Using a serial dilution experiment to estimate the density of organisms by Milton Wayne Loyer A thesis submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Statistics Montana State University © Copyright by Milton Wayne Loyer (1981) Abstract: The serial dilution assay is a standard microbiological method for determining the density of organisms in a solution. This paper presents alternatives to current standard serial dilution confidence interval, point estimate and design recommendations. Original exact confidence intervals are given which are narrower than those available in standard tables. Point estimates are given which have smaller mean squared error than the standard most probable number (MPN) maximum likelihood estimator. An algorithm is given which, for the techniques discussed and within certain researcher-chosen constraints, identifies the optimal design and the most efficient estimator. This paper also gives the solution to the general finite population serial dilution problem, discusses finite population analogs of the confidence interval and point estimate techniques discussed, and compares the finite and the infinite population models. The computer programs which were used to obtain the confidence intervals, point estimates and tables presented in the text are given in the Appendix. These programs, including the one for identifying the optimal design, generalize to any number of dilutions, any number of samples per dilution and any dilution factor. USING A SERIAL DILUTION EXPERIMENT TO ESTIMATE THE DENSITY OF ORGANISMS by MILTON WAYNE LOYER A thesis submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Statistics Approved: /<0sZZMJ-' HeadyMajor Department Chairman, Examining Committee Graduate Dean MONTANA STATE UNIVERSITY Bozeman, Montana March, 1981 iii ACKNOWLEDGMENT I wish to thank my thesis advisor Dr. Martin A. Hamilton for his advice and assistance throughout my graduate work. Thanks are also due to the Montana State University Research-Creativity Development Committee for funding computer work connected to the thesis and to Messiah College for assisting in the preparation of the final manuscript. I also wish to acknowledge my wife and my parents for their encouragement and support throughout my education. iv TABLE OF CONTENTS CHAPTER PAGE 1. INTRODUCTION.......................... I 2. CONFIDENCE INTERVALS ........................................ 5 2.1 2.2 2.3 2.4 2.5 Woodward's Method ...................................... DeMan's M e t h o d .......................................... Methods of Combining Independent Results ................ The Method of Minimum Expected W i d t h .................... Approximate Methods .................................... 5 9 11 15 19 3. POINT E S T I M A T E S ............................................... 22 3.1 The M P N ........................ 22 3.2 Alternative Procedures .................................. 26 ■ 3.3 Bias and MSE Comparisons .. . . ............................ 35 4. DESIGN CONSIDERATIONS ......................................... 49 4.1 The Single Dilution Experiment .......................... 4.2 A Design Algorithm for theSerial Dilution Experiment . . 5. THE' FINITE POPULATION M O D E L .......................... .. 50 53 . . 60 5.1 The General F o r m u l a .................................... 62 5.2 Point and Interval Estimation . . . . . ................ 64 6 . S U M M A R Y ....................................................... 70 FOOTNOTES......................................................... 72 A P P E N D I X ................................. .... .................74 BIBLIOGRAPHY .112 V LIST OF TABLES TABLE PAGE 1. 95% Confidence Intervals .................................... 2. 3 MPN R e s u l t s ............................................... . 2 4 3. Point E s t i m a t e s ..............................................27 4. Expected Values and MSE V a l u e s ................................ 28 5. Selected Expected Values and MSE Values ................... 36 6 . Expected Values and MSE V a l u e s ............................. 38-47 7. MPN Expected Values and MSE V a l u e s ............................ 52 8 . MSE C o m p a r i s o n s ..............................................57 9. 10. Infinite and Finite Population R e s u l t s ......................... 65Infinite and Finite Population Results ....................... 68 vi LIST OF FIGURES FIGURE PAGE 1. Distribution of Possible Sample Results .................... 2. Output for the Program of Appendix I V ...................... 55 7 vii ABSTRACT The serial dilution assay is a standard microbiological method for determining the density of organisms in a solution. This paper presents alternatives to current standard serial dilution confidence interval, point estimate and design recommendations. Original exact confidence intervals are given which are narrower than those available in standard tables. Point estimates are given which have smaller mean squared error than the standard most probable number (MPN) maximum likelihood estimator. An algorithm is given which for the techniques discussed and within certain researcher-chosen constraints, identifies the optimal design and the most efficient estimator. This paper also gives the solution to the general finite population serial dilution problem, discusses finite population analogs of the confidence interval and point estimate techniques discussed, and compares the finite and the infinite population models. The compqter programs which were used to obtain the confidence intervals, point estimates and tables presented in the text are given in the Appendix. These programs, including the one for identifying the optimal design, generalize to any number of dilutions, any number of samples per dilution and any dilution factor. I. INTRODUCTION Halvorson and Ziegler (1933a) state "the use of dilution methods ...dates back to the early days of science" and note that Pasteur, for example, was using serial dilution techniques about 1875. Typically, one seeks to estimate the number of organisms per unit volume of solution under the assumptions that (I) the organisms are randomly distributed throughout the solution and (2) each sample from the solution, when incubated in the culture medium, is certain to exhibit fertility whenever the sample contains one or more organisms. If the solution averages X organisms per unit volume and z is the dilution (multiple of the unit volume selected for analysis), then, under the Poisson probability model, P(sterile sample) = e In practice, one guards against obtaining samples which are likely to be either all sterile or all fertile by using more than one dilution. Letting equal the number of fertile samples in n_ trials at the i dilution, P(X.Fr); = (ni) (l-e"'Xzi)r (e"Xzi)ni"r . 1 . r . In'the first definitive study of the problem of estimating X using serial dilutions, McCrady (1915) described the estimate X, the value of X that maximizes the probability of obtaining the specific arrangement of fertile and sterile samples observed. z, ■ McCrady called , • X .,the "most probable number" (MPN) and presented the procedure, which today is known as maximum likelihood (ML) estimation, as Bayes a estimation with an improper uniform prior on X. To justify the procedure, he cites, among others, distinguished late nineteenth 2 century mathematician Richard L. Edgeworth who stated, "The assumption that any probability constant about which we know nothing in particular is as likely to have one value as another, is grounded upon the rough but solid experience that such constants do, as a matter of fact, as often have one value as another." For k dilutions, the likelihood function is given by (1.1) LCx1,x2 ,. . . = H(^i)(1-e ^Zi)Xi(e ^Zi)ni Xi i and the maximum likelihood estimate for X , still most commonly referred to as the MPN, is the X which solves Z(x_^z^e ^Zi)/(l-e ^Zi) = Z(n_-x^)z^, which simplifies (deMan 1977) to (1 .2) ^nizi = ^xIzV • For k>l, the solution to (1.2) must be obtained by iterative methods. Several programs (e.g., Parnow 1972) to obtain the MPN for any k, any and any n^ are readily available. While the methods of all sections of this paper generalize to any k, any z^ and any n^ (except in Chapter 5 where it is required that Zn^z/hL), the numerical examples given are for the commonly encountered case of k=3 decimal dilutions z^=(.l) i=l,2,3. with n^=3 for The 64 possible (Xi,Xa,Xg) sample results will be referred to by the codes 000,001,...,332,333. For these k, z^ and n^, the first three columns of Table I summarize the results presented and recommended by standard reference works. 3 TABLE I 95% Confidence Intervals,: .n=3, Z^=.I : re s u lt MPNa 000 001 002 003 010 011 012 013 020 021 022' 023 030 031 032 033 . 100 101 . 102 102 HO 111 112 113 120 121 122 123 130 131 132 133 200 201 202 203 210 211 212 213 220 221 •222 ‘ 223 230 231 232 233 300 301 302 303 310 311 312 313 320 321 322 323 330 331 332 333 0 .0 3 .0 6 .0 9 .0 3 .0 6 .1 9 .2 12 6 .2 9 .3 12 16 9 .4 13 16 . 19 3 .6 7 .2 'u 15 7 .3 11 15 19 11 15 20 24 16 20 24 29 9 .1 14 20 26 15 20 27 34 21 28 35 42 29 . 36 44 53 23 39 64 95 ■ 43 75 120 160 93 150 210 290 240 460 1100 Woodward^ Com bining^ In d e p e n d e n t R e s u lt s deManC 0 -9 £ 0-9 < 1 -1 7 .0 8 5 -1 3 Minimum6 E x p ected W idth 0-12 2 -1 5 0-13 < 1 -1 7 < 1 -1 6 7-19 2-10 2 -2 2 4 -1 7 1 6 -2 0 1 7 -1 7 ''' .0 8 5 -2 0 .8 7 -2 1 <1-21 2 -2 7 < 1-24 3 -2 8 26-28 < 1-25 .8 8 -2 3 3 -3 6 2-28 4 -3 4 1-3 0 . 7-35 35-35 3 -2 0 4 -3 5 6-41 5-32 1 7 -3 7 6-42 1 8 -3 2 2 -3 8 5-48 1 -4 2 5 -5 0 2 7 -5 0 <1-37 11-14 3 -5 5 9-64 36-65 5 -4 2 8-62 11-74 7-61 1 8 -7 1 5 1 -7 2 10-32 1 1 -7 7 1 9 -6 3 40-74 3 .5 -1 2 0 6 .9 -1 3 0 15 -3 8 0 < 10-130 1 0 -1 8 0 2 0-230 3 -1 3 7 1 0-175 4 2 -1 8 3 4 -1 2 0 14-69 7 .1 -2 1 0 14 -2 3 0 30 -3 8 0 1 0 -2 1 0 2 0-280 4 0 -3 5 0 7-200 21-180 15 -3 8 0 30-440 35-470 3 0 -3 8 0 5 0-500 8 0-640 1 10-790 <100-1400 100-2400 300-4800 5 -2 5 7 1 5 -3 2 0 5 1-340 1 9 5-345 1 1-456 26-594 69-659 208-687 27-1612 54->1800 115-*»1800 298-» 2 .7 - 3 6 ‘ 1 .0 - 3 6 2 .7 - 3 7 2 .8 -4 4 7-89 3 .5 -4 7 10 -1 5 0 36-1300 71-2400 150-48X10 460— ' 5 -5 0 , 7-60 ' 1 2-360 38-400 120-260 26-990 70-2000 140-4070 370-” ^A m erican P u b lic H e a lth A s a o c ia c lo n (1 9 7 0 , p ag e 101) A m erican P u b lic H e a lth A s s o c ia tio n (1 9 7 1 , p ag e 6 7 6 ); s e e s e c t i o n 2 .1 ^jdeMan (1 9 7 7 ); s e e s e c t i o n 2 .2 s e e s e c t i o n 2 .3 e s e e s e c t i o n 2 .4 ^one-sided 95% confidence interval 01 z = .001 4 This paper examines presently recommended serial dilution interval estimation (Chapter 2), point estimation (Chapter. 3) and design (Chapter 4) techniques. In each chapter, alternatives are developed and compared to the currently standard methods. In Chapter 5, the exact solution is given to the finite population serial dilution problem. 2. CONFIDENCE INTERVALS Sections 2.1-2.4 present two commonly used and two new methods for constructing exact 100(l-a)% confidence intervals. Several approximate confidence interval techniques are discussed briefly in section '2.5. The 95% confidence intervals obtained by the methods in sections 2.1-2.4 are given in the final four columns of Table I. As apparent from the discussion below, the methods of sections 2.1-2 .3 can be used to construct one-sided confidence intervals, and for these methods the endpoints given in Table I may be used as the endpoints for appropriate 97.5% one-sided confidence intervals. 2.1 Woodward's Method Perhaps the most commonly used 95% confidence intervals are those given by the American Public Health Association (1971, page 676). Prepared by Woodward (1957) and appearing in the "Woodward" column of Table I, these intervals are the accepted norm by which other procedures are often judged (e.g., Martins and Selby 1980). Woodward ranked each of the 64 possible X 1X2X 3 outcomes according to the magnitude of the MPN and then constructed 95% confidence intervals (i.e., approximate intervals, since the outcome space is discrete) by testing H q IX=Xo for selected Xq values in [0,=°). For a given X 1X2X 3 outcome. Woodward rejected H q IX=Xq if and only if that X 1X2X 3 outcome produced an MPN in the lower 2.5% or the upper 2.5% of the probability distribution of MPN's generated under Hq . The set of all Aq iS not rejected for any X 1X2X 3 outcome comprise the two-sided 95% confidence interval associated with that outcome. Figure I illustrates the Woodward method. When testing Hq :A=21 vs. H^:Af21, one obtains the distribution of MPN1s shown. Rejecting the .025 most extreme results in each tail. Woodward rejects A=21. for X 1X2X 3=OOO,001,010,100,002,Oil,020,101 in the lower tail and for X 1X2X 3=SSS,332,331,'323,330,322,313,321,312,303 in the upper tail. The Woodward■95% confidence intervals of Table I for these results (when given) should not include the value 21. This is true for all cases except XiX2X 3=IOl, which represents an error in Woodward's calculations. Nor is this the only error in Woodward's work, as deMan (1975) notes. "In the table presented by Woodward (1957)," he states, "a few mistakes were also found, but they were minor. Undoubtedly, this, table should have been given more attention than it apparently b r e c e i v e d . T h e program used to generate the probabilities for Figure I is. given in Appendix I. .. The MPN's in Figure I were obtained ' .,by Newton's method within the program of Appendix III. Two additional comments regarding Woodward's confidence intervals need to be made. First, a caveat given by Woodward but often omitted by those reproducing his tables should be repeated. For the 000 (333) result, Woodward rejects Hq :A=Aq if and only if the MPN is in the upper (lower) 5% of the. sampling distribution and presents only upper (lower) 95% confidence intervals. ,, ■ 7 FIGURE I Distribution of Possible Sample Results (arranged by magnitude of MPN ) n=3, : I Zn= .01 z = .001 A=21 '2. MPN result i- 0 0 0 '.0 0 0 9 0.00 3 .0 1 3 .0 5 3 .5 7 6.02 010 .0 0 0 6 100 I .0 1 9 7 002 .0000 6.11 011 .0000 001 .0001 6 .1 9 020 .0002 7 .2 3 101 .0 0 1 3 7 .3 6 H O 3 3 .0 1 3 8 9 .0 5 003 .0 0 0 0 9 .1 8 012 .0000 9 .1 8 200 9 .3 1 021 .0000 9 .4 4 0300000 1 0 .9 9 102 .0000 1 1 .1 8 1 1 1 ’ .0 0 0 9 1 1 .3 8 1 2 0 ] . 0 0 3 2 1 2 .2 6 013 1.0 0 0 0 1 2 .4 3 0 2 2 1.0 0 0 0 1 2 .6 1 0 3 1 1.0 0 0 0 1 4 .3 3 201 n .0 0 9 0 1 4 .6 8 1 4 .8 4 1 0 3 .0 0 0 0 1 5 .1 1 ST 112 1.0 0 0 0 1 5 .3 9 1 2 1 1.0 0 0 2 p to 1 5 .5 6 023 .0 0 0 0 1 5 .6 9 130 .0 003 O M 1 5 .7 9 032 .0 0 0 0 2. 1 8 .9 9 033 .0 0 0 0 1 9 .1 4 113 .0 0 0 0 S 1 9 .5 0 122 .0 0 0 0 1 9 .8 9 131 .0 0 0 0 1 9 .9 2 202 .0 002 I 2 0 .4 7 i 211 I .0 0 6 3 I 2 1 .0 7 220 I .0 2 3 2 2 3 .1 2 300 _____________ 2 3 .7 2 123 .0 0 0 0 2 4 .2 0 132 .0 0 0 0 2 5 .9 9 203 .0 0 0 0 2 6 .7 8 212 .0001 2 7 .6 3 221 .0 0 1 5 2 8 .5 5 230 .0 0 1 8 2 8 .6 1 133 .0 0 0 0 3 3 .6 1 213 1 .0000 3 4 .7 7 222 1.0000 3 6 .0 4 2 3 1 1.0 0 0 1 3 8 .5 0 301 i____ ) .0 2 1 5 4 2 .4 2 223 !.0 0 0 0 4 2 .7 3 310 I_____________ 4 4 .0 8 232 1.0 0 0 0 5 2 .5 7 2 3 3 LOOOO 6 3 .5 6 302 !.0 0 0 5 7 4 .8 9 3 1 1 ' | .0 151 9 3 .2 8 320 i I .0554 9 5 .3 8 303 0000 1 1 5 .2 2 312 !.0 0 0 3 1 4 9 .3 6 321 1 .0 0 3 5 1 5 8 .8 0 313 I. 0000 2 1 4 .6 6 3 2 2 i . 0001 2 3 9 . 79 330 I ] . 0043 2 9 1 .7 2 323 TOOOO 4 6 2 .1 8 331 1.0003 1 0 9 8 .9 5 332 .0 0 0 0 “ 333 i . 0000 _____ [ T .1 4 1 5 .0 9 9 2 1 .3 3 7 9 V 1 .2 3 6 9 8 Secondly, while Woodward's method provides a 95% confidence interval for each of the X 1X2X 3 possible outcomes, his 1957 table includes confidence intervals only for what he determines to-be the 22 most likely X 1X2X 3 outcomes'. The remaining 42 X 1X2X 3 outcomes he calls "improbable" and recommends that they not be used for making inferences. result 003 — In other words, there are some X 1X2X 3 outcomes (e.g ., the no organisms present in the more concentrated .1 or .01 dilutions, but organisms present in all three samples at the weakest .001 dilution) for which Woodward's method gives a 95% confidence interval in which he apparently does not have 95% confidence. The last two methods of Table I eliminate this subjectivity by inherently failing to give confidence intervals (i.e., by giving empty confidence intervals) for improbable results. A further inspection of Woodward's method reveals some serious practical flaws. Note from Figure I that ordering the X 1X2X 3 results by the magnitude of the MPN'does not yield a unimodal sampling distribution. According to most statistical inference texts (e.g., Cox' and Hinkley 1974, page 66), this means that the MPN is not an acceptable test statistic since more extreme values of the MPN do not necessarily give stronger evidence of departure from Hq . Fisher (1956, page 98) objected to a procedure of Bartlett for similar reasons since his statistic "does not increase or decrease monotonically for changes in the weight of the evidence." 9 The difficulty caused by a multi-modal sampling distribution can be seen from Figure I. Woodward's rejection region includes the result 100 for which P(X1X2X 3=IOO) = .0197 but fails to include the less likely result H O for which P(X1X2X 3=IlO) = .0138. In fact, Woodward cannot place in his rejection region any result, no matter how unlikely, which gives an MPN larger than 3.57 unless the result 100 were already in the rejection region. Woodward's intervals, then, form a "staircase" based on the magnitude of the MPN so that the lower (upper) confidence limit associated with one sample result cannot be lower (higher) than the limit associated with another sample result yielding a lower (higher) MPN.C Consequently, the width of an interval is not determined by the precision associated with the sample result, and preliminary calculations verify that the actual level of Woodward's intervals is greater than 95%. 2.2 DeMan's Method Another set of commonly used confidence intervals is given by deMan (1975) and appears in the "deMan" column of Table I. Even though deMan uses the term "confidence interval," his procedure does not meet the necessary and sufficient conditions given by Neyman (1941), the originator of the concept of confidence intervals as presently employed. In the opinion of many authors (e.g., von Mises 1942), however, this is not necessarily to deMan's detriment. DeMan does, in fact, provide the limits of the middle 95% of the likelihood 10 distribution for each X^XgXs result or, equivalently, the Bayesian interval for X under an improper uniform prior. While the posterior function f (X;xi.,x2 ,xg) is defined continuously for deMan used discrete approximations in both directions from the MEN and truncated the posterior distribution whenever an additional tail histogram area contributed less than .000005 of the cumulative total. DeMan's method, like Woodward's, provides a 95% confidence interval for each of the 64 possible XjX2X 3 results. Also like Woodward, deMan sates that "MEN tables should be restricted to results having a defined minimal probability" and gives no confidence intervals for "improbable" XjX2X 3 results. In their original articles, deMan and Woodward agree in all but two cases on what is improbable (deMan considers the result 312 improbable, but not the result 211). It is clear that each finds himself deciding which of his 95% intervals he chooses not to accept with nominal level 95 per cent. If one desires to use a Bayesian procedure, of course, he is not limited to an improper uniform prior. In general, the more specific prior information the researcher has (or is willing to assume) about X , the narrower he can make his "confidence interval." Even if the researcher begins with complete ignorance about X, however, the uniform prior may not be the appropriate prior. Box and Tiao (1973) discuss Bayesian interval estimation in general and define a 11 1'noninformalive prior," based on Fisher's information, that they recommend for the researcher with little or no prior information. 