Background Standard 3+3 CRM Dose finding methodology One/two parameter models Flawed case studies Equivalent designs Optimal design John O’Quigley Laboratoire de Statistique Théorique et Appliquée Université Paris VI 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 1 / 58 Model for cytotoxics (3 patients) Background Standard 3+3 Pr(Tox) 1.00 CRM One/two parameter models Flawed case studies 0.75 0.50 Equivalent designs Optimal design 2-stage designs Using grades 0.25 0.00 d1 d2 d3 d4 d5 d6 d7 Dose More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 2 / 58 Model for cytotoxics (3 patients) Background Standard 3+3 Pr(Tox) 1.00 CRM One/two parameter models Flawed case studies 0.75 0.50 Equivalent designs Optimal design 2-stage designs Using grades 0.25 0.00 d1 d2 d3 d4 d5 d6 d7 Dose More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 2 / 58 Model for cytotoxics (3 patients) Background Standard 3+3 Pr(Tox) 1.00 CRM One/two parameter models Flawed case studies 0.75 0.50 Equivalent designs Optimal design 2-stage designs Using grades 0.25 0.00 d1 d2 d3 d4 d5 d6 d7 Dose More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 2 / 58 Empirical distribution for 3 patients Background Standard 3+3 Pr(Tox) 1 CRM One/two parameter models 2/3 Flawed case studies Equivalent designs 1/3 Optimal design 2-stage designs 0 Using grades d1 d2 d3 d4 d5 d6 d7 Dose More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 3 / 58 Model for cytotoxics (population) Background Standard 3+3 Pr(Tox) 1 CRM One/two parameter models 2/3 Flawed case studies Equivalent designs 1/3 Optimal design 2-stage designs 0 Using grades d1 d2 d3 d4 d5 d6 d7 Dose More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 4 / 58 Model for cytotoxics (population) Background Pr(tox.) Standard 3+3 CRM One/two parameter models Flawed case studies Target 1 0.75 0.5 Equivalent designs Optimal design 2-stage designs 0.25 0 d1 d2 d3 d4 d5 d6 d7 dose Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 5 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 1 We must do the best for the treated patient. We cannot knowingly undertreat leaving no chance for therapeutic benefit. (Smith et al (1998) J. Clin. Oncology). We can not knowingly overtreat. 2 There is no “treatment versus experimentation dilemma” (Azriel et al 2011) . 3 There is no “future benefit”, “current patient benefit” conflict. 4 We must abide by Helsinki Declaration CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 6 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 1 We must do the best for the treated patient. We cannot knowingly undertreat leaving no chance for therapeutic benefit. (Smith et al (1998) J. Clin. Oncology). We can not knowingly overtreat. 2 There is no “treatment versus experimentation dilemma” (Azriel et al 2011) . 3 There is no “future benefit”, “current patient benefit” conflict. 4 We must abide by Helsinki Declaration CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 6 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 1 We must do the best for the treated patient. We cannot knowingly undertreat leaving no chance for therapeutic benefit. (Smith et al (1998) J. Clin. Oncology). We can not knowingly overtreat. 2 There is no “treatment versus experimentation dilemma” (Azriel et al 2011) . 3 There is no “future benefit”, “current patient benefit” conflict. 4 We must abide by Helsinki Declaration CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 6 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 1 We must do the best for the treated patient. We cannot knowingly undertreat leaving no chance for therapeutic benefit. (Smith et al (1998) J. Clin. Oncology). We can not knowingly overtreat. 2 There is no “treatment versus experimentation dilemma” (Azriel et al 2011) . 3 There is no “future benefit”, “current patient benefit” conflict. 4 We must abide by Helsinki Declaration CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 6 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs 1 We do not want to “undertreat” 2 We do not want to “overtreat”, i.e. too much toxicity. 3 Use as few patients as possible (efficiency). Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 7 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs 1 We do not want to “undertreat” 2 We do not want to “overtreat”, i.e. too much toxicity. 3 Use as few patients as possible (efficiency). Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 7 / 58 Ethical considerations for a Phase I trial Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs 1 We do not want to “undertreat” 2 We do not want to “overtreat”, i.e. too much toxicity. 