics and water quality parameters are relevant to the characterization of river habitat. There were 4 sampling works carried out for this study. The frequency of the sampling works for each study area is twice for Sungai Lukah; 19th of November 2008 and 29th May 2009, and only one sampling work for both Sungai Tui and Sungai Mengkibol; on 15th of February 2009 and 20th of March 2009 respectively. Previous studies for all three rivers are available in supporting the data obtained from sampling works. 4.2.1 Assessment of Fish Composition For the fish species composition, the data are obtained from sampling works and previous study. Both of the data groups; previous study and sampling work, are labeled as ‘Event’. For Sungai Tui and Sungai Mengkibol, there were three events; the first and the second events are obtained from previous study while the last event is the sampling work. However, the data for Sungai Lukah wetland area study was summed up as the number of fishes caught during sampling work is small. The captured fishes are sorted into each family type before the total weight and range of length is recorded. 54 4.2.1.1 Fish Species Composition Sampling for fish sample data is conducted by using nets and electro-fishing. The sampling works were carried out at ten equally spaced spot-checks or segments, along each of the channel within approximately same time spaces (Environment Agency, 2003). The electro-fishing was applied for fish collection in each segment while gill net was located at the downstream of the study reach. Electro-fishing was used and recommended method for fish surveyas it is more applicable and more efficient in a variety of habitat. It is conducted in a slow zigzag pattern, against the water flow (USEPA, 1989; Angermeier and Davideanu, 2004; Gerhad et al., 2004). All the stunned fish would be captured, before being sorted, measured and weighed. Each caught individual was identified through its family species, with reference from previous studies and catalogues from the Department of Fisheries. For the species that was unable to be identified at side, its photograph was taken for further identification. The fish species and abundance data was recorded according to batch sequence of spot-checks. 4.2.1.2 Total Length The total length of each individual was measured by using a measuring board made of plastic and a fixed graduated meter scale. At the zero end of the scale a suitable stop is placed at 90º angle. The anterior end of the fish is placed against the stop, as shown in Figure 4.2. 55 Figure 4.2: Measurement of total length by using measuring board Mohsin and Ambak (1983) had stated that total length is defined as the greatest length of a fish from the anterior most projection of the head or upper lip the longest caudal ray, with lobes squeeze together. However, in some fishes like Baung (Mystus nemurus) the upper lobe of the caudal fin which is longer than the lower lobe is used for measurement. As in the case of prawns, the measured length is from the tip of its longest whiskers to the caudal fin. The length is recorded in centimeter (cm). Figure 4.3: Tilapia, showing certain morphological characters and their measurement (Mohsin and Ambak, 1983) 56 4.2.1.3 Total Weight The total weight of each fish species was measured by using weight scale as shown in Figure 4.4. The total number and weight of each species was determined by the overall abundance for the whole river reach. The fish weight, along with its size distribution indicates the fish life stages. Figure 4.4: Weight measurement using weighing scale 4.2.2 Characterization of River Habitats As for the river habitat survey, river mapping were carried out at the same segment as the fish survey to determine the physical feature and structures of the rivers. This field survey element consists of the recognition and identification of physical components that relates to the channel form and habitat. The features of a channel form include the river morphology and landuse or banktop characteristics. Generally, the 57 habitat types are divided into two categories which are instream habitat and channel units. Instream habitat basically is the physical features or structures within the river channel and at the banksides, while channel units are flow-dependant habitats such as riffle runs and pools. In this study, the survey form of River Habitat Survey (RHS) established by UK Environment Agency is implemented as it represents the overall survey and assessment of the physical features of a river (Environment Agency, 2003). In recording the data, the rivers are being sectioned into equal length. The segments applied for biosurvey were used for the river habitat data collection. Figure 4.5 shows the cross section of a channel that defined where spot-check recording and measured channel dimension and the example is shown in Figure 4.6. Figure 4.5: Cross-section of channel showing definitions used to define where spotcheck recording and channel dimensions measured 58 Submerged woody debris Unvegetated bank, 45º Sand accumulation Figure 4.6: Examples of the location and type of physical features of a river channel Mapping and photographs of the segments along the studied reaches are essential in aiding the estimation of the distribution of the physical features. Besides, maps of a reach could provide useful information of stream morphology and extend of various habitat types. For this study, freehand sketches of the physical surroundings were carried out at the site including the location of channel units, woody debris, vegetation types and banks characteristics before a more proper drawing was produced by using computer software. The distribution and composition of habitat features were derived and estimated from both survey forms and river mappings. The vegetation types and other structural features within 5m of the banks were assessed by estimating the percentage of trees (woody vegetation > 3m), shrubs (woody vegetation < 3m), herbaceous (and grass) vegetation, bare soil which includes unvegetated bars, artificial structures and debris in 59 the river channel at the segments. However the composition of channel units were estimated based on the cumulative number of their distribution along the whole surveyed reach. As for the Sungai Lukah area, the RHS form is only applicable at certain part of the side as the area especially in the upstream area does not show any river characteristics. One of the main parameter in the habitat survey is the average river velocity. For this study, in the preliminary survey it was observed that the predominant flow type for all rivers are smooth, with occasional rippled except for the wetland area; the water is stagnant. The water flow velocity measurement is necessary as not only to obtain the hydrological loading of the river but also to evaluate the importance of streamflow to the distribution of fish and habitat features. Velocity measurement was conducted by using floatation method, following the DID Hydrological Procedure (HP) No.15. the measurements of surface velocity were conducted at several sections (straight flows are preferred) of the river, where the cross-sections were divided into three subsections. Floats were introduced at the midpoint of each section. Therefore the surface velocity (Vsurf) is calculated as: Vsurf Where L = measured reach length, m t = travel time, s = L/t (4.1) 60 4.3 Water Quality Assessment Water quality assessments for the rivers were carried out in order to obtain the general overview and comparisons of the river conditions, that might affected the fish assemblages of the rivers. In water quality analysis of this study, for each rivers, three sampling stations are selected; upstream, middlestream, and downstream. Except for Sungai Lukah where the upstream and middle stream sampling station is taken in the wetland area which is the catchments area of Sungai Lukah. The Water Quality Index (WQI) and Interim National Water Quality Standard (INWQS) as shown in Table 4.2, are used in the analysis of water quality. INWQS is also used in the analysis as the six parameters listed in WQI (DO, BOD, COD, AN, TSS, pH) that is as shown in Table 4.1, are not adequate in determining the water quality (e.g. phosphorus and iron ferrous) of the three rivers. The other INWQS parameters used in this study are colour and turbidity. Table 4.1: DOE Water Quality Index classification Class WQI Value Classification of Water Quality I > 92.7 Very Good II 76.5 – 92.7 Good II 51.9 – 76.5 Average IV 31.0 – 51.9 V < 31.0 (Source: DOE 2006) Polluted Very Polluted Details Natural Condition Water Supply – no treatment required Aquaculture – support sensitive river species Water Supply – basic treatment required Aquaculture – supports most river species Recreation – for recreational purpose Water Supply – extensive treatment required Aquaculture – supports hardened river species Source of drinking for animals Irrigation only None of the above 61 Table 4.2: Interim National Water Quality Standard classification. PARAMETERS CLASSES UNIT I IIA IIB III IV V DO mg/L 7 5-7 5-7 3-5 <3 <1 BOD mg/L 1 3 3 6 12 >12 COD mg/L 10 25 25 50 100 >100 6.5-8.5 6-9 6-9 5-9 5-9 - pH AN mg/L 0.1 0.3 0.3 0.9 2.7 ›2.7 TSS mg/L 25 50 50 150 300 300 Turbidity NTU 5 50 50 - - - Colour TCU 15 150 150 - - - Note: Class Uses I Conservation of natural environment Water Supply 1 – practically no treatment needed Fishery 1 – very sensitive aquatic species IIA Water Supply II – conventional treatment needed Fishery II – sensitive aquatic species IIB Recreational use with body contact III Water Supply III – extensive treatment required Fishery III – common, of economic value, and tolerant species livestock drinking IV Irrigation (Source: DOE 2006) 62 4.4 Diversity Index The Shannon diversity index (H) which is also known as Shannon-Weiner Index, is an index that is commonly used to characterize species diversity in a community. Shannon's index accounts for both abundance and evenness of the species present. The proportion of species i relative to the total number of species (pi) is calculated, and then multiplied by the natural logarithm of this proportion (lnpi). The resulting product is summed across species, and multiplied by -1: (4.2) Shannon's equitability (EH) can be calculated by dividing H by Hmax (here Hmax = lnS). Equitability assumes a value between 0 and 1 with 1 being complete evenness. (4.3) CHAPTER V RESULTS AND DISCUSSIONS 5.1 Fish Species Composition Based on the previous and fieldwork data sample, the fish assemblage structure and the abundance of individual fish species were examined. A total of 16 species were recorded at Sungai Lukah wetland, 22 species were discovered at Sungai Tui, whilst 13 species were present at Sungai Mengkibol. All the species recorded in the three rivers were determined at site 5.1.1 Fish Assemblages in Sungai Lukah The sampling works for Sungai Lukah were conducted in end of 2008 and in May 2009. There were a total of 16 species belonging to 7 families overall as shown in 64 Table 5.1. Among all the samples caught were dominated by the Cyprinids. Among the cyprinids collected in this study, the Temperas (Cyclocheilichthys apogon), Terbul (Osteochilus hasselti) and Seluang (Rasbora) were the most common species caught. Temperas Mata Merah was the most abundant in the swampy areas of Sg Lukah (downstream and upstream). Table 5.1: Fish species and local name caught at Sungai Lukah. Family Cyprinidae Osphronemidae Nandidae Channidae Clariidae Aplocheilidae Hemiramphidae Species Cyclocheilichthys apogon Osteochilus hasselti Rasbora gracilis Rasbora elegans Puntius lateristriga Puntius binotatus Puntius tetrazona Trichogaster trichopterus Luciocephalus pulcher Pristolepis fasciatus Channa striatus Channa micropeltes Channa lucius Clarias macrocephalus Aplocheilus panchax Hemirhamphodon pogonognathus Local Name Temperas mata merah Terbul Seluang bada Seluang titik Baguh Tebal Sisek Tempurong Sepat Ronggeng Tembok Tebing Patong Haruan Toman Bujuk Keli Bunga Mata lalat Julong The first event data were obtained through a previous study in early 2008. During this sampling work, the Temperas Mata Merah is the most abundant as illustrated in Figure 5.1. A total of 102 specimens of Temperas Mata Merah were caught in the study. The Temperas Mata Merah is known to inhabit small streams, reservoirs, lakes, canals, ditches, and generally areas with slow moving or standing water. It could be typically found around surfaces, such as plant, leaves, branches and tree roots where it browsed for small plankton and crustaceans. 65 The other species of interest are the Bujuk, Haruan and the Sepat Ronggeng. The Bujuk and Haruan were caught in relatively large numbers the upstream area which is a small swamp area within the site. Bujuk is known to inhabit slow moving streams and rivers, as well as lakes, ponds and swamps. It is also a common species in forest streams, and is often found in areas with plenty of aquatic vegetation, as well as submerged woody plants. Haruan is typically found in shallow, open water and was capable of lying buried in mud for a lengthy period. Just like Bujuk, Sepat Ronggeng normally inhabit lowland wetlands and could be found in marshes, swamp and canals, and in water bodies with a lot of aquatic vegetation. It feeds mainly on zooplankton, crustaceans and insect larvae. During Events II and III which were conducted in November 2008 and May 2009 respectively, the numbers of species being captured were reduced greatly as shown in Table 5.2. Compared to the first event, the time duration for the sampling work was reduced from 3 days to just a few hours. As a result, most of the fish recorded in Event II and Event III were from observation data only, resulting in lack of size ranges and weight data. Furthermore, the presence of wetland vegetation and large woody debris and muddy bed material might have provided a good environment for the fishes to hide and avoiding them from being captured. 66 Figure 5.1: The total of all events for fish families obtained in Sungai Lukah. Table 5.2: Relative abundance of each species caught in Sungai Lukah Family Cyprinidae Osphronemidae Nandidae Channidae Clariidae Aplocheilidae Hemiramphidae Species Cyclocheilichthys apogon Osteochilus hasselti Rasbora gracilis Rasbora elegans Puntius lateristriga Puntius binotatus Puntius tetrazona Trichogaster trichopterus Luciocephalus pulcher Pristolepis fasciatus Channa striatus Channa micropeltes Channa lucius Clarias macrocephalus Aplocheilus panchax Hemirhamphodon pogonognathus Local Temperas mata merah Terbul Seluang bada Seluang titik Baguh Tebal Sisek Tempurong Sepat Ronggeng Tembok Tebing Patong Haruan Toman Bujuk Keli Bunga Mata lalat Julong No of Ind 121 17 13 6 3 10 6 17 1 18 5 1 11 10 3 1 67 5.1.2 Fish Assemblages in Sungai Tui From the three assessments conducted at Sungai Tui (first and second event were from previous study, third event was done in February 2009), Cyprinidae was the dominant family recorded. Cyprinids occurred for all three sampling intervals and were always in abundance as shown in Table 5.3. Figures 5.2, 5.3 and 5.4 illustrate the highest percentage captured was 86% and the lowest was 75 % of total specimen obtained. The most occurrence among the Cyprinids itself are Terbul, Kawan, and Seluang Sumatera. Other than that, Lalang, Rong and Sebarau were also found frequently. However, the number of individuals obtained was smaller. Following the Cyprinidae was the Palaemonidae with the highest occurrence of 20% of the total specimen; mainly the specimen obtained was Udang Galah which is more to Udang Gantung. Another species of interest was Haruan from the family of Channidae. Even though the number of individuals captured each sampling work were rather insignificant, however the constant occurrence might indicate that Haruan is one of the main species inhabiting Sungai Tui. Haruan has been a species that is hard to be captured. In addition, there were also some species that seldom occurred i.e. Ketutu, Sepat Padi and Baung Akar Sengat. The abundance of these species in Sungai Tui could not be verified as the small occurrence might be due to sampling method and time was unsuitable for these species. For example, the Baung Akar Sengat is known to be nocturnal. Thus, if sampling is conducted during night time, the Baung Akar Sengat occurrence might increase. 68 Table 5.3: Fish species composition caught in Sungai Tui. Family Species Local Name Cyprinidae Osteochilus hasselti Osteochilus vittatus Chela anommalura Labiobarbus cuvieri Luciosoma trinema Crossocheilus oblongus Hampala macrolepidota Cyclocheilichthys heteronema Cyclocheilichthys apogon Rasbora sumatrana Rasbora elegans Pristoplepis fasciatus Mystus nemurus Mystus negriceps Acanthopsis choirorhyhchos Oxyeleotris marmorata Terbul Rong Lalang Kawan Nyenyuar Selimang siam Sebarau Nandidae Bagridae Cobitidae Eleotridae Mastacembelidae Channidae Palaemonidae Siluridae Osphronemidae Temperas Event I √ √ √ √ √ √ √ Event Event II III √ √ √ √ √ √ √ √ − − − − √ √ √ √ − √ − − √ √ √ √ √ √ √ − √ − √ − √ − − Lali √ √ − Ketutu √ − − Mastacembelus armatus Tilan √ √ − Channa striatus Macrobrachium resenbergii Macrobrachium sp Krytopteris bicirrhis Trichogaster trichopterus Total Species Overall Total Species Haruan √ √ √ Udang galah √ √ √ Udang gantung Lais √ − √ √ − √ Sepat padi − √ − 19 15 22 10 Temperas mata merah Seluang sumatra Seluang dua titik Patung Baung akar Baung akar sengat 69 Figure 5.2: The families obtained during Event I at Sungai Tui. Figure 5.3: The families obtained during Event II at Sungai Tui. 70 Figure 5.4: The family distribution obtained during Event III at Sungai Tui. Based on data recorded as in Table 5.2, a total of 217 individuals with total weight of 7054g were caught during the first sampling work, 261 individuals with total weight of 4428.27g for Event II and 253 individuals with 6122 g total weight. From the data shown, it could be observed that Cyprinids such as the Terbul and Kawan were the most abundant in Sungai Tui population. By referring to Angermeier and Karr (1983), the size of the fish could be classified as small (< 4cm of total length) and large (> 10cm of total length). One major point that could be highlighted from the captured species is that Sungai Tui is a rich and well diversified river. The species caught ranging from yearlings to the adult, and were captured in abundant. As shown in Tables 5.4 and 5.5, the sizes of the captured samples especially the Cyprinids (Terbul, Kawan and etc.) were mainly nearing the maximum known sizes of the species. There were also a large amount of yearlings caught along the adult fish. Some of the species captured were all 71 recorded to be nearly equal in size and weight such as the Haruan. The Haruan caught in all three events were only in a small amount, however the captured ones were usually the adults and contributes a big portion to the total weight of the captured samples. Some species like, Nyenyuar, Selimang Siam, Temperas Mata Merah, Baung Akar Sengat, Ketutu and Sepat Padi were rarely captured with only capture in one event each. Furthermore, the occurrences of captured ones were low with only not more than 10 individuals in small to medium sizes range for each species. Table 5.4: Relative abundance and total weight of each species caught at Sungai Tui Local Names Terbul Rong Lalang Kawan Nyenyuar Selimang Siam Sebarau Temperas Temperas Mata Merah Seluang Sumatra