2.3 Methods of Combining Independent Results Since each of the three dilutions gives results independent of those of the other dilutions, the total serial dilution experiment yields three independent point estimates and three independent confidence intervals for X. First impressions might suggest constructing V . 95 confidence intervals Ci, Cg and Cg for each of the three dilutions and using the intersection C i H C z ^ C z as an experiment-wide 95% confidence interval. This is certainly statistically acceptable and has the advantage of permitting certain unlikely results to produce empty confidence intervals whenever Ci H C 2 ^ C 3= 0. There are, however, at least two disadvantages major enough to discourage the use of this procedure. First, the three independent confidence intervals have at most three distinct lower endpoints and three distinct upper endpoints. This means that the 64 possible XiX2X 3 results generate a maximum of 32=9 distinct non-empty confidence intervals. Certainly, there exists the possibility of different XiX2X 3 results yielding identical confidence intervals. This would not be undesirable if the minimal sufficient statistic were some function of the X^ (e.g., Y=%X_) that could assume only some number of values considerably less than 64. 12 Here, unfortunately, the minimal sufficient statistic is the ordered triple (X1,X2 ,X3) and none of the 64 possible X1X2X 3 outcomes gives the same information as any of the other outcomes. Secondly, one intuitively has more confidence in the interval associated with the strongest concentration Z 1 since it represents, in some sense, the largest sample size. Or should one have more confidence in the interval associated with the weakest concentration z 3 since it represents, in some sense, the finest scrutiny of the solution? What if two of the three intervals agree and. the third appears to be an outlier? While the weighting of estimates is usually associated with point estimation, one can't help but feel that merely intersecting three intervals obtained at three different levels of examination would be naive and inefficient. Fisher (1932) introduced a method of combining the results of independent tests using p-values,.and Lancaster (1976) gives an updated review of the procedure. Here, one combines the p-values associated with H :A=A o o experiment-wide p-value. for each of the three dilutions to obtain ah The method uses the well-known (e.g., Hogg and Craig 1970, pages 349,104 and 159) facts (i) For any continuous random variable Y with distribution function F(Y), the random variable W=F(Y) has a uniform [0 ,1] distribution. (ii) If Y is a random variable having a uniform [0,1] 13 distribution, then W=-2[In(Y)] has a chi-square distribution with 2 degrees of freedom. (iii) If Yi sY2,...,Y^. are independent random variables each having a chi-square distribution with r^ degrees of freedom, then W=YifY2+..,+Y^ has a chi-square distribution with r=r1+ r2+ . ..+r^ degrees of freedom. When the test H :X=X vs. H :X>X o o o o at the single dilution z yields m fertile samples in n trials, the associated p-value is given by (2 .1) p = Z (n)(l-e-XoZ)x (e~XoZ)n~x ^ x=m x = P(X>m|X=Xo) = I - P(X<m|X=Xq) = I - F(X) (ignoring the lack of continuity, a correction for which will be given later). Since p = I-F(X) has a uniform [0,1] distribution whenever W = F(X) has a uniform [0,1] distribution, (i), (ii) and (iii) above imply that an experiment-wide p-value for three independent dilutions can be obtained by calculating the probability that -2%[ln(p^)] is greater than a random variable having a chi-square distribution with 6 degrees of freedom. Collecting for each X iX2X 3 result the Xq 1s for which one fails to reject H :X=X o o vs. H :X>X at the a=.025 level a o (i.e., for which the p-value is greater than .025) and for which one. fails to reject H :X=X o o vs. H :X<X at the a=.025 level, one a o constructs two-sided 95% confidence intervals. 14 Rosenthal (1978) reviews several methods of combining the results of independent studies and for k=3 independent results such as those in the serial dilution problem, he recommends Fisher's method. Rosenthal does, however, remind his readers of two disadvantages inherent in the method. First, for several independent p-values just slightly lower than .50, Fisher's method might not yield an overall significant p-value when such simple tests as the sign test would. Secondly, independent trials with strongly significant results in opposite directions could cause Fisher's method to support the significance of either outcome. While it is precisely this second phenomenon that proves to be the desired advantage in the serial dilution problem by causing empty confidence intervals for improbable results, not all authors would see this as an asset. Cox and Hinkley (1974, page. 225)., for example, discuss procedures that give empty confidence intervals and say, "the assertion that [the parameter] lies in a null region is certainly false... What is the point of making assertions known to be false?" I. Lancaster (1949) gibe's a continuity correction for Fisher s ;■ i method which, according to'recent surveys (e.g., Rosenthal 1978), I others have not been able to improve upon since. Moses (1956) discusses the Lancaster-corrected Fisher technique in detail. .I Confidence intervals obtained using Fisher's technique and Lancaster's ! correction for ,continuity are given in the "Combining Independent 15 Results" column of Table I. While Woodward's method and deMan's method yield confidence intervals for all possible X iX2X 3 results (recall that those authors give intervals only for what they consider "probable" and acceptable results), the method of combining independent results described above yields only the confidence intervals given in Table I. X iX2X 3 results for which no confidence interval is given are results inconsistent with any value of Xq . The program used to obtain the "Combining Independent Results” entries in Table I is given, along with an example, in Appendix II. 2.4 The Method of Minimum Expected Width It is axiomatic that methods giving narrower confidence intervals ar;e to be preferred over competing methods (all other considerations being equal). While the combination method of section 2.3 certainly gives narrower confidence intervals than Woodward's or deMan's method whenever it yields an empty interval, Table I indicates other X iX2X 3 results (e.g., 120) for which the combination method gives the narrowest non-empty confidence interval of the three methods. This, prompts a search for yet another method which deliberately seeks to minimize the widths of the 95% confidence intervals. It will be , apparent, however, that such a method produces only two-sided intervals and does not have the ability of the Woodward, deMan or combination method to use upper or lower 95% confidence interval 16 endpoints as endpoints of corresponding 97.5% one-sided confidence intervals. The method of minimum expected width, like Woodward’s method, starts by testing H q :A=Aq vs . at the a=.05 level, considering the probability distribution of the 64 possible X 1X2X 3 results under H and rejecting H if the observed result falls within the extreme 5% of the sampling distribution. The two methods differ according to how each determines whether a particular X 1X 2X 3 result lies within the extreme 5% of all results possible under . Most textbook presentations of the minimum expected width technique are confined to continuous unimodal problems, for which the technique gives the shortest confidence interval (e.g., Guenther 1969). Mood, Graybill and Boes (1974, page 383) describe the technique for this case and contrast it with the usual equal tails method of constructing confidence intervals. Larson and Marx (1981, page 290) note that the technique, unlike the equal tails method, preserves the likelihood ratio criterion. Sterne (1954) first applied the technique in a discrete problem when he constructed 1-a^ confidence intervals for the binomial parameter p by forming rejection regions of size a<(X Hq .'P=Pq . that contained as many points as possible under Crow (1956) indicates that this technique does achieve the minimum possible expected width among all non-randomized techniques meeting the usual Neyman confidence interval definition. 17 In general, a 95% minimum expected width confidence interval may be formed as follows. For the parameter X and the statistic T having the sampling distribution f (t;X), increase r until /f(t;X )dt = .05, R o where R={T|f(t;X )<r}. H :X=X o o R then forms the rejection region for testing vs. H :XfX and the collection of X Ts for which a particular a o o value of T is not in R forms the confidence interval associated with that particular T. In Figure I, /f(t;X )dt = ZP(XiX2Xs;X =21) = .0496 R 0 R ° when r=.0138 and the rejection region R is the set of all 64 XiX2X 3 outcomes except. 100,200,210,220,300,301,310,311 and 320. Accordingly, the "Minimum Expected Width" column of Table I includes X=21 in precisely the confidence intervals associated with 100,200,210,220, . 300,301,310,311 and 320. The confidence intervals appearing in the "Minimum Expected Width" column of Table I were obtained following the procedure described above and using the program employed to construct Figure I (and given in Appendix I) to produce the sampling distributions for various X 's . XiXzX3 results for which no confidence interval is given are those results which, as with the combination method in section 2.3, were inconsistent with all values of X. In this author’s opinion, the combination method and minimum expected width method are significant improvements over currently used techniques and should be the recommended serial dilution analyses for one-sided and two-sided confidence intervals respectively. There are, however, some general 18 cautions and areas for further work associated with the method of minimum expected width of which the reader should be made aware. First, while the confidence intervals given in the "Minimum Expected Width" column of Table I are generally narrower than those in the other columns (recall that the deMan intervals, while generally wider than those of this section anyway, are not true Neyman confidence intervals at all) , there are a few specific exceptions (e.g., for XiXaX3=IOO). This reminds one that the method guarantees minimum expected width over all 64 possible X iX2X 3 results and not necessarily the minimum width confidence interval for each X iX2X 3 result individually. Secondly, the failure of the sampling distribution to be unimodal can cause the minimum expected width confidence interval to be the union of disjoint intervals. For the k, z^, n^ and a of this chapter, this occurred only once, and to two significant digits the confidence interval properly associated with the result X iX2X 3=SSO is 26 U [32,990]. Since this would not be an acceptable result to most researchers, this author recommends the procedure used in Table I of extending the confidence intervals across any such gaps from the lowest included X value to the highest included X value. Santner and Snell (1980), in the first paper applying the minimum expected width technique to a multi-modal distribution, and, hence, the first paper addressing this problem, describe an algorithm that makes adjustments 19 that guarantee continuous minimum expected width intervals. Finally, as discussed in Chapter 3, the MPN is a positively biased point estimate for A. Blyth and Hutchinson (1960) note that the minimum expected width confidence interval technique presented here is also biased and that minimum expected width unbiased • confidence intervals for discrete distributions require randomization, a technique unacceptable to most researchers. After examining the endpoints of the confidence intervals in Table I and considering the positive bias of the MPN discussed in Chapter 3, this author conjectures that the minimum expected width confidence intervals are not only generally narrower but also less biased than the other competing intervals considered. Since, however, there may exist a non-randomized confidence interval procedure with greater.expected . width but less bias than the minimum expected width technique, bias investigations of these and other methods might be appropriate. 2.5 Approximate Methods The methods of sections 2.1-2.4 use the true probabilities generated under the Poisson assumptions to provide exact confidence intervals which, by definition, are to be preferred over approximate methods advocated before the availability of advanced computing techniques. Various approximate methods proposed by such authorities as Neyman (Matuszewski, Neyman and Supinska 1935), Haldane (1939), 20 Fisher and Yates (1943), Cochran (1950), Ferguson (1958) and Finney (1978) , however, continue to enjoy widespread use and do offer useful insights into the problem. Eisenhart and Wilson (1943) adequately review the pre-computer history of the MPN X, the search for estimates of the variance of X and In(X), and approximate confidence intervals. They conclude, "With regard to further research, it seems highly desirable to construct mathematically exact charts giving .95 and .99 confidence intervals for the bacterial density for the case of several tubes at a single dilution, and for the case of one or more tubes at each of the successive dilutions." Woodward's (1957) exact tables, a direct response to the above challenge, are preceded by further warnings about the inadequacies of continuous approximations when n=3 and n=5 samples are used at each dilution. Inspection of Figure I indicates the degree of departure of the true sampling distribution of X and In(X) from any normal approximation. As a final note, one needs to be on guard against computer generated confidence intervals which, although sometimes even narrower than those of sections 2 .1-2 .4, are based on only approximate methods., Parnow (1972), for example, gives a program to determine confidence intervals based on the normal approximation to In(X) . Not only is his estimate ^ = based on asymptotic theory, but his starting estimate of oC, taken from Haldane (1939) , 21 uses the very crude approximations = I//l(A) and I(A) = -S2In(L)/BA2, where L is the likelihood function defined by equation (1.1) evaluated at the observed (X1,X2 ,X3) with A estimating A. Even r for large values of k and n^, Parnow1s method involves at least five distinct approximations. For the k<5 .<10 typically encountered - and n I- in practice, one should certainly prefer exact confidence intervals. 3. POINT ESTIMATES The MPN is precisely defined as the solution to equation (1.2). Being the ML estimate for X , the MPN is asymptotically unbiased and asymptotically fully efficient. In fact, Cochran (1950) states, "The limiting distribution of the MPN has the smallest standard deviation that can be achieved by any method of estimation... in seeking further for a more precise estimate." There is no point Because, however, the MPN is tedious to compute, there has been a steady stream of alternatives and adjustments starting with Wolman and Weaver (1917) ever since McCrady (1915) introduced the concept. In addition, modern computing techniques are allowing authors to discover just how biased the MPN really is for the small n encountered in practice. Section 3.1 examines the small sample behavior of the MPN, section 3.2 discusses alternatives and adjustments proposed in the literature as well as some original estimates, and section 3.3 compares the bias and the mean squared error (MSE) of the estimates presented. The numerical examples are, as in Chapter 2, for the commonly encountered and tabled k=3 decimal dilutions zi=.l, Z2= .01 and z 3= .001 with n I=^n2=113=3 . 3.1 The MPN Most review articles and textbooks on statistical methodology in the biological sciences (e.g., Eisenhart and Wilson 1943 and Finney 1978) begin the serial dilution problem by examining the single 23 dilution experiment for which f(X;X) = (^)(1-e ^Z)x (e ^Z)n X . As first noted by Finney (1952), Fisher's information I(A) = - E [92ln(f)/3A2] = nz^/(e^Z-l) is maximized for Az=I.59. This suggests selecting z=l.59/A, where A represents the researcher's best a pVtori guess for A, would provide the most efficient single solution design and selecting z=l.59/A as the middle dilution would provide the most efficient k=3‘ serial dilution design. Indeed, this is the current recommendation of most authorities (e.g., Finney 1978). The design of Chapter I, then, with Z 1=.!, Z2= . 01 and Z g=-OOl should be appropriate (if not optimal in some sense) for A 's near 160. Table 2 gives the expected value, variance and MSE of the MPN for A=10(10)300. As the MPN is infinite for XiXzX3=333, only the reduced sample space consisting of the remaining 63 possible X 1X 2X 3 results . -was used for all calculations. The "T" (for "Total") column gives, for each ^ , the sum of the probabilities over this restricted space. Even though some of the estimators to be considered give finite point estimates when XiXaXs=SSS, this will be the procedure throughout all of Chapter 3. Table 2 was constructed from the output of the program given in Appendix III. Inspection of Table 2 reveals several disturbing facts. First, for the k, z^ and n^ of the example, the MPN has a positive bias of about 45%. While the positive bias of the MPN is well known (e.g., Eisenhart and Wilson 1943 and Thomas and Woodward 1955), there has ■ 24 TABLE 2 MPN Results: n=3, z^=.l z^=.01 z^=.OOl X 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 T 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 .999 .999 .999 .998 .998 .997 .997 .996 .995 .995 .995 .993 .992 .990 .989 E(MPN) 13.73 29.17 43.68 57.26 70.56 84.06 ■97.95 112.28 127.01 142.06 157.34 172.77 188.26 203.74 219.14 234.40 249.49 264.35 278.96 293.28 307.32 321.04 334.43 347.50 360.25 372.66 384.74 .988 396.50 .987 .985 407.95 419.08 VAR(MPN) 165 656 1504 2720 4304 6248 8538 11208 14038 17179 20526 24034 27665 31376 35136 38912 42673 46401 50073 53677 57194 60618 63943 67161 70267 73263 76621 78919 81578 84129 MSE(MPN) 179 740 1691 3018 4727 6827 9318 12186 15408 18948 22767 26819 31059 35439 39916 44447 48992 53516 57987 62378 66665 70827 74849 78717 82422 85955 89313 92491 95490 98309 25 been very little investigation concerning the exact magnitude of the bias for small n . For k=3 decimal dilutions, however, McCarthy, Thomas and Delaney (1958) empirically estimate the bias to be 30% for n=5 samples per dilution and Salama, Koch and Tolley (1978) calculate exact biases of about 10% for n=10. In addition, Thomas (1942) and Johnson and Brown (1961) give mathematical approximations expressing the bias in the serial dilution problem as being inversely related to n. Halvorson and Ziegler (1933c) state, "Evidence has been presented in support of the thesis that when three effective dilutions are used to determine the bacterial population, the accuracy is... dependent only on the number of tubes used in each dilution." Unfortunately, neither the "Standard Methods" volumes (American Public Health Association 1966, 1967, 1970, 1971) nor current literature providing MPN tables (e.g., deMan 1975,1977) warn the researcher of the magnitude of the bias in their tabled MPN values for small n. Secondly, note that even the large bias discussed above does not significantly increase MSE(MPN) over VAR(MPN). This suggests that the MPN suffers extremely large variability, a fact long known to researchers in the field. Olson, Turbak and McFeters (1979), for example, bemoan "the large confidence intervals inherent in the MPN procedure" and Georgia (1942) even proposed that this variability be acknowledged by abandoning the MPN in favor of the "most probable range" (MPR). in addition, one standard reference (American Public 26 Health Association 1966, page 139) cautions, "It is desirable to remember that, unless a large number of portions of samples are examined, the precision of the [MPN] test is rather low." Indeed, the Rao-Cramer lower variance bound for unbiased estimators, [I(X)] 1= [Enz^/(e^Zi-l)] ^, is 10731 for A=160 and suggests that considerable improvement over the MPN is possible. Finally, notice that without exception MSE(MPN)>A2. This means that an estimator which completely ignores the experimental data and constantly guesses X=O (even when some of the samples are fertile) would, for this example, dominate the MPNl Clearly, while the MPN might possess desirable asymptotic properties, its behavior for small n calls for consideration of alternative techniques. 