Mitochondrial maintenance & PGC-1alpha Commentary Cell Science Reviews Vol 6 No 2 ISSN 1742-8130 One more trick in the regulation of PGC-1α Zhen Yan Department of Medicine-Cardiovascular Medicine, Center for Skeletal Muscle Research at Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, VA 22908, USA. Received 24th October © Cell Science 2009 PGC-1α is a transcription coactivator centrally involved in the regulation of energy balance and metabolism. A recent study in Cell Metabolism adds another role for Pgc-1α, namely gene regulation in mitochondrial maintenance and metabolic homeostasis. The latest findings indicate significant increases in levels of DNA methylation within the promoter region of the Pgc-1α gene within human skeletal muscles from subjects with impaired glucose tolerance or type 2 diabetes. The significance and implications of this discovery are discussed. PGC-1α is a transcription coactivator of functional importance in the regulation of metabolism and other biological processes (1-4). A recent study by Barrès et al. in Cell Metabolism points to another new role of the Pgc-1α gene regulation in mitochondrial maintenance and metabolic homeostasis (5). The results showed significant increases of DNA methylation within the promoter region of the Pgc-1α gene in human skeletal muscles from subjects with impaired glucose tolerance or type 2 diabetes. Increased DNA methylation was detected in the promoter region between -337 and -37 from the transcription start site containing the consensus binding site for CREB and ATF2 transcription factors. Of particular note is that the enhanced methylation occurred primarily at non-CpG sites, which in turn led to reduced Pgc-1α transcription and mitochondrial density. The investigators further demonstrated that treatment of human skeletal muscle culture with free fatty acids and tumor necrosis factor-α (TNF-α) for 48 hours reproduced the hypermethylation Mitochondrial maintenance & PGC-1alpha of the Pgc-1α promoter through DNA methyltransferase 3B (DNMT3B). The experiment that demonstrated the direct link between levels of DNA methylation and Pgc-1α transcription was the reduced reporter gene activity in transfected muscle cells following in vitro methylation of the promoter at the CpG site at –260. Although mutation of each or all of the non-CpG sites to prove the importance of non-CpG methylation may not be technically feasible, pharmacological inhibition and promotion of methylation could be employed in cultured myocytes to address this important issue. Precedents have been set in studies in which maternal nutrient supplementation altered fetal epigenome and the coat color of the offspring and their susceptibility to obesity and type 2 diabetes (6,7). It would of great interest to know if dietary interventions would result in changes in non-CpG methylation in the Pgc-1α gene, which is responsible for the adult disease susceptibility phenotype, whereas methylation of the CpG sites within the Avy intracisternal A particle (IAP) retrotransposon of the Agouti gene is known to be responsible for the agouti color coat phenotype. A genetic approach to alter the level of expression or enzymatic activity of DNMT3B within skeletal muscle may also provide additional functional information regarding the epigenetic regulation of the Pgc-1α gene in vivo. Hypermethylation at non-CpG sites within the Pgc-1α promoter appeared to occur rapidly during the methylation process, which questions the long-term impact and significance of non-CpG methylation. This issue is not only relevant in cultured cell models where DNA methylation and its impact upon gene expression may be assessed following withdraw of the stimulus, but also in the situation where its impact may persist over generations in animal models and humans. Previous studies have revealed a great diversity in the regulation of PGC-1α function in decoding various cellular signals and controlling the phenotypic characteristics of various organ systems. For example, PGC-1α activity has been shown to be regulated by post-translational modification through phosphorylation (8), methylation (9), SUMOylation (10), and deacetylation (11). The Pgc-1α gene is also regulated at the transcriptional level by transcriptional control with an autoregulatory loop (12). Functionally, reduced Pgc-1α gene expression has been shown to be associated with conditions of insulin resistance and type 2 diabetes (13), and a missense mutation of the Pgc-1α gene that leads to reduced expression of PGC-1α has been shown to be correlated with type 2 diabetes in certain populations (14-17). More recently, attentions have been directed toward