Seluang Dua Titik Patung Baung Akar Baung Akar Sengat Lali Ketutu Tilan Haruan Udang Galah Udang Gantung Lais Sepat Padi Total Event I No of Weight Ind (g) 68 3131 16 243 12 195 42 877 1 35 3 29 4 161 7 97 Sungai Tui Event II No of Weight Ind (g) 48 1540 2 1 2 12.5 63 514.5 − − − − 1 40 17 120 Event III No of Weight Ind (g) 94 2940 9 115 2 310 43 637 − − − − 1 30 − − 5 145 − − − − 1 16 11 3 19 110 350 81 44 19 − 2 116.3 200 − 50 70 − 2 − 250 − 40 − 6 118 − − − − 4 1 2 3 5 7 − − 217 50 64 81 971 290 7 − − 7054 2 − 1 6 27 24 2 1 261 30 − 6 1230 334.5 57.47 170 6 4428.27 − − − 4 23 − 5 − 253 − − − 1370 170 − 260 − 6122 72 Table 5.5: Size range of specimens caught at Sungai Tui Local Name Terbul Rong Lalang Kawan Nyenyuar Selimang Siam Sebarau Temperas Temperas Mata Merah Seluang Sumatra Seluang Dua Titik Patung Baung Akar Baung Akar Sengat Lali Ketutu Tilan Haruan Udang Galah Udang Gantung Lais Sepat Padi Known Maximum Size (cm) 30 30 22 25 26.5 15 70 25.5 25.5 13 0 20 65 15 0 60 45 100 0 0 15 0 Size Range (cm) Event I Event II Event III 8-22.3 7.1-18 7.9 - 20.3 7-15.8 5.1-7.4 6.1 - 17 9.4-18.2 6.7-10.4 7.4 - 13.2 7.5-18.5 4-16.1 7.9 - 14.7 18.5-19.7 − − 8.8-10.7 − − 14.4-17.4 15.5 14 7.7-14.3 5.6-14.7 − 11.2-17.7 − − 14 − 5.3 - 11.7 7.5-12.5 4.5-16.0 7.2-15.0 4.5-13.5 8.4 - 10.9 8.8-19.2 26.0-28.0 − 10.4-16.6 11.8-13.9 − 13.6-17.6 − − 17.5 17 − 20.0-22.5 22.5-40 − 30-41.2 5.0-41.0 31.8 - 35.6 10.8-25 4.25-11.5 4.3 - 50.8 6.0-6.5 13.0-13.5 − − 13.0-13.5 28.5 - 41 − 9 − From the data presented in Tables 5.4 and 5.5, it could be concluded that Cyprinides was the most abundant family that dominated the Sungai Tui population. The Terbul, Kawan and Seluang Sumatera were the main species of Cyprinids that present during each sampling work with the biggest percentage of the total sample recorded. 73 5.1.3 Fish Assemblages in Sungai Mengkibol Similar to Sungai Tui, the fish assessment at Sungai Mengkibol was conducted for three different events; data for Event I and II were taken from previous study, meanwhile, Event III were conducted in March 2009. As shown in Table 5.6, a total of 13 species from 8 families were recorded during the three events including a species of crustaceans. The types of fish discovered at this river were mainly tolerant fish and half of them were non-native species. In Event I, a total of 10 species from all 8 families discovered at Sungai Mengkibol were recorded. The dominant species obtained was from Poeciliidae family with 66% of the total caught sample. This is followed by Cichlidae (10%) and both Loricariidae and Cyprinidae with 6% each and the rest of the sample are only a small portion for the other families. The Molly and Mosquito Fish from Poecilidae family were caught the most during the first sampling work. The percentage of families caught during sampling are as illustrated in Figure 5.6. During the second sampling work, only 4 families involving 5 species were being recorded as shown in Table 5.6. As illustrated in Figure 5.6, the Loricariidae contributes to the largest percentage with 70% over the whole sample caught, followed by Cyprinidae (17%), Claridae (9%) and lastly, Channidae (4%). The dominant species recorded during the sampling work was the Armoured Catfish (Hypostomus plecostomus). For the last event, only 4 families with 5 species were present during the last sampling work. Half of the samples obtained during the sampling work were from Cichlidae family. This is followed by Poeciliidae (36%), Cyprinidae (9%) and lastly the Loricariidae (5%). During this sampling work, the most species caught were Gapi and Mosquito Fish. 74 Table 5.6: Fish species composition caught in Event I, II and III at Sungai Mengkibol Family Species Local/common Name Cyprinidae Osteochilus hasselti Rasbora sumatrana Labiobarbus cuvieri Channidae Channa striatus Claridae Clarias batrychus Clarias batrychus Oreochromis Cichlidae mossambica Poeciliidae Poecilia reticulata Poecilia phenops Gambusia holbrooki Loricariidae Hypostomus plecostomus Parastacidae Cherax quadricairnatus Ttrichogaster Osphronemidae trichopterus Terbul Seluang Sumatra Kawan Haruan Keli Keli Kayu Event Event Event I II III √ √ − − − √ √ √ − √ √ − √ − − − √ − Tilapia Hitam √ − √ Gapi Molly Mosquito Fish Armoured Catfish Red claw lobster − √ √ √ √ − − − √ − √ − √ √ − Sepat Padi √ − − Total Species Overall Total Species 10 5 13 5 Fish Families Distribution in Event I of Sungai Mengkibol 8% 8% 10% 66% Cyprinidae Poeciliidae Channidae Loricariidae Claridae Parastacidae Cichlidae Osphronemidae Figure 5.5: Families obtained for Event I in Sungai Mengkibol 75 Fish Families Distribution in Event II of Sungai Mengkibol 17% 4% 9% 70% Cyprinidae Channidae Claridae Loricariidae Figure 5.6: Families obtained for Event II in Sungai Mengkibol Fish Families Distribution in Event III of Sungai Mengkibol 5% 9% 36% 50% Cyprinidae Cichlidae Poeciliidae Loricariidae Figure 5.7: Families obtained for Event III in Sungai Mengkibol 76 Based from the data as in Table 5.7 and Table 5.8, the main caught species was the Armoured Catfish that occurred in all three sampling works and the Tilapia Hitam that occurred for the first and last sampling works being conducted. Sungai Mengkibol, being an urban river that received mainly surface runoffs from the activities in the Kluang Town, it could only support hard species such as the Armoured Catfish and Tilapia Hitam in it. Haruan, Keli, Tilapia Hitam and Armoured Catfish were all recorded to be in the adult stages. Introduced species such as the Mosquito Fish and Molly were also captured in abundant for the first sampling work. Even though Molly and Mosquito Fish were the most abundant, they only contribute a small portion on the total weight. In first event, with 25 individuals, Molly only contributed 0.2% of total weight, while Mosquito Fish only contributed less than 0.045% of the overall weight. This might be caused by the fishes were the small type fishes and the maximum known size of the fishes is only 3.5 cm. In Event III the Mosquito Fish reached the maximum size of 4.3cm. Table 5.7: Relative abundance and weight of each species caught in Sungai Mengkibol Local/Common Name Terbul Seluang Sumatra Kawan Haruan Keli Keli Kayu Tilapia Hitam Guppy Mosquito Fish Armoured Catfish Sepat Padi Red Claw Lobster Molly Total Event I No of Weight Ind (g) 4 45 − − 1 13 1 310 1 40 − − 6 1800 − − 16 <1 5 235 1 5 1 15 25 6 58 2469 Event II No of Weight Ind (g) 2 60 − − 2 60 − − − − 2 540 − − − − − − 16 580 − − − − − − 22 1240 Event III No of Weight Ind (g) − − 2 0.8 − − − − − − − − 11 50 5 10 3 <1 1 10 − − − − − − 22 70.8 77 Table 5.8: Size range of specimens caught at Sungai Mengkibol Local/Common Name Terbul Seluang Sumatra Kawan Haruan Keli Keli Kayu Tilapia Hitam Gapi Mosquito Fish Ikan Bandaraya Sepat Padi Red Claw Lobster Molly 5.2 Known Maximum Size (cm) Event I Event II Event III 30 13 25 100 − − − − 3.5 50 15 − − 6.6 - 13.0 − 13.1 38.5 26 − 16-19.5 − − − 8.3 14.6 2.1-5.2 5.2 - 5.8 − 5.8 - 5.9 − − 9.4 - 14.5 − − − 2.5 - 10.8 − − − − 6.1 - 17 − − − − 4.8 - 10.2 7.9 - 14.7 1.3 - 4.3 13 − − − Size Range (cm) River Habitat Survey The river habitat survey was done in order to determine the physical feature and instream habitat and riparian structures of the rivers. The river habitat survey was conducted at the respective reach of Sungai Tui on 15 February 2009, Sungai Mengkibol on 20 March 2009 and on 29 May 2009 for Sungai Lukah. This section would summarizes the results of analysis derived from the application of river habitat survey form (Appendix) established by UK Environment Agency. The Tables 5.9 and 5.10 show the values of channel form and characterization of instream habitat in the studied reaches. The bankside landuse of Sungai Tui was mainly of herbaceous vegetation and grass (61.5%), while Sungai Mengkibol was covered with grass along with the 25% of man made structure mainly existed as an anti erosion 78 measure such as retaining wall. The mean depth of the water level of Sungai Tui was recorded as 0.74m depth and as for Sungai Mengkibol the water depth was recorded at an average of 0.44 m depth. Due to recent excavation activity to stabilize the bank of the river, deeper parts of the river (pool) were increased. As for the case of Sungai Lukah, as a freshwater wetland, most of the area (> 95 %) was being covered by wetland vegetation and the area was permanently inundated as shown in Figure 5.8 Figure 5.8: The wetland area that is permanently inundated and filled with wetland vegetation As for the instream habitat, almost 15% of the whole reach studied of Sungai Tui comprised of either partially or fully submerged large woody debris or leafy debris. However in Sungai Mengkibol, the percentage of area covered by instream habitat is less than 5% as the studied reach was previously being cleaned and dredged for rehabilitation purpose. On the other hand, Lukah wetland area is an area with dense wetland vegetation and submerged woody and leafy debris. The whole area that is inundated would be filled with the vegetation and the roots of trees that have been 79 removed for the purpose of building access road for logging and plantation. Figure 5.9 as follow illustrates an example of the submerged woody debris where the swamp fishes seek for food and protection. Figure 5.9: A submerged woody debris Based from the previous study conducted by Nurul Huda (2008), the riverbed sediment of Sungai Tui could be categorized as well-graded (Cu > 5) and comprises mainly of gravel (26.72 % composition from sieve analysis), finer sand and silt. Meanwhile for Sungai Mengkibol, the bed sediment mainly comprised of sands and traces of litter could also be found that covered 0.34% of the wetted area. However for Sungai Lukah no test on the sediments was carried out. However, from observation the main sediments were clayey silt and compose as shown in Figure 5.10. 