3.2 Alternative Procedures Table 3 gives the point estimates associated with each of the 64 possible X 1X 2X 3 results and Table 4 gives the expected value and MSE for X=IO(IO)300 for each procedure discussed in this section. The program used to generate the point estimates, expected values and MSE values for the procedures in sections 3.2.1 to 3.2.4 is given in Appendix III. While the program is given for the k, n_^ and section 3.1', it readily generalizes. of The estimates for.the procedures of section 3.2.5 were obtained as indicated in the text and their expected values and MSE values were calculated in the usual way. 27 TABLE 3 P o in t re s u lt E s ti m MPNa OOO 0 .0 0 0 OOi 3 .008 002 6.024 003 9 .0 5 0 010 3.049 O il 6.108 012 9 .1 7 7 013 12.2 5 5 020 6.194 021 9 .3 0 7 022 12.4 3 0 023 15.5 6 5 030 9 .4 4 1 031 12.611 032 15.7 9 3 033 18.9 8 6 100 3.571 101 7 .2 3 3 102 10.988 103 14:839 HO 7.357 111 11.183 112 15.109 19.1 3 6 113 120 11.384 121 15.391 122 19.504 123 23.718 130 • 15.684 131 1 9 .886 132 24.198 133 28.611 200 9 .178 201 1 4 .327 202 1 9 .9 2 0 203 2 5 .990 210 1 4 .689 211 20.474 212 26. 781 213 33.608 220 2 1 .065 221 27.632 222 3 4 .771 . 42.421 223 230 2 8 .551 231 3 6 .036 232 4 4 .081 233 52.571 23.116 300 301 3 8 .500 302 63.558 303 9 5 .376 310 4 2 .729 311 74.085 312 115.215 313 158.79 7 320 9 3 .2 8 0 321 1 4 9.357 322 214.657 291.724 323 330 239.790 331 462.183 332 1098.950 333 v> a t e s : Acb 0 .0 0 2.3 0 4 .6 1 6 .9 2 2 .3 3 4 .6 7 7 .0 2 9 .3 7 4.7 4 7.12 9 .5 0 11 .9 0 7.22 9.6 4 1 2 .0 8 1 4 .5 2 2.7 3 5.5 3 8 .4 0 1 1 .3 5 5.63 8 .5 5 1 1 .55 1 4 .63 8 .7 0 1 1 .77 1 4 .91 18.14 1 1 .99 15.21 1 8 .5 0 2 1 .88 7.0 2 1 0 .9 6 1 5 .2 3 1 9 .87 1 1 .2 3 1 5 .66 20.48 2 5 .70 1 6 .1 1 21.13 26.59 32.44 2 1 .83 2 7 .56 33 .7 1 4 0 .2 0 1 7 .6 8 29.44 4 8 .6 0 72.93 32.67 5 7 .26 8 8 .1 0 121.42 71.33 114.21 164.14 223.07 183.36 353.41 640.32 to n = 3 , V Z 1= . V 0 .0 0 0 .0 0 0 3 .5 0 3.008 8 .5 8 6 .024 1 7 .3 5 9 .0 5 0 3 .5 0 3 .049 8 .5 8 6 .1 0 8 1 7 .3 5 9 .1 7 6 3 6 .2 3 1 2 .254 8 .5 8 6 .195 1 7 .3 5 9 .3 0 7 3 8 .2 3 1 2 .4 3 0 8 7 .4 8 1 5 .5 6 2 1 7 .3 5 9.4 4 4 3 8 .2 3 1 2 .6 1 3 8 7 .4 8 1 5 .7 9 3 1 8 0 .2 3 1 8 .9 8 3 3 .5 0 3 .5 9 0 8 .5 0 7.1 9 6 1 7 .3 5 1 0 .8 1 7 38.2 3 1 4 .454 8 .5 8 7.339 1 7 .3 5 1 1 .034 38.2 3 1 4 .7 4 5 87.4 8 1 8 .4 7 3 1 7 .3 5 1 1 .2 6 4 38.2 3 1 5 .0 5 5 8 7 .4 8 1 8 .8 6 3 1 8 0 .2 3 22.689 38.2 3 1 5 .3 8 5 8 7 .4 8 1 9 .2 7 8 1 8 0 .2 3 2 3 .192 426 .7 2 27.124 8 .5 8 9 .5 0 3 1 7 .3 5 14.3 0 9 3 8 .2 3 1 9 .1 5 1 8 7 .4 8 24.031 1 7 .3 5 1 4 .8 2 3 38.23 1 9 .8 4 5 8 7 .4 8 24.909 180 .2 3 3 0 .0 1 5 38.2 3 2 0 .620 8 7.48 2 5 .8 9 0 180 .2 3 31.2 0 8 4 2 6.72 36.575 8 7 .4 8 2 6 .9 9 8 180 .2 3 32.5 5 6 4 2 6.72 38.169 1098.66 4 3 .8 4 0 1 7 .3 5 28.6 1 8 3 8.23 ' 38.749 8 7.48 4 9 .2 1 2 1 8 0.23 6 0 .0 3 0 3 8.23 4 5 .7 0 6 8 7 .4 8 58.4 1 7 180.23 71.750 4 2 6 .7 2 8 5 .7 7 5 8 7.48 75.993 1 8 0 .2 3 9 4 .9 1 6 4 2 6.72 115.659 1098.66 138.633 1 8 0.23 1 8 9 .8 3 2 4 2 6.72 271.244 1098.66 438.397 «» Cu .0 1 1 z_ = .0 0 1 Z2 = V V V 1 .4 0 0 .0 0 0 3 .02 2.09 9 6 .51 5 .97 18 1 4 .0 2 6 .8 5 30 3 .0 2 2 .2 0 5 5 .9 8 6 .51 14 1 4 .0 2 6 .8 5 23 3 0 .2 1 1 2 .3 35 6.51 5.99 10 1 4 .0 2 1 2 .1 19 3 0 .2 1 28 1 2 .3 6 5 .1 0 1 5 .1 39 1 4 .0 2 1 2 .1 17 3 0.21 26 1 2 .3 6 5 .1 0 1 5 .1 34 1 5 .1 1 4 0.24 45 2 3 .0 2 3 .94 6 .5 1 6 .0 3 15 1 2 .1 1 4 .0 2 28 3 0 .2 1 1 5 .1 44 6.44 6 .5 1 10 1 2 .1 1 4 .0 2 23 30.2 1 . 1 5 .1 35 6 5 .1 0 1 5 .1 51 1 4 .0 2 1 2 .2 17 30.2 1 1 5 .1 29 6 5 .1 0 1 5 .1 41 56 140 .2 4 2 7 .8 1 5 .1 26 30.2 1 1 5 .1 38 6 5 .1 0 2 7.8 49 1 4 0.24 65 302.14 2 8 .0 9 .2 2 6 6 .5 1 1 4 .0 2 24 1 2 .4 15.1 43 30.21 67 6 5 .1 0 2 7 .8 16 1 4 .0 2 13.7 1 5 .1 36 3 0.21 6 5 .1 0 55 27.8 2 8 .0 80 1 4 0.24 26 1 5 .5 30.21 46 6 5 .1 0 27.9 65 140.24 2 8 .0 302.14. 29.5 90 6 5 .3 0 41 2 8 .0 140.24 2 8 .0 61 3 0 2.14 60.9 79 6 5 0.95 60.9 105 15 1 4 .0 2 2 0 .6 59 30.21 28.7 6 1 .0 113 6 5 .1 0 187 140.24 124 4 2 .1 40 3 0 .2 1 118 6 3 .3 0 64.8 190 140.24 124 152 291 302.14 6 5 .1 0 84 9 3.4 196 138 140.24 3 0 2 .lt 155 305 466 294 650.95 207 140 .2 4 211 632 447 302 .1 4 M 3 650 .9 5 1058 1402.43 >1800 >1800 ^ th e MPN; soe s u c ti o n 3 .1 th e MPN w ith Thoiiuis1 c o r r e c t i o n to r b i a s ; s e e s e c t i o n 3 .2 .1 ^ F i s h e r ’ s e s ti m a t e ; s e e s e c t io n J . 2 . 2 Thom as1 e s ti m a t e ; s e e s e c t io n 3 .2 .3 Lth e Johnson'-Brown Spearm an e s ti m a t e ; s e e s e c t i o n 3 .2 .4 ^ th e e s ti m a t e from W oodward's C.T. m ethod; s e e s e c t i o n 3 .2 .5 !=Che e s ti m a t e from th e co m b in atio n C . I . m ethod; s e e s e c t io n 3 .2 .5 . TABLE 4 Expected Values and MSE Values: X T 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 1 80 190 2 00 210 2 20 230 2 40 2 50 2 60 270 280 2 90 300 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 .9 9 9 .999 .999 .998 .9 9 8 .997 .997 .996 .995 .995 .994 .993 .992 .9 9 0 .9 8 9 .988 .9 8 7 .985 E(A )* 1 3 .7 29.2 4 3 .7 57.3 7 0 .6 8 4 .1 9 8 .0 112 .3 1 2 7 .0 142 .1 157 .3 1 7 2 .8 188 .3 203. 7 219.1 234.4 24.9.5 264.4 2 7 9.0 2 9 3.3 307.3 321 .0 334.4 347.5 360.3 372. 7 384.7 396 .5 4 0 8 .0 419 .1 ECy= 1 0 .5 1 2 .9 2 7 .0 2 2 .3 3 3 .4 4 0 .5 4 3 .8 53.3 5 4 .0 65.9 7 8 .6 6 4 .3 7 4.9 9 1 .7 1 0 5 .2 85.9 9 7 .1 11 8 .9 1 0 8 .6 13 2 .9 1 2 0 .3 14 7 .1 1 3 2 .1 1 6 1 .4 1 4 4 .0 175 .7 1 5 5 .8 1 9 0 .0 1 6 7 .6 ' 20 4 .3 17 9 .2 218.4 19 0 .8 2 3 2.4 2 0 2.1 2 4 6.2 213 .3 2 5 9.8 224.3 2 7 3.2 235 .0 286.4 2 4 5.5 299 .3 311.9 2 5 5.7 3 2 4 .2 265.7 2 7 5.5 3 3 6.3 348 .1 2 8 5 .0 2 9 4.2 3 5 9 .7 303 .2 370.9 3 1 1.9 3 8 1.9 3 9 2 .6 3 2 0 .5 n=3, z^=.l z^^.Ol Z^=-OOl A f E(AT ) d E ( I g ) = E(A1 ) E ( A 2 ) 8 MSE(A) MSE(Ac ) MSE(Af ) MSE(At ) MSE(Ag ) MSE(A1 ) MSE(A2 ) 1 4 .9 3 0 .2 4 2 .3 5 2 .1 6 1 .0 6 9 .6 7 8 .2 86.9 9 5 .6 104 .4 1 1 3 .2 1 2 1 .8 1 3 0 .4 1 3 8 .7 1 4 6 .8 1 5 4 .7 -" 162 .4 169 .8 176 .9 183 .7 1 9 0 .2 1 9 6 .5 202 .5 208.3 213 .8 2 1 9.1 2 2 4.1 228.9 23 3 .5 237.9 1 0 .3 2 1 .2 3 1 .4 4 0 .9 5 0 .3 5 9 .7 69.3 79.1 8 9 .0 9 8 .9 108 .9 11 8 .9 1 2 8 .8 1 3 8 .5 1 4 8 .1 1 5 7 t6 1 6 6 .8 1 7 5 .8 1 8 4 .6 1 9 3 .2 201 .6 20 9 .7 217 .6 225 .2 23 2 .6 2 3 9.9 24 6 .8 253 .6 26 0 .2 266 .6 1 3 .1 2 7 .6 4 1 .4 54.3 6 6 .8 79.4 9 2 .2 105 .4 118.9 1 3 2 .8 1 4 6 .8 161 .1 175 .5 1 8 9.9 204.2 218 .6 232 .8 246 .8 260.7 2 7 4.4 28 7 .8 3 0 0.9 3 1 3 .8 326.4 33 8 .8 3 5 0 .8 36 2 .5 37 4 .0 38 5 .1 39% .0 1 1 .6 2 6 .6 4 1 .6 5 6 .3 70.9 8 6 .0 1 0 1 .8 1 1 8 .3 1 3 5 .5 1 5 3 .4 171 .9 1 9 0 .8 210 .1 229 .6 2 4 9.2 2 6 8.9 288 .5 30 8 .0 3 2 7 .4 34 6 .5 365 .3 3 8 3 .8 4 0 2 .0 4 1 9.9 4 3 7 .3 4 5 4 .4 4 7 1 .1 4 8 7 .3 503 .2 5 1 8 .7 1 79 7 40 1691 3018 4727 6827 9318 12186 15408 18948 22767 26819 3 1 059 35439 399 1 6 44447 48992 53516 57987 62378 66665 70827 74849 787 1 7 82422 85955 ■89313 92491 95490 98309 ^ t h e MPN; s e e s e c t i o n 3 . 1 t h e MPN w i t h T h o m a s ' c o r r e c t i o n f o r b i a s ; s e e s e c t i o n 3 . 2 . 1 ^ F is h e r 's e s tim a te ; see s e c tio n 3 .2 .2 T hom as' e s t i m a t e ; s e e s e c t i o n 3 . 2 . 3 - t h e Johnson-B row n Spearm an e s t i m a t e ; s e e s e c t i o n 3 . 2 . 4 t h e e s t i m a t e f r o m W o o d w a r d 's C . I . m e t h o d ; s e e s e c t i o n 3 . 2 . 5 ^ th e e s t i m a t e from t h e c o m b in a tio n C . I . m ethod; s e e s e c t i o n 3 . 2 . 5 97 389 8 91 1605 2532 3671 5015 6550 8259 10119 12107 14199 16369 18595 20852 23121 25382 27620 29821 .3 1 9 7 2 34065 36093 38049 39930 43 733 43459 45108 46681 48179 49607 155 6 58 1490 2633 4109 5947 8164 10763 13732 17047 20676 24579 28713 33032 37492 42049 46662 51294 55910 60481 649 7 9 69382 7 3 671 77831 81849 85716 89423 92967 96344 99553 196 521 875 1302 1819 2413 3058 3728 4399 5051 5671 6247 6775 7252 7681 8065 8412 8727 9020 9301 9579 9864 10167 10496 10862 11273 11739 12267 12864 13539 86 ' 3 44 759 1317 2010 2828 3758 4787 5897 7073 8299 9560 10842 12134 13424 14704 15968 17211 18430 19621 20785 21922 23033 24120 25186 26234 27269 28293 29311 30328 157 656 1465 2565 3983 5746 7870 10354 13185 16334 19769 23447 27325 31359 35504 39716 43957 48190 52383 56507 60538 64454 68240 718 8 2 7 5 369 78693 81851 8 4 839 87656 90302 173 832 2057 3917 6514 9939 14248 19459 25552 32477 40159 48508 57425 66804 76 542 86538 96695 106927 117152 127299 137306 147118 156691 165984 174968 183618 191913 199842 207392 214560 29 3.2.1 Bias Corrections In general, the bias of an estimator X is a function of the true parameter value and given by b (X) = E(X)-X. The positive bias of the MPN is well known and was noted for the numerical example of this paper in section 3.1. Thomas and Woodward (1955) compared MPN estimates to "exact" plate counts obtained by collecting organisms as the samples passed through a membrane filter (ME). "A considerable part of the disparity between MF and MPN values," they conclude, "may be attributed to the fact that mathematically considered, the MPN tends to overestimate the true density; on the average, MPN values are greater than the true density." McCarthy et al. (1958) made ten replicate n=5 MPN determinations and also used "exact" plate counts for their true X's.^ Their empirical estimate was that E(MPN) = 1.29X. Thomas (1955) uses a log-normal approximation to estimate E(MPN) 6*805/r^ and recommends the multiplicative bias correction e *®05/n^ Not being able to discover a better correction factor, this author recommends the Thomas adjustment for any k and z^. Such bias corrected values for the example of this paper are given in the X^. columns of Tables 3 and 4. In a deliberate attempt to develop an estimator with less bias ■ than the MPN, Salama et al. (1978) use expansions to obtain a X for A which E(X) = X+0(l/n2). ' ' Unfortunately, their k=3 dilution numerical 30 example uses middle dilution Z2=-OOl, which suggests their design would be appropriate for X 1s near 1600, while their bias and MSE calculations cover A=25(25)100(50)200(100)1200. Chapter 4 discusses the problems associated with X's outside the optimal range of the experimental design. Limited comparisons this author made for the Salama et al. design, however, indicate that their rather complicated estimator does not perform significantly better than the much simpler MPN with Thomas' bias correction. Further, subsequent sections will indicate that other non-MPN alternatives achieve even better results than does the Thomas bias-corrected MPN. 3.2.2 The Fisher Estimate Fisher (1922) proposes an estimator based on W=E(n.-X.), the total number of sterile responses. Since each dilution represents ah independent experiment, E(W) = En_P(X/=0) = En_e ^Z± and the X that solves W = En^e ^Zi would be an estimator both reasonable and relatively simple to compute. Fisher showed his estimator to be 87.71% efficient in the sense that for large n, the variance of the MPN (which is asymptotically fully efficient) is 87.71% that of hisestimator. Values of his estimator, designated X^ in Tables 3 and 4* for the example of this paper were obtained by Newton's method using, the program of Appendix III. Fisher and Yates (1943) provide A additional discussion and tables for obtaining A . ■r for n trials at each 31 of k>4 two-fold, four-fold and decimal dilutions. 3.2.3 The Thomas Estimate Thomas (1942) gives the estimate (n^-X^)z_^] [Zn_z^], which is the geometric mean of the estimates obtained using e""^Z = I-Az and e Az = l/eAz = 1/(1+Az) in equation (1.2). For X 1X2X 3=IlO and the n and z^ of Table 3, for example, Thomas' estimate is A 2/iZ( .233) (.333) = 7.339. = Thomas recommends his pre-computer estimator for its remarkable ability to approximate the MFN (which must be found iteratively), as seen by comparing the MPN and A^ columns of Table 3. Apparently unknown to Thomas, however, his A also enjoys considerably less variance than the MPN and deviates from the MPN so as to effect a significant reduction in bias. A The net result, as shown in Table 4, is that A1 ^ is the estimator, for the example of this paper, with by far the smallest MSE for values between 40 and 300. In fact, for A=160, A^ approaches the Rao- Cramer lower variance bound [1+b'(A)]2/I(A) for estimators of its bias. Empirically estimating b '(A=IbO) from Table 4 to be [-7.6-(-3.2)]/[170-150] = -.22, one calculates the Rao-Cramer lower bound to be 6479, to which VAR(A^) = 8037 favorably compares. Finally, while Thomas gives A^Z/EX^ as an approximate standard error for his estimator, he recognizes that the distribution of the estimator follows no tabled distribution and suggests no confidence 32 interval procedure.. 3.2.4 The Johnson-Brown Estimate Johnson and Brown (1961) develop an estimator based on the Spearman (1908) technique which, like Fisher's estimator, uses only ■ the total number of fertile responses and is also 87.71% efficient. Their analysis, which requires n_=n and’Z^=ZjI for i=l,2,...,k, produces the estimate (3.1) Ag = {2n/[2n+ln(d)ln(2)]}e~Y“ln(zi)+Cln(d)][(SXi/n)_*5], where 2n/[2n+ln(d)ln(2)] is a multiplicative bias correction, y=.57722 is Euler's constant and d is commonly called the dilution factor. The Johnson-Brown Spearman estimator enjoys both practical use (e.g., Masover, Benson and Hayflick 1974) and further discussion (e.g., Church and Cobb 1975) in the literature. In fact, Cornell (1965) states, "The work of Johnson and Brown prompted several investigations which are summarized here." Cornell and Speckman (1967) discuss and compare by simulation several procedures, including Johnson and Brown's, for estimating (for different values of z) the parameter A in the model with expectation 1-e “Az . Finally, Mantel (1967) discusses arithmetic (as opposed to the usual logarithmic) and arbitrary spacing of the z^'s. Identified as A , the Johnson-Brown Spearman estimator performs b quite well for the example of Tables 3 and 4. Despite the fact that 33 it ignores the pattern of the X^'s and, consequently, is not based on the minimal sufficient statistic, it is second in MSE only to Thomas' of section 3.2.3. 3.2.5 Estimates derived from Confidence Intervals Typical mathematical statistics texts (e.g., Bickel and Doksum 1977, page 155) note that 1-a confidence intervals must include the entire parameter space when a=0 and, in general, decrease their coverage of the parameter space as a, the probability of error, ’ increases. P. ' As a increases toward 1.00, the confidence interval decreases toward the empty set and, as illustrated by the combination method and tfre minimum expected width method of Chapter 2, may achieve the empty, set even before a increases to .05. ' This suggests that increasing a until the 1-a confidence interval decreases to a single , I point in the parameter space (i.e., finding the smallest non-empty confidence interval associated with a particular sample result) would. be a reasonable point estimation procedure. This is equivalent to : finding the point contained in every non-empty confidence interval., Applying this procedure to each of the true confidence interval techniques of Chapter 2 (i.e., the Woodward method, the.combination method and the minimum expected width method) yields three additional • .■'' competitive point estimates for X. e ' . ■ Figure I gave the distribution of possible sample results ■ ; ' :V 34 arranged by magnitude of the MPN and illustrated Woodward's technique for obtaining confidence intervals; As a increas.es toward 1.00 in the test of hypothesis, the only sample result for which one fails to reject :X=Xq is the median sample result. Although the discrete nature of the distribution leads to a range of X values, a unique X can be obtained for each X iXaX3 sample result by finding the Xq associated with the distribution for which that X iXaX3 is the exact median in the sense that the sum of all P(X*X*X*|X=Xq) for MPN(X*X*X*) < MPN(X1X2X 3) plus one half P(X1X 2X 3IX=Xq) is exactly .5000. These values were calculated, for each X 1X2X 3 sample result and are designated X 1 in Tables 3 and 4. The point estimate associated with confidence intervals obtained by the combination method is the Xq for which the p-value for the alternative H :X<X equals the p-value for the alternative H :X>X . a o a o The smallest non-empty confidence interval occurs for an a equal to twice that common p-value. The sample output accompanying Appendix II indicates that for X 1X2X 3=SOl this occurs at X=59. These values were caluclated for each X 1X2X 3 sample result and are designated X in Tables 3 and 4. The procedure for determining the point estimate associated with the minimum expected width method for obtaining confidence intervals is well-defined but extremely tedious. For a given X 3X2X 3 result, one must find the largest p-value for testing H :X=X , and the X at which 35 that p-value occurs is the desired point estimate. It is conjectured that this procedure leads to the MPN, as this author has found such to be the case for every X jX2X 3 examined. For' the result XiXaXg=MO, for example, Figure I indicates that the p-value for testing H q :A=21 is .1290. A check of similar figures gives a p-value of .1091 for testing H :A=20 and a p-value of .1257 for testing H :A=22. The MPN o o for X 1X2X 3=220 is 21. 