3 Use as few patients as possible (efficiency). Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 7 / 58 Up and Down Designs (Storer Biometrics (1989, 1993) Background Standard 3+3 1 Random walk (no memory) 2 Decision rule uses only part of data. 3 Standard design is 3+3 design + stopping rule. 4 Fails all 3 ethical criteria; CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs 1 More patients under-treated than necessary. 2 More patients over-treated than necessary. 3 Poor (inefficient) estimate of MTD. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 8 / 58 Up and Down Designs (Storer Biometrics (1989, 1993) Background Standard 3+3 1 Random walk (no memory) 2 Decision rule uses only part of data. 3 Standard design is 3+3 design + stopping rule. 4 Fails all 3 ethical criteria; CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs 1 More patients under-treated than necessary. 2 More patients over-treated than necessary. 3 Poor (inefficient) estimate of MTD. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 8 / 58 Up and Down Designs (Storer Biometrics (1989, 1993) Background Standard 3+3 1 Random walk (no memory) 2 Decision rule uses only part of data. 3 Standard design is 3+3 design + stopping rule. 4 Fails all 3 ethical criteria; CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs 1 More patients under-treated than necessary. 2 More patients over-treated than necessary. 3 Poor (inefficient) estimate of MTD. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 8 / 58 Up and Down Designs (Storer Biometrics (1989, 1993) Background Standard 3+3 1 Random walk (no memory) 2 Decision rule uses only part of data. 3 Standard design is 3+3 design + stopping rule. 4 Fails all 3 ethical criteria; CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs 1 More patients under-treated than necessary. 2 More patients over-treated than necessary. 3 Poor (inefficient) estimate of MTD. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 8 / 58 Continual Reassessment Method Background Gasparini and Eisele (A curve-free method for Phase I clinical trials. Biometrics 2000) described CRM as: Standard 3+3 CRM 1 An allocation rule to assign sequentially the incoming patients to one of the possible doses, with the intent of assigning doses ever closer to, and eventually recommending, the MTD. 2 A statistical procedure that updates the information on the probabilities of toxicity in light of the results obtained for the patients already observed One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Same idea for MCRM (Faries 1994), GCRM (Goodman 1995, Heyd and Carlin 1998), RCRM, ECRM (Moller 1995). Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 9 / 58 Continual Reassessment Method Background 1 Select target θ (usually 1/4, 1/5 or 1/3). 2 Pr(Yi = 1|dj ) = ψ(dj , a) = αj 3 Calculate Standard 3+3 CRM One/two parameter models Flawed case studies exp(a) log L(a) = Equivalent designs X yi log ψ(xi , a) + 1 X (1 − yi ) log[1 − ψ(xi , a)] 0 Optimal design 2-stage designs 4 Allocate to dose xi ∈ {d1 , ..., dk } where; Using grades More complex problems |ψ(xi , â) − θ| ≤ |ψ(dj , â) − θ| ∀dj Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 10 / 58 Continual Reassessment Method Background 1 Select target θ (usually 1/4, 1/5 or 1/3). 2 Pr(Yi = 1|dj ) = ψ(dj , a) = αj 3 Calculate Standard 3+3 CRM One/two parameter models Flawed case studies exp(a) log L(a) = Equivalent designs X yi log ψ(xi , a) + 1 X (1 − yi ) log[1 − ψ(xi , a)] 0 Optimal design 2-stage designs 4 Allocate to dose xi ∈ {d1 , ..., dk } where; Using grades More complex problems |ψ(xi , â) − θ| ≤ |ψ(dj , â) − θ| ∀dj Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 10 / 58 Continual Reassessment Method Background 1 Select target θ (usually 1/4, 1/5 or 1/3). 2 Pr(Yi = 1|dj ) = ψ(dj , a) = αj 3 Calculate Standard 3+3 CRM One/two parameter models Flawed case studies exp(a) log L(a) = Equivalent designs X yi log ψ(xi , a) + 1 X (1 − yi ) log[1 − ψ(xi , a)] 0 Optimal design 2-stage designs 4 Allocate to dose xi ∈ {d1 , ..., dk } where; Using grades More complex problems |ψ(xi , â) − θ| ≤ |ψ(dj , â) − θ| ∀dj Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 10 / 58 Continual Reassessment Method Background 1 Select target θ (usually 1/4, 1/5 or 1/3). 