80 Figure 5.10: Bed and bank sediments at the downstream of Sungai Lukah Table 5.9: Range of values of channel form and instream habitat characteristic in Sungai Tui Sungai Tui Channel Form Bank angle ( degree) Banktop height (m) Banktop width (m) Percentage trees (woody vegetation > 3 m tall) Percentage shrub (woody vegetation < 3 m tall) Percentage herbaceous vegetation Percentage bare soil Range 20 - 75 0.4 - 1.8 4.5 - 8.5 0 - 33 3.5 - 33 30 - 93 2.5 - 32 Instream Habitat Depth (m) Mean velocity (m/s) Wet width (m) Percentage silt/clay Percentage sand Percentage gravel Percentage rock/cobble Percentage leaf litter Percentage woody debris per m2 Percentage root mass per m2 Percentage canopy cover per m2 0.17 - 1.3 0.15 - 0.33 1.6 - 8.5 8.5 - 53 0.25 - 14 0.3 - 5 0 - 17 6 - 30 3 - 12 0-2 0-2 81 Table 5.10: Range of values of channel form and instream habitat characteristic in Sungai Mengkibol. Sungai Mengkibol Channel Form Range Bank angle ( degree) Banktop height (m) Banktop width (m) Percentage trees (woody vegetation > 3 m tall) Percentage shrub (woody vegetation < 3 m tall) Percentage herbaceous vegetation Percentage artificial structure Percentage bare soil 35 - 90 3.5 - 5 15 - 23 0 - 15 0 - 30 30 - 84 0 - 35 0.5 - 25 Instream Habitat Depth (m) Mean velocity (m/s) Wet width (m) Percentage sand Percentage litter per m2 Percentage artificial boulder/concrete per m2 Percentage woody debris per m2 Percentage canopy cover per m2 0.02 - 0.85 0.22 - 1.06 7.5 - 16.70 35 - 78 3 - 35 0 - 10 0-5 0-8 Figure 5.11 shows the relative abundance of channel units for Sungai Tui and Sungai Mengkibol. Sungai Mengkibol has lower total number of channel units (20), while Sungai Tui has 27 units. The study on Sungai Tui had proven that the river comprised mostly of pools that mainly occurred at the river meanders, while Sungai Mengkibol had less number of channel units as it was generally a straight channel. The distribution of channel units especially riffle had been reduce as there were river bed cleaning works carried out prior to sampling works were conducted. The lack of woody debris had resulted in the reducing of riffle in the channel. As for Sungai Tui, the presence of larger percentage of woody debris had provided good habitat for the fish and prawns to live. Sungai Lukah assessment did not provide any data for the channel unit as the area was inundated with no or minimum water flowing on the wetland area and the Sungai Lukah itself it inaccessible for data collection. 82 Relative Abundance of Channel Units 14 12 Total Number 10 8 Sg Tui Sg Mengkibol 6 4 2 0 Run Riffle Pool Types Figure 5.11: Estimated relative abundance of channel units for the rivers 5.3 Water Quality Assessment The surface water quality for the rivers were analysed by the application of the Department of Environtment (DOE) values of Water Quality Index (WQI) and Interim Water Quality Standard (INWQS). The water level of Sungai Tui was decreased due to a long period of dry episodes. The same condition was observed at Sungai Mengkibol. For Sungai Lukah, the second event that occurred during November was raining season. Even during the sampling day, was a short drizzle. However, the last event was done in a fine weather but it rained the day prior to sampling work. 83 As illustralised in Figure 5.12, the WQI results shows that Sungai Tui was in Class III, Sungai Mengkibol was in Class IV and the upstream of Sungai Lukah (the swamp area) was in Class III; along with the downstream of Sungai Lukah was also in Class III. Based on the Classification by DOE, Class III could only sustain tolerant or hard river species and a water body that is classified into Class IV is suitable for irrigation only. Sungai Mengkibol water quality was expected as the river served as the main stormwater drainage that catered the entire Kluang town. The water quality index for Sungai Tui showed that even though the river was located in the upstream, since the surrounding of this reach was mainly shrubs and palm oil plantation, thus the degradation of water quality was associated with the dissolved nutrients from the plantation as well as the suspended organic matter and sediments. On the other hand, the water qualities of both upstream and downstream of Sungai Lukah were not as expected. From observation, the water is nice and clear. However, the new plantation development surrounding the wetland area might contribute to the elevation of nutrient levels in the water by the utilization of fertilizers. Cl I Cl II Cl III Cl IV Cl V Figure 5.12: Water Quality Index of the respective rivers. 84 Although the WQI values displayed acceptable water quality, the results of Sungai Tui was remarkably high especially for BOD5, COD and AN. Both BOD5 (11.76 mg/L) and COD (60 mg/L) values, were within Class IV of INWQS as displayed in Table 5.11. AN value was also high (Class III), however this could be considered as normal as the reach flows through agricultural lands. The turbidity was also high and this was clearly shown by the muddy, brownish water throughout the river. The increased siltation of the water column and stream bed might be caused by the reduced flow in river (Growns, 2008). High turbid water could also provide suitable hiding conditions from predators. The state of Sungai Mengkibol was very poor and polluted, with the BOD5, COD and AN especially is highly elevated. As for the case of Sungai Lukah; both upstream and downstream, the BOD5, COD, TSS and turbidity were in the best state (Class I) and this reflected the expected water quality during the sampling work. However, the DO level and pH were classified as Class III with the water being slightly acidic. The AN level for the downstream of Sungai Lukah was slightly elevated from the upstream part of the river as new palm oil plantation was launched and the river received a lot of surface runoffs from the plantation. The usage of more fertilizer and lack of surface vegetation had resulted in more of the fertilizers to be washed away during heavy precipitation in the downstream area of Sungai Lukah. Table 5.11: INWQS results for water quality parameters Parameters Sungai Tui Values DO(mg/l) 6.83 BOD5 (mg/l) COD (mg/l) pH AN (mg/l) TSS (mg/l) Turbidity (NTU) Colour 11.76 60 6.77 0.69 9.975 53 471 Class I IV IV I III I IIA − Sungai Mengkibol Values Class 6.53 I 22.87 53 6.91 2.93 68 40 − IV IV I V III IIA − Sungai Lukah Upstream Values Class 3.70 III 0.14 9 6.57 0.09 0.04 1.05 27 I I III I I I IIA Sungai Lukah Downstream Values Class 4.08 III 0.27 12.00 5.31 0.16 0.08 4.33 59 I I III IIA I I IIA 85 5.4 Diversity and Species Richness Diversity indices provide more information about community composition than simply species richness (i.e., the number of species present); they also take the relative abundances of different species into account. The Shannon Weiner index accounts for both abundance and evenness of the species present. It combines two quantifiable measures; the species richness, S (the number of species in the community) and abundance, N (is the total number of individuals in the sample). By using the Shannon Weiner Index formula to calculate diversity (Equation 4.2) and evenness of species (Equation 4.3), the species diversity of all the three rivers could be obtained. From the calculation, the Shannon’s H and evenness value for the three rivers are as listed as in Table 5.13: Table 5.12: Shannon’s H and Evennes, EH value Name of River Shannon's H EH Sungai Tui 2.211 0.715 Sungai Mengkibol 2.012 0.784 Sungai Lukah 1.992 0.719 Theoretically, when there were similar proportions of all subspecies then evenness is one, but when the abundances were very dissimilar (some rare and some common species) then the value increases. Based on the results as displayed in Tables 5.2, 5.5 and 5.8, when the subspecies distribution is near similar such as in Sungai Mengkibol, the value of the evenness decreases. 86 2.5 2.211 2.012 1.992 2 1.5 H, E Shannon's H EH 1 0.715 0.784 0.719 0.5 0 Sungai Tui Sungai Mengkibol Sungai Lukah Station Figure 5.13: Diversity, Shannon’s H and evenness, EH for the respective rivers. 5.5 Fish Assemblages, Physical Characteristics, Water Quality Relationship Previous understanding in the quality of a good river was to maintain the best water quality in order to support fishes in abundant or of high economical value. However, based on the results displayed in this research, some species such as Temperas Mata Merah and Bujuk which are discovered at Sungai Lukah and also Terbul, Kawan and Seluang Sumatera, which were categorized as non-tolerant species, were proved to be the most abundant in Sungai Tui which both were categorized as Class III according to WQI. On the other hand, Sungai Mengkibol which was in polluted condition had proven to only capable in providing suitable environment for very tolerant fish species such as Armoured Catfish. Thus, the statement that water quality remained the only factor influencing the abundance and assemblage of species in a water body was 87 inaccurate. Therefore, channel and habitat features could also be influencing the fish existence and abundance. 