3.3 Bias and MSE Comparisons Recall that both Woodward and deMan cautioned against certain X X X 12 3 results that "are not mentioned in the table and are always unacceptable" (deMan 1975). While Table 4 was constructed under the obvious restriction of excluding X jX2X 3=SSI, one might be more interested in results. a table constructed excluding all "unacceptable" Table 5 gives selected expected values and MSE values over the severely truncated sample space consisting of only those 18 X jX2X 3 results having non-empty minimum expected width confidence intervals. Note that the "T" values are naturally somewhat (but, perhaps surprisingly, not significantly) smaller than those of Table 4 and that the expected values and MSE values are essentially unchanged. Since additional truncation of the sample space appears not to affect the "rankings" of the estimators, subsequent comparisons will continue to use the sample space obtained by eliminating only the X JX2X 3=nJn2n 3 TABLE 5 Selected Expected Values and MSE Values: n=3, Z 1=.! Z^=-Ol Z3= .001 Truncated Sample Space: only those 18 X 1X2X 3 results with non-empty minimum expected , width confidence intervals X 10 50 100 150 T .979 .992 .992 200 .991 .990 250 300 .987 .982 E(X)* E (ic )b E(Ig)C E(X1)d ECX^)^ MSE(X) M S E ( X ) 13.8 70.6 142.2 219.5 293.6 360.4 419.1 10.5 54.0 108.7 167.8 224.5 275.6 320.5 10.1 49.9 98.5 147.6 192.6 231.9 265.8 13.1 66.8 132.8 204.7 275,0 339.4 396.6 11.4 70.6 153.1 249.4 346.9 437.8 519.2 182 4733 19008 40048 62549 82635 98583 MSE(Xg) M S E ( X ) MSE(X2) 159 172 98 84 2535 10150 20910 32050 41845 49768 1984 3993 6493 6995 13241 19351 24910 30114 16449 35752 56814 75680 90591 32635 77019 127955 175675 215255 *the MPN; see section 3.1 bthe MPN with Thomas' correction for bias; see section 3.2.1 Johnson-Brown Spearman estimate; see section 3.2.4 dthe dthe estimate from Woodward's C. I. method; see section 3.2.5 ethe estimate from the combination C.I. method ; see section 3 .2.5 37 result. Furthermore, since the estimators A 1 and A2 are tedious to compute and did not perform well in the example of this paper, they will not be included in further comparisons. As noted in section 3.2, Thomas' A1 ^ is without question the preferred estimator for the example of Table 4. There is no guarantee Zn that some other estimator, however, would not perform better than A^ for other or n^ values. Table 6 compares the expected values and the MSE values for the estimators of the program in Appendix III (i.e. , the MPN, ^ ^ and for n=3,5,10 and for k=3 two-fold, four-fold and decimal dilutions (i.e. , for dilution factors d=2,4,10) centered at Z2=-Ol. Each of these nine experimental designs, which cover virtually all k=3 serial dilution settings found in the literature, should be appropriate for A=160 and the comparisons will be made, as in Table 4, for A=IO(IO)300. The MSE values of Table 6 follow a definite pattern illustrated by Tables 6.1-6.3, which vary the dilution factor while maintaining n=3 samples per dilution. For dilution factor d=10 (Table 6.1), A performs best as measured by MSE. enjoys the smallest MSB. the superior estimator. For d=4 (Table 6.2), however, Ag And for d=2 (Table 6.3), A^ appears to be , As n increases, each estimator, as expected, performs better than it did for the previous n. For any single dilution factor, however, the "rankings" of the estimators do not change as n increases. 38 TABLE 6 Expected Values and MSE Values Ic=3 dilutions with middle dilution Z^=-Ol. n = number of samples per dilution d = the dilution factor X = the MPN; see section 3.1 A = the MPN with Thomas' correction for bias; see section 3.2.1 Ap= Fisher's estimate; see section 3.2.2 Ap= Thomas' estimate; see section 3.2.3 Ag= the Johnson-Brown Spearman estimate; see section 3.2.4 Tables 6.1 - 6.9 vary n and d as indicated below. d 10 4 A, T 6.1 6.4 6.7 6.2 6.5 6.8 6.3 6.6 6.9 4 .— — i---- n 3 5 10 TABLE 6.1 n = 3 d =10 A 10 20 30 40 50 60 70 80 90 100 as CO T 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 1 .0 0 0 n o 1.000 120 1.000 130 . .999 140 .999 150 .999 160 .998 170 .998 180 .997 190 .997 200 .996 210 .995 220 .995 230 .994 240 .993 250 .992 260 .990 270 i 989 280 .988 290 .987 300 .985 E(Ap) E(At ) E(Ag) MSE(A) 12.92 13. 73 • 1 0 .5 0 22.31 ■ 27.03 29.17 40.48 43.68 33.40 57.26 4 3 .7 8 53.26 70.56 53.96 65.87 84.06 64.27 78.64 74.90 9 7 .9 5 91.74 112.28 8 5 .8 5 105.17 9 7 .1 2 118.91 127.01 142.06 108.63 132.90 157.34 120.31 147.07 172.77 132.11 161.35 188.26 143.96 175.68 203.74 155.79 190.00 219.14 167.57 204.26 234.40 179.24 218.40 249.49 190.77 232.40 264.35 202.13 246.23 278.96 213.30 259;84 293.28 224.26 273.23 307.32 234.99 286.38 321.04 245.48 299.27 334.43 255. 73. 311.89 3 47.50 265.72 324.24 360.25 275:46 '3 3 6 .3 2 372.66 284.95 348.12 384.74 294.19 359.65 396.50 303.19 370.91 407.95 311.94 381.91 4 1 9 .0 8 320.45 392.64 14.85 1 0 .2 7 21.17 31.36 4 0 .9 1 5 0 .2 8 59.71 6 9 .3 0 79.07 88.97 9 8 .9 4 1 08.92 1 18.88 1 28.76 179 740 1691 3018 4727 6827 9318 12186 15408 18948 22767 26819 31059 35439 39916 44447 48992 53516 57987 E(A) E ftcJ 3 0 .2 4 4 2 .3 0 52.12 60.98 69.57 78.18 86.87 9 5 .6 3 104.42 113.17 121.83 130.36 138.70 146.83 1 5 4 .7 3 162.37 169.75 176.85 1 83.68 190.24 196.52 202.53 208.: 29 213 . 79 219.06 224.09 228.90 233.51 237.91 138.51 148.12 1 57.55 166.79 175.82 184.63 1 9 3 .2 0 201.55 209.67 2 17.55 225.21 232.63 239.85 246.84 253.63 260.22 266.62 62378 66665 70827 74849 78717 82422 85955 89313 92491 95490 98309 MSE(Xc ) 97 389 891 1605 2532 3671 5015 6550 8259 10119 12107 14199 16369 18595 20852 23121 25382 27620 29821 31972 34065 36093 38049 39930 41733 43459' 45108 46681 48179 49607 MSE(Xf ) 155 658 1490 2633 4109 5947 8164 10763 13732 17047 20676 24579 28713 33032 37492 42049 46662 51294 55910 60481 64979 69382 73671 77831 81849 85716 89423 92967 96344 99553 MSE(A^) 196 521 875. 1302 1819 2413 3058 3728 4399 5051 5671 6247 6775 7252 7681 8065 8412 8727 9020 9301 9579 9864 10167 10496 10862 11273 11739 12267 12864 13539 MSE(Xg ) 86 344 759 1317 2010 2828 3758 4787 5897 7073 8299 9560 10842 12134 13424 14704 15968 17211. 18430 19621 20785 21922 23033 24120 25186 26234 27269 28293 29311 30328 TABLE 6.2 n = 3 d = 4 o X T 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 1.000 1.000 1.000 1.000 1.000 1.000 1.000 .999 .998 .997 .996 .994 .992 .989 .986 .982 .977 .972 .967 .961 .954 .947 .939 .931 .922 .913 .904 .894 .884 .874 E(X) E(Xc) E(Xf) E(Xt) 11.54 23.70 36.40 49.46 62.74 76.07 89.37 102.55 115.56 128.36 140.92 153.23 165.25 176.97 188.37 199.43 210.15 220.50 230.49 240.11 249.36 258.24 266.75 274.90 282.71 290.17 297.29 304.10 310.60 316.80 8.82 18.12 27.83 37.82 47.97 58.17 68.34 78.41 88.36 98.15 107.76 117.17 126.36 135.32 144.04 152.50 160.69 168.61 176.25 183.60 190.67 197.46 203.97 210.21 216.17 221.88 227.33 232.53 237.50 242.24 11.37 23.13 35.26 47.64 60.18 72.77 85.34 97.84 110.20 122.41 134.42 146.19 157.71 168.94 179.85 190.44 200.67 210.55 220.06 229.20 237.97 246.37 254.42 262.11 269.46 276.47 283.17 289.56 295.65 301.46 11.75 24.42 37.67 51.10 64.42 77.46 90.13 102.41 114.30 125.80 136.93 147.70 158.-11 168.17 177.89 187.26 196.28 204.95 213.28 221.27 228.91 236.23 243.22 249.90 256.27 262.34 268.13 273.64 278.89 283.89 E(Xs) MSE(X) 116 12.65 20.68 337 29.42 708 1264 38.37 47.26 2019 55.92 2963 64.28 4068 72.32 5297 6608 80.04 7959 87.43 94.50 9311 101.27 10631 107.74 11890 113.92 13065 14139 119.81 125.42 15097 130.76 15933 135.84 16641 17222 140.66 17678 145.24 18015 149.57 153.68 182.39 18359 157.57 161.26 18387 18333 164.75 168.05 18209 18027 171.17 17800 174.14 176.94 ' 17540 179.60 17259 MSE(Xc) MSE(Xf) MSE(Xt) MSE(Xg) 68 192 395 691 1089 1584 2162 '2802 3484 4186 4890 5578 6239 6862 7441 7974 8460 8900 9300 9664 10000 10317 10622 10926 11238 11568 ' 11926 12321 12764 13262 109 311 654 1172 1878 2764 3805 4965 6205 7486 8769 10024 11221 12340 13364 14282 15087 15775 16348 16810 17166 1742517597 17691 17720 17695 17629 17534 17422 ■ 17304 127 376 763 1287 1933 ■2680 3500 4362 5239 6103 6934 7712 8424 9059 9610 10075 10454 10750 10967 11112 11194 11222 11207 11159 11090 11012 10935 10872 10832 10826 54 156 322 539 794 1077 1378 1691 2012 2336 2665 2999 3344 3702 4082 4490 4935 5424 5967 6572 -7249 8006 8852 9793 10839 11995 13270 14668 16197 17860 TABLE 6.3 n = 3 d = 2 A T 10 1.000 20 1.000 30 1.000 40 1.000 50 1.000 60 .999 70 .999 80 .997 90 .994 100 .990 HO .984 120 .976 130 .967 140 .955 150 .941 160 .925 170 .907 180 .888 190 .867 200 .846 210 .823 220 .799 230 .775 240 .750 250 .725 260 .700 270 .675 280 .650 290 .625 300 .601 E(A) 10.87 21.90 33.12 44.53 56.15 67.94 79.84 91.72 103.48 114.98 126.12 136.80 146.96 156.55 165.56 173.98 181.82 189.11 195.88 202.14 207.94 213.31 218.27 222.87 227.13 231.08 234.74 238.13 241.29 244.22 E(Xc) E(Af) E(At) 8.32 10.84 10.93 21.80 16.75 22.14 25.32 . 32.90 33.69 44.18 45.66 34.05 55.63 58.07 42.94 67.20 70.92 51.95 61.05 78.84 84.12 90.43 97.57 70.14 79.13 101.85 111.09 87.92 112.97 124.52 96.44 123.69 137.70 104,61 133.92 150.49 112.37 143.61 162.79 119.71 152.71 174".52" 126.59 161.21 185.62 133.03 169.12 196.09 139.03 176.46 205.91 144.61 183.23 215.10 149.78 189.49 223.68 154.57 195.25 231.66 159.00 200.56 239.10 163.11 205.44 246.01 166.90 209.94 252.43 170.42 214.08 258.41 173.68 217.89 26.3.96 176.69 221.40 269.13 179.49 2.24.64 273.94 182.09 227.63 278.42 184.50 230.39 282.60 186.74 232.94 286.49 E(Xs) MSE(A) MSE(Ac) MSE(Af). MSE(At) MSE(Ag) 76 23.58 126 177 29.06 289 3.09 501 34.68 478 778 40.33 688 1129 45.93 937 1556 51.37 1219 2044 56.61 ■ 1519 61.59 2569 1824 66.26 3099 2120 3601 70.61 2399 74.62 4049 2657 4422 78.30 2895 4709 81.66 3120 84.70 4906 3340 5017 87.47 3567 89.96 5053 • 3816 5026 92.22 4100 94.26 4953 4433 4850 96.10 4830 4735 97.77 4626 5303 99.28 5865 4540 100.64. 4493' 6527 101.88 ' 7301 4500. 103.01 4575 . 8194 104.03 9216 4731 104.97 10375 105.82 4979 5330 ’ 11678 106.60 13130 107:31 .. '5794 14738 6380 107.97 129 124 306 284 555 490 908 759 1392 1100 2022 1512 2790 1980 3666 2478 4603 2973 5548 3437 6451 3841 7268 4169 7967 4413 8528 4572 8940 4654 9206 4670 9331 4636 9330 4569 9217 4488 9013 4413 8737 4361 8409 4349 8047 4394 4510 . 7673 7303 4713 ' 5013 . 6954 6642 5423 5952 6381 6185 6610 6066 7405 214 153 143 176 249 360 512 712 968 1289 1689 2181 2777 3489 4331 5311 6439 7723 9170 10786 12576 14545 16696 -19032 21556 24270 27176 30275 33569 37059 TABLE 6.4 n = 5 'd =10 A 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 T E(A) E(Ap) E(At) E(Ag) 1.000 11.83 11.54 10.07 1.000 25.25 21.50 24.03 1.000 38.18 32.50 . 36.13 1.000 50.02 42.58 47.55 61.29 52.18 58.68 1.000 72.52 1.000 61.73 69.84 1.000 83.99 71.50 81.23 1.000 95.85 81.59 92.88 1.000 108.10 92.03 104.80 1.000 120.74 102.78 116.97 1.000 133.72 113.83 129.36 1.000 146.99 125.13 141.93 1.000 160.50 136.63 154.66 1.000 174.20 148.30 167.50 1.000 188.05 160.08 180.43 1.000 201.99 171.96 193.43 1.000 216.00 183.88 206.46 1.000 230.03 195.82 219.50 1.000 244.04 207.75 232.54 1.000 258.02 219.65 245.54 1.000 271.93 231.49 258.50 1.000 285.75 243.26 271.40 1.000 299'.46 254.93 284.22 1.000 313.06 266.50 296.96 1.000 326.51 277.96 309.61 1.000 339.83 289.29 322.16 .999 352.99 300.49 334.61 .999 365.99 311.56 346.95 .999 378.83 322.49 359.18 .999 391.51 333.29 371.30 12.59 26.93 38.62 47.55 55.04 62.02 68.95 76.01 83.26 90.71 98.31 106.04 113.84 l'21.6g" 129.47 137.21 144.86 152.39 159.76 166.97 174.00 180.83 187.46 193.89 200.12 206.14 211.97 217.59 223.03 228.29 9 .9 6 20. 78 30.79 40.03 4 9 .0 3 58.12 67.44 77.01 86.81 9 6 .7 7 106.85 1 17.00 127.16 1 3 7 .3 0 ' 147.37 1 57.36 167.23 176.97 186.57 196.02 205.30 214.42 223.37 232.15 240.77 249.23 257.52 265.67 273.66 281.51 E<ic) MSE(A) MSE(Ac ) MSE(Af ) 64 270 598 1031 1587 2288 3151 4191 5418 6840 8462 10283 12303 14518 16921 19503 22255 25165 28222 31412 34724 38145 41661 45261 48933 52664 56446 60266 64116 67986 44 178 391 681 1063 1547 2144 . 2858 3693 4653 5739 6951 8286 9742 11315 12998 ■ 14787 16673 18651 20711 22847 25051 27316 29635 32000 34406 36845 39312 41902 44309 58 258 590 1019 1546 2188 2964 3894 4996 6287 7778 9478 11392 13520 15860 18406 21150 24082 27189 30460 33880 37435 41111 44895 48772 52729 56754 60834 64957 69113 MSE(At ) MSE(Ag ) 42 82 165 254 361 366 632 459 980 598 1404 812. 1901 1106 2465, 1471 3092 1893 3776 2359 4512 2853 5296 3362 6123 3877 6989 4387 7891 4887 8825 5375 9789 5850 10780 6312 11796 6766 7216 ■ 12834 13895 7668 14975 8128 16075 8603 17192 9102 18327 9631 • 19478 10197 20645 10810 21828 11474 23026 12197 24240 12985 TABLE 6.5 n = 5 d = 4 m A T 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 190 200 210 220 230 240 250 260 270 280 290 300 .999 .999 .999 .998 .997 .997 .995 .994 .992 .991 .988 .986 .983 .980 .976 .973 .968 E(A) 10.82 21.94 33.39 45.09 56.95 68.88 80.82 92.75 104.65 116.54 128.44 140.37 152.34 164.35 176.38 188.44 200.50 212.53 224.51 236.40 248.19 259.83 271.31 282.61 293.69 304.55 315.17 325.53 335.63 345.46 E(Af) E(Xt) 9.21 10.76 21.73 18.68 28.42 ■ 32.90 44.23 38.38 48.48 55.67 67.14 58.64 78.63 68.80 90.13 78.95 89.08 101.65 99.21 113.21 109.34 124.81 119*. 50 136.46 129.68 148.17 139.91 159.92 150.16 171.69 160.42 183.48 170.68 195.26 180.93 206.99 191.12 218.66 201.25 230.22 211.28 241.67 221.19 252.97 230.97 264.10 240.58 275.03 250.02 285.76 259.26 296.26 268.30 306.53 277.12 316.55 285.72 326.32 294.09 335.83 10.92 E»c> 22.40 34.35 46.53 58.65 70.53 82.09 93.32 104.27 114.97 125.50 135.90 1.46. 2L. 156.44 166.62 176.75 186.81 196.81 206.71 216.50 226.17 235.70 245.06 254.24 263.24 272.02 280.60 288.95 297.07 304.96 E«s> 12.76 20.61 29.26 38.20 47.13 55.87 64.37 72.62 80.63 88.40 95.97 103.34 110.51 117.51 124.32 130.95 137.39 143.64 149.70 155.56 161.23 166.70 171.97 177.04 181.93 186.62 191.13 195.45 199.60 ■ 203.58 MSE(A) MSE(Ac) MSE(Af) MSE(At) MSE(Ag) 41 108 211 357 554 807 1121 ' 1500 1946 2562 3047 3699 4412 5180 5994 8968 6844 10252 7717 11579 8604 12929 9491 14286 10369 15631 11227 16948 12055 182.20 19434 • 12847 13597 20577 14298 21639 14950 22613 15549 23492 16096 24273 16592 24953 17040 25532 56 150 299 515 810 1191 1662 2230 2899 3670 4544 5519 6587 7741 55 146 291 • 506 800 1181 1653 2220 2886 3652 4520 5487 6548 7693 8913 10192 11515 12865 14225 15578 16907 18197 . 19434 20607 21706 22723 23652 24490 25235 25886 59 167 335 559 831 1147 1505 1907 2358 2860 3413 4017 4666 5355 6075 6817 7570 8325 9071 9798 10498 11164 11789 12369 12902 13384 13818 14203 14542 14838 33 84 176 299 448 620 813 1027 1260 1512 1783 2072 2379 2705 3051 3418 3809 4227 4675 5157 5679 6245 6862 7533 8267 ■ 9068 9943 10898 11939 13072 TABLE 6.6 n = 5 d =.2 X T E(X) 10 20. 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 1.000 1.000 1.000' 1.000 1.000 1.000 1.000 1.000 1.000 1.000 .999 .998 .997 .994 .991 .987 .981 .974 .966 .956 .944 .931 .916 .901 '.884 .865 .846 10.49 21.07 31.72 42.48 53.35 64.35 75.48 86.76 2 80 290 300 9 8 .1 7 109.70 121.32 132.96 144.55 156.04 167.32 178.35 189.04 199.35 209.24 218.69 227.67 236.17 244.21 251.79 258.92 265.62 271.90 .8 2 6 277.80 .805 283.33 .784 288.50 E(Xc ) E(Xp) E(Xt) 8.93 17.93 27.01 36.17 45.42 54.78 64.26 73.86 83.57 93.39 103.28 113.18 123*06 132.83 142.44 151.82 160.93 169.71 178.13 186.17 193.81 201.05 207.90 214.35 220.42 226.12 231.47 236.49 241.19 245.60 10.48 21.02 31.64 42.34 53.13 64.03 75.05 86.20 97.46 108.82 120.23 131.65 143.01 154.23 165.23 175.96 186.33 196.32 205.87 214.96 223.58 231.73 239.41 246.62 253.39 259.73 265.66 271.21 276.38 281.22 10.52 21.20 32.08. 43.20 54.60 66.33 78.41 90.87 103.73 116.96 130.54 144.40 158.45 1-721 59186.70 200.67 214.41 227.82 240.82 253.36 265i39 276.89 287.85 298.25 308.11 317.43 326.23 334.53 342.35 349.71 E(Xs ) MSE(X) 69 154 - 258 386 546 743 988 1288 1648 2068 2541 3055 3589 4123 8 8 .4 8 4636 91.89 5106 95.05 5518 97.96 5860 100.64 6126 103.09 105.34 6314 6427 107.40 6471 109.29 6456 111.Ol 6392 112.5& 6292 114.02 ' 6171 115.34 6042 116.55 5920 117.65 5818 118.66 5750 119.59 24.06 29.48 35.08 40.74 46.37 51.90 57.28 62.47 67.44 72.17 76.65 80.86 84.80 MSE(Xc) MSE(Xf) MSE(Xt) MSE(Xg) 51 115 193 290 408 552 727 938 1187 1474 1794 2138 2496 2853 3199 3523 - 3818 4081 4312 4514 4694 . 4859 5021 . 5189 5378 5597 5861 6180. 6566 7030 68 153 256 385 545 ■ 744 992 1294 1657 2079 2551 3060 3585 4105 4599 5047 5434 5749 5989 6153 6246 6275 6251 6187 6098 5997 5899 5820 5774 5774 • 215 70 131 159 97 275 ■ 104 428 152 630 239 901 369 1260 5.46 1734 776 2342 1066 3099 1425 ..4007 1860 5053 2381 6211 2999 7444 3723 8709 9962 4564 5530 11160 6631 12267 ' 7875 13251 9271 14092 10824 14775 15293 . 12542 14430 15645 1649315837 18734 15876 21158 15775 23767 15549 26564 15212 29552 14783 32731 14277 TABLE 6.7 n =10 d =10 A 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 . T 1.000 1.000 1.000 1.000 1 .0 0 0 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 E(A) E<V E(Ap) 10.75 9 .9 1 20.66 22.40 34.24 31.59 4 5 .3 6 • 41.85 55.82 5 1 .5 0 60.93 66.03 70.40 76.30 80.04 86.75 97.42 89.89 108.32 99.95 119.44 110.20 130.74 120.62 142.21 131.21 153.84 141.94 165.61 152.80 177.50 163.77 1 89.50 174.85 201.60 186.01 213.77 197.23 225.99 208.51 238.26 219.83 250.54 231.16 262.83 242.50 275.10 253.82 287.34 265.12 299.54 276.38 311.69 287.58 323.77 298.73 335.78 309.81 347.71 320.82 10.68 21.93 33.10 43.77 54.16 64.51 74.99 85.61 96.39 107.31 118.35 129.50 140.74 152.07 163.48 174.95 186.47 198.03 209.61 221.21 232.82 224.41 255.98 267.53 279.04 290.51 301.94 313.31 324.63 335.90 E(Ap) E (J s ) 9 .8 0 20.64 30.65 39.74 48.51 5 7 .3 6 . 66.47 75.88 85.57 95.49 88.33 105.57 94.75 115.76 -101.32 126.01 108.01 136.27 114.82 146.50 121.70 156.65 128.62 166.72 135.57 176.67 142.50 186.48 149.38 196.14 156.21 205.65 162.94 215.00 169.55 224.18 176.04' 233;19 182.39 242.05 188.58 250.74 194.61 259.28 200.48 267.67 206.18 275 .9 2 ' 211.70 284.03 ■ 11.17 24.09 35.85 44.88 52.01 5 8 .2 3 64.14 70.01 75.97 82.07 MSE(A) MSE(Ac ) MSE(Ap ) 20 89 213 16 71 168 292 444 626 841 1090 1374 1698 2066 2482 2952 3480 4067 4716 5427 6199 7031 7922 8869 9869 10919 12017 13161 14347 15573 16839 18142 19482 20 89 221 392 591 817 1073 1363 1695 2075 2512 3013 3584 4232 .4961 5773 6672 7657 368 552 771 1028 1326 1670 2064 2516 3031 3615 4275 5012 5829 6727 7706 8763 9897 11103 12379 13721 15124 16586 18102 19669 21285 22947 24652 8729 9886 11125 12444 13841 15312 16853 18461 20133 21866 23656 25503 MSE(At ) ' MSE(Ag ) 26 111 174 187 199 251 356 516 731 997 1310 1666 2058 2483 2933 3404 3892 4394 4907 5432 5968 6517 7084 7671 8284 8928 9610 10336 11112 11945 18 . 72 154 269 421 612 838 1097 1386 1702 2042 2405 2787 3188 3606 4038 4486 4947 5422 5911 6414 6931 7464 8012 8578 9163 9767 10393 11040 11712 TABLE 6.8 n =10 d = 4 IO X T 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 .999 .999 .999 E(X) 10.38 20.88 31.52 42.30 53.19 64.14 75.11 86.04 96.94 107.79 118.62 129.45 140.28 151.16 162.08 173.06 184.11 195.23 206.43 217.70 229.04 240.45 251.91 263.42 274.97 286.54 298.14 309.75 321.35 332.94 E(Xci) MSE(X) 12.90 10.43 10.36 9.58 20.63 21.17 20.81 19.27 32.22 29.23 31.36 29.09 38.17 43.49 41.99 39.03 54.78 47.13 52.68 49.08 65.90 55.93 63.39 59.18 76.72 64.50 69.30 74.09 72.82 87.20 84.79 79.39 97.33 80.91 89.44 95.47 88.78 99.46 106.15 107.15 96.45 109.45 116.84 116.74 119.43 127.56 126.14 103.96 129/43 138.32 135.41 111.29 139.46 149.13 144 .-61• 118.48 149.54 159.99 153.76 125.51 159.67 170.90 162.91 132.39 169.87 181.87 172.06 139.13 180.13 192.89 181.23 145.72 190.47 203.97 190.44 152.17 200.87 215.10 199.67 158.47 211.33 226.28 208.94 164.62 221.85 237.50 218.24 170.63 232.42 248.76 227.57 176.49 243.04 260.05 236.93 182.21 253.70 271.37 246.30 187.78 264.38 282.71 255.69 193.21 275.08 294.06 265-08 198.50 285.79 305.42 274.48 203.65 296.50 316.77 283.86 208.66 307.19 328.11 293.24 213.54 24 62 117 194 299 434 598 793 1018 1275 1566 1893 2259 2665 3116 3615 4163 4764 5421 6135 6907 7739 8630 9579 10584 11643 12750 13903 15094 ' 16317 E(Ic) E(Xf) E(Xt) MSE(Xn) MSE(Xt) MSE(Xrp) MSE(Xc) 21 52 98 162 247 355 487 644 826 1034 1270 1536 1833 2163 2529 2932 3374 3858 4385 4956 5573 6235 6944 7697 8493 9331 10206 11115 12055 13019 24 . 