2 Pr(Yi = 1|dj ) = ψ(dj , a) = αj 3 Calculate Standard 3+3 CRM One/two parameter models Flawed case studies exp(a) log L(a) = Equivalent designs X yi log ψ(xi , a) + 1 X (1 − yi ) log[1 − ψ(xi , a)] 0 Optimal design 2-stage designs 4 Allocate to dose xi ∈ {d1 , ..., dk } where; Using grades More complex problems |ψ(xi , â) − θ| ≤ |ψ(dj , â) − θ| ∀dj Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 10 / 58 Continual Reassessment Method Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 11 / 58 Bayesian and likelihood estimation Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 -0.69 -0.27 -0.03 0.23 0.40 0.61 0.08 0.17 0.25 0.35 0.42 0.50 0.26 0.32 0.37 0.42 0.47 John O’Quigley (Université Paris VI) d1 d2 d3 d3 d4 d4 d3 d3 d4 d4 d4 d4 d4 d4 d4 d4 d4 0.2 0.13 0.21 0.13 0.21 0.14 0.18 0.15 0.26 0.23 0.20 0.18 0.26 0.23 0.22 0.20 0.19 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 Dose finding methodology – – – – – 0.34 0.52 0.64 0.74 0.87 0.58 0.65 0.35 0.42 0.47 0.52 0.56 d1 d2 d3 d4 d5 d4 d4 d4 d5 d5 d4 d4 d4 d4 d4 d4 d4 – – – – – 0.23 0.17 0.14 0.29 0.24 0.15 0.13 0.23 0.20 0.19 0.17 0.16 London, U.K.. 20.11.2012 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 12 / 58 Behaviour of SM (no stopping rule) and CRM Background Ri Standard 3+3 unknown probabilities at level i .04 .11 .23 .34 .42 .61 CRM One/two parameter models Optimal design 2-stage designs 6 5 5 4 4 dose Equivalent designs 6 dose Flawed case studies 3 3 2 2 1 1 Using grades 1 4 7 10 13 16 19 22 25 28 31 nb of patients 34 37 40 1 4 7 10 13 16 19 22 25 28 31 nb of patients 34 37 40 More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 13 / 58 CRM examples, no stopping rule Background MTD = level 3 Standard 3+3 MTD = level 1 CRM Equivalent designs Optimal design 2-stage designs 6 5 5 4 4 DOSES Flawed case studies 6 DOSES One/two parameter models 3 3 2 2 1 1 1 5 10 Using grades 15 20 25 PATIENT NUMBER 30 35 40 1 5 10 15 PATIENT NUMBER 20 25 30 More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 14 / 58 Potential sample paths Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 15 / 58 Model and inference (likelihood) Background Using likelihood and letting Standard 3+3 Pr(Yi = 1|Xi = dj ) = (αj )a CRM One/two parameter models then the models αi αi Flawed case studies Equivalent designs Optimal design 2-stage designs .85 .03 .89 .09 .92 .16 .95 .35 .98 .59 .10 .10 .20 .20 .30 .30 .50 .40 .70 .50 behave identically, whereas the models αi αi Using grades More complex problems Finding MSD .81 .01 .05 .05 behave differently. John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 16 / 58 Model and inference (Bayes) Background For distance measure use; Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs 1 O’Quigley, Pepe, Fisher (1990) suggest E ψ(dj , a) 2 O’Quigley, Pepe, Fisher (1990) suggest ψ(dj , E(a)) 3 Chu, Lin, Shih (2009) suggest 4 Shih (1999) suggest γ = 0.5 corresponding to median. 5 Babb, Rogatko, Zacks (1998) suggest γ = 0.75 This is known as EWOC. ψ1−γ (dj , a) Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 17 / 58 1-parameter versus 2-parameter models O’Quigley, Pepe and Fisher (1990) show that; Background 1 Standard 3+3 2 2-parameter logistic model more noisy Final recommendations less accurate CRM One/two parameter models Table: 2-param logistic (O’Quigley, Pepe, Fisher 1990) Flawed case studies Equivalent designs R(di ) 1 .06 2 .08 Dose 3 4 .12 .18 5 .40 6 .71 1-CRM 2-CRM .00 .01 .04 .11 .23 .16 .15 .19 .00 .05 Optimal design 2-stage designs Using grades More complex problems .57 .48 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 18 / 58 Background Standard 3+3 CRM One/two parameter models Flawed case studies Proba. of Tox. One parameter CRM models 1 * * 0.5 Equivalent designs Optimal design 2-stage designs * θ * * 0 Using grades * d1 d2 d3 More complex problems d4 d5 d6 Dose level Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 19 / 58 Two parameter CRM (ADEPT, BLR) Background Standard 3+3 Two parameter CRM has weaker theoretical foundation CRM One/two parameter models Flawed case studies 2CRM can be erratic, eg., first patient treated at level 1, suffers DLT, the recommendation is treat at level 6 (Shu 2008). Equivalent designs ADEPT is 2CRM, using patient benefit as metric. Optimal design BLR (Neuenschwander et al 2007) is also 2CRM 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 20 / 58 Two versus one parameter CRM models Background Standard 3+3 CRM 1 R̂j = ψ(dj , â) may be too inflexible to work well for all j. One/two parameter models 2 R̂j ≈ 3 R̂j → Rj and is fully efficient (Shen & O’Quigley, Biometrika 96 ) 4 Rj = ψ(dj , a, b) is over-parameterized, cannot identify a and b. Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades P Yij /nj at recommended level. P More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 21 / 58 Simulations: Gerke and Siedentop (2008) Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design Table: Percentage of found MTD for the 3 scenarios from Gerke and Siedentop using fixed sample size. 3 scenarios, n=23, 18, 17. 1 4.85 1.05 0.10 0.00 0.00 0.00 2 9.90 12.30 0.20 0.00 0.00 0.00 3 34.95 39.50 1.90 1.45 0.00 0.00 Dose 4 38.65 38.35 8.50 11.65 0.20 0.05 5 11.05 8.60 38.25 42.90 0.40 0.70 6 0.60 0.20 46.75 37.10 5.65 12.30 7 0.00 0.00 4.20 6.85 44.35 43.45 8 0.00 0.00 0.10 0.05 47.65 35.55 9 0.00 0.00 0.00 0.00 1.75 7.80 10 0.00 0.00 0.00 0.00 0.00 0.15 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 22 / 58 Background Standard 3+3 Table: The toxicity rate of six simulated scenarios CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades Scenario 1 2 3 4 5 6 1 0.35 0.25 0.15 0.10 0.05 0.02 2 0.45 0.35 0.25 0.15 0.10 0.05 Dose 3 4 0.55 0.70 0.45 0.55 0.35 0.45 0.25 0.35 0.15 0.25 0.10 0.15 5 0.80 0.70 0.55 0.45 0.35 0.25 6 0.95 0.80 0.70 0.55 0.45 0.35 More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 23 / 58 One/two parameter CRM models: first patients Background First 4 patients 5 3.0 First 8 patients Standard 3+3 1−parameter CRM 1−parameter CRM 2−parameter CRM (ADEPT) 2−parameter CRM (ADEPT) 2.5 CRM 0.5 1 2-stage designs 1.0 Optimal design 1.5 3 Number of toxicities Equivalent designs 2 Flawed case studies Number of toxicities 2.0 4 One/two parameter models 0 0.0 Using grades More complex problems 1 2 3 4 5 6 Scenarios 1 2 3 4 5 6 Scenarios Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 24 / 58 Novartis case study (Neuenschwander et al, Bailey and Neuenschwander 2008) Background Standard 3+3 CRM One/two parameter models Flawed case studies doses # pats 1.0 3 2.5 4 5 5 10 4 15 0 20 0 25 2 30 - 40 - 50 - # DLTs 0 0 0 0 - - 2 - - - Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 25 / 58 Logical errors in Novartis case study doses E(prior) 1.0 .07 2.5 .08 5 .09 10 .11 15 .12 20 .14 25 .16 30 .24 40 .33 50 .46 E(post) .02 .05 .09 .13 .18 .23 .28 .34 .41 .47 Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs CRM recommends decrease in 3 levels and not an increase. Optimal design CRM is coherent (Cheung 2003). 2-stage designs Bayesian methods require care. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 26 / 58 Impact of skeleton/prior when using Bayes doses BackgroundE(prior) 1.0 .07 2.5 .08 5 .09 10 .11 15 .12 20 .14 25 .16 30 .24 40 .33 50 .46 Standard 3+3 E(post) .02 .05 .09 .13 .18 .23 .28 .34 .41 .47 doses E(prior) 1.0 .00 2.5 .00 5 .00 10 .02 15 .12 20 .30 25 .50 30 .68 40 .80 50 .88 E(post) .00 .00 .01 .05 .18 .38 .57 .73 .84 .90 doses E(prior) Using grades 1.0 .00 2.5 .02 5 .12 10 .30 15 .50 20 .68 25 .80 30 .88 40 .93 50 .96 E(post) .00 .00 .01 .08 .23 .44 .62 .76 .86 .92 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 27 / 58 Curve free designs (Gasparini, Eisele 2000) 1 θ1 = 1 − R(d1 ) , Background θi = Standard 3+3 CRM One/two parameter models 2 Flawed case studies For each θi , (i = 1, . . . , k ), f (θi ) = B −1 (ai , bi )θiai −1 (1 − θi )bi −1 Equivalent designs Optimal design for parameters ai and bi and where B(a, b) is the beta function. with parameters a and b. 2-stage designs Using grades More complex problems 1 − R(di ) , i = 2, . . . , k . 1 − R(di−1 ) 3 R(di ) = 1 − θ1 θ2 ...θi 4 O’Quigley (Biometrics 2005) shows Curve free ≡ CRM. Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 28 / 58 EWOC designs (Babb, Rogatko, Zacks 1998) Background Standard 3+3 1 Iterative updating same as CRM 2 Allocate to dose level dj such that posterior probability of toxicity being greater than θ is α. BRZ choose α = 0.25 3 Chu, Lin and Shih (2009) show that, when α = 0.5, then EWOC ≡ CRM. CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 29 / 58 Simple take home message Background Standard 3+3 CRM One/two parameter models CRM, BLR, ADEPT EWOC, Curve-free Flawed case studies Equivalent designs are all essentially equivalent. Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 30 / 58 How good can any design be? Background Super-optimal designs: Standard 3+3 CRM One/two parameter models Flawed case studies 1 Include zero patients in study: recommend level 2. 