5.5.1 Species Migration and Introduced Species All the rivers studied demonstrated a diverse and rich population of fishes, given that the studied reach and point were quite short. For Sungai Lukah wetland area, all the species discovered are the type of fish that usually inhabit a slow moving or stagnant water. None of the species caught are classified as migratory fish. Randomly picked date of sampling, Sungai Tui was proven to be constantly rich in species abundance. One possible factor that contributed to the species richness in the river was the species migration from Sungai Muar. As one of the few tributaries of Sungai Muar, that was well-known for the predators such as crocodile, the species migration from Sungai Muar by smaller fish and crustaceans such as Udang Galah, were to seek protection and better spawning grounds. In addition, being in a lowland area, due to recent flood episodes and heavy precipitation, the water overflowed into its tributaries, migrating along the species inhabiting the main stream. On the other hand, the same migration factor as in Sungai Tui might be applied at Sungai Mengkibol. The hardy and tolerant fish such as Armoured Catfish and Tilapia Hitam might be introduced into Sungai Mengkibol through various factors such as intentionally released by fish breeders and aquarist. The species are classified as invasive species as they are highly productive and could be a possible thread to native species. These invasive species could affect the physical, biological and ecological condition of rivers; thus would restrict the recovery of native species from disturbance. 88 5.5.2 Water Clarity and Vegetation The flooding of a wetland area besides ‘desynchronizing’ the water movement from a number of tributaries entering the same channel ant the same time by spreading it over a large area, also contributes to sediment trapping by the wetland vegetation. As the water moves slowly among the wetland vegetation, the sediments brought along by the water are trapped. The further the water travels, more the sediments are being deposited to the bottom of the surface bed. As the water reach the main channel, the clarity of the water has been highly improved. The vegetation of the wetland also works as an ‘absorber’ to help decreasing the nitrogen and phosphorus in the water as the vegetation accumulates the nutrients for its growth. The water of Sungai Lukah wetland had shown high clarity. However the colour is slightly ‘teaish’ as the presence of tannin is high due to the decomposition process of the wetland. Due to this process humic acid are produced. Even though the humic acid is not that acidic, however if the acid is produced in a lot in an area, this could decrease the pH of the water. This was proven as the pH especially for the downstream area of Sungai Lukah wetland was slightly acidic. As for Sungai Tui and Sungai Mengkibol, the rivers are flowing faster than Sungai Lukah wetland and also with less presence of vegetation inside the river itself. This has resulted in the inability for sediment deposition due to slow water movement. However, the high turbidity level of Sungai Tui has provided protection from predators for the river species. 89 5.5.3 Woody Debris, Vegetation and Bed Material Woody debris might greatly affect channel form and process by increasing or decreasing the stability of banks, influencing the sediment transport and creating fish habitat (Woodlot Alternatives, 2000). Besides vegetation, the presence of woody debris in the water has significantly creates a suitable habitat for fish spawning and protection from predator for Sungai Lukah. This could be indicated by the presence of abundance of yearlings observed at the sampling site. Furthermore most of the abundant fish species captured in Sungai Lukah are the type of fish that feeds on the zooplankton and other small crustacean that lives on the woody debris. Animals (mostly microconsumers) feeding on algae or involved in shredding and consuming leaves and fine litter are the key components of aquatic ecosystems as they, in turn, bocomes food for larger aquatic lives (macroconsumers) such as fish and crustaceans (Rutherfurd et al., 2002). On the other hand, the decomposition process that occurs in the water has provided the best habitat for some species such as Haruan and Bujuk that have a preference to live in a stagnant water area and hiding under the decomposing matter. On the other hand, the rich species and abundance in Sungai Tui are higly influenced by the large woody debris distribution in the river. However, since large woody debris is considered aesthetically unpleasant, often in river rehabilitation work such as in Sungai Mengkibol, it is removed. CHAPTER VI CONCLUSION AND RECOMMENDATION 6.1 Conclusions Previous understanding in the quality of a good river is to maintain the best water quality in order to support fishes in abundance or of high economical value. Although water quality could be improved and could be regarded as one of the success stories of river rehabilitation, the return of indigenous flora and fauna has been a slow and often unpredictable process. Thus, stream and river management nowadays could not only focus on the improvement of the river alone. This is because rivers, streams, and wetlands work as an integrated ecosystem in maintaining the stability and function of a water body. Often the wetland that mainly serves as a catchment area of a river is being overlooked in a river improvement or rehabilitation project. This study put forward that the changes in fish species assemblages are related mainly to the presence and conditions of the habitat structure and habitat loss, rather than other factors such as physico-chemical assessment. Sungai Lukah wetland, being 91 the last vestige of non-peaty, freshwater swamps in Johor, it displays a rich and diverse fish composition with 16 species belonging to 7 families despite the water quality is classified in Class III of WQI. In addition, most of the discovered fish species of Sungai Lukah are categorized as non-tolerant species and could only be found in the slow moving or stagnant water such as Temperas Mata Merah. Besides, the species composition of Sungai Tui also displays its richness and diversity (22 species belonging to 10 families) disregarding the water quality and the channel condition. Some of the species inhabiting Sungai Tui has high economical value such as Ketutu, Sebarau and Udang Galah. On the other hand, Sungai Mengkibol condition shows obviously that the rehabilitation works that has been completed only focused on the flood mitigation efforts and beautification of the riversides and the biota restoration is completely neglected. The river has recorded to inhabit predominantly by tolerant and invasive fish species, such as Armoured Catfish, whilst the instream habitat composition and distribution is very low. The wetland vegetation plays an important role in ‘desynchronizing’ the water movement to prevent flooding on the downstream part where the runoff water is temporarily stored causing the flood water reaching the same channel at different period. The Lukah Wetland might also plays a role as ‘buffer zone’ to the water that flows into the wetland by removing the high nutrient content such as phosphorus and nitrogen in the water that might originate from the palm oil plantation on the perimeter of the area. Besides, the presence of the wetland vegetation that covers nearly 95% of the total area along with the slow moving waters of Lukah Wetland has resulted in the sediment deposition to the bed, hence increasing the water clarity and quality simultaneously. Besides, the present of woody debris along with the wetland vegetation in the wetland has increased the habitat quality of the biota as it provides habitat, food and also protection from the predators. Zooplankton and other small crustacean that lives on the woody debris are being fed by the wetland fishes. Whilst, the decomposition of vegetation in the surface bed of the wetland along with the dense vegetation provides good habitat and hiding place for certain kind of fishes. 92 As for the water quality, both the upstream and the downstream parts of Sungai Lukah are classified as Class III in the WQI. The DO level of both sampling point were low due to the stagnant or slow-flowing water. Furthermore, the presence of the decomposing of plants in the water has increased the pH value to be acidic due to the production of humic acid in the water from the decomposing process. However, other parameters such as BOD, COD and especially TSS and turbidity indicate that the water is very clean. Whilst Sungai Tui is also classified in Class III and Sungai Mengkibol is in Class IV of the WQI classification. As a conclusion, the planning of river rehabilitation projects that has always been only in small scale and only involving in improving a certain stretch of the river should take into consideration the wetland areas that always bordered a river as watershed. Particularly, if the downstream and especially upstream area of the river is still degraded, this would affect the effectiveness of the project. Therefore, river rehabilitation process should always include the watershed management and improvements as they work as an integrated ecosystem in order to achieve sustainable and living rivers. 6.2 Recommendations For further improvement of this research, some of the recommendations for future works in order to understand better the relationship of habitat distribution and fish species composition are as follows: 93 i) More sampling work should be conducted in evaluating the wetland area as the area is vast and the assessments were done only in the accessible part of the wetland. ii) The influence of sampling time should be taken into consideration. This is because for example the raining season and dry season would affect the fish species composition due to the flooding effect and water level increase and decrease. Even the sampling time during day and night time would differ as some species tends to be nocturnal. iii) For wetland habitat assessment, the River Habitat Survey form is not very applicable as wetlands morphology is different from the river itself. Thus, further study should be done in how to evaluate a wetland by implementing a better approach such as the Hydrogeomorphic Index (HGM) in assessing the value of a wetland. 