62 118 200 312 456 631 839 1078 1350 1656 1997 2377 2798 3264 3778 4343 4963 5640 6376 7173 8031 8951 9932 10971 12065 13210 14402 15635 16902 25 67 ' 131 219 327 448 577 712 856 1012 1185 1379 1596 1841 2114 2418 2753 3121 5321 3956 4424 4926 5464 6036 6642 7282 7955 8658 9391 10151 20 39 82 142 215 302 403 518 648 795 959 1143 1346 1570 1817 2089 2388 2717 3077 3472 3905 4378 4896 5460 6075 6744 7471 8258 9110 10029 TABLE 6.9 n =10 d = 2 <1- X T 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 .999 .999 .998 .997 .995 .993 .990 .986 .982 .976 .970 .962 .953 E(X) E(Xc) 9.45 10.24 18.92 20.51 30.82 28.43 37.98 41.17 51.56 47.58 62.01 57.22 72.51 66.91 83.08 76.65 93.70 86.46 104.40 96.33 115.17 106.26 126.02 116-.27 136.95 126.36 147.96 136.52 159.06 146.76 170.24 157.07 181.49 167.45 192.79 177.88 204.11 188.33 215.44 198.77 226.72 209.19 237.93 219.52 249.00 229.75 259.92 239.81 270.62 249.69 281.07 259.33 291.24 268.72 301.10 277.81 310.63 286.60 319.80 295.06 E(Xf) E(Xt) 10.25 10.23 20.49 20.59 31.05 ' 30.78 41.11 41.67 51.48 52.47 63.46 61.89 74.68 72.35 86.13 82.86 97.83 93.43 104.06 109.79 114.76 122.03 125.52 134.55 136.36 14.7.39, 147.28 160.54 158.27 174.04 169.34 187.88 180.46 202.07 191.64 216.59 202.84 231.44 214.02 246.56 225.16 261.91 236.22 277.43 247.14 293.05 257.89 308.69 268.42 324.28 278.70 339.74 288.69 354.99 298.36 369.98 307.69 384.64 316.66 398.93 E(Xs) 24.45 29.84 35.41 41.07 46.72 52.29 57.73 62.99 68.05 72.88 77.48 81.84 85.97 89.87 ' 93.55 97.01 100.27 103.33 106.20 108.89 111.41 113.76 115.95 117.99 119.89 121.66 123.29 124.81 126.22 ■ 127.52 MSE(X) 32 71 117 172 236 314 405 513 641 791 969 1178 1423 1708 2036 2410 2830 3291 3787 4309 4844 5380 5902 6396 6850 7252 7595 7874 8085 8230 MSE(Xc) MSE(Xf) MSE(Xt) MSE(Xg) 28 61 101 149 205 271 349 ‘ 440 546 671 816 986 1183 1412 1674 1971 2303 2666 3057 3466 3886 4307 4717 5107 5469 5796 6083 6329 6532 6697 32 71 117 173 239 319 414 527 661 819 1006 1226 1482 1780 2121 2508 2940 3412 3917 4445 4984 5520 6039 6526 6969 7358 7687 7949 8144 ■ 8272 32 72 122 185 263 363 489 647 847 1099 1415 1811 2308 2925 3688 4616 5729 7037 8544 10241 12109 14120 16239 18423 20628 22809 24923 26930 28795 30490 217 117 64 52 79 146 255 410 618 885 1220 1629 2120' 2702 3381 4166 5063 6081 7224 8502 9919 11482 . 13197 . 15070 17106 19311 21688 24241 26976 29894 48 While it may be disappointing that no single estimator performs best across all dilutions, it should not be surprising. As the dilution factor decreases to I (d=l is equivalent to using the single dilution z=.01 for all 3n=9 samples), the Fisher estimator approaches the MPN and the Johnson-Brown Spearman estimator approaches the constant value A = e ^ In Cz1) = e ^ ln(.01) _ 5 5 3 5 . As the b dilution factor increases, it can be shown algebraically that the Thomas estimator shrinks and the Johnson-Brown estimator Xg grows. In short, the dilution factor affects each estimator in a particular manner and it seems, in general, that A "high" dilution factors and A C performs best at factors, X^ performs best at "intermediate" dilution performs best at "low" dilution factors. The choice of the dilution factor, however, moves one into the area of design •considerations. Chapter 4 will examine current design recommendations, design suggestions in light of Table 6, and the final selection of an estimator. 4. DESIGN CONSIDERATIONS Early serial dilution investigations (e.g., Fisher 1922) suggest that most researchers of the day simply used large numbers of dilutions over a range wide enough to be certain of obtaining at least one dilution for which some but not all of the samples were fertile. Matuszewski et al. (1935) noted that "the most accurate predictions are obtained" when between 59% and 66% of the total number of samples are fertile and recommended trying to select dilutions accordingly. Fisher and Yates (1943) advocated that the "two-fold dilution series should be used, with correspondingly fewer [samples] at each level, in preference to a four-fold or ten-fold series covering the same range." Stevens (1958) proposed, a test to determine whether suspicious results (e.g., X 1X2X 3X 4X 5=SOSOS for n/=3 and z^=(.5)i) are suitable for further analysis. Most current methods books recommend using k=3 decimal dilutions with n=3 or n=5 samples per dilution and that even when more than three dilutions are used to be certain of avoiding either all fertile or all sterile results, "the results from only three of these are used in computing the MPN" (American Public Health Association 1971). The more statistical works, however, echo Finney's design statements that (I) "If N, the total number of samples is fixed, the ideal allocation would be to use all [samples] at the dilution giving 1.59 organisms per sample" (Finney 1978, page 436) and (2) for serial dilutions, "The dilution factor should be as small as practicable; 2 and 4 are 50 definitely preferable to 10" (Finney 1978, page 437) . In this chapter, it is established that the above present recommendations are not necessarily correct. As in Chapter 3, the discussion commences with a consideration of the single dilution experiment (section 4.1). Finally, a workable algorithm is given for determining, under certain researcher-chosen constraints, an efficient serial dilution design (section 4.2). 4.1 The Single Dilution Experiment Ever since Finney (1952) first noted that Fisher's information I(X) for the single dilution problem was maximized for Xz=I.59, statements like (I) in section 4.1 have abounded in the literature (Mantel 1975). Unfortunately, Xz=I.59 is not optimal for the small values of n encountered in practice. Before Finney solved the single dilution problem asymptotically, Halvorson and Ziegler (1933b) set out "to show how [X], as well as the number of tubes, influences the accuracy of the results." Using the coefficient of variation as their measure of accuracy, they note that, "An examination of this table and graph shows that the point of maximum accuracy varies with the number of tubes. With 10 tubes, the maximum accuracy is obtained when 70% of the tubes show growth [i.e., for Xz=I.2], but with 100 tubes, the maximum accuracy is obtained when 78% of the tubes show growth [i.e., for Xz=I.5]." While their 51 conclusion, "Theoretically, the maximum accuracy is obtained with a bacterial population of approximately 1.2 to 1.5 organisms per [sample], this range shifting toward the higher values as the number of tubes is increased," fails to identify the exact asymptotic bound as 1.59, it is unfortunate that their small sample work has been largely ignored. A further consideration discussed by neither Finney nor Halvorson and Ziegler is the effect of the MPN's sizable positive bias when MSE and not variance is used to judge precision. f Table 7 gives expected •values and MSE values for the single dilution design using all n=9 samples at either z=.008, z=.010 (Finney's optimal design for A=160) or z=.012. While the varying degree of truncation caused by eliminating the result for which all samples were fertile makes comparisons across dilutions difficult, note that MSE(A) near A=160 is actually smallest for z=.012 (i.e ., for Az>l.59). It should be noted that the figures in Table 7 indicate that VAR(A|A=160, z=.012) < VAR(A|A=160, z =.010) < VAR(A|A=160, z =.008), which seems to contradict the previously mentioned Halvorson and Ziegler result. tions The latter's work, however, uses binomial approxima­ without actually considering each of the n+1 possible sample results. Because Table 7 eliminates the result for which all samples were fertile, Halvorson and Ziegler's conclusions cannot be directly compared with those of this paper. At any rate, simply choosing 52 TABLE 7 MPN Expected Values and MSE Values for the Single Dilution: n=9 z=.008 X 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 T E(X) z=.010 MSE(X) 165 10.63 1.000 21.33. • 353 1.000 1.000 32.10 ' 567 1.000 42.97 813 53.92 1094 1.000 1.000 64.96 1412 1765 1.000 76.07 87.20 . 2141 .999 2527 .998 98.28 .995 109.26 • 2904 .992 120.03 3254 3559 .987 130.51 3806 .980 140.63 3989 .971 150.33 4105 .960 159.55 4157 .947 168.27 4153 .931 176.46 4106 .912 184.12 .892 191.26 4029 3937 .869 197.88 3849 .844 204.02 3781 .817 209.68 3749 .789 214.91 3770 .760 219.72 '3859 .730 224.15 4031 .699 228.22 .688 231.96 4299 4674 .637 235.40 5169 .606 238.56 5792 .575 241.45 T 1.000 1.000 1.000 1.000 1.000 .999 .998 .995 .991 .984 .974 .960 .943 .922 .897 .869 .837 .803 .767 .730 .691 .652 .614 .575 .537 .501 .465 .431 .399 .368 z=.012 E(X) MSE(X) 10.64 21.37 32.19 43.14 54.19 65.31 76.42 87.41 98.14 108.50 118.36 127.64 136.29 144.28 151.62 158.30 164.38 169.88 174.85 179.32 183.35 186.98 190.23 193.16 195.79 198.16 200.29 202.20 203.92 205.47 134 292 479 700 958 1248 1556 ■ 1859 2134 2362 ■ 2527 2627 2663 2646 2592 2520 2451 2406 2405 2470 2616 2862 3221 3707 4331 5103 6032 • 7125 8389 9830 T E(X) 1.000 10.65 21.40 1.000 1.000 32.29 43.31 1.000 54.42 .999 65.52 .998 76.45 .994 87.01 .987 97.02 .976 .960 106.37 .939 114.95 .912 122.75 .880 129.75 .844 136.01 .803 141.57 .760 146.48 .715 150.82 .668 154.64 .621 158.01 .575 160.97 .530 163.57 .486 165.86 .445 167.88 .405 169.66 .368 171.22 .334 172.60 .302 173.82 .273 174.89 .245 175.84 .221 176.67 MSE(X) 114 ' 252 421 627 867 1123 1370 1581 1736 1824 1849 1825 1770 1710 1670 1675 1748 1910 2180 2574 3106 3788 4630 5640 6826 8194 9747 11491 13428 15562 53 Az=I-. 59 clearly does not necessarily yield the optimal single dilution design. Observing the "T" column in Table 7 for z=.010 reveals another difficulty with the Az=I.59 "ideal allocation." Even if the researcher's a pvtovi guess of A=160 should happen to be exactly• correct, he can expect to obtain usable experimental results only 86.9% of the time; 13.1% of the time he will observe all the samples fertile and be unable to calculate a meaningful point estimate for A. If, moreover, the researcher guessed too low so that A=300 were the true density, he would obtain unusable results a full 63.2% of the time! This illustrates, of course, the wisdom of the serial dilution design, which protects against obtaining samples either all fertile or all sterile. ■Finally, note from Table 7 just how large a change in the T and the MSE values occurs for such a small change of .002 in the dilution. It appears that the choice of the dilution(s) for the problem of estimating the density of organisms needs to be a carefully considered one. 4.2 A Design Algorithm for the Serial Dilution Experiment The discussion of Table 7 in section 4.1 suggests that one could characterize the serial dilution problems as one of minimizing MSE while controlling P (all samples fertile)=I-T. It seems, then, that 54 the first design consideration of the researcher should be determining p, the risk he is willing to assume of obtaining all fertile samples. This being accomplished, one needs an estimate of X , the largest possible value the researcher believes that X could max reasonably assume. The program in Appendix IV allows the user to input n (the number of samples per dilution), ^max and p (the maximum acceptable probability of obtaining all samples fertile, which will occur, of course, when X=X ). max For various dilution factors, the program outputs z2, the middle dilution of a k=3 serial dilution experiment satisfying the input constraints. For any larger choice of z^, P(X1X2X 3=SSS) will be greater than p. Any smaller choice of Z2 will, in general, increase the MSB values of the estimators. While the program is given for k=3, it readily generalizes to any k. Figure 2 gives the output of the program for n=3, ^max=300, p=.01 and d=l(.5)10. Now the researcher must decide which of the (d,z) pairs meeting his n, X and p constraints gives the smallest MSB. max Recall that the program in Appendix III generates expected values and MSB values for the estimators of sections 3.2.1 to 3.2.4 for designs with any dilution factor d and any middle dilution z . Using the program in Appendix III, then, for each (d,z) pair and over the X values of interest, the researcher may note which (d,z) pair achieves the 55 FIGURE 2 Output for the Program of Appendix IV HOW MANY TUBES PER DILUTION? ?3 WHAT IS THE MAX EXPECTED L? ?300 WHAT IS THE RISK FOR HAVING ALL TUBES FERTILE? ?.01 INPUT THE STARTING D, ENDING D AND JUMPSIZE ?1,10, .5 D Z .00305 1.0 .00314 1.5 .00334 2.0 .00359 2.5 .00389 3.0 .00422 3.5 .00457 4.0 .00492 4.5 5.0 .00527 5.5 .00563 .00598 6.0 6.5 '.00633 .00688 7.0 .00703 7.5 .00738 8.0 .00774 8.5 .00809 9.0 ,00844 9.5 .00880 10.0 56 smallest MSE and for which estimator that smallest MSE occurs. Appendix V gives the output obtained using the program in Appendix III over the (d,z) pairs of Figure 2 for X=IO(10)300. that in each case T = .990 = l-,p for X = X = 300. max Note For the researcher's best a pvtovi guess of X=30, for example, he would construct from Appendix V a summary chart similar to Table 8 giving the MSE for each of the three competing estimators (the discussion z\ zs of section 3.3 eliminated X and X^ from further consideration) at each (d,z) design. Note that the bias-corrected MPN X^ achieves its minimum MSE of 506 for the design (d,z)=(4.5,.00492); the Thomas estimator X^ achieves its minimum MSE of 977 for the design (d,z)= (4.0,.00457); the Johnson-Brown Spearman estimator Xg achieves its minimum MSE of 400 also for the design (d,z)=(4.0,.00457). The researcher should use the estimator Xg and the design with dilution factor 4.0 centered at z2=.00457. Note that in both p=P(all samples fertile) and MSE this design is superior to the original example of Chapters 1-3 of Z 1=.!, Z 2=. 01 and Zg=.001 which, according to Table 4 has p = P(X1X2X 3=SSS) = .015 and MSE(Xg IX=30) = 759. Note also that the selected dilution factor of 4.0 contradicts the previously mentioned advice of Fisher and Yates (1943) and Finney (1978). When constructing a summary chart similar to Table 8, however, the researcher may not wish to be so specific so as to design the xI 57 TABLE 8 MSE Comparisons: d Z2 maximum A = 300 best guess A = 30 MSE(Ac) MSE(Ax) MSE(Ag) 1.0 .00305 799 1332 23741 1.5 .00314 757 1268 5798 2.0 .00334 684 1161 1923 2.5 .00359 618 1071 848 3.0 .00389 566 1009 512 3.5 .00422 530 979 414 4.0 .00457 511 977 400 4.5 .00492 506 997 416 5.0 .00527 514 1027 444 5.5 .00563 532 1059 477 6.0 -.0059 8 559 1087 511 6.5 .00633 591 1106 545 7.0 .00688 629 1113 580 7.5 .00703 670 1109 613 8.0 .00738 713 1093 646 8.5 .00774 756 1067 678 9.0 .00809 800 1034 708 9.5 .00844 844 997 737 10.0 .00880 886 957 765 58 experiment for precisely A=30. Recall, for example, from the single dilution analysis the problems that can arise when the true A value is far from the researcher's best a pviovi. guess. In this case, the researcher could construct his summary chart by entering, for example, the maximum MSE(A|10<A<100) instead of MSE(A)A=30) for each estimator. While this author recommends the preceding algorithm and finds it to be both simple and reliable, a few additional comments and cautions need to be given. First, it should be noted that under every reasonable set of constraints imposed in connection with this paper, (I) the three estimators (i.e., A^,, A^ and A ) all achieved their minimum MSE values at approximately the same (d,z) pair and (2) the Johnson-Brown Spearman estimator A^ proved consistently to be the preferred estimator. As there are no obvious analytical reasons why either of the above should be true without exception, however, they are presented as "observations" and not "conjectures." Secondly, Table 8 indicates that the Thomas estimator A^ MSE value actually peaks for d=7.0 and begins to decrease as d increases. One wonders whether it will ever drop below the 400 value attained /N by Ag for d=4.0. ^ I The answer, unfortunately, is yes, as MSE(A^|A=30). drops to 376 for (d,z)=(60,.04853) and keeps on dropping. In this author's opinion, however, the previously recommended (4.0,.00457) design should still be preferred because (I) dilution factors much greater than 10 reflect too much uncertainty to be of practical . 59 concern and indicate the need for a "preliminary investigation" and (2) the behavior of all the estimators, as mentioned in section 3.3, degenerates for both very large and very small (i.e., near d=1.00) dilution factors. The first statement is a matter of opinion, and Seligman and Mickey (1964), for example., state, "Not infrequently, however, the confidence in the pre-existing estimate is such that a 1,000-fold dilution interval is employed." The second statement recalls the fact that Iim(X)=O. As d increases, there will be some ^ d-*» point at which MSE(X^) is artificially minimized before climbing back to MSE(Xt) = (best guess)2 . A similar phenomenon occurs for the Johnson-Brown Spearman estimator which, as previously noted, -Y—3_ (z ) approaches the constant e 1 as d approaches I. researcher's best guess happens to be close to e If the 1 1 , there will — ITi(Z ) be some point at which MSE(Xg) is artificially minimized before climbing back to MSE(Xg) = ((best guess)-e ^ -*-n (zi^)2 i 5. THE FINITE POPULATION MODEL Each technique described in Chapters 1-4 assumes that the ’s are independent responses or, equivalently, that the samples come from an infinite population. This is certainly acceptable when one is monitoring organism levels in, for example, water systems or dairy products. Suppose, however, the parameter X is the number of organisms in a specific finite volume and not the average number per volume in some conceptually infinite population. In this case, the number of fertile samples cannot exceed X and a point estimate or confidence interval value less than the total number of observed fertile responses is not appropriate. Furthermore, since the infinite model considers the given volume a random sample, it incorporates additional variation due to sampling into point estimates and confidence intervals. Olson, Turbak and McFeters (1979),, for example, employed membrane diffusion chambers to study the survival of organisms in mine waters. After using serial dilution techniques to estimate the number of organisms in a small volume, they placed the volume in mine water in a chamber that allowed the mine water but not the organisms to pass freely in and out of the chamber. Periodically, they used serial dilution techniques to estimate the number of organisms surviving in the chamber. While the authors were investigating a clearly finite population (i.e., they were trying to estimate the true count in a 61 particular chamber at a particular time), they were forced to turn to standard (i .e ., infinite population) MPN tables for point estimates and confidence intervals and concluded "the large confidence intervals inherent in the MPN procedure make a more definite statement difficult to justify." It is interesting to note that McCrady1s (1915) original serial dilution paper dealt exclusively with finite populations. Acknowledging that his mathematical analysis represents only an approximation, he states When more than one volume is to be drawn from the [population], these formulae demand that for each draw the initial conditions must be the same. That is, after the first volume has been drawn, this volume, together with its contained B . coli, must be replaced in the [population] before drawing the next volume. Such a procedure is obviously impossible in practice. But perhaps, when the first volume has been drawn, it may be assumed that a proportionate number of the B . coli have also been drawn in this volume. If so... the value of the general factor... has remained practically unchanged. But even if this assumption is not justified, calculation will show that the error due to non-replacement is, in general, negligible. Although later in the paper he partially works out one specific example correctly accounting for this non-replacement, there is no evidence that he was aware of the exact solution to the general finite population problem. Starting with Greenwood and Yule (1917), papers consider only the simpler and, in truth, more useful infinite model. Several 62 authors (e.g., Cochran 1950), however, use a finite population situation to motivate the serial dilution problem, state that "this is closely approximated by" the infinite model, and then proceed to discuss mathematically only the latter. Section 5.1 develops the exact mathematical formulation of the general finite population problem. In section 5.2, point estimation and interval estimation results are given and compared with those obtained under the usual infinite model. Except where otherwise noted, the examples follow Chapters 1-4 in using the commonly employed and tabled k=3 serial dilution experiment with n/=3 and z^=(.l)^ • for i=l,2,3. 