2 Include 5 patients at level 3. Recommend according to table: Equivalent designs Optimal design 2-stage designs Outcome Recommendation 0/5 5 1/5 4 2/5 3 3/5 2 4/5 1 5/5 1 Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 31 / 58 Super optimality Background Super-optimality is common in the statistical literature, in particular for Bayesian designs. Standard 3+3 CRM One/two parameter models Example for combinations, using partial orderings; 1 Yin and Yuan (2009) Appl. Statist, 211 - 224, show for 4×4 combinations, copula design finds MTD 52%. 2 PO-CRM (Wages et al, Biometrics 2011 ) finds MTD in 45%. 3 When ordering is known, CRM finds MTD 48%. 4 When ordering is known Optimal Design finds MTD 49%. Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 32 / 58 Optimal design benchmark Background Subject h experiences a toxicity at d5 . Subject j a non-toxicity at level d3 . Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design Doses Observed Yhk Unobserved Yhk Observed Yjk Unobserved Yjk d1 X 0 0 0 d2 X 0 0 0 d3 X 1 0 0 d4 X 1 X 0 d5 1 1 X 0 d6 1 1 X 1 Consider; 2-stage designs Using grades More complex problems Dose Rk = Pr (Yk = 1) d1 0.05 d2 0.11 d3 0.22 d4 0.35 d5 0.45 d6 0.60 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 33 / 58 Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades Subject vj j 1 .53 2 .08 .29 3 .41 4 5 .79 6 .04 .87 7 8 .15 9 .63 10 .56 11 .32 .72 12 13 .20 .97 14 15 .52 16 .24 Frequencies More complex problems sj 6 2 4 5 1 3 6 4 3 6 4 R̂k Rk 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0.06 0.05 Toxicity at dose level 2 3 4 5 0 0 0 0 1 1 1 1 0 0 1 1 0 0 0 1 0 0 0 0 1 1 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 1 0.13 0.25 0.44 0.50 0.11 0.22 0.35 0.45 6 1 1 1 1 0 1 0 1 0 1 1 0 1 0 1 1 0.69 0.60 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 34 / 58 Summarizing results Relative performance by levels; Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design dk Rk pk (16) qk (16) 1 0.05 0.05 0.04 2 0.11 0.26 0.27 3 0.22 0.42 0.48 4 0.35 0.21 0.17 5 0.45 0.06 0.04 6 0.60 0.0 0.0 Relative performance by cumulative errors; Let α = 0.1 be % simulations where Pr (Y = 1) ∈ (0.10, 0.30). This is 0.69 for CRM and 0.74 for optimal. 2-stage designs Using grades More complex problems α pα qα 0.02 0.42 0.48 0.05 0.42 0.48 0.10 0.69 0.74 0.15 0.94 0.96 0.20 1.0 1.0 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 35 / 58 Graph of cumulative errors 1 CRM optimal Background Standard 3+3 0.8 One/two parameter models Flawed case studies Equivalent designs Optimal design Cumulative frequency CRM 0.6 0.4 0.2 2-stage designs Using grades 0 0 More complex problems 0.05 0.1 0.15 0.2 differences 0.25 0.3 0.35 0.4 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 36 / 58 Optimal .... , CRM1 .... , CRM2 .... 1 Background 0.9 Standard 3+3 0.8 CRM Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades FrØquence CumulØe 0.7 One/two parameter models 0.6 0.5 0.4 0.3 0.2 0.1 0 0 0.025 0.05 0.075 0.1 0.125 0.15 0.175 More complex problems 0.2 0.225 0.25 0.275 ecarts 0.3 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 37 / 58 Optimal .... , CRM .... , 3+3 .... 1 Background Standard 3+3 0.8 One/two parameter models Flawed case studies Equivalent designs Optimal design Cumulative Frequency CRM 0.6 0.4 0.2 2-stage designs Using grades 0 0 0.05 0.1 0.15 More complex problems 0.2 0.25 differences 0.3 0.35 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 38 / 58 Two stage designs (likelihood) Background Standard 3+3 1 Likelihood is monotone unbounded until first observed toxicity. 2 First stage is largely arbitrary. 3 Different first stage algorithms lead to different operating characteristics. Optimal design 4 First stage can incorporate information on grades. 2-stage designs 5 Two stage designs accommodate many/open number of levels. CRM One/two parameter models Flawed case studies Equivalent designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 39 / 58 Two stage designs (likelihood) Background Standard 3+3 1 Likelihood is monotone unbounded until first observed toxicity. 2 First stage is largely arbitrary. 3 Different first stage algorithms lead to different operating characteristics. Optimal design 4 First stage can incorporate information on grades. 2-stage designs 5 Two stage designs accommodate many/open number of levels. CRM One/two parameter models Flawed case studies Equivalent designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 39 / 58 Two stage designs (likelihood) Background Standard 3+3 1 Likelihood is monotone unbounded until first observed toxicity. 2 First stage is largely arbitrary. 3 Different first stage algorithms lead to different operating characteristics. Optimal design 4 First stage can incorporate information on grades. 