94 7.0 REFERENCE Angermeier, P.L and Davideanu, G. (2004). Using Fish Communities to Assess Streams in Romania: Initial Development of an Index of Biotic Integrity. Hydrobiologia. 511: 65-78. Kluwer Academic Publishers. Angermeier, P.L. and Karr, J.R. (1983). Fish communities along environmental gradients in a system of tropical streams. Environmental Biology of Fishes. 9(2): 177 – 135. Dr. W. Junk Publishers. In Nurul Huda Adnan (2008). Fish Habitat Assessment for River Rehabilitation. Universiti Teknologi Malaysia. Msc Thesis. Barbour, M.T., Gerritsen, J., Synder, B.D., and Stribling, J.B. (1999). Rapid Bioassessment Protocols for Use in Streams and Wadeable Rivers: Periphyton, Benthic Macroinvertebrates and Fish, 2nd Edition. EPA-440-5-91-002. U. S. Environmental Protection Agency, Office of Water, Washington, DC. Belovsky, G.E. (2002) Ecological stability :reality, misconceptions and implications for risk assessment. Journal of Human and Ecological Risk Assessment 8(1). pp 99 108 Bencala, K.E (1984). Interaction of solutes and streambed sediment. 2. A dynamic analysis of coupled hydrologic and chemical processes that determine solute transport. Water Resour. Res. Vol. 20, pp 1804-1814 Brookes, A., Shields, F.D., Jr (1996) River Channel Restoration – Guiding Principles for Sustainable Projects. West Sussex: John Wiley & Sons Ltd. Burke, D.G., Meyers, E.J., Tiner, R.W., and Groman, H. (1988). What are wetlands, and why are they important? In Protecting Nontidal Wetlands. Planning Advisory Service Report No. 412/413, Chicago, IL: American Planning Association. pp. 116. Dunn, H. (2000) Identifying and Protecting Rivers of High Ecological Value, Occasional Paper No. 01/00. Canberra: Land and Water Resource Research and Development Corporation. 95 EarthTrends (2007). Water Resources and Freshwater Ecosystems – Malaysia. Unpublished. Available online at: http://earthtrends.wri.org/ Environment Agency (2003). River Habitat Survey in Britain and Ireland. Field Survey Guidance Manual: 2003 Version. United Kingdom: Environment Agency. FishBase (2009). Froese, R. and Pauly, D. (Ed.). World Wide Web electronic publication. Available online at: http://fishbase.org/ Fortner, S.L. and White, D.S. (1988). Interstitial water patterns: a factor influencing the distribution of some lotic aquatic vascular macrophytes. Aquatic Botany Vol. 31. pp 1-12. Friedrich, G., Chapman, D., and Beim, A. (1992). The use of biological material. Chapter 5 in Water Quality Assessment – A Guide to Use of Biota, Sediments and Water in Environmental Monitoring, 2nd edition. Gerhad, P., Moraes, R., Molander, S. (2004). Stream Fish Communities and Their Associations to Habitat Variables in a Rain Forest Reserve in Southeastern Brazil. Environmental Biological of Fishes. 71: 321-349. Kluwer Academic Publishers. Gordon, N.D., McMahon, T.A., Finlayson, B.L., Gippel, C.J., Nathan, R.J (2004) Stream Hydrology: An Introduction to Ecologist, Second Edition. West Sussex, England: John Wiley & Sons Ltd. Hamzah, H. and Mahamud, A. (2007). Johor: The Sinking State? Case Study of District of Muar and Batu Pahat, Introduction of FHM. East and Southeast Asia Reginal Seminar on Flood Hazard Mapping. 8 February. Unpublished. Department of Irrigation and Drainage. Idaho Fish and Game (2007). Available online at: http://fishandgame.idaho.gov/cms/wildlife/wetlands/types.cfm Karr, J.R. (1996). Ecological integrity, and ecological health are not the same. In Schulze, P.C. (ed), National Academy of Engineering, Engineering Within Ecological Constrains. Washington DC: National Academy Press, pp 97 – 109. 96 Karr, J.R. and Chu, E.W. (1999). Restoring Life in Running Waters: Better Biological Monitoring. Washington DC: Island Press. Keddy, P.A. (2000). Wetland Ecology: Principles and Conservation. United Kingdom: Cambridge University Press. Loeb, S.L. (1994). An ecological context for biological monitoring. In Loeb, S.L. and Spacie, A., Biological Monitoring of Aquatic Ecosystems. Florida: Lewis Publishers. pp. 3-10. Lowe-McConnell, R.H. (1975). Fish Communities in Tropical Freshwaters. Their Distribution, Ecology and Evolution. London: Longman. Majlis Daerah Muar (2008). Statistic Penduduk 2007. Rancangan Tempatan Daerah Muar. Majlis Daerah Muar. Majlis Perbandaran Kluang (2004). Rancangan Tempatan Daerah Kluang 2002-2010. Majlis Perbandaran Kluang. Meffe, G.K., and Sheldon, A.L. (1990). Post-Defaunation recovery of fish assemblages in soutern blackwater streams. Ecology 71. pp. 657-667 Mitsch, W.J. and Gosselink, J.G. (2000). Wetlands, 3rd Ed. New York: Jon Wiley and Sons, Inc. Mitsch, W.J. and Gosselink, J.G. (2007). Wetlands, 4th Ed. New York: Jon Wiley and Sons, Inc. Mohsin, A.K.M., and Ambak, M.A. (1983). Freshwater Fishes of Peninsular Malaysia. Malaysia: Penerbit Universiti Pertanian Malaysia. pp. 15 – 225. In Nurul Huda Adnan (2008). Fish Habitat Assessment for River Rehabilitation. Universiti Teknologi Malaysia. Msc Thesis. Moyle, P.B. (1994). Biodiversity, biomonitoring, and the structure of stream fish communinities. In Loeb, S.L. and Spacie, A., Biological Monitoring of Aquatic Ecosystems. Florida: Lewis Publishers. pp. 171-186 Nelson, J.S. (2006). Fishes of the World. 4th edition. United States: John Wiley & Sons, Inc. pp. 139 – 184. In Nurul Huda Adnan (2008). Fish Habitat Assessment for River Rehabilitation. Universiti Teknologi Malaysia. Msc Thesis. Nurul Huda Adnan (2008). Fish Habitat Assessment for River Rehabilitation. Universiti Teknologi Malaysia. M.Eng. Thesis. 97 OTA (Office of Technology Assessment) (1984). Wetlands: Their Use and Regulations. Washington, DC: US Government Printing Office, OTA-F-166. In Williams, M. (1990) Wetlands: A Threatened Landscape. Oxford: Basil Blackwell Ltd. Peet, R.K. (1974). The measurement of species diversity. Annual Review of Ecology and Systematics, Vol. 5. pp 285-307. Petts, G.E. and Foster, I. (1985). Rivers and Landscape. London: Edward Arnold. Plafkin, J.L., Barbour, M.T., Porter, K.D., Gross, S.K, Hughes, R.M. (1989). Rapid Bioassessemnt Protocols for Use in Streams and Rivers: Benthic Macroinvertebrate and Fish. EPA/444//489-001. Washington, DC. Richardson, C.J. (1994). Ecological functions and human values in wetlands: A framework for assessing forestry impacts. Wetlands 14:1-9. Roni, P., Hanson, K., Beechie, T., Pess, G., Pollock, M., Bartley, D.M. (2005) Habitat Rehabilitation for Inland Fisheries: Global Review of Effectiveness and Guidance for Rehabilitation of Freshwater Ecosystems. Rome: Food and Agriculture Organization of The United Nations. Rutherford, I., Marsh, N., Price, P., and Lovett, S. (2002). Managing woody debris in rivers. Fact Sheet 7. Canberra: Land & Water Australia. Spellman, F.R. (1996). Stream Ecology and Self-purification: An Introduction for Wastewater and Water Specialist.U.S.A.: Technomic. Tiner, R.W. (1984). Wetlands of the United States: Current Status and Recent Trends. Washington, DC: Fish and Wildlife Service. In Williams, M. (1990) Wetlands: A Threatened Landscape. Oxford: Basil Blackwell Ltd. Townsend, C.R., Hildrew A.G. (1994). ‘Species traits in relation to habitat templet for river systems.’ Freshwater Biology. pp 265-275. Triska, F.J., Kennedy, V.C., Avanzino, R.L., Zellweger, G.W. and Bencala, K.E.(1989a). Retention and transport of nutrients in a third-order stream: channel processes.Ecology Vol. 70. pp 1877-1892. Triska, F.J., Kennedy, V.C., Avanzino, R.L., Zellweger, G.W. and Bencala, K.E.(1989b). Retention and transport of nutrients in a third-order stream in northwestern California: hyporheic processes. Ecology Vol. 70. pp 1893-1905. 98 Turner, R.E. and Boesch, D.F. (1988). Aquatic animal production and wetland relationships: insight gleaned following wetland loss or gain. In Williams, M. (1990) Wetlands: A Threatened Landscape. Oxford: Basil Blackwell Ltd. U.S. EPA (1989). EPA/444/4-89-001. United States: Environmental Protection Agency. U.S. EPA (2002). EPA 822-R-02-014. Methods for evaluating wetland condition: Vol.1 Introduction to Wetland Biological Assessment. United States: Environmental Protection Agency. Van der Valk, A.G., Davis, C.B., Baker, J.L. and Beer, C.E. (1979). Natural freshwater wetlands as nitrogen and phosphorus traps for land runoff. In Williams, M., Wetlands: A Threatened Landscape. Oxford: Basil Blackwell Ltd. Wetland International Malaysia (2007). Ecological assessment of potential Ramsar sites in South-East Johor, Malaysia. Available online at: http://malaysia.wetlands.org/WHATWEDO/Allourprojects/tabid/513/mod/601/ar ticleType/ArticleView/articleId/99/Default.aspx Williams, M. (1990). Wetlands: A Threatened Landscape. Oxford: Basil Blackwell Ltd. Woodlot Alternatives (2000). Aquatic Habitat Assessment: 11/2 Mile Reach – GEPittsfield/Housatonic River Side, Pittsfield Massachusetts. Unpublished. Woodlot Alternatives.Inc. Ziglio, G., Siligardi, M., and Flaim, G., (2006) Biological monitoring of Rivers: Applications and Perspectives. West Sussex: John Wiley & Sons Ltd. pp 135153. 99 APPENDIX A RIVER HABITAT SURVEY FORM RIVER HABITAT SURVEY 2003 VERSION: SITE HEALTH AND SAFETY ASSESSMENT 1 Site Number : Site Ref: River Name: Date: Grid References/Co-ordinates: Spot 12: Mid-site: End of site2: Surveyor Name: Accredited Surveyor Code: 1 Leave blank if new site. 2 Optional Weather Conditions: Flow Conditions: Site details: (enter comments or circle if applicable and give details) Risk Level (Low/Mod/High) Access and Parking: (entry & exit) Conditions: comment on ground stability, footing, exposure/remoteness Obstacles/Hazards: fencing, stiles, dense vegetation, steep bank Occupied/Unoccupied: people, livestock, animals Activities/Land-use: agriculture, woodland, residential, industrial, construction, recreational Risk if lone-working IF THERE ARE ANY HIGH RISKS OR MORE THAN THREE MODERATE RISKS DO NOT CONTINUE WITH THE SURVEY. Weil’s Disease (Leptospirosis) Instructions to card holders 1. As infection may enter through breaks in the skin, ensure that any cut, scratch or abrasion is thoroughly cleansed and covered with a waterproof plaster. 