5.1 The General Formula According to Johnson and Kotz (1977), Polya once maintained that "any problem of probability appears comparable to a suitable problem about bags containing balls." The finite population serial dilution problem is, in fact, a variation of the classical occupancy problem of urn modeling. Imagine that each of YXL balls is placed at random into one of n equally likely urns and that X denotes the number of urns thus occupied. The probability that exactly r urns are occupied (see, for example, Johnson and Kotz 1977) is given by (5.1) P(X-r) = ( ^ 1I0 C - D r 1 (^)(i/n)Y r=l,2, .. .,min(n,Y) . Suppose there are n^ equally likely urns of type 1=1,2,3 and 63 that the probability associated with each type i urn is so that P (being placed in a type i urn) = n_z^ and P (not being placed in any urn) = 1-Zn^z^. If Y_^ represents the total number of balls placed in type i urns, then after X balls have been placed (Y1,Y2,Y3) has a multinomial distribution with parameters pu=n^z^ and X. In addition, letting !(X1,X2,X3=r1,r2,r3) = f (X1X2X 3) , (5.2) I(XiZ2X 3) E„ -y y y I(X1X2X 3Jy1y2y3) I 2 3 ECf(X1Iy1) K X 2 Iy2/ )£(X |y3)] - <"3 1v x'I X. ^2 X "3 __,ZX-i-j-k.X1.,X,..X (”0 (JU(^)1I0 S-J0C-1) 1 2 3 J E[(i/ni)Y i(j/n2)Y2(k/n3)Y 3] . The joint moment generating function for the multinomial distibution of (Y1,Y2,Y3) with parameters P 1, P2 , P 3 and X indicates that E[AY iBY 2CY 3] = [p1A+p2B+p3C+(l-p^-p2-p3)]^ for any constants A, B and C. Here, E[ ( i / n ^ ^ (j7n2)Y2 (k/n3)Y 3] = [l-Znz+iz^ j z2+kz3 . Substituting into equation (5.2) gives (5.3) ! ( X 1XzX,) = (%^)(;=) ( : ^)i;wjZok2w(-l)^^~' "'~^(^')(j = )(k=) (1-Znz+iz^ j z2+kz,) \ the exact probability function for the finite population serial dilution problem with X total organisms and n_^ samples at the z^ dilution for i=l,2,3. 64 5.2 Point and Interval Estimation The method of combining independent results (section 2.3) and Fisher's estimate (section 3.2.2) require independent X^'s and, consequently, cannot be used for finite populations. Each of the other techniques of Chapters 1-4, however, can be applied in the finite population situation by using equation (5.3) instead of equation (1.1) to obtain the sampling distribution of the X jX2X 3 values. The program used to generate these probabilities is given in Appendix VI and is the finite analog of the program in Appendix I . Table 9 compares the MPN point estimates and the deMan and minimum expected width interval estimates of the infinite and finite models for the 18 X jX2X 3 results with non-empty minimum expected width confidence intervals. In both the infinite and the finite model, these 18 X 1X2X 3 results include about 98% of the probability for 10<X<300. Note that for the finite model the MPN's are generally slightly smaller and the confidence intervals are generally slightly narrower. The fact that the differences are so minor is noteworthy in that this design involves sampling Zn_z^=.333 of the populationEven when the portion of the finite population sampled is quite significant, apparently, the difference between the infinite and the finite analyses is negligible. Since the Olson et al. (1979) mine water problem of this chapter, for example, involved sampling only very small portions of the population at each step, then, applying the 65 TABLE 9 Infinite and Finite Population Results: n=3, Z1=.! .95 deMan interval estimates MPN values result infinite3 000 010 100 HO 200 201 210 220 300 301 310 311 320 321 322 330 331 332 0.0 3.1 3.6 7.4 9.2 14.3 14.7 21.1 23.1 38.5 42.7 74.9 93.3 149.4 214.7 239.8 462.2 1099.0 finite^ 0 3 3 7 9 14 14 20 22. 37 42 74 93 149 214 239 461 1098 infinite3 <1-17 <1-21 2-28 2-38 5-48 5-50 8-62 <10-130 10-180 10-210 20-280 30-380 50-500 80-640 <100-1400 100-2400 300-4800 finite^ z2=.01 Z3=-OOl .95 minimum expected width intervals infinite^ 0-9 0-13 1-14 2-10 1-18 <1-25 3-20 2-24 2-35 <1-37 5-45 11-14 5-46 5-42 8-59 10-32 8-126 4-120 15-174 14-69 16-210 7-200 27-278 21-180 12-360 33-383 38-400 55-503 . 86-637 130-260 91-1393 26-990 178-2405 70-2000 381-4785 140-4070 finite^ 0-11 2-9 1-21 3-19 2-36 10-14 5-40 10-32 4-120 15-69 8-200 20-170 12-360 37-400 130-250 33-990 70-1990 150-4070 .fone decimal accuracy k integer accuracy Cvalues values values for results 000-222 are given to for results 300-322 are given to for results 330-333 are given to the nearest integer the nearest 10 the nearest 100 ^values less than 100 are given to the nearest integer Values greater than 100 are given to the nearest 10 •. 66 finite population analysis will not affect their conclusions. The finite population deMan Bayesian intervals in Table 9 were obtained using the program in Appendix VII. Recall that deMan (1975) employed a truncated likelihood function to obtain his intervals for the infinite model. The sum of the finite model likelihood values across all posssible X's (i.e., from A=EX to A=00), however, converges analytically to X X X Ef(XiX 1X2X a) = ( ^ ) ( ^ ) ( ^ ) . E^. E ^ ( Z ) ) (h)(%:) (5.4) [(l-Enz+iz1+jz2+kz3)^X]/(Znz-Iz1-jz2-kz3) so that the program in Appendix VII provides exact intervals. It can also be shown that the exact mean of the deMan Bayesian posterior distribution in the finite population case is given by <5'5> 1M o f w ? ) - - XX + tl/Ma !X1X2X,)] (^l><”o (^) J o jIokI? I(Xi)(X2) (X3) [i_£nz+izi+jz2+kz3), Z^X- xJ/ (Znz-Iz1-Jz2-Mz3)2 . Even though the positive skew of the likelihood distribution and the positive bias of the MPN (the mode of the likelihood distribution) prevent the mean and the median of the posterior distribution from being useful point estimates for A, the program in Appendix VII gives these values for completeness. The difference between the infinite and the finite population 67 models is greatest as z_^ appraoches I, at which point all of the •finite population is included in the sample. Table 10 considers 'such an extreme case of the finite population problem and makes the same comparisons as Table 9 but in the case for which Z 1=.!, z2=.03, z 3=.003. While the finite model intervals are, as in Table 9, narrower than their infinite counterparts, even when Tkuz^=.999 of the population is selected for observation, the finite analysis appears to serve mainly to prevent lower interval estimate endpoints from falling below the observed number of fertile tubes when ZX (and, by inference, X) is small. Taken together, Tables 9 and 10 suggest that the finite population model results are essentially identical to those of the infinite model when Zn^z^ is small and differ from those of the infinite model as Zn_z^ approaches I only when X is small. Chapters A 1-4 suggested that the Johnson-Brown Spearman estimator Xg was generally the "best" infinite population estimator, however, so that • ' one should examine the finte analog of Xg before reaching any tentative conclusions. Using equation (5.3) instead of (1.1), this author mimicked the. work of Johnson and Brown (1961) and obtained the following results. (i) For large X, the finite and infinite models yield the same non-bias-corrected.point estimate X = e-y-ln(zx)+[ln(d)][(ZX/n)-.5] 1 68 TABLE 10 Infinite and Finite Population Results: n=3, .95 deMan interval estimates MPN values result 000 010 100 HO 200 201 210 220 300 301 310 311 320 321 322 330 331 332 infInitea Z 1=.! finite^ 0.0 1.0 1.2 2.5 3.1 4.8 4.9 7.0 7.7 12.8 14.2 25.0 31.1 49.8 71.6 79.9 154.1 366.3 infinite0 0 <.3-5.7 I <.3-7.0 I .7-9.3 2 2 .7-13 4 ' 1.7-16 1.7-20 4 6 2.7-31 <3.3-43 7 3.3-60 12 3.3-70 13 24 6.7-93 10-127 30 17-167 49 27-213 71 <33-467 79 33-800 153 100-1600 366 Z2=. 01 .95 minimum expected width intervals finite'3 ■ infInited 0-0 1-2 1-4 2-6 2-9 3-13 3-13 4-17 3-40 5-56 5-68 9-91 10-126 18-165 28-210 30-463 59-800 127-1593 Z 3=.001 finited 0-4 <1-3 <1-8 <1-6 <1-12 4-4 . 2-14 4-10 2-41 0-0 1-1 1-4 2-5 2-10 4-5 3-12 5-11 3-40 5-23 5-23 3-66 4-66 ■ 9-58 6-110 . 13-130 41-84 ■ 10-330 24-660 49->1000 7-60 4-120 13-130 42-87 11-330 24->600 47->600 .^one decimal accuracy ^integer accuracy Cvalues from Table 9.divided by 3 dValues less than 100 are given to the nearest integer values greater than 100 are given to the nearest 10 ' 69 (i.i.) When Zn^z^ is small, COV(X^, ) is negative but negligible and both the finite and the infinite models yield the multiplicative bias correction given in section 3.2.4 and produce the final estimator of equation (3.1). These results, the development of which is sketched in Appendix VIII, support the suggestions of Tables 9 and 10 given above. 6. SUMMARY Even though the serial dilution assay is a standard micro­ biological method for determining the density of organisms in a solution, there has been very little mathematical investigation into the statistical appropriateness of the decimal dilution design, the MPN point estimate and the Woodward (1957) confidence intervals that have been long accepted as standard procedure. This paper, the only recent review of the serial dilution problem, has been the first to compare exact MSE values of competing estimators, the first to provide an algorithm to determine efficient serial dilution designs, and the .first to give the exact formulation of the finite population serial dilution problem. In addition, original serial dilution point estimates and exact confidence intervals were given and compared with the MPN and previously proposed alternatives. It is the author's conclusion that the serial dilution design and estimation recommendations of standard textbooks (e.g., Finney 1978) and reference works (e.g., American Public Health Association 1971) are not adequate and, specifically, (i) The combining independent results (section 2.3) and minimum expected width (section 2.4) confidence interval methods should be the recommended techniques for obtaining one-sided and two-sided confidence intervals respectively. (ii) The algorithm of section 4.2 should be used to Identify both the optimal serial dilution design and the most efficient 71 point estimate. (iii) The finite population probabilities given by equation (5.3) should be used when applicable, especially when X is small and many non-fertile samples are likely. General computer programs that allow the researcher to put the recommendations of this paper into practice (or to compare completely new procedures to those in this paper) appear in the appendices. addition, caveats and areas for further work have been identified throughout the paper. In FOOTNOTES aMcCradytS paper spells out and applies ML estimation several years before Fisher popularized the concept during his "spectacular dispute" with Karl Pearson, who preferred the method of moments estimation (Owen 1976) . Credit for the first clear and explicit formulation of ML estimation by differentiating the likelihood function, however, belongs to Daniel Bernoulli in 1777. Pearson and Kendall (1970) give a translation and discussion of Bernoulli's paper and of Euler's rebuttal (which was published in the same 1777 volume) of Bernoulli's ML ideas. ^The MP N 's given in Figure I, calculated by the program given in Appendix III, also reveal two minor errors in the American Public Health Association (1970) MPN's given in Table I. The MPN's corresponding to H O and 200 should be 7.4 and 9.2 respectively. cNote that this is not the case for the other three 95% confidence intervals given in Table I. The issue here is whether Woodward is really following the accepted testing procedure of rejecting the null hypothesis for the "most extreme" a= .05 of the results when he chooses to reject for "likely" results and not for "unlikely" ones. ^While it is not within the scope of this paper to discuss the biological appropriateness of either the serial diultion or the MF technique for various organisms, their frequent comparison in the literature deserves some comment. Most authors which consider this aspect of the problem (e.g., Middlebrooks, Middlebrooks, Johnson, Wight, Reynolds and Venosa 1978) stress that neither procedure should be regarded as absolute and note that "one technique does not appear to be more reliable than the other." DeMan (1977), however, opinions that "because microbiological standards for foods are becoming increasingly severe, in the future MPN [serial dilution] methods will probably often have to replace plate counts." Futhermore, one standard reference (American Public Health Association 1966, page 139) notes that "the limitations of the plate count method are well known" and "a more accurate method for the enumeration of smallnumbers of organisms is the MPN technique." 73 eThis technique can certainly be applied to deMan’s Bayesian intervals also, and the resulting point estimate would be the median of the posterior distribution. Since, however, deMan's posterior distributions are unimodal and positively skewed, the median of each posterior distribution would be larger than its mode (which is the MPN), and the resulting point estimate would be even more positively biased than the MPN. The same would be true for the estimate obtained by using the mean of the posterior distribution. fWhile Halvorson and Ziegler (1933c) were actually the first to note the positive bias of the MPN, they do not mention the bias as a design factor when selecting dilutions. APPENDICES APPENDIX I n n o n n n o o o PROGRAM TO GENERATE EXACT SAMPLING DISTRIBUTIONS FOR LAMBDA FROM I TO 100 FOR N TUBES AT EACH OF 3 DILUTIONS A IS THE BINOMIAL PROBABILITY W/O THE COEFFICIENT D IS THE BINOMIAL COEFFICIENT X IS THE NUMBER OF FERTILE TUBES Z IS THE DILUTION AMAT SAVES THE VALUES FOR OUTPUT A PAGE AT A TIME (10 LAMBDA VALUES BY 64 TUBE COMBINATIONS)' 5 9 30 40 60 DIMENSION A(3),0(0:10),X(3),Z(3),AMAT(66,40) OUTPUT 'INPUT THE 3 Z VALUES' INPUT Z(I),Z(2),Z(3) OUTPUT 'INPUT N (# TUBES PER Z)' INPUT N D(O) = 1.0 DO 5 I=O5N-I D (1+1)=D(I)*(N-I)/(1+1) L=I DO 60 IM=I,40,4 IF (L>100) GO TO 99 AMAT(I1IM)=L C=O KOUNT=Z DO 40 Xl=O5N DO 40 XZ=O5N DO 40 X3=0,N X(I)=Xl X(Z)=XZ X(3)=X3 CN = D(Xl)*D(XZ)*D(X3) DO 30 1=1,3 A(I) = (I-EXP(-Z(I)*L))**X(I)*(EXP(-Z(I)*L))**(N-X(T) ) F=CN*A (I)*A(2)*A(3) AMAT(KOUNT,IM)=Xl AMAT(KOUNT,IM+1)=X2 AMAT(KOUNT,IM+2)=X3 AMAT(KOUNT,IM+3)=F KOUNT=KOUNT+! C=C+F CONTINUE AMAT(66,IM)=C L=L+1 CONTINUE / 75 APPENDIX I (CONTINUED) 200 70 300 400 99 WRITE (108,200) AMAT(1,1),AMAT(1,5),AMAT(1,9), C AMAT(1,13),AMAT(1,17),AMAT(I,21),AMAT(I,25), C AMAT(1,29),AMAT(1,33),AMAT(1,37) FORMAT (T7,13,9(9X,I3)) DO 70 1=2,65 WRITE (108,300) (AMAT(I1J),1=1,40) FORMAT (X,10(2X,3I1,F7.4)) WRITE (108,400) AMAT(66,I),AMAT(66,5),AMAT(66,9), C AMAT(66,13),AMAT(66,17),AMAT(66,21),AMAT(66,25), C AMAT(66,29),AMAT(66,33),AMAT(66,37) FORMAT (T7,F6.4,9(6X,F6.4)) GO TO 9 END 76 APPENDIX II C C C C C C C C C PROGRAM TO FIND .95 C.I. ENDPOINTS BY THE FISHER-LANCASTER METHOD FOR 3 TUBES AT EACH OF THE DILUTIONS .1,.01,.001 THIS PROGRAM ALSO IDENTIFIES THE ASSOCIATED POINT ESTIMATE D IS THE BINOMIAL COEFFICIENT F IS THE BINOMIAL PROBABILITY PU AND PL ARE THE UPPER AND LOWER P-VALUES • CU-AND CL ARE THE UPPER AND LOWER CHI-SQUARE VALUES 14.45 IS THE CHI-SQUARE VALUE WITH 6 DF AND .025 BEYOND 4 n O- o o 5 DIMENSION D(0:4) ,F(0:4,3) ,PU(3) ,PL(3),CU(3) ,CL(3) ,X(3),Z:(3) REAL L D(O)=I D(D=3 D(2)=3 D(3)=l Z(I)=-I Z (2)=.01 Z(3)=.001 OUTPUT 'HOW MANY FERTILE TUBES PER DILUTION?' INPUT X ( 1 ) , X ( 2 ) , X ( 3 ) OUTPUT L UPPER TAIL LOWER TAIL' OUTPUT ' CHI**2 CHI**2' L=1.00 CONTINUE DO 10 1=0,3 DO 10 J=I,3 I INDEXES THE # OF FERTILE TUBES PER DILUTION J INDEXES THE DILUTIONS F(I1J)=D(I)*(1-EXP(-1*Z(J)))**I C *(EXP(-L*Z(J)))**(3-I) 10 CONTINUE DO 40 J=l,3 S=O N=X(J) DO 11 I=O1N 11 S=S+F(I1J) IF (N.EQ.O) GO TO 19 Sl=O DO 15 I=O1N-I 15 Sl=SlEF(I1J) PU(J)=(S+Sl)/2 77 APPENDIX II (CONTINUED) 19 20 21 25 29 30 40 C. C C C CU(J)=-2*LOG(PU(J)) GO TO 20 CU(J)=2-2*LOG(S) ■CONTINUE T=O DO 21 I=N,3 T=T+F(1,J) Tl=O IF (N.EQ.3) GO TO 29 DO 25 I=N+1,3 T1=T1+F(I,J) PL(J) = (TH-Tl)/2 CL(J)=-2*LOG(PL(J)) GO TO 30 CL(J)=2-2*LOG(T) CONTINUE CONTINUE CHU=CU(1)+CU(2)+CU(3) CHL=CL(I)+CL(2)+CL(3) THE FOLLOWING LINES ELIMINATE OUTPUT NOT NEAR THE POINT ESTIMATE OR THE ENDPOINTS OF THE .95 C.I. ' IF ABS(CHU-14.45).LE.1.00) GO TO 50 IF ABS(CHL-14.45).LE.1.11) GO TO 50 IF ABS(CHU-CHL).LE.1.00) GO TO 50 GO TO 60 50 WRITE (108,200) L,CHU,CHL 200 FORMAT (3X,14,X,2F11.4) 60 . IF ((CHU.GE.16).AND.(CHL.LE.13)) GO TO 4 . L=L+I GO TO 5 END 78 APPENDIX II (CONTINUED) SAMPLE OUTPUT AND EXPLANATION HOW MANY FERTILE TUBES PER DILUTION? ?3,0,1 L UPPER TAIL LOWER TAIL CHI**2 CHI**2 8 9 10 11 2.6784 2.9001 3.0145 15.4329 14.7117 14.0869 13.5394 58 59 60 7.0247 7.0895 7.1541 7.1454 7.1049 7.0653 17! 175 176 177 14.3686 14.4319 14.4951 14.5583 4.8804 4.8700 4.8596 4.8492 2.7878 From the output above, one rejects H :A=X in favor of H :A<A at o o a o the .025 level for A >176 and one rejects H :A=A in favor of H :A>A o— o o a o at the .025 level for A <9. Hence the two-tailed 95% confidence o— interval associated with XiXzXa=SOl extends from 10 to 175 as indicated in the "Combining Independent Results" column of Table I. (As noted in the program, the .025 beyond it is 14.45. value with 6 degrees of freedom and One rejects the null hypothesis when the calculated X2 value falls above 14.45.) 79 APPENDIX III C C C C C C C C C C C C C C C C C C C C PROGRAM TO CALCULATE POINT ESTIMATES, EXPECTED VALUES AND MSE VALUES FOR FIVE SERIAL DILUTION ESTIMATORS MPN: CALCULATED IN LOOP 25, CALLED M IN PROGRAM AND OUTPUT BIAS-CORRECTED MPN: CALCULATED BY ADJUSTING THE MPN, CALLED C IN PROGRAM AND OUTPUT FISHER ESTIMATE: CALCULATED IN LOOP 20, CALLED Y IN THE PROGRAM AND F IN THE OUTPUT JOHNSON-BROWN SPEARMAN ESTIMATE: CALCULATED IN LOOP 20, CALLED B IN THE PROGRAM AND S IN THE OUTPUT THOMAS ESTIMATE: CALCULATED IN LOOP 25, CALLED T IN THE PROGRAM AND OUTPUT C IS THE BINOMIAL COEFFICIENT K IS A DUMMY VARIABLE FOR NEWTON ITERATIONS THIS PROGRAM IS FOR 3 DILUTIONS, N TUBES PER DILUTION AND DILUTION FACTOR D THE PROGRAM DIMENSION STATEMENT MUST BE ADJUSTED FOR EACH N DIMENSION B(0:3N-1),C(0:N),K(30),Y(0:3N-1) REAL K,L,M INTEGER Xl,X2,X3 El(W)=EXP(-Z1*W) E2(W)=EXP(-Z2*W) E3(W)=EXP(-Z3*W) Fl(W)=XlAZl/(1-El(W))+X2*Z2/(l-E2(W))+X3*Z3/(1-E3(W)) C -N*(Z1+Z2+Z3) Cl(W)=-Xl*Zl**2*El(W)/(I-El (W))**2 C - X 2 * Z 2 * * 2 * E 2 (W)/(1-E2(W))**2 C -X3*Z3**2*E3(W)/(1-E3(W))**2 F2(W)=N*El(W)+N*E2(W)+N*E3(W)-TN G2(W)=-N*Zl*El(W)-N*Z2*E2(W)-N*Z3*E3(W) REWIND I OUTPUT 'WHAT IS N?' INPUT N OUTPUT 'WHAT IS THE MIDDLE DILUTION?' INPUT Z2 OUTPUT rWHAT IS THE DILUTION FACTOR?' INPUT D OUTPUT 'INPUT STARTING L , ENDING L , JUMPSIZE' INPUT Al,A2,A3 80 APPENDIX III (CONTINUED) 5 10 20 C C C C C C Zl=Z2*D Z3=Z2/D C(O)=I.0 DO 5 1=0,N-I C(T-HL)=C(I) *(N-I) / (1+1) DO 20 B=O,3*N-I TN=3*N-I K(I)=20 DO 10 J=I ,19 K(J+1)=K(J)-F2(K(J))/G2(K(J)) IF (K(J+l).LE.0) K(J+1)=.01 IF (ABS(K(20)-K(19)).GE..01) GO TO 990 Y(I)=K(20) B(I)=(1/Z1)*EXP(-.57722-.5*LOG(D)+((LOG(D))/N)*1) B(I)=B(I)*(2*N)/(2*N+LOG(D)*LOG(2)) CONTINUE THE FISHER (Y) AND JOHNSON-BROWN (B) ESTIMATES ARE NOW STORED IN MATRICES THE MPN AND THOMAS ESTIMATES WILL NOW BE COMPUTED AND SENT TO A FILE 15 16 17 100 25 DO 25 Xl=O,N DO 25 X2=0,N DO 25 X3=0,N IF (Xl.EQ.N) IF (X2.EQ.N) IF (X3.EQ.N) S=X1+X2+X3 Sl=(N-Xl)*Z1+(N-X2)*Z2+(N-X3)*Z3 S2=N*(Z1+Z2+Z3) T=S/((S1*S2)**.5) IF (X1.EQ.0) IF (X2.EQ.0) IF (X3.EQ.O) K(l)=20 ' DO 15 J=l,29 K(J+1)=K(J)-F1(K(J))/GKK(J)) IF (K(J+1).LE.O) K(J+1)=.01 IF (ABS.