epigenetic regulation of the Pgc1α gene (5,18,19). The fact that variants of the Pgc-1α gene were only correlated with type 2 diabetes in certain population may suggest an environment-gene Mitochondrial maintenance & PGC-1alpha interaction in the development of complex diseases in which genetic variation and environmental factors both contribute to the pathogenesis. Our challenge is not only to figure out how to apply this knowledge, but also to be prepared to learn of and from the ‘tricks’ inherent within our biological system to enable us to treat and prevent complex disease such as type 2 diabetes metillus. References 1. Finck BN, Kelly DP. PGC-1 coactivators: inducible regulators of energy metabolism in health and disease. J Clin Invest. 2006;116(3):615-22. 2. Handschin C, Spiegelman BM. The role of exercise and PGC1alpha in inflammation and chronic disease. Nature. 2008;454(7203):463-9. 3. Knutti D, Kralli A. PGC-1, a versatile coactivator. Trends Endocrinol Metab. 2001;12(8):360-5. 4. Scarpulla RC. Transcriptional paradigms in mammalian mitochondrial biogenesis and function. Physiol Rev. 2008;88(2):611-38. 5. Barrès R, Osler ME, Yan J, Rune A, Fritz T, Caidahl K, Krook A, Zierath JR. Non-CpG methylation of the PGC-1alpha promoter through DNMT3B controls mitochondrial density. Cell Metab. 2009;10(3):189-98. 6. Dolinoy DC, Huang D, Jirtle RL. Maternal nutrient supplementation counteracts bisphenol Ainduced DNA hypomethylation in early development. Proc Natl Acad Sci U S A. 2007;104(32). 7. Dolinoy DC, Weidman JR, Waterland RA, Jirtle RL. Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome. Environ Health Perspect. 2006;114(4):567-72. 8. Jäger S, Handschin C, St-Pierre J, Spiegelman BM. AMP-activated protein kinase (AMPK) action in skeletal muscle via direct phosphorylation of PGC-1alpha. Proc Natl Acad Sci U S A. 2007;104 (29): 12017-22. 9. Teyssier C, Ma H, Emter R, Kralli A, Stallcup MR. Activation of nuclear receptor coactivator PGC-1alpha by arginine methylation. Genes Dev. 2005;19(12):1466-73. 10. Rytinki MM, Palvimo JJ. SUMOylation attenuates the function of PGC-1alpha. J Biol Chem. 2009;284(38): 26184-93. 11. Cantó C, Gerhart-Hines Z, Feige JN, Lagouge M, Noriega L, Milne JC, Elliott PJ, Puigserver P, Auwerx J. AMPK regulates energy expenditure by modulating NAD+ metabolism and SIRT1 Mitochondrial maintenance & PGC-1alpha activity. Nature. 2009;458(7241):1056-60. 12. Handschin C, Rhee J, Lin J, Tarr PT, Spiegelman BM. An autoregulatory loop controls peroxisome proliferator-activated receptor gamma coactivator 1alpha expression in muscle. Proc Natl Acad Sci U S A. 2003;100(12):7111-6. 13. Mootha VK, Handschin C, Arlow D, Xie X, St Pierre J, Sihag S, Yang W, Altshuler D, Puigserver P, Patterson N, Willy PJ, Schulman IG, Heyman RA, Lander ES, Spiegelman BM. Erralpha and Gabpa/b specify PGC-1alpha-dependent oxidative phosphorylation gene expression that is altered in diabetic muscle. Proc Natl Acad Sci U S A. 2004;101(17):6570-5. 14. Stumvoll M, Fritsche A, t'Hart LM, Machann J, Thamer C, Tschritter O, Van Haeften TW, Jacob S, Dekker JM, Maassen JA, Machicao F, Schick F, Heine RJ, Häring H. The Gly482Ser variant in the peroxisome proliferator-activated receptor gamma coactivator-1 is not associated with diabetesrelated traits in non-diabetic German and Dutch populations. Exp Clin Endocrinol Diabetes. 2004;112 (5):253-7. 15. Muller YL, Bogardus C, Pedersen O, Baier L. A Gly482Ser missense mutation in the peroxisome proliferator-activated receptor gamma coactivator-1 is associated with altered lipid oxidation and early insulin secretion in Pima Indians. Diabetes. 2003; 52(3):895-8. 16. Nelson TL, Fingerlin TE, Moss L, Barmada MM, Ferrell RE, Norris JM. The peroxisome proliferator-activated receptor gamma coactivator-1 alpha gene (PGC-1alpha) is not associated with type 2 diabetes mellitus or body mass index among Hispanic and non Hispanic Whites from Colorado. Exp Clin Endocrinol Diabetes. 2007;115(4):268-75. 17. Bhat A, Koul A, Rai E, Sharma S, Dhar MK, Bamezai RN. PGC-1alpha Thr394Thr and Gly482Ser variants are significantly associated with T2DM in two North Indian populations: a replicate case-control study. Hum Genet. 2007;121(5):609-14. 18. Gemma C, Sookoian S, Alvariñas J, García SI, Quintana L, Kanevsky D, González CD, Pirola CJ. Maternal pregestational BMI is associated with methylation of the PPARGC1A promoter in newborns. Obesity. 2009;17(5):1032-9. 19. Ling C, Del Guerra S, Lupi R, Rönn T, Granhall C, Luthman H, Masiello P, Marchetti P, Groop L, Del Prato S. Epigenetic regulation of PPARGC1A in human type 2 diabetic islets and effect on insulin secretion. Diabetologia. 2008;51(4):615-22.