2-stage designs 5 Two stage designs accommodate many/open number of levels. CRM One/two parameter models Flawed case studies Equivalent designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 39 / 58 Two stage designs (likelihood) Background Standard 3+3 1 Likelihood is monotone unbounded until first observed toxicity. 2 First stage is largely arbitrary. 3 Different first stage algorithms lead to different operating characteristics. Optimal design 4 First stage can incorporate information on grades. 2-stage designs 5 Two stage designs accommodate many/open number of levels. CRM One/two parameter models Flawed case studies Equivalent designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 39 / 58 Two stage designs (likelihood) Background Standard 3+3 1 Likelihood is monotone unbounded until first observed toxicity. 2 First stage is largely arbitrary. 3 Different first stage algorithms lead to different operating characteristics. Optimal design 4 First stage can incorporate information on grades. 2-stage designs 5 Two stage designs accommodate many/open number of levels. CRM One/two parameter models Flawed case studies Equivalent designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 39 / 58 Design modifications Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 1 Patients can be included in groups, eg 3 at a time. 2 Grouping can be by design. 3 Overdose control. 4 Underdose control. 5 Joint underdose/overdose control. 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 40 / 58 Design modifications Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 1 Patients can be included in groups, eg 3 at a time. 2 Grouping can be by design. 3 Overdose control. 4 Underdose control. 5 Joint underdose/overdose control. 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 40 / 58 Design modifications Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 1 Patients can be included in groups, eg 3 at a time. 2 Grouping can be by design. 3 Overdose control. 4 Underdose control. 5 Joint underdose/overdose control. 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 40 / 58 Design modifications Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 1 Patients can be included in groups, eg 3 at a time. 2 Grouping can be by design. 3 Overdose control. 4 Underdose control. 5 Joint underdose/overdose control. 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 40 / 58 Design modifications Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 1 Patients can be included in groups, eg 3 at a time. 2 Grouping can be by design. 3 Overdose control. 4 Underdose control. 5 Joint underdose/overdose control. 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 40 / 58 Some initial escalation schemes Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs # pats 3+3 CRM(2S) CRM(G) 1 d1 d1 d1 2 d1 d2 d2 3 d1 d2 d3 4 d2 d3 d3 5 d2 d3 d4 6 d2 d3 d4 7 d3 d4 d5 8 d3 d4 d5 9 d3 d4 d5 etc. etc. etc. etc. Optimal design 2-stage designs Table: Example of initial escalation stage using acceleration. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 41 / 58 Rapid early escalation using grades Background Standard 3+3 CRM One/two parameter models Flawed case studies Severity 0 1 2 3 4 Table: Toxicity “grades” (severities) for trial. Equivalent designs Optimal design 2-stage designs Using grades More complex problems Degree of Toxicity No toxicity Mild toxicity (non dose-limiting) Non-mild toxicity (non dose-limiting) Severe toxicity (non dose-limiting) Dose limiting toxicity The rule is to escalate providing S(i) is less than 2. Furthermore, once we have included 3 patients at some level then escalation to higher levels only occurs if each cohort of 3 patients does not experience dose limiting toxicity. Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 42 / 58 Rapid escalation based on grades Trial History Background 9 Standard 3+3 CRM 8 One/two parameter models 7 Dose Level Flawed case studies 6 5 4 Equivalent designs Optimal design 2-stage designs Using grades 3 2 1 1 4 7 10 13 16 Patient No 19 22 More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 43 / 58 More complex problems Background Standard 3+3 CRM One/two parameter models Two group problem (patient heterogeneity) Bridging studies Within patient escalation Flawed case studies Recording errors and non-drug related DLTs Equivalent designs Multi-drug problem, partial ordering Optimal design Graded toxicities 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 44 / 58 More complex problems Background Standard 3+3 CRM One/two parameter models Two