(K(30)-K(29)) .GE. .01) GO TO 991 M=K(30) GO TO 17 M=O.00 WRITE (1,100) M,T FORMAT (2F8.3) CONTINUE GO TO 25 GO TO 16 , 81 APPENDIX III (CONTINUED) C C C C C C THE MPN (M) AND THOMAS (T) ESTIMATES HAVE NOW BEEN STORED IN A FILE THE PROGRAM WILL NOW CALCULATE EXACT PROBABILITIES, EXPECTED VALUES, VARIANCES AND MSE VALUES FOR ALL THE ESTIMATORS OUTPUT ' L T E(M) E(C) E(F) E(S) E(T) CMSE(C) MSE(F) MSE(S) MSE(T)' DO 80 L=Al,A2,A3 REWIND I TO=O ■ SM=O SF=O SB=O ST=O SSM=O SSF=O SSB=O SST=O DO 70 Xl=O,N DO 70 X2=0,N DO 70 X3=0,N S=X1+X2+X3 IF (Xl.EQ-.N) IF (X2.EQ.N) IF (X3.EQ.N) GO TO 70 P=C(Xl)*C(X2)*C(X3)* (1-El(L))**X1*(El(L))**(N-Xl) C *(1-E2(L))**X2*(E2(L))**(N-X2) C * (1-E3(L))**X3*(E3(L))**(N-X3) READ (1,200) M,T . 200 FORMAT (2F8.3) TO=TOfP PM=P*M PF=P*Y(S) PB=P*B(S) PT=PaT PPM=PMaM PPF=PFa Y(S) PPB=PBa B(S) PPT=PTaT SM=SMfPM SF=SFfPF SB=SBfPB ST=STfPT MSE(M) 82 APPENDIX III (CONTINUED) SSM=SSMfPPM SSF=SSFfPPF SSB=SSBfPPB SST=SSTfPPT 70 CONTINUE' EM=SM/TO EF=SF/TO EB=SB/TO ET=ST/TO' .•VM=SSM/T0-EM**2 ‘VF=SSF./T0-EF**2 VB=SSB/TO-EB**2 VT=SST/TO-ET**2 •'SEM=VMf(EM-L) **2 SEF=VFf(EF-L)**2 SEB=VBf(EB-L)**2 SET=VTf(ET-L)**2 .TH=EXP(-.805/N) ■e c =e m *t h , VC=VM*TH**2 :SEC=VCf(EC-L)**2 WRITE (108,300) L,TO,EM1EC,EFsEB,SEM,SEC,SEF,SEB,SET ■ 300 FORMAT (I5,F6.3,5F7.2,5110) 80 CONTINUE • GO TO 91 990 OUTPUT 'FISHER ESTIMATE DOES NOT CONVERGE' GO TO 91 • 991 OUTPUT 'MPN ESTIMATE DOES NOT CONVERGE' 91 END 83 APPENDIX IV C C C C C C PROGRAM TO FIND Z (THE MIDDLE DILUTION OF A K=3 DILUTION SERIAL DILUTION EXPERIMENT) FOR A GIVEN DILUTION FACTOR THAT WILL -KEEP P (ALL FERTILE TUBES) TO SOME MAXIMUM INPUT VALUE -ACCEPT L MAX (THE MAXIMUM REASONABLE VALUE LAMBDA ASSUMES) DIMENSION Z (30) REAL J 5L 5M 5N El(W)=I-EXP(-L*D*W) E2(W)=1-EXP(-L*W) E3(W)=I-EXP(-1*W/D) Fl(W)=El(W)*E2(W)*E3(W)-R**(1/N) F2(W)=El(W)*E2(W) * (L/D)*EXP(-L*W/D) C +El(W)*E3(W)*L*EXP(-1*W) C +E2(W)*E3(W)*L*D*EXP(-L*D*W) OUTPUT: 'HOW MANY TUBES PER DILUTION? ' INPUT N ' OUTPUT 'WHAT IS THE MAX EXPECTED L ? ' INPUT L OUTPUT 'WHAT IS THE RISK FOR HAVING ALL TUBES FERTILE?' INPUT R OUTPUT 'INPUT THE STARTING D 5 ENDING D AND JUMPSIZE' . INPUT A 5B 5C OUTPUT ' D Z' . ZD=-(l/L)*LOG(-1-R** (1/3*N))) DO 20 D=A5B 5C Z(I)=ZD DO 10 1=1,29 ' Z (I+1)=Z(I)-F1(Z(I))/F2(Z(I)) IF (Z(I+1).LE.O) Z(I+1)=.000001 10 CONTINUE IF (ABS(Z(30)rZ(29)).GE..0001) GO TO 999 ZD=Z(30) WRITE (108,100) D 5ZD 100 FORMAT (F6.3,F8.5) •' 20 ' CONTINUE GO TO 30 '999 OUTPUT 'Z DOES NOT CONVERGE' 30 END WHAT IS N? T3 APPENDIX .V TABLE A WHAT IS THE MIDDLE DILUTION? 7.00305 WHAT IS THE DILUTION FACTOR? ? 1.0 INPUT STARTING L f ENDING L f JUMP SIZE ?10 F300 F10 L T E(M) E(C) E(F) E(S) 10 1.000 10.61 8.11 10.62 184.08 20 1.000 21.25 16.25 21.25 184,08 30 1.000 31.91 24.40 31.91 184.08 40 1.000 42.59 32.57 42.60 184,08 50 1.000 53.31 40.76 53.31 184.08 60 1.000 64.05 48.98 64.05 184.08 70 1.000 74.82 57.21 74.83 184.08 80 1.000 85.63 65.48 85.63 184.08 90 1.000 96.47 73,76 96.47 184.08 100 1.000 107,34 82.08 107.34 184.08 H O 1.000 118.25 90.42 118.25 184.08 120 1.000 129.19 98.79 129.19 184.08 130 1.000 140.17 107.18 140.17 184.08 140 I ,000 151.18 115.60 151.18 184.08 150 1.000 162.22 124.05 162.22 184.08 160 i .oOo 173.30 132.51 173.30 184,08 170 I .000 184.39 141.00 184.39 184.08 180 1.000 195.51 149.50 195.51 184.08 190 .999 206.64 158.01 206.64 184.08 200 .999 217.77 166.52 217.77 184.08 210 .999 228.89 175.02 228,89 184.08 220 .998 240.00 183.52 240.00 184.08 230 .998 251.09 192.00 251.09 184.08 240 .997 262.14 200.44 262.14 184.08 250 .996 273.14 208.85 273.14 184.08 260 .996 284.07 217.22 284.07 184.08 270 .994 294.94 225.52 294.94 184.08 280 .993 305.71 233.76 305.71 184.08 290 ..992 316.39 241.93 316.39 184.08 300 .990 326.96 250.01 326.96 184.08 *STOP* O E(T) 10.62 21.29 31.99 42.75 53.56 64.43 75.37 86.38 97.47 108.65 119.92 131.28 142.75 154.33 166.02 177.82 189.73 201.74 213.87 226.09 238.39 250.78 263.24 275.75 288.31 300.89 313.48 326.06 338,61 351.13 MSE(M) 418 857 1316 1798 2304 2835 3395 3984 4604 5258 5948 6674 . 7438 8239 9078 9952 10860 11798 12763 13749 14751 15762 16776 17786 18784 19763 20716 21636 22516 23350 MSE(C) 248 514 799 1102 1426 1770 2135 2521 2931 3364 3821 4303 4809 5339 5894 6471 7069 7688 8324 8975 9639 10313 10993 11677 12363 13047 13727 14401 15068 15727 MSE(F) 418 857 1316 1798 2304 ■ 2835 3395 3983 4604 5258 5948 6674 7438 8239 9077 9952 10860 11798 12763 13749 14751 15762 16776 17786 18784 19763 20716 21636 22516 23350 MSE(S) 30305 26923 23741 20760 17978 15396 13015 10833 8851 7070 5488 4106 2925 1943 1161 ' 580 198 16 34 253 671 1289 2108 3126 4344 5763 7381 9199 11218 13436 MSE(T) 420 863 1332 1830 2360 2926 3535 4190 4898 5666 6499 7404 8387 9454 10608 11852 13188 14615 16131 17732 19412 21164 22979 24845 26751 28685 30634 32582 34517 36425 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00314 WHAT IS THE DILUTION FACTOR? ? 1 .5 INPUT STARTING Lr ENDING Lr JUMP SIZE ?10 r300 rIO L T E(M) E(C) E(S) E(F) 10 1.000 10.69 10.69 96.99 8.17 20 1.000 21.41 16.37 21.39 101.01 30 1.000 32.16 24.59 32.12 105.01 40 1.000 42.94 32.84 42.89 109.01 50 I .000 53.76 41.11 53.68 112.99 60 1.000 64.61 49.41 64.51 116.96 70 1.000 75.51 57.74 75.38 120.89 80 1.000 86.44 66.10 86.28 124.81 90 1.000 97.41 74.49 97.22 128.68 100 1.000 108.43 82.91 108.20 132.53 H O 1.000 119.50 91.37 119.22 136.33 120 1.000 130.61 99.87 130.29 140.10 130 1.000 141.77 108.40 141.40 143.82 140 1.000 152.97 116.97 152.55 147.49 150 1.000 164.21 125.56 163.74 151.11 160 1.000 175.49 134.19 174.96 154.68 170 1.000 186.81 142.84. 186.21 158.20 180 I .000 198,16 151.52 197.48 161.65 190 .999 209.52 160.21 208.77 165.05 200 .999 220.90 168.91 220.07 168.39 210 .999 232.29 177.62 231.37 171.66 220 .998 243.66 186.32 242.65 174.86 230 .998 255.02 195.00 253.91 178.00 240 .997 266.35 203.67 265.13 181.06 250 .996 277.64 212.30 276.30 184.06 260 .995 288.87 220.89 287.41 186.98 270 ,994 300.03 229.42 298.44 189.84 280 .993 311.12 237.90 309.38 192.61 290 .992 322.11 246.30 320.22 195.31 300 .990 332.99 254.62 330.95 197.94 *STOP* OY E(T) 10.71 21.46 32.27 43.14 54.07 65.08 76.17 87.35 98.63 110.00 121.49 133.09 144.82 156.67 168.65 180.76 192.99 205.36 217.84 230.43 243.13 255.92 268.79 281.73 294.72 307.75 320.79 333.83 346.86 359.85 MSE(M) 393 809 1249 1717 ■ 2213 2740 3302 3900 4538 5219 5945 6718 7540 8412 9333 10304 11321 12381 13480 14613 15774 16955 18150 19349 20545 21729 22894 24030 25131 26189 MSE(C) 232 485 757 1050 1364 1702 2063 2449 2862 3302 3770 4267 4794 5350 5936 6550 7191 7857 8546 9255 9981 10720 11470 12227 12987 13747 14505 15257 16000 16735 MSE(F) 391 806 1244 1709 2201 2725 3282 3875 4508 5182 5900 6666 7478 8340 9250 10206 11207 12249 13327 14436 15569 16719 17878 19038 20191 21327 22439 23519 24559 25552 MSE(S) 7622 6674 5798 4994 4261 3599 3008 2487 2038 1661 1356 1125 969 890 888 966 1125 1368 1696 2113 2619 3219 3915 4710 5607 6609 7720 8942 10279 11735 MSE(T) 395 816 1268 1755 2280 2849 3469 4147 4891 5708 6607 7596 8683 9876 11180 12598 14134 15787 17556 19436 21422 23505 25675 27921 30230 32587 34978 37387 39799 42199 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00334 UHAT IS THE DILUTION FACTOR? ?2.0 INPUT STARTING L, ENDING Lr JUMP SIZE ?10r300rl0 L 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 T 1.000 1.000 1,000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 .999 .999 .999 .999 .998 .998 .997 .996 .995 .994 .993 .992 .990 TABLE C appendix V *STOP* OY E(M) 10.83 21.70 32.63 43.60 54 i63 65.72 76.86 88.08 99.35 110.70 122.12 133,60 145.16 156.78 168.47 180.21 192.01 203.85 215.72 227.62 239.53 251.44 263.33 275.19 287.01 298.77 310.45 322.05 333.55 344.94 E(C) 8.28 16.59 24.95 33.34 41.77 50.25 58.77 67.35 75.97 84.65 93.38 102.16 110.99 119.88 128.82 137.80 146.82 155.87 164.95 174.05 183.16 192.26 201.35 210,42 219.46 228.45 237.39 246.26 255.05 263.76 E(F) 10.81 21.64 32.52 43.43 54.39 65.39 76.45 87.56 98.72 109.94 12,1.21 132.55 143.94 155.39 166.89 178,43 190.01 201,63 213.26 224.90 236.54 248.16 259.75 271.30 282.79 294.21 305.54 316.77 327.89 338.89 E(S) 60.11 65.32 70.63 76.04 81.52 87.06 92.66 98.28 103.93 109.59 115.25 120.89 126.52 132.11 137.67 143.17 148.62 154.01 159.32 164.56 169.71 174.78 179.75 184.63 189.40 194.07 198.63 203.08 207.43 211.66 E(T) 10.85 21.78 32.79 43.90 55.10 66.41 77.84 89.40 101.08 112.90 124.87 136.99 149-. 25 161.67 174.24 186.95 199.81 212.80 225.90 239.12 252.43 265.82 279,27 292.77 306.29 319.82 333.33 346.82 360.25 373.61 MSE(M) 347 724 1134 1580 2067 2598 3179 3814 4509 5269 6097 6999 7976 9030 10163 11371 12652 14002 15414 16881 18394 19944 21520 23111 24707 26296 27867 29411 30916 32374 MSE(C) 205 433 684 961 1263 1595 . 1957 2352 2782 3249 3755 4302 4890 5520 6191 6902 7652 8436 9253 10097 10965 11852 12753 13663 14578 15491 16400 17300 18188 19060 MSE(F) 344 716 1120 1557 2033 2552 3118 3737 4413 5152 5958 6834 7782 8805 9902 11070 12306 13606 14963 16368 17813 19288 20782 22285 23786 25273 26737 28166 29553 30888 MSE(S) 2589 2222 1923 1685 1504 1377 1301 1272 1288 1346 1446 1586 1766 1984 2240 2535 2869 3243 3659 4117 4620 5170 5769 6421 7128 7894 8723 9618 10584 11624 MSE(T) 350 735 1161 1634 2162 2752 3415 4159 4995 5936 6990 8169 9481 10933 12531 14276 16168 18205 20382 22690 25119 27655 30286 32995 35764 38578 41416 44262 47098 49906 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? ?.00359 WHAT IS THE DILUTION FACTOR? ?2.5 INPUT STARTING Lr ENDING Lr JUMP SIZE ?10r300r10 E(T) .HE(F) E(S) T E(M) E(C) 11.01 10 1.000 10.97 8.39 10.93 41.29 47.09 22 r14 20 1.000 22.02 16.84 21.91 33.41 53.12 30 1.000 33.15 25.35 32.94 44.82 59.36 40 1.000 44.36 33.92 44.04 56.39 50 1.000 65.77 55.67 42.56 55.20 68.12 60 1.000 72.33 67.06 51.28 66.43 80,01 70 1.000 79.01 78.55 60.07 77.73 92.06 80 1.000 85.78 68.93 89.11 90.14 92.62 104.28 90 1.000 101.83 77.87 100.56 99.50 116.67 100 1.000 113.62 86.88 112.09 H O 1.000 125.51 95.97 123.70 106.40 129.23 MSE(M) 302 644 1031 1467 1962 2521 3153 3866 4669 5568 6570 MSE(C) 179 384 618 884 1183 1521 1899 2323 2795 3319 3897 MSE(F) 298 632 1006 1426 1900 2435 3040 3721 4489 5349 6309 141.94 154.80 167.81 180.95 194.20 207.56, 220.99 234.50 248.05 261.63 275.22 288.79 302.33 315.82 329.24 342.58 355.80 368.91 381.89 7680 8901 10234 11676 13224 14872 16612 18434 20327 22277 24271 26296 28337 30380 32411 34417 36385 38305 40166 4532 5224 5973 6778 7635 8543 9495 10487 11513 12566 13640 14729 15825 16924 18017 19101 20171 21222 22250 7372 8540 9815 11195 12674 14246 15903 17636 19431 21277 23160 25066 26982 28895 30790 32655 34479 36251 37962 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 *STnp* I FL 1.000 1.000 1.000 1.000 I .OOO 1.000 .999 .999 .999 .998 .998 .997 .997 .996 .995 .994 .993 .992 .990 nv 137.50 149.58 161.74 173.99 186.30 198.66 211.07 223.50 235.95 248.39 260.81 273.20 285.53 297.80 309.98 322.06 334.04 345.88 357.60 105.14 114.38 123.68 133.04 142.45 151.91 161.39 170.90 180.42 189.93 199,43 208.90 218.33 227.71 237.03 246.27 255.42 264.48 273.44 135.39 147.14 158.96 17.0.84 182.76 194.72 206.71 218.71 230.70 242.67 254.62 266.51 278.34 290.09 301.75 313.30 324.74 336.05 347.22 113.31 120.20 127.06 133.87 140.63 147.31 153.92 160,43 166,84 173.14 179.33 185.41 191.35 197.17 202.86 208.41 213.84 219.12 224,27 MSE(S) 1059 918 848 841 891 991 1136 1322 1545 1802 2088 2402 2741 . 3104 3490 3897 4324 4773 5242 5734 6249 6789 7356 7953 8581 9245 9948 10692 11483 12325 MSE(T) 306 660 1071 1547 2099 2739 3477 4327 5298 6403 7650 9047 10598 12306 14170 16186 18348 20646 23067 25599 28224 30926 33687 36488 39311 42137 44949 47729 50462 53133 WHAT IS N? ?3 TABLE E appendix V. WHAT IS THE MIDDLE DILUTION? ?«00389. WHAT IS THE DILUTION FACTOR? ?3.0 INPUT STARTING L, ENDING L, JUMP SIZE ?10,300,10 L T E(M) E(C) E(F) E(S) 10 1.000 11.11 8.50 30,41 11.05 20 1.000 22.34 22.17 36.61 17.08 30 1.000 33.71 25.77 43.20 33.38 40 1.000 45.20 34.57 44.68 50.12 50 1.000 .56,84 57.30 43.46 56.08 60 1.000 68.62 52.47 67.58 64.70 70 1.000 72.26 80.54 61.58 79.18 80 1.000 70\ 80 90.88 79.94 92.59 90 1.000 104.78 80.12 102.68 •87.70 100 1.000 117.09 95.50 89.54 114.57 H O 1.000 129.52 99.04 126.55 103.32 120 1,000 142.06 108.63 138.61 111.12 130 1.000 154.69 118.29 150.73 118,89 140 1.000 167.40 128.00 162.92 126,60 150 1.000 180.17 137.77 175.15 134.23 160 1.000 192.99 147,57 187.40 141.78 170 .999 205.84 157.40 199.68 149.22 180 .999 218.70 167.23 211.95 156.55 190 .999 231.55 177.05 224,21 163.76 200 .999 244.37 186.86 236.43 170.84 210 .998 257.15 196.63 248.61 177.79 220 .998 269.87 206.35 260.73 184.60 230 .997 282.51 216.02 272.77 191.26 240 .996 295.06 225.62 284.72 197.78 250 .996 307.51 235.14 296.57 204.15 260 .995 319.84 244.56 308.31 210.38 270 .994 332.04 253.89 319.92 216.46 280 ,993 344.10 263.11 331.40 222.39 290 .991 356.01 272.22 342.74 228.18 300 .990 367.77 281.22 353.93 233.82 *STOP* OY E(T) 11.17 22.53 34.11 45.91 57.92 70.15 82.58 95.20 108.00 120.94 134,02 147.22 160.51 .173.87 187.28 200.71 214.16 ■227.58 240.98 254.31 267.58 280.76 293.83 306.78 319.60 332.28 344.80 357.16 369.35 381.36 MSE(M) 264 578 9.51 1394 1918 2533 3253 4089 5050 6146 7383 8765 10290 11957 13759 15688 17732 19878 22111 24416 ' 26776 29175 ■ 31594 34020 36435 38825 41177 43478 45717 47883 MSE(C) 155 343 566 829 1136 1494 1908 2382 2922 3532 4214 4969 5797 6696 7662 8690 9775 10910 12087 13298 14535 15790 17056 18325 19590 20846 22085 23304 24498 25664 MSE(F) 258 560 914 1332 1824 2403 3080 3868 4777 5815 6988 8299 9747 11330 13040 14870 16809 18842 20955 23134 25361 27621 29898 32176 34440 36676 38872 41015 43095 45102 MSE(S) 493 465 512 626 799 . 1022 1292 1601 1946 2321 2724 3151 3599 4066 4549 5046 5557 6081 6617 7165 7727 8303 8895 9504 10133 10785 11463 12169 12907 13680 MSE(T) 269 601 1009 1505 2103 2814 3649 4618 5729 6988 8398 9961 ■11673 13529 15520 17636 19863 22186 24590 27057 29569 32111 34663 37211 39738 42229 44670 47050 49357 51581 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00422 WHAT IS THE DILUTION FACTOR? ?3.5 INPUT STARTING Lr 710,300,10 T L E(M) 10 1.000 11.24 20 1.000 22.67 30 1.000 34.31 40 1.000 46.14 50 1.000 58.18 60 1.000 70.40 70 1.000 82.80 80 1.000 95.37 90 1,000 108.08 100 1.000 120.91 H O 1.000 133.85 120 1.000 146.87 130 1.000 159.95 140 1.000 173.07 150 1.000 186.21 160 1.000 199.34 170 .999 212.46 180 .999 225.54 190 .999 238.56 200 .998 251.51 210 .998 264.38 220 .998 277.16 230 .997 289.82 240 .996 302.38 250 .995 314.80 260 .995 327.10 270 .994 339.25 280 .993 351.26 290 .991 363.12 300 .990 374.83 *STOP* OY > X H W Ph ENDING Lr JUMP SIZE E(C) 8.60 17.34 26.23 35.28 44.48 53.83 63.32 72.92 82.64 92.45 102.35 112.30 122.31 132.34 142.38 152.43 162,46 172.46 182.42 192.32 202.16 211.93 221.62 231.21 240.72 250.12 259.41 268.59 277.66 286.61 E(F) 11.16 22.43 33.84 45.37 57.05 68.85 80.78 92.83 104.98 117.23 129.55 141.93 154,35 166.81 179.27 191.73 204.18 216.59 228.95 241.26 253.49 265.65 277.71 289.67 301.51 313.24 324.84 336.31 347.64 358.82 E(T) E(S) 23.68 11.32 30.26 22.95 34.90 37.38 47.15 44.93 52.81 59.69 72.46 60.94 69.24 85.43 98.56 77.65 86.12 111.80 94.60.125.11 103.06 138.46 111.45 151.82 119.77 165.16 127.99 178.45 136.10 191.67 144.08 204.81 151.93 217.83 159.63 230.74 167.20 243.52 174.61 256.15 181.88 268,64 188.99 280.97 195.96 293.13 202.77 305.14 209.44 316.97 215.95 328.62 222.32 340.11 228.55 351.41 234.63 362.54 240.57 373.49 MSE(M) 232 528 901 1368 1945 2647 3490 4487 5648 6981 8488 10168 12016 14023 16177 18463 20867 23370 25954 28600 31291 34008 36734 39452 42148 44807 47415 49962 52436 54828 MSE(C) 136 311 530 800 1128 1522 1989 2535 3165 3883 4689 5582 6560 7618 8750 9948 11203 12508 13854 15230 16628 18039 19456 20870 22274 23663 25031 26373 27685 28963 MSE(F) 225 504 852 1284 1817 2470 3256 4189 5280 6534 7954 9538 11282 13178 15213 17374 19646 22012 24454 26955 29497 32062 34635 37198 39738 42241 44695 47087 49409 51651 MSE(S) 259 297 414 602 852 1157 1510 1906 2340 2807 3303 3823 4365 4924 5498 6085 6683 7290 7906 8529 9160 9800 10448 11107 11778 12463 13165 13886 14628 15396 MSE(T) 239 560 979 1511 2167 2954 3881 4950 6163 7520 9014 10640 12388 14246 16201 18239 20345 22503 24698 26913 29135 31350 33544 35705 37821 39883 41882 43809 45657 47422 WHAT IS NT ?3 WHAT IS THE MIDDLE DILUTION? ?.00457 WHAT IS THE DILUTION FACTOR? ?4.0 INPUT STARTING Lr ENDING Lr JUMP SIZE ? IO r300 rIO L T E(M) E(C) E(S) E(F) 10 1.000 11.37 11.27 19.33 8.69 20 1.000 23.02 17.60 22.70 26.28 30 1.000 34.96 26.74 34.32 33.92 40 1.000 47.19 46.12 42,07 36.08 50 1.000 59.67 58.10 50.59 45.63 60 1.000 72.38 70.23 59.35 55.34 70 1.000 85.28 > 65.21 82.50 68.26 80 1.000 94 ..88 -77.22 98.33 75.19 90 1.000 111.50 86.18 85.26 107.34 100 1.000 124.75 95.10 95.39 119.87 H O 1.000 138.06 105.57 132.43 103.93 120 1.000 151.40 115.77 145.02 112.66 130 1.000 164.74 125.97 157.62 121.26 140 1.000 178.06 136.16 170.20 129.73 150 1.000 191.35 146,32 182.77 138.05 160 .999 204.59 156,44 195.30 146.23 170 .999 217.76 166,51 207.79 154.26 180 .999 230.87 176.53 220.22 162.13 190 .999 243.88 186.49 232.60 169.86 200 .998 256.81 196.37 244.91 177.44 210 .998 269.64 206,18 257.14 184,87 220 .997 282.37 215.92 269.29 192.16 230 .997 294.99 225.57 281.34 199.30 240 ,996 307.50 235.13 293.30 206.30 250 .995 319.88 244.60 305.15 213.16 260 .994 332.15 253.98 316.89 219.89 270 .993 344.28 263.26 ,328.51 226.47 280 .992 356.28 272.43 340.01 232.92 290 .991 368.15 281.51 351.38 239.24 300 .990 379.88 290.47 362.61 245.42 2STnP* X H I Pm <! AY E(T) 11.48 23,41 35.79 48.56 61.62 74.89 88.28 101.71 115.14 128.49 141.74 154.86 167.83 180.63 193.26 205.71 217.97 230.06 241.96 253.68 265.24 276.61 287.82 298.86 309.74 320.45 331.00 341.39 351.62 361.69 MSE(M) 207 494 880 1389 2041 2855 3848 5032 6415 7998 9779 11749 13898 16211 18672 21263 23965 26758 29623 32541 35493 38461 41428 44379 47298 50172 52988 55733 58399 60976 MSE(C) 122 289 511 797 1157 1601 2136 2769 3503 4339 5277 6311 7436 8646 9931 11282 12690 14144 15635 17152 18687 20230 21773 23308 24828 26328 27801 29242 30647 32012 MSE(F) 199 464 817 1281 1880 2632 3554 4657 5948 7429 9097 10945 12963 15139 17457 19901 22451 25092 27802 30566 33363 36178 38994 41796 44568 47299 49976 55588 55125 57578 MSE(S) 156 235 400 640 946 1313 1734 2202 2712 3259 3838 4445 5075 5723 6388 7064 7751 8445 9145 9850 10559 11272 11989 12711 13438 14173 14916 15670 16438 17222 MSE(T) 217 536 977 1552 2264 3115 4105 5231 6485 7862 9350 10938 12614 14364 16175 18033 19924 21836 23756 25672 27572 29446 31285 33079 34821 36504 38122 39669 41141 42534 WHAT IS N? ?3 — I I cn WHAT IS THE MIDDLE DILUTION? 