2. Avoid rubbing your eyes, nose and mouth during work. 3. Clean protective clothing, footwear and equipment etc. after use 4. After work, and particularly before taking food or drink, wash hands thoroughly. 5. Report all accidents and/or injuries, however slight. 6. Keep your card with you at all times. Lyme Disease 1. Dress appropriately with skin covered up. 2. Regularly inspect for ticks when in the field. 3. Check for, and remove, any ticks as soon as possible after leaving the site. 4. Seek medical attention if bitten by a tick. River Habitat Survey Manual: 2003 version 2.2 RIVER HABITAT SURVEY 2003 VERSION: SPOT-CHECK KEY Page 1 of 2 PHYSICAL ATTRIBUTES (SECTION E) CHANNEL BANKS Predominant bank material NV = not visible BE = bedrock BO = boulder CO = cobble GS = gravel/sand EA = earth (crumbly) PE = peat CL = sticky clay CC = concrete SP = sheet piling WP = wood piling GA = gabion BR = brick/laid stone RR = rip-rap TD = tipped debris FA = fabric BI = bio-engineering materials Bank modifications Predominant substrate Channel modifications NK = not known NO = none NV = not visible NK = not known NO = none RS = resectioned (reprofiled) RI = reinforced PC = poached PC(B) = poached (bare) BM = artificial berm EM = embanked Marginal and bank features NV = not visible (e.g. far bank) NO = none Predominant flow-type EC = eroding cliff (EC if sandy substrate) SC = stable cliff (SC if sandy substrate) PB = unvegetated point bar VP = vegetated point bar SB = unvegetated side bar VS = vegetated side bar NB = natural berm BE = bedrock BO = boulder CO = cobble GP = gravel/pebble (G or P if predominant) SA = sand SI = silt CL = clay PE = peat EA = earth AR = artificial NV = not visible FF = free fall CH = chute B = broken standing UW waves (white water) UW = unbroken standing waves CF = chaotic flow RP = rippled UP = upwelling SM = smooth NP = no perceptible flow DR = no flow (dry) CV = culverted RS = resectioned RI = reinforced DA = dam/weir/sluice FO = ford (man-made) Channel features NV = not visible NO = none EB = exposed bedrock RO = exposed boulders VR = vegetated rock MB = unvegetated midchannel bar VB = vegetated midchannel bar MI = mature island TR = Trash (urban debris) FLOW-TYPES DESCRIPTION FF: Free fall clearly separates from back-wall of vertical feature ~ associated with waterfalls CH: Chute low curving fall in contact with substrate ~ often associated with cascades BW: Broken standing waves white-water tumbling waves must be present ~ mostly associated with rapids UW: Unbroken standing waves upstream facing wavelets which are not broken ~ mostly associated with riffles CF: Chaotic flow a chaotic mixture of three or more of the four fast flow-types with no predominant one obvious RP: Rippled no waves, but general flow direction is downstream with disturbed rippled surface ~ mostly associated with runs UP: Upwelling heaving water as upwellings break the surface ~ associated with boils. SM: Smooth perceptible downstream movement is smooth (no eddies) ~ mostly associated with glides NP: No perceptible flow no net downstream flow ~ associated with pools, ponded reaches and marginal deadwater DR: No flow (dry) dry river bed Scale NB: assessed by intermediate axis Coarse sand Gravel Pebble SA 2.3 GP Cobble (to size of A4 page) CO River Habitat Survey Manual: 2003 version RIVER HABITAT SURVEY: SPOT-CHECK KEY LEFT Banks are determined by looking downstream Page 2 of 2 RIGHT CHANNEL MODIFICATION INDICATORS One or more of the following may be indicative of resectioning: 1. Uniform bank profile 2. Straightened planform 3. Bankfull width/bankfull height ratio <4:1 4. Uniform/low energy flow-types 5. No trees/uniformly-aged trees along bank 6. Intensive/urban land-use LAND-USE WITHIN 5m OF BANKTOP (SECTION F) & 50m (SECTION H) BL = BP = CW = CP = SH = OR = WL = MH = Broadleaf/mixed woodland (semi-natural) Broadleaf/mixed plantation Coniferous woodland (semi-natural) Coniferous plantation Scrub & shrubs Orchard Wetland (e.g. bog, marsh, fen) Moorland/heath AW = Artificial open water OW = Natural open water RP = Rough unimproved grassland/pasture IG = Improved/semi-improved grassland TH = Tall herb/rank vegetation RD = Rock, scree or sand dunes SU = Suburban/urban development TL = IL = PG = NV = Tilled land Irrigated land Parkland or gardens Not visible BANKTOP AND BANKFACE VEGETATION STRUCTURE To be assessed within a 10m wide transect (SECTION F) vegetation types bare B bare earth/rock etc. uniform U predominantly one type (no scrub or trees) bryophytes short/creeping herbs or grasses simple S two or three vegetation types tall herbs/ grasses scrub or shrubs complex C four or more types saplings and trees Channel dimensions guidance (Section L) Select location on uniform section. Cross-section of channel showing definitions used to define where spot-check recording and channel dimensions measured If riffle is present, measure there. If not, measure at straightest and shallowest point. Break in slope Bankface vegetation structure Vegetation structure within 1m of banktop Bank slope too steep for cultivation Banktop = first major break in slope above which cultivation or development is possible. Land-use within 5m and 50m Banktop height Bankfull width Bankfull = point where river first spills on to floodplain. Bankfull height Banktop and Bankfull height Water width Water depth EMERGENCY HOTLINE 0800 80 70 60 24 hour free emergency telephone line for reporting all environmental incidents relating to air, land and water. River Habitat Survey Manual: 2003 version 2.4 Page 1 of 4 RIVER HABITAT SURVEY 2003 Version A FIELD SURVEY DETAILS leave blank if new site Site Number: Is the site part of a river or an artificial channel? Site Reference: Are adverse conditions affecting survey? Spot-check 1 Grid Ref: If yes, state ........................................................................................ Spot-check 6 Grid Ref: Is bed of river visible? barely or not End of site Grid Ref: Yes + entirely partially Yes No Number of photographs taken: River name: / Artificial No Is health and safety assessment form attached? Reach Reference: Date River Photo references: /20 Time: Site surveyed from: left bank right bank channel Surveyor name: When options shown with ‘shadow boxes’, tick one box only Accredited Surveyor code: B LEFT banks determined by facing downstream PREDOMINANT VALLEY FORM (within the horizon limit) RIGHT (tick one box only) (tick one box only) concave/bowl shallow vee asymmetrical valley deep vee U-shape valley gorge Distinct flat valley bottom? C no obvious valley sides No Yes Natural terraces? NUMBER OF RIFFLES, POOLS AND POINT BARS Yes (enter total number in boxes) Riffle(s) Unvegetated point bar(s) Pool(s) Vegetated point bar(s) D No ARTIFICIAL FEATURES (indicate total number of occurrences of each category within the 500m site) If none, Weirs/sluices tick Culverts box Bridges Major Intermediate Minor Major Intermediate Minor Outfalls/ intakes Fords Deflectors/ groynes/croys Other - state Is channel obviously realigned? No Is channel obviously over-deepened? No Is water impounded by weir/dam? No 2.5 Yes, <33% of site Yes, <33% of site Yes, <33% of site River Habitat Survey Manual: 2003 version >33% of site >33% of site >33% of site RIVER HABITAT SURVEY: TEN SPOT-CHECKS SITE REF. Spot-check 1 is at: upstream end Page 2 of 4 of site (tick one box) downstream end E PHYSICAL ATTRIBUTES (to be assessed across channel within 1m wide transect) When boxes ‘bordered bordered’, only one entry allowed 1 GPS 2 3 4 5 6 GPS 7 8 9 10 GPS Ring EC or SC if composed of sandy substrate LEFT BANK Material NV, BE, BO, CO, GS, EA, PE, CL, CC, SP, WP, GA, BR, RR, TD, FA, BI Bank modification(s) NK, NO, RS, RI, PC(B), BM, EM Marginal & bank feature(s) NV, NO, EC, SC, PB, VP, SB, VS, NB CHANNEL Channel substrate Flow-type GP- ring either G or P if predominant NV, BE, BO, CO, GP, SA, SI, CL, PE, EA, AR NV, FF, CH, BW, UW, CF, RP, UP, SM, NP, DR Channel modification(s) NV, NO, EB, RO, VR, MB, VB, MI, TR For braided rivers only: number of sub-channels RIGHT BANK Ring EC or SC if composed of sandy substrate Material NV, BE, BO, CO, GS, EA, PE, CL, CC, SP, WP, GA, BR, RR, TD, FA, BI Bank modification(s) NK, NO, RS, RI, PC(B), BM, EM Marginal & bank feature(s) NV, NO, EC, SC, PB, VP, SB, VS, NB F BANKTOP LAND-USE AND VEGETATION STRUCTURE (to be assessed over a 10m wide transect) Land-use: choose one from BL, BP, CW, CP, SH, OR, WL, MH, AW, OW, RP, IG, TH, RD, SU, TL, IL, PG, NV LAND-USE WITHIN 5m OF LEFT BANKTOP LEFT BANKTOP (structure within 1m) B/U/S/C/NV LEFT BANK-FACE (structure) B/U/S/C/NV RIGHT BANK-FACE (structure) B/U/S/C/NV RIGHT BANKTOP (structure within 1m) B/U/S/C/NV Enter channel substrate(s) not occurring as predominant in spot-checks but present in >1% of whole site. Channel feature(s) NK, NO, CV, RS, RI, DA, FO LAND-USE WITHIN 5m OF RIGHT BANKTOP G CHANNEL VEGETATION TYPES None ( (to be assessed over a 10m wide transect: use E ( > 33% area), (present) or NV (not visible) ) or Not Visible (NV) Liverworts/mosses/lichens Emergent broad-leaved herbs Emergent reeds/sedges/rushes/grasses/horsetails Floating-leaved (rooted) Free-floating Amphibious Submerged broad-leaved Submerged linear-leaved Submerged fine-leaved Filamentous algae Use end column for overall