n° 75 - July-August 2014 Le journal de l'IRD Translations: Technicis Abstracts for the international issue I n Vietnam where he ended his days, Alexandre Yersin, disciple of Louis Pasteur, must be turning in his grave. He discovered the disease agent 120 years ago but the bubonic plague is still rife! It is even endemic in many countries. And while it does not have the reach of its three historic pandemics which periodically wreaked havoc until the late 19th century, it still infects more than 2000 people every year and kills almost 200. Although the disease remains virulent, we are able to treat it and it is now more an issue of access to care and frequency of contact between people and rodents. ird researchers and the Pasteur Institute of Madagascar are seeking to understand the persistence of the illness in the Big Island. The results offer new insight into the monitoring and control of the disease, heralding better-targeted, more effective and less costly strategies. P. 1 News Mobile phones take over M A ntiretroviral treatment has changed the face of the paediatric hiv epidemic, which has become an essentially African phenomenon. Used during pregnancy, childbirth and breast-feeding to prevent the transmission of the virus from the mother to the child, arv drugs have drastically reduced the number of new infections in developing and emerging countries. Where systematic screening and prophylactic treatment are offered, scarcely 0.5% of children born to infected mothers become infected in turn. Thus, in France, the paediatric form of the illness accounts for little more than 1500 patients. Drug combinations have also significantly reduced morbidity and mortality in young sufferers. But paediatric hiv remains a real epidemic in sub-Saharan Africa, home to 90% of the world’s 3.3 million children under 15 infected with the disease. It has long remained unnoticed, overshadowed by the scope of the hiv phenomenon in adults, and health systems have been slow in adapting to the particularities of young patients. In spite of the needs and recommendations of the who, insufficient access to healthcare remains for children, with less than 30% receiving the antiretroviral treatment they require. In the absence of therapeutic care, 52% of infected children die before the age of two and the illness is now the leading cause of death among adolescents in West Africa. p. 3 News Agriculture, genetics and demography A technological, cultural and environmental revolution, the birth of agriculture has played a key role in humanity. A new study has nonetheless questioned its influence on the genetic and demographic history of African populations. Scientists believed that its arrival on the continent 5000 years ago created abundant resources, leading to the expansion of the populations that adopted it. This farming people would then have gradually differentiated genetically from the pygmy huntergatherer communities living in forests. And yet the history of both populations was decided much earlier in evolution. p. 10 Research Winds and ecosystems W © IRD / F.Boyer © MNHN / IRD / A.Froment obile phone operators are no longer the only ones with a vested interest in network quality. Scientists, too, are now paying close attention, extracting valuable rainfall information from data on electromagnetic signal power. This will be of use in a variety of domains including climate, agriculture, food safety, water resource management, water services and drought/ flood warnings. The potential is huge, given that mobile networks cover 20% of the earth’s land mass, i.e. 90% of the world’s population. In cities, in particular, there is a very high network density. Developed by a team of researchers, this approach will produce very precise rainfall maps for areas with increased risk of flooding. The paediatric hiv issue p. 4 Partners On the trail of the dugong W p. 11 Developpment The GAMA success story T © DR © C. Grondin © wikipedia ith a mask and snorkel in the New Caledonian lagoon, a lucky diver may encounter an animal that has fascinated for millennia. The dugong is— among others—at the origin of the Homer sirens legend. And beyond the myth, the dugong remains mysterious for scientists. Tracking is however crucial in order to better understand this endangered animal. Little by little, researchers are uncovering their secrets. The ird has worked for three years alongside the French marine protected areas agency, environmental agents for the archipelago provinces, the wwf (a ngo ) and the Opération Cétacés association as part of a dugong action plan in New Caledonia. p. 5 Partnersr elonging to the same group of viruses as dengue and chikungunya, a newcomer named Zika is causing quite a stir. All the more so since it contaminated 55,000 people in Polynesia at the end of 2013. In light of this recent event, a FrancoGabonese research team has taken a second look at blood samples taken in 2007 during a dengue and chikungunya epidemic in Libreville, Gabon. It was thus deduced that many patients had actually been struck by Zika. This is the first time that a Zika fever epidemic has been highlighted in Africa, and in an urban area at that. Scientists are now pondering the question of whether this is a virulent imported strain or African pathogens until now unnoticed. here is no accounting for taste as the old saying goes. And Peruvians, the world’s primary anchovy fishermen, prefer to eat chicken. They capture an annual six million tonnes of this little pelagic fish in the rich, fish-bearing waters of the Humboldt Current, but they consume no more than 100,000 tonnes. This reticence is hugely paradoxical given that anchovies are both abundant and cheap, and sections of the country, particularly children living inland, suffer from dietary deficiencies linked to a lack of protein. IRD researchers and their partners, including IMARPE, are leading a programme to analyse the situation in the anchovy chain, from the marine ecosystem to the consumer’s plate. This work forms part of a wider programme on the sustainability of the fisheries sector. p. 7 Research Termites: sometimes beneficial, sometimes harmful, always fascinating T hey do not only eat away at structures! Termites, which form fascinating communities and build (in some cases) impressive ‘cathedrals’, are also excellent soil engineers. This is in spite of the minority causing damage to buildings and crops. © Agence régionale de santé de la Guadeloupe B T © IRD / L. Joseph Africa also struck by Zika © IRD - Angel Avadi The anchovy and chicken paradox P. 2 News ind plays a key role in the development of ecosystems, impacting soil erosion, larval dispersal in the ocean and redistribution of water on earth. W ith local harmattan and westerly winds in New Caledonia and inter national trade winds and monsoon winds, its influence is complex. Understanding is crucial, as wind is now combining with human activity to threaten agriculture and fishing. he simulation and modelling platform, christened Gama and developed by i r d i t technicians, offers solutions to the main problems found in souther n countries. In just a few years, it has built an impressive community of users with a variety of backgrounds. This software has been designed to allow scientists and decision-makers to build and run complex, social or natural system models, and to predict their development as a result of diverse changes and events. Specialists were initially seeking to accumulate all i t developments made during institute research programmes, and to prevent them from being lost following culmination of the scientific work. They therefore developed generic software, supported by a series of specialised tools including a dedicated modelling language. Other i t technicians from French and Vietnamese i r d partner university teams also lent a hand. And seven years later, GAMA has achieved significant maturity and renown in the generally specialised niche of simulation, with some 2000 downloads, forums and a library of more than 100 sample models. p. 15 Planet The sterile insect technique A ccording to laboratory tests in semi-controlled conditions, the release of sterile males would lead to a 90 to 95% reduction in populations of the Aedes albopictus mosquito, responsible for the transmission of vector-borne diseases such as chikungunya on the island of Reunion. After successfully overcoming the technological constraints inhibiting the mass production of non-fertile insects during an initial phase conducted between 2009 and 2014, it is now time for ird researchers and their partners to lead a larger study. Until now restricted to observations of mosquitoes in cages, experiments are to begin on larger areas of between 10 and 30 hectares. Consult the articles in full on the IRD Internet site: http://www.ird.fr © Pedaids / J. Hrusa Madagascar: metapopulations of rats and plague p. 8 y 9 Research © IRD / J-M. Duplantier © IRD / F. 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