group problem (patient heterogeneity) Bridging studies Within patient escalation Flawed case studies Recording errors and non-drug related DLTs Equivalent designs Multi-drug problem, partial ordering Optimal design Graded toxicities 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 44 / 58 More complex problems Background Standard 3+3 CRM One/two parameter models Two group problem (patient heterogeneity) Bridging studies Within patient escalation Flawed case studies Recording errors and non-drug related DLTs Equivalent designs Multi-drug problem, partial ordering Optimal design Graded toxicities 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 44 / 58 More complex problems Background Standard 3+3 CRM One/two parameter models Two group problem (patient heterogeneity) Bridging studies Within patient escalation Flawed case studies Recording errors and non-drug related DLTs Equivalent designs Multi-drug problem, partial ordering Optimal design Graded toxicities 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 44 / 58 More complex problems Background Standard 3+3 CRM One/two parameter models Two group problem (patient heterogeneity) Bridging studies Within patient escalation Flawed case studies Recording errors and non-drug related DLTs Equivalent designs Multi-drug problem, partial ordering Optimal design Graded toxicities 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 44 / 58 More complex problems Background Standard 3+3 CRM One/two parameter models Two group problem (patient heterogeneity) Bridging studies Within patient escalation Flawed case studies Recording errors and non-drug related DLTs Equivalent designs Multi-drug problem, partial ordering Optimal design Graded toxicities 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 44 / 58 Two groups in a single trial R1 R2 Background .02 .03 .19 .05 Standard 3+3 One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems .45 .21 .51 .39 .63 .50 Trial History Dose level CRM .31 .11 : toxicity d6 : non toxicity d5 G2 d4 G1 G2 G1 G2 d3 G1 d2 G1 G1 G1 d1 1 5 10 15 20 25 30 Patient number Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 45 / 58 Modification of algorithm Background 1 Standard 3+3 2 Choose level dj closest to target. Choose level dj according to some probability mechanism. CRM One/two parameter models Trial History Flawed case studies 6 Equivalent designs 8 Optimal design 6 5 dose level 7 Dose Level 2-stage designs Trial History 9 5 4 3 Using grades More complex problems Finding MSD 4 3 2 2 1 1 1 4 John O’Quigley (Université Paris VI) 7 10 13 16 Patient No 19 22 Dose finding methodology 1 3 5 7 9 11 13 15 17 Patient no London, U.K.. 20.11.2012 19 21 23 46 / 58 Within patient escalation Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades Patient 1 2 3 4 5 6 level 1 0 level 2 1 0 level 3 1 1 2 level 4 level 5 2 1 ? 3 4 (DLT) Table: Acceleration information from graded toxicities. Entries are the grades. More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 47 / 58 Phase I study of a combination Background Standard 3+3 Table: Drug combinations used in Phase 1 trial of Samarium Lexidronam and Bortezomib DLT defined by as a grade 3+ neutropenia (Berenson et al. 2009) CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Agent Sm (mCi/kg) Bortezomib (mg/m2 ) d1 0.25 1.0 Drug Combination d2 d3 d4 d5 0.5 1.0 0.25 0.5 1.0 1.0 1.3 1.3 d6 1.0 1.3 We index the models by M where M takes value Mh under the hth possible ordering Using grades More complex problems M1 : d1 → d2 → d3 → d4 → d5 → d6 M2 : d1 → d2 → d4 → d3 → d5 → d6 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 48 / 58 Set of possible orders of toxicity probabilities Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design M M1 M2 M3 M4 M5 R(d1 ) R(d1 ) R(d1 ) R(d1 ) R(d1 ) ≤ ≤ ≤ ≤ ≤ R(d2 ) R(d2 ) R(d2 ) R(d4 ) R(d4 ) ≤ ≤ ≤ ≤ ≤ Simple Order R(d3 ) ≤ R(d4 ) R(d4 ) ≤ R(d3 ) R(d4 ) ≤ R(d5 ) R(d2 ) ≤ R(d3 ) R(d2 ) ≤ R(d5 ) ≤ ≤ ≤ ≤ ≤ R(d5 ) R(d5 ) R(d3 ) R(d5 ) R(d3 ) 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 49 / 58 Model choice Likelihood Lmj (a) for model m after j patients is (proportional); Background Standard 3+3 j X CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD y` log ψm (x` , a) + `=1 j X (1 − y` ) log(1 − ψm (x` , a)) `=1 Obtain âmj Estimate probability of toxicity di via: R̂(di ) = ψm (di , âmj ) , (i = 1, . . . , k ). Given m, the dose to be given to the (j + 1) th patient, xj+1 is determined. Given Ωj , posterior model probabilities are: R∞ π(m) −∞ exp{Lmj (u)}g(u) du π(m|Ωj ) = PM R∞ m=1 π(m) −∞ exp{Lmj (u)}g(u) du In some cases the π(m|Ωj ) are only of very indirect interest, John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 50 / 58 Illustration Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design R = (0.04, 0.07, 0.20, 0.35, 0.55, 0.70). Target toxicity rate θ = 0.20. The trial will treat n = 24 patients. For each ordering, we used the power model, a ψm (di , a) = αmi ; m = 1, . . . , 5 ; i = 1, . . . , 6 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 51 / 58 Working Models Background Standard 3+3 Table: Working model for five simple orders CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades M m=1 m=2 m=3 m=4 m=5 1-2-3-4-5-6 1-2-4-3-5-6 1-2-4-5-3-6 1-4-2-3-5-6 1-4-2-5-3-6 1 0.01 0.01 0.01 0.01 0.01 2 0.07 0.07 0.07 0.20 0.20 Combinations 3 4 0.20 0.38 0.38 0.20 0.56 0.20 0.38 0.07 0.56 0.07 5 0.56 0.56 0.38 0.56 0.38 6 0.71 0.71 0.71 0.71 0.71 More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 52 / 58 Simulation results Background Standard 3+3 Dose R(di ) Conaway et al. POCRM CRM d1 0.26 0.35 0.29 0.27 d2 0.33 0.52 0.50 0.49 d3 0.51 0.11 0.16 0.23 d4 0.62 0.02 0.04 0.01 d5 0.78 0.00 0.01 0.00 d6 0.86 0.00 0.00 0.00 n 21.3 22.0 22.0 tox 8.5 8.4 7.9 R(di ) Conaway et al. POCRM CRM 0.12 0.07 0.02 0.01 0.21 0.29 0.23 0.18 0.34 0.42 0.55 0.63 0.50 0.21 0.11 0.17 0.66 0.01 0.10 0.01 0.79 0.00 0.00 0.00 25.6 26.0 25.0 9.0 10.0 7.5 R(di ) Conaway et al. POCRM CRM 0.04 0.00 0.00 0.00 0.07 0.02 0.00 0.01 0.20 0.38 0.26 0.19 0.33 0.51 0.50 0.67 0.55 0.08 0.23 0.13 0.70 0.02 0.01 0.00 28.5 29.0 28.0 8.8 10.8 8.0 R(di ) Conaway et al. POCRM CRM 0.01 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.05 0.06 0.01 0.00 0.17 0.25 0.29 0.18 0.33 0.64 0.61 0.76 0.67 0.05 0.09 0.06 29.0 29.0 28.0 7.8 9.4 6.3 R(di ) Conaway et al. POCRM CRM 0.01 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.05 0.01 0.00 0.00 0.15 0.04 0.20 0.05 0.20 0.37 0.12 0.26 0.33 0.59 0.68 0.69 26.2 27.0 27.0 5.8 6.4 4.3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 53 / 58 Most successful dose (MSD) Example in HIV; Background 1 Treatment over long period. Standard 3+3 2 Toxicity is inability to take treatment. 3 Observation window for efficacy comparable to toxicity. 4 Lack of efficacy as bad, possibly worse, than toxicity. CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Introduce the following definitions; 1 R(xj ) = Pr(Yj = 1|Xj = xj ) 2 Q(xj ) = Pr(Vj = 1|Xj = xj , Yj = 0) 3 P(di ) = Q(di ){1 − R(di )}. Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 54 / 58 Models Background Standard 3+3 CRM One/two parameter models Flawed case studies Let; R(xj ) = E(Yj |xj ) = ψ(xj , a) ; Q(xj ) = E(Vj |xj , Yj = 0) = φ(xj , b) P(xj ) = φ(xj , b){1 − ψ(xj , a)} and Q(x) = H{R(x)} Q(x) Q(x) Equivalent designs Optimal design 2-stage designs R(x) R(x) Using grades More complex problems Figure: Possible relationships for Q(x) = H{R(x)} Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 55 / 58 Compromise structure Background Standard 3+3 CRM O’Quigley, Hughes and Fenton (Biometrics 57, 1018-29) suggest; One/two parameter models 1 Choose, say, θ = 0.1 Flawed case studies 2 Use SPRT to test H0 : P ∈ (0, 0.7) versus H1 : P ∈ (0.7, 1.0) 3 If SPRT chooses H0 at di then remove levels d1 , ..., di , and, modify θ to θ + ∆. Equivalent designs Optimal design 2-stage designs Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 56 / 58 Some simulated situations Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs Using grades More complex problems Rk Qk Pk Rk Qk Pk Rk Qk Pk Rk Qk Pk d1 0.06 0.21 0.20 0.15 0.82 0.70 0.00 0.10 0.10 0.00 0.20 0.20 d2 0.15 0.82 0.70 0.30 0.71 0.50 0.05 0.32 0.30 0.00 0.30 0.30 d3 0.25 0.80 0.60 0.40 0.83 0.50 0.15 0.82 0.70 0.10 0.56 0.50 d4 0.30 0.71 0.50 0.50 0.80 0.40 0.30 0.71 0.50 0.15 0.82 0.70 Scheme 1 Scheme 2 Scheme 3 Scheme 4 Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 57 / 58 Some simulated situations Background Standard 3+3 CRM One/two parameter models Flawed case studies Equivalent designs Optimal design 2-stage designs % rec % alloc % rec % alloc % rec % alloc % rec % alloc d1 0.00 0.23 0.96 0.76 0.00 0.06 0.00 0.00 d2 0.97 0.75 0.04 0.24 0.01 0.44 0.00 0.37 d3 0.03 0.02 0.00 0.00 0.93 0.44 0.12 0.32 d4 0.00 0.00 0.00 0.00 0.06 0.06 0.87 0.31 Scheme 1 = 24.9 n Scheme 2 = 21.7 n Scheme 3 = 37.6 n Scheme 4 = 48.5 n Table: Recommendation and in-trial allocation for the 4 schemes Using grades More complex problems Finding MSD John O’Quigley (Université Paris VI) Dose finding methodology London, U.K.. 20.11.2012 58 / 58