assessment over 500m, including types not occurring in spot-checks (use River Habitat Survey Manual: 2003 version , E or NV) 2.6 H Page 3 of 4 RIVER HABITAT SURVEY : 500m SWEEP-UP SITE REF. LAND-USE WITHIN 50m OF BANKTOP L Use (present) or E (> 33% banklength) R Broadleaf/mixed woodland (semi-natural) (BL) Natural open water (OW) Broadleaf/mixed plantation (BP) Rough/unimproved grassland/pasture (RP) Coniferous woodland (semi-natural) (CW) Improved/semi-improved grassland (IG) Coniferous plantation (CP) Tall herb/rank vegetation (TH) Scrub & shrubs (SH) Rock, scree or sand dunes (RD) Orchard (OR) Suburban/urban development (SU) Wetland (e.g. bog, marsh, fen) (WL) Tilled land (TL) Moorland/heath (MH) Irrigated land (IL) Artificial open water (AW) Parkland or gardens (PG) L R L R Not visible (NV) I BANK PROFILES Use (present) or E (> 33% banklength) Natural/unmodified L R Artificial/modified Vertical/undercut Resectioned (reprofiled) Vertical with toe Reinforced - whole Steep (>45 ) Reinforced - top only Gentle Reinforced - toe only Composite Artificial two-stage Natural berm Poached bank Embanked Set-back embankment J EXTENT OF TREES AND ASSOCIATED FEATURES TREES (tick one box per bank) Left Right ASSOCIATED FEATURES (tick one box per feature) E (>33%) Present None Shading of channel None K *record even if <1% Isolated/scattered *Overhanging boughs Regularly spaced, single *Exposed bankside roots Occasional clumps *Underwater tree roots Semi-continuous Fallen trees Continuous Large woody debris EXTENT OF CHANNEL AND BANK FEATURES None (tick one box for each feature) *record even if <1% Present E(>33%) None *Free fall flow Exposed bedrock Chute flow Exposed boulders Broken standing waves Vegetated bedrock/boulders Unbroken standing waves Unvegetated mid-channel bar(s) Rippled flow Vegetated mid-channel bar(s) *Upwelling Mature island(s) Smooth flow Unvegetated side bar(s) No perceptible flow Vegetated side bar(s) No flow (dry) Unvegetated point bar(s) Marginal deadwater Vegetated point bar(s) Eroding cliff(s) *Unvegetated silt deposit(s) Stable cliff(s) *Discrete unvegetated sand deposit(s) *Discrete unvegetated gravel deposit(s) 2.7 River Habitat Survey Manual: 2003 version Present E (>33%) RIVER HABITAT SURVEY : DIMENSIONS AND INFLUENCES SITE REF. L Page 4 of 4 CHANNEL DIMENSIONS (to be measured at one location on a straight uniform section, preferably across a riffle) LEFT BANK CHANNEL RIGHT BANK Banktop height (m) Bankfull width (m) Banktop height (m) Is banktop height also bankfull height? (Y or N) W ater width (m) Is banktop height also bankfull height? (Y or N) Embanked height (m) W ater depth (m) Embanked height (m) If trashline lower than banktop, indicate: height above water (m) = Bed material at site is: consolidated Location of measurements is: riffle M other FEATURES OF SPECIAL INTEREST width from bank to bank (m) = unconsolidated (loose) unknown (state) Use or E (> 33% length) *record even if <1% None Very large boulders (>1m) Backwater(s) Marsh(es) Braided channels *Debris dam(s) Floodplain boulder deposits Flush(es) Side channel(s) *Leafy debris Water meadow(s) *Natural waterfall(s) > 5m high Fringing reed-bank(s) Fen(s) Natural open water *Natural waterfall(s) < 5m high Quaking bank(s) Bog(s) Natural cascade(s) *Sink hole(s) Wet woodland(s) N CHOKED CHANNEL (tick one box) Is 33% or more of the channel choked with vegetation? O Others (state) NOTABLE NUISANCE PLANT SPECIES No Use Yes or E (> 33% length) bankface banktop to 50m None P *record even if <1% bankface banktop to 50m *Giant hogweed *Himalayan balsam *Japanese knotweed *Other (state).......................... OVERALL CHARACTERISTICS (Circle appropriate words, add others as necessary) Major impacts: landfill - tipping - litter - sewage - pollution - drought - abstraction - mill - dam - road - rail - industry - housing mining - quarrying - overdeepening - afforestation - fisheries management - silting - waterlogging - hydroelectric power Evidence of recent management: dredging - bank mowing - weed cutting - enhancement - river rehabilitation gravel extraction - other (please specify) Animals: otter - mink - water vole - kingfisher - dipper - grey wagtail - sand martin - heron - dragonflies/damselflies Other significant observations: if necessary use separate sheet to describe overall characteristics and relevant observations Q ALDERS (tick one box in each of the two categories ) *Alders? None (tick Present Extensive Q ALDERS appropriate box(es)) R FIELD SURVEY QUALITY CONTROL ( *record even if <1% *Diseased Alders? None Present Extensive boxes to confirm checks) Have you taken at least two photos that illustrate the general character of the site and additional photos of any weirs/ sluices and major/intermediate structures across the channel? Have you completed all ten spot-checks and made entries in all boxes in E & F on page 2? Have you completed column 11 of section G (and E if appropriate) on page 2? Have you recorded in section C the number of riffles, pools and point bars (even if 0) on page 1? Have you given an accurate (alphanumeric) grid reference for spot-checks 1, 6 and end of site (page 1)? Have you stated whether spot-check 1 is at the upstream or downstream end of the site (top of page 2)? Have you cross-checked your spot-check and sweep-up responses with the channel modification indicators given on page 2 of the spot-check key? River Habitat Survey Manual: 2003 version 2.8 107 APPENDIX B SKETCHES OF SUNGAI LUKAH Wetland boundaries Main Rivers 108 Sedili Kecil Wetland Aquaculture Shrimp Pond Kemajuan Tanah Lok Heng Selatan (FELDA) Sungai Lukah Ulu Lukah Kemajuan Tanah Papan Timur (FELDA) 109 APPENDIX C SKETCHES OF SUNGAI TUI 110 111 112 113 114 APPENDIX D SKETCHES OF SUNGAI MENGKIBOL 115 Plan View of Sungai Mengkibol 116 APPENDIX E FISH SPECIES CAUGHT IN SUNGAI LUKAH 117 Appendix Fish Species Caught in Sungai Lukah Scientific Name: Cyclocheilichthys apogon Local Name: Temperas mata merah Common Name: Red-eyed Barb Scientific Name: Osteochilus hasselti Local Name: Terbul Common Name: Hasselt’s Bony Lip Barb Scientific Name: Rasbora elegans Local Name: Seluang 2 titik Common Name: Two-spot Rasbora Scientific Name: Rasbora gracilis Local Name: Seluang Bada Common Name: Blackstripe Rasbora 118 Scientific Name: Puntius lateristriga Local Name: Baguh Common Name: Spanner Barb Scientific Name: Puntius binotatus Local Name: Tebal Sisek Common Name: Common Barb Scientific Name: Puntius binotatus Local Name: Sepat Ronggeng Common Name: Two-spot Gouramy Scientific Name: Luciocephalus pulcher Local Name: Tembok Tebing Common Name: Geddehoved 119 Scientific Name: Pristoplepis fasciatus Local Name: Patung Common Name: Marroon perch Scientific name: Channa micropeltes Local Name : Toman Common Name: Indonesian Snakehead Scientific name: Channa striatus Local Name : Haruan Common Name: Snakehead Scientific Name: Channa lucius Local Name: Bujuk Common Name: Forest Snakehead Scientific Name: Clarias macrocephalus Local Name: Keli Bunga Common Name: Freshwater Catfish 120 Scientific Name: Aplocheilus panchax Local Name: Mata Lalat Common Name: Blue Eye Scientific Name: Dermogenys pusillus Local Name: Julong Common Name: Halfbeak 121 APPENDIX F FISH SPECIES CAUGHT IN SUNGAI TUI 122 Appendix F Fish Species Caught in Sungai Tui Scientific Name: Osteochilus hasselti Local Name: Terbul Common Name: Hasselt’s Bony Lip Barb Scientific Name: Osteochilus vittatus Local Name: Rong Common Name: Sharkminnow Scientific Name: Chela anommalura Local Name: Lalang Common Name: - Scientific Name: Labiobarbus cuvieri Local Name: Kawan Common Name: Signal Barb Scientific Name: Luciosoma trinema Local Name: Jejuang/nyenyuar Common Name: Long-fin Apollo Shark 123 Scientific Name: Crossocheilus oblongus Local Name: Selimang siam Common Name: Barb Scientific Name: Hampala macrolepidota Local Name: Sebarau Common Name: Hampala Barb Scientific Name: Cyclocheilichthys heteronema Local Name: Temperas Common Name: Indian River Barb Scientific Name: Cyclocheilichthys apogon Local Name: Temperas mata merah Common Name: Red-eyed Barb Scientific Name: Rasbora sumatrana Local Name: Seluang Common Name: Signal Barb Scientific Name: Rasbora elegans Local Name: Seluang 2 titik Common Name: Two-spot Rasbora 124 Scientific Name: Pristoplepis fasciatus Local Name: Patung Common Name: Marroon perch Scientific Name: Mystus nemurus Local Name: Baung akar Common Name: Bagrid catfish Scientific Name: Acanthopsis choirorhyhchos Local Name: Lali Common Name: Hoarse-faced loach Scientific Name: Oxyeleotris marmorata Local Name: Ketutu Common Name: Marbled goby Scientific Name: Mastacembelus armatus Local Name: Tilan Common Name: Spiny eel Scientific Name: Channa striatus Local Name: Haruan Common Name: Snake head 125 Scientific Name: Macrobrachium resenbergii Local Name: Udang galah Common Name: Giant River Prawn Scientific Name: Macrobrachium sp Local Name: Udang gantung Common Name: Signal Barb Scientific Name: Krytopteris bicirrhis Local Name: Lais Common Name: Marroon perch 126 APPENDIX G FISH SPECIES CAUGHT IN SUNGAI MENGKIBOL 127 Appendix G Fish Species Caught in Sungai Mengkibol Scientific Name: Osteochilus hasselti Local Name: Terbul Common Name: Hasselt’s Bony Lip Barb Scientific Name: Rasbora sumatrana Local Name: Seluang Common Name: Signal Barb Scientific Name: Labiobarbus cuvieri Local Name: Kawan Common Name: Signal Barb Channa batrychus striatus Scientific Name: Clarias Local Name: Haruan Keli Common Name: Snake Catfishhead 128 Scientific Name: Oreochromis mossambica Local Name: Tilapia hitam Common Name: Mozambique Tilapia Scientific Name: Poecilia phenops Local Name: Common Name: Molly Scientific Name: Hypostomus plecostomus Local Name: Bandaraya Common Name: Amoured Catfish