7.00492 • WHAT IS THE DILUTION FACTOR? ?4.5 INPUT STARTING L, ENDING L, JUMP1 SIZE 710,300,10 L T E(M) E(C) E(S) E(F) 10 1.000 11.50 8.79 16.43 11.37 20 1.000 23.39 17,89 23.77 22.97 30 1.000 35.69 27.29 31.93 34.83 40 1.000 48.34 36.97 40.65 46.93 50 1.000 61.29 46.87 49.72 59.22 60 1.000 56.94 58.98 74.46 71.67 70 1.000 87.80 67.14 68.32 84.24 80 1.000 101.24 77.64 77.41 96.88 • 90 1.000 114.73' 87.73 109.56 86.90 100 1.000 128.24 98.06 122-. 25 -96.04 H O 1.000 141.74 108.38 134.94 105.05 120 1.000 155.20 118.67 147.61 113.91 130 1.000 168.61 128.93 160.26 122.62 140 1.000 181.96 139.14 172.87 131.18 150 1.000 195.25 149.30 185.44 139.58 160 .999 208.46 159.40 197.98 147.84 170 .999 221,60 169.44 210.46 155.96 180 .999 234* 66 179.43 222.90 163.93 190 .999 247.64 189.36 235.29 171.77 200 .998 260.55 199.23 247.61 179.47 210 .998 273.37 209.03 259.87 187.05 220 .997 286.11 218.77 272.06 194.49 230 .997 298.75 228.44 284.17 201.80 240 .996 311.30 238.04 296.19 208.98 250 .995 323.76 247.56 308.12 216.04 260 .994 336.10 257.00 319.95 222.96 270 .993 348.34 266.36 331.68 229.76 280 .992 360.45 275.62 343.29 236.44 290 .991 372.45 284.79 354.77 242.98 300 .990 384.32 293.87 366.13 249.40 3ST0P* : OY S I PM E(T) 11.64 23.93 36.79 50.07 63.59 77.21 90.79 104.24 117.51 130.56 143.36 155.91 168.21 180.27 192.11 203.73 215.14 226.37 237.42 248.31 259.03 269.60 280.02 290.29 300.42 310.41 320.26 329.97 339.53 348.95 MSE(M) 189 474 886 , 1452 2197 3141 4299 5679 7282 9105 11137 13367 15778 18354 21074 23921 26874 29913 33019 36173 39355 42549 45736 48902 52031 55108 58121 61058 63907 66660 MSE(C) HO 275 506 817 1219 1723 2336 3063 3905 4861 5925 7093 8355 9702 11125 12614 14157 15743 17363 19007 20663 22324 23980 25624 27247 28844 30408 31934 33418 34856 MSE(F) 179 438 809 1323 2004 2874 3944 5222 6709 8402 10295 12375 14630 17044 19602 22284 25072 27949 30895 33893 36924 39972 43020 46053 49057 52017 54921 57759 60519 63194 MSE(S) 108 217 416 697 1051 1471 1951 2485 3066 3689 4347 5037 5752 6487 7240 8005 8779 9560 10345 11132 11920 12708 13495 14282 15068 15855 16645 17438 18238 19045 MSE(T) 201 527 997 1611 2366 3254 4269 5400 6638 7971 9389 10878 12427 14024 15658 17315 18987 20661 22328 23979 25604 27196 28746 30248 31696 33084 34409 35665 36851 37963 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00527 WHAT IS THE DILUTION FACTOR? ?5.0 INPUT STARTING Lr TlOrSOOrlO L T E(M) 10 1.000 11.63 20 1.000 23.80 30 1.000 36.49 40 1.000 49.58 50 1.000 62.97 60 1.000 76.54 70 1.000 90.20 80 1.000 103.88 90 1.000 117.53 100 1,000 131.12 H O 1.000 144.64 120 1.000 158.09 130 1.000 171.46 140 1.000 184.76 150 1.000 198.00 160 .999 211.18 170 .999 224.31 180 .999 237.39 190 .999 250.42 200 .998 263.39 210 ,998 276.31 220 .997 289.16 230 .997 301.95 240 .996 314.66 250 .995 327.29 260 .994 339.83 270 .993 352.26 280 .992 364.58 290 .991 376.78 300 .990 388.85 ItSTOPA OY > X H H W r4 ENDING Lr JUMP SIZE E(C) 8.89 18.20 27.90 37.91 48.15 58.53 68.97 79.43 89.87 100.26 110.60 120.88 131.11 141.28 151.40 161.48 171.52 181.52 191.48 201.40 211.28 221.11 230.89 240.61 250.27 259.85 269.36 278.78 288.10 297.33 E(F) 11.47 23,26 35.38 47.78 60.38 73.10 85.89 98.69 111.47 124.22 136.93 149.60 162.24 174.84 187.41 199,95 212.47 224.95 237.39 249.80 262.16 274.46 286.70 298.86 310,94 322.92 334.80 346.57 358.21 369.72 E(S) 14,44 22.19 30.85 40.07 49.59 59.21 68.82 78.32 87.69 96.91 105.95 114,84 123.58 132.17 140.62 148.94 157.14 165.21 173,17 181.02 188.75 196.36 203.86 211.24 218.51 225.64 232.66 239.55 246.32 252.95 E(T) 11.82 24.50 37.86 51.60 65,45 79.19 92.68 105.85 118.67 131.14 143.26 155.07 I66,60 177.87 188.92 199.77 210.44 220.95 231.31 241.53 251.63 261.59 271.43 281.14 290.72 300,18 309.51 318.70 327.75 336,67 MSE(M) 175 468 915 1550 2399 3481 4806 6375 8184 10222 12476 14931 17570 20372 23321 26395 '29574 32839 36170 39546 42950 46362 49765 53141 56474 59750 62955 66076 69102 72023 MSE(C) 102 268 514 857 1308 1877 2572 3394 4342 5410 6593 7883 9269 10741 12290 13903 15569 17277 19016 20775 22543 24312 26071 27812 29527 31210 32853 34453 36004 37503 MSE(F) 164 425 825 1400 2176 3169 4386 5829 7494 9375 . 11461 13741 16199 18820 21588 24483 27489 30587 33758 36984 40246 43528 46811 50080 53320 56516 59655 62725 65715 68614 MSE(S) 85 216 444 760 1156 1626 2162 2757 3405 4099 4833 5602 6*398 7217 8053 8903 9762 10626 11492 12358 13221 14080 14935 15783 16627 17466 18301 19134 19967 20802 MSE(T) 190 530 1027 1671 2447 3342 4345 5442 6624 7880 9199 10571 11985 13430 14897 16377 17859 19334 20793 22228 23632 24998 26318 27587 28801 29956 31047 32074 33033 33924 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00563 WHAT IS THE DILUTION FACTOR? ?5.5 CO o\ INPUT STARTING Lr ?10,300 ,10 L T E(M) 10 I .000 11.76 20 I .000 24.25 30 I .000 37.35 40 I .000 50.87 50 I .000 64.64 60 I .000 78.49 70 I .000 92.33 80 I .000 106.09 90 I .000 119.75 100 I .000 133.30 H O I .000 146.76 120 I .000 160,14 130 I .000 173.45 140 I .000 186.73 150 .999 199.97 160 .999 213.20 170 .999 226.40 180 .999 239.60 190 .998 252.77 200 .998 265.92 210 .998 279.04 220 .997 292.11 230 .996 305.12 240 .996 318.07 250 .995 330.93 260 .994 343.70 270 .993 356.36 280 .992 368.90 290 .991 381.31 300 .990 393.58 *STOP* OY > I PL ENDING L , JUMP SIZE E(C) 9.00 18.54 28.56 38.90 49.43 60.02 70.60 81.12 91.57 101.93 112.22 122.45 132.63 142.78 152.91 163.02 173.12 183.21 193.28 203.34 213.37 223.36 233.31 243.21 253.05 262.81 272.49 282.08 291.57 300.95 E(F) 11.57 23.57 35.98 48.67 61.53 74.45 87.36 100.22 113,01 125.74 138.42 151.07 163.69 176.30 188.91 201.51 214.11 226.71 239.28 251.84 264.35 276.82 289,23 301.57 313.82 325.97 338.01 349.94 361.73 373.38 E(S) 13.04 21.21 30.34 39.99 49.84 59.67 69.39 78.94 88.31 97.50 106.53 115.41 124.15 132,77 141.28 149.69 157.99 166.20 174.32 182.33 190.24 198.04 205.73 213.31 220.77 228.11 235.32 242.40 249.35 256.16 E(T) 12.01 25.13 38.98 53.08 67.04 80.64 93.78 106.42 118.59 130.33 141.69 152.75 163.54 174,11 184.50 194.73 204.82 214.79 224.64 234.38 244.01 253,53 262.93 272.22 281.38 290.42 299.32 308.08 316.70 325.17 MSE(M) 165 471 961 1674 2634 3854 5337 7080 9072 11300 13750 16404 19245 22254 25411 28698 32092 35573 39120 42712 46329 49951 53558 57132 60657 64116 67495 70781 73962 77028 MSE(C) 96 267 532 911 1415 2053 2829 3743 4789 5962 7254 8655 10155 11743 13406 15134 16913 18733 20580 22444 24313 26177 28026 29851 31645 33400 35109 36768 38373 39918 MSE(F) 153 422 860 1506 2381 3494 4847 6437 8258 10301 12556 15010 17650 20459 23423 26521 29738 33052 36445 39897 43389 46903 50419 53921 57392 60816 64180 67470 70676 73786 MSE(S) 75 224 477 825 1260 1776 2364 3017 3727 4489 5294 6135 7008 7904 8819 9747 10684 11624 12565 '13503 14435 15359 16274 17180 18076 18962 19840 20711 21576 22439 MSE(T) 184 539 1059 1717 2492 3367 4331 5371 6481 7649 8868 10127 11419 12732 14059 15388 16712 18021 19307 20562 21780 22955 24080 25152 26168 27124 28019 28852 29623 30332 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00598 WHAT IS THE DILUTION FACTOR? ?6.0 APPENDIX V TABLE K INPUT STARTING Lr ?IO r300 rIO L T E(M) 10 1.000 11.91 20 1.000 24.73 30 1.000 38.25 40 1.000 52.15 50 1.000 66.20 60 1.000 80.20 70 1.000 94.08 80 1.000 107.80 90 1.000 121.37 100 1.000 134.83 H O I .000 148.21 120 I .000 161.55 130 1.000 174.87 140 1.000 188.20 150 .999 201.54 160 .999 214.91 170 .999 228.31 180 .999 241.71 190 .998 255.12 200 .998 268.53 210 .998 281.90 220 .997 295.24 230 .996 308.52 240 .996 321.72 250 .995 334.84 260 .994 347.84 270 .993 360.72 280 .992 373.47 .991 386♦06 290 300 .990 398.50 *STOP* OY ENDING Lr JUMP SIZE E(C) 9.11 18.91 29.24 39.88 50.62 61.33 71.94 82.43 92.81 103.10 113.33 123.53 133,72 143.91 154.11 164.33 174.57 184.83 195.08 205.33 215.56 225.76 235.91 246.01 256.03 265.98 275.83 285.57 295.20 304.72 E(F) 11.68 23.91 36.60 49.56 62.62 75.64 88.58 101.42 114.16 126.85 139.50 152.15 164,80 177.48 190.19 202.92 215.67 228.43 241,19 253.94 266.65 279.31 291.91 304.43 316.85 329.17 341.36 353.43 365.35 377.12 E(S) 12.06 20.64 30.21 40.19 •50.23 60.15 69.87 79.38 88.70 97.84 106.84 115.72 124.50 133.20 141.81 150.35 158.81 167.18 175.47 183.67 191.77 199.77 207.65 215.42 223.06 230.58 237.96 245.21 252.32 259.28 E(T) 12.23 25.81 40.09 54.38 68.23 81.47 94.04 106.01 117.45 128.46 139.13 149.53 159.72 169,75 179.65 189.43 199.11 208.69 218.18 227.58 236.87 246.05 255.11 264.05 272.87 281.54 290.07 298.45 306*68 314.74 MSE(M) 159 482 1023 1817 2887 4237 5865 7763 9917 12315 14941 17780 20813 24021 27385 30883 34493 38193 41959 45769 49602 53434 57247 61020 64735 68377 71930 75381 78717 81928 MSE(C) 92 270 559 976 1535 2240 3094 4093 5231 6500 7893 9398 11005 12702 14475 16313 18201 20127 22079 24044 26009 27965 29902 31809 33679 35504 37279 38998 40656 42252 MSE(F) 145 428 912 1632 2603 3826 5299 7017 8973 11159 13567 -16183 18997 21991 25150 28454 31885. 35423 39045 42731 46460 50211 53966 57704 61409 65064 68654 72165 75586 78904 MSE(S) 71 235 511 889 1362 1921 2558 3266 4036 4861 5733 6645 7590 8561 9551 10554 11565 12579 13591 14597 15595 16582 17556 18517 19464 20398 21319 22230 23130 24024 MSE(T) 181 553 1087 1744 2500 3338 4250 5228 6266 7356 8489 9656 10848 12054 13266 14473 15667 16838 17979 19083 20145 21158 22120 23027 23878 24671 25407 26086 26710 27281 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00633 WHAT IS THE DILUTION FACTOR? ?6.5 appendix V INPUT STARTING Lr ? IO r300 rIO L T E(M) 10 1.000 12.07 20 1.000 25.24 30 I ,000 39.16 40 1.000 53.38 50 1.000 67.58 60 1.000 81.60 70 1.000 95,41 80 1.000 109.02 90 1.000 122.49 100 1.000 135.87 H O 1.000 149.23 120 1.000 162.60 130 1.000 176.02 140 1.000 189.49 150 .999 203.03 160 .999 216.63 170 .999 230.28 180 .999 243.96 190 .998 257.65 200 .998 271.34 210 .997 285.00 220 .997 298.61 230 .996 312.14 240 .996 325.59 250 .995 338.92 260 .994 352.13 270 .993 365.19 280 .992 378.10 290 .991 390.84 300 .990 403.39 *STOP* OY I S ENDING Lr JUMP SIZE E(C) 9.23 19.30 29.94 40.81 51.67 62.40 72.96 83.36 93.66 103.89 114.11 124.33 134.59 144,89 155.25 165.65 176.08 186.54 197.02 207.48 217.93 228.33 238.68 248.96 259.16 269.25 279.24 289.11 298.85 308.46 E(F) 11.79 24.26 37.23 50.41 63.58 76.63 89.53 102.30 114.99 127.65 140.31 153.01 165.76 178.57 191.43 204.34 217.29 230.26 243.22 256.17 269.08 281.93 294.71 307.39 319.97 332,43 344.75 356.92 368.94 380.79 E(S) 11.37 20.36 30.29 40.50 50.62 60.52 70.18 79.61 88.86 97.97 106.97 115.90 124.77 133.58 142.33 151.03 159.66 168.22 176.70 185.09 193.37 201.54 209.60 217.53 225.33 232.99 240.51 247.89 255.11 262.19 E(T) 12.46 26.52 41.13 55.42 68.96 81.64 93.53 104.78 115.52 125.88 135.97 145.86 155.61 165.25 174.80 184.26 193.65 202.96 212.18 221.30 230.31 239.20 247.97 256.60 265.08 273.42 281.59 289.60 297.45 305.12 MSE(M) 156 501 1096 1973 3147 4616 6374 8410 10712 13266 16060 19076 22297 25703 29272 32981 36805 40721 44702 48725 52765 56800 60808 64769 68664 72476 76190 79792 83271 86616 MSE(C) 89 277 591 1049 1662 2432 3358 4436 5659 7019 8507 10111 11820 13620 15498 17440 19432 21460 23510 25569 27625 29667 31684 33667 35608 37499 39335 41110 42821 44465 MSE(F) 139 441 975 1770 2829 4150 5728 7558 9636 11955 14508 17284 20271 23452 26809 30323 33973 37735 41587 45506 49469 53454 57440 61406 65333 69206 73008 76724 80343 83853 MSE(S) 69 248 545 952 1460 2060 2744 3503 4329 5214 6150 7129 8143 9184 10245 11319 12400 13482 14561 15631 16691 17736 18766 19780 20776 21756 22720 23669 24607 25534 MSE(T) 181 567 1106 1748 2471 3264 4124 5045 6021 7046 8109 9200 10310 11427 12541 13642 14721 15770 16783 17752 18674 19546 20365 21130 21840 22498 23103 23660 24170 24639 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00668 WHAT IS THE DILUTION FACTOR? ?7.0 INPUT STARTING Lr ?10 r300 r10 L T E(M) 10 1.000 12,24 20 1.000 25.79 30 1.000 40.07 40 1.000 54.49 50 1.000 68.73 60 1.000 82.68 70 1.000 96.36 80 1.000 109.84 • 90 1.000 123.23 100 1.000 136»60 H O 1.000 150.01 120 1.000 163.51 130 1,000 177.11 140 I .000 190.81 150 .999 204.62 160 .999 218.50 170 .999 232.44 180 .999 246.42 190 .998 260.41 200 .998 274.38 210 .997 288.30 220 .997 302.15 230 .996 315.91 240 .996 329.56 250 .995 343.07 260 .994 356.44 .993 369.63 270 280 .992 382.65 290 .991 395.48 300 .990 408.11 *STOP* O H I FM % ENDING Lr JUMP SIZE E(C) 9.36 19.72 30.64 41.67 52.56 63.22 73.68 83.99 94.23 104.45 114.71 125,03 135.43 145.91 156.46 167.08 177.74 188.43 199.12 209.80 220.45 231.04 241.56 252.00 262.33 272.55 282.64 292.60 302.40 312.06 E(F) 11.91 24.63 37.86 51.20 64.40 77.40 90.22 102.92 115.58 128.25 140.98 153.79 166.69 179.68 192.75 205.87 219.04 232.22 245.39 258.54 271.63 284.66 297.59 310.42 323.12 335.68 348.09 360.34 372.42 384.32 E(S) •10.89 20.27 30.50 40.83 50.94 60.76 70.31 79,66 88.86 97.98 107.04 116.06 125.05 134.01 142.93 151.81 160.62 169.36 178.02 186.58 195.03 203.36 211.56 219.62 227.54 235.32 242.94 250.41 257.72 264.87 E(T) 12.72 27,24 42.06 56.16 69.19 81.21 92.39 102.96 113.09 122.93 132.58 142.10 151.53 160.90 170.21 179.45 188.62 197.71 206.70 215.58 224.34 232.97 241.45 249.77 257.94 265.94 273.76 281,41 288.88 296.16 MSE(M) 154 526 1176 2134 3405 4982 6857 9019 11459 14164 17121 20314 23722 27325 31098 35015 39049 43174 47363 51589 55827 60053 64243 68378 72439 76407 80268 84008 87617 91084 MSE(C) 88 288 629 1128 1792 2622 3616 4768 6072 7518 9096 10795 12602 14502 16480 18522 20612 22735 24877 27025 29166 31288 33380 35434 37441 39394 41288 43117 44878 46568 MSE(F) 136 462 • 1048 1912 3050 4457 6127 8060 10252 12702 15400 10338 '21502 24874 28434 32161 36030 40017 44096 48242 52432 56640 60844 65024 69160 73234 77229 811.33 84931 88614 MSE(S) 70 . 262 580 1013 1554 2193 2921 3728 4608 5551 6548 7591 8670 9278 10906 12047 13194 14340 15481 16612 17729 18830 • 19912 20976 22019 23044 24050 25039 26013 26975 MSE(T) 183 580 1113 1730 2414 3163 3976 4849 5777 6749 7755 8783 9822 10860 11887 12891 13866 14803 15698 16546 17344 18091 18786 19429 20024 20571 21074 21538 21966 22364 UHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00703 WHAT IS THE DILUTION FACTOR? ?7.5 appendix V INPUT STARTING L, 710,300,10 T E(M) .Il 10 1.000 12.42 20 1.000 26.35 30 1.000 40.93 40 1.000 55.46 50 1.000 69.64 60 1.000 83.45 70 1.000 96.98 80 1.000 110.37 90 1.000 123.74 100 1.000 137.18 H O 1.000 150.74 120 1.000 164.44 130 1.000 178.29 140 1.000 192.28 150 .999 206,38 160 .999 220.57 170 .999 234.82 180 .999 249.09 190 .998 263.35 200 .998 277.57 210 .997 291.73 220 .997 305.79 230 .996 319.73 240 .996 333.54 250 .995 347.18 260 .994 360,66 270 .993 373.94 280 .992 387,02 290 .991 399.89 300 .990 412.54 ♦STOP# OY ES W ENDING L, JUMP SIZE E(C) 9.50 20.15 31.30 42.41 53.25 63.81 74.16 84.40 94 ..62 104.90 115.26 125.74 136.33 147.03 157,81 168.66 179,56 190,47 201.37 212.25 223.07 233.82 244.49 255.04 265.48 275.78 285.93 295.93 305.77 315.45 E(F) 12.03 25.02 38.47 51.88 65.05 77.96 90.69 103.35 116.02 128.77 141.62 154.60 167.69 180.90 194.18 207.53 220.91 234.31 247.68 261.00 274.26 287.44 300.50 313.43 326.22 338.86 351.33 363.62 375.73 387.65 E(S) 10.56 20.31 30.75 41.11 51.14 60.84 70.29 79.59 88.79 97.96 107.12 116.27 125.41 134.54 143.64 152.70 161.69 170.60 179.42 188.13 196.72 205.17 213.49 221.66 229.67 237.53 245.22 252.75 260.12 267.32 E(T) 13.00 27.94 42.82 56.55 68.96 80.27 90.78 100.76 110.40 119.85 129.19 138.46 147.68 156.86 165.99 175.06 184.05 192.94 201.73 210.38 218,90 227.26 235.46 243.48 251.33 258.99 266.47 273.75 280.85 287.75 MSE(M) MSE(C) 155 87 555 301 1262 670 2296 1208 3655 1922 5329 2809 7311 3866 9593 5089 12166 6469 15021 7998 18141 9664 21510 11455 25106 13355 28903 15351 17425 32877 36997 19561 41235 21744 23958 45561 49947 26187 28418 54364 30637 58786 32833 63189 34996 67547 37116 71842 39184 76052 41195 80162 43143 84156 45022 88020 ' 46831 91745 48567 95321 MSE(F) 135 487 1125 2053 3260 4742 6497 8528 10834 13415 16264 19369 22714 26281 30047 33986 38073 42280 46580 50945 55350 59768 64177 68555 72881 77137 81308 85379 89338 93173 MSE(S) 72 276 613 1073 1645 2320 3089 3943 4874 5872 6928 8032 9174 10346 11537 12741 13950 15157 16357 17544 1871619869 21001 22112 23201 24269 25316 26345 27357 28355 MSE(T) 186. 590 1109 1693 2338 3048 3823 4660 5549 6479 7437 8410 9385 10349 11293 12208 13085 13919 14707 15445 16133 16771 17361 17904 18404 18866 19293 19692 20067 20425 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00738 WHAT IS THE DILUTION FACTOR? ?8.0 INPUT STARTING Lr ENDING Lr JUMP SIZE T l O r 300 r10 L 10 20 30 40 50 60 70 80 90 100 HO 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 OO T 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 I. OOP 1.000 1.000 1.000 1.000 1.000 .999 .999 .999 .999 .998 .998 .997 .997 .996 .996 .995 .994 .993 .992 .991 .990 *RTnP* X! H I OY E(M) 12.62 26,92 41.73 56.26 70,30 83.94 97.36 110.72 124.16 137.75 151.52 165.48 179,63 193.93 208.34 222.83 237.37 251.91 266.41 280.86 295,21 309.43 323.51 337.43 351.16 364.70 378.02 391.12 403.99 416.62 E(C) 9.65 20.58 31.91 ■ 43,02 53.76 64.19 74.45 84.66 94.94 105.33 115.86 126.54 137.35 148.29 159.31 170.39 181.50 192.62 203.71 214.76 225.73 236.61 247.38 258.02 268.52 278.87 289.05 299.07 308.91 318.57 E(F) 12.17 25.41 39,03 52.46 65,54 78.34 91.01 103.66 116.40 129.27 142.30 155,48 168.80 182.23 195.74 209.31 222.91 236.49 250.04 263.53 276.93 290.22 303.38 316.40 329.25 341.94 354.44 366.75 378.86 390.76 E(S) 10.35 20.43 31.01 41.33 51.23 60.81 70.18 79.46 88.71 97.97 107.26 11.6.57 125.88 135.19 144.47 153.69 162.85 171,91 180.87 189.70 198,41 206.96 215.37 223.61 231.69 239.60 247.34 254.90 262.30 269.51 E(T) 13.29 28.61 43,39 56.61 68.33 78.96 88.87 98.38 107.66 116.83 125.96 135.06 144.13 153.18 162.17 171.09 179.91 188.62 197.20 205.63 213.89 221.99 229.90 237.62 245.15 252.48 259.61 266.54 273.27 279.80 MSE(M) 158 588 1350 2455 3893 5657 7740 10139 12845 15848 19133 22678 26459 30449 34617 38933 43365 47882 52452 57048 61640 66204 70715 75154 79499 83735 87847 91822 95650 99322 MSE(C) 88 316 713 1290 2049 2990 4108 5398 6852 8462 10213 12092 14084 16171 18337 20563 22834 25132 27442 29750 32043 34308 36535 38716 40842 42906 44904 46832 48686 50466 MSE(F) 136 517 1203 2188 3456 5006 6842 8971 11394 14112 17115 20392 23924 27688 31660 35810 40111 44531 49043 53615 58222 62836 67433 71991 76490 80910 85237 89456 93554 97523 MSE(S) 74 291 646 1130 1731 2441 3249 4149 5129 6181 7294 8456 9659 10891 12143 13406 14674 15937 17192 18433 19656 20858 22038 " 23195 24328 25438 26526 27594 28644 29679 MSE(T) 190 596 1093 1643 2253 2932 3678 4487 5345 6240 7155 8076 8989 9884 10750 11578 12364 13104 13794 14435 15027 15573 16075 16538 16966 17365 17741 18099 18447 18792 WHAT IS N? ?3 APPENDIX V TABLE P WHAT IS THE MIDDLE DILUTION? 7.00774 WHAT IS THE DILUTION FACTOR? ?8.5 INPUT STARTING Lr ENDING Lr JUMP' SIZE ? IO r300 rIO ' L E(M) E(S) T E(C) E(F) 10 1.000 12.83 9.81 10.23 12.31 20 1.000 27.48 21.01 25.81 20.59 30 1.000 42.43 32.44 39.54 31.24 40 1.000 56.88 41.45 43.49 52.91 50 1.000 70.74 54.09 65.87 51.21 60 1.000 84.23 64.40 78.58 60.68 70 1.000 97.58 74.61 91.22 70.01 80 1.000 110.99 84.87 103.93 79.32 90 1.000 124.57 95.25 116.79 88»66 100 1.000 138.37 105.81 129.83 98.05 H O 1.000 152.42 116.55 143.06 107.49 120 1.000 166.69 127.46 156.47 116.97 130 1.000 181.15 138.51 170.02 126.46 140 1.000 195.76 149.69 183.69 135.95 150 .999 210.48 160.94 197.43 145.39 160 .999 225.26 172.24 211.21 154.77 .999 240.06 183.56 225.00 164.07 170 180 .999 254.83 194.86 238.76 173.26 190 .998 269.55 206.11 252.46 182.33 200 .998 284.17 217.29 266.08 191.26 210 .997 298.66 228.37 279.59 200.05 220 .997 313.01 239.34 292.97 208.67 230 .996 327.18 250.18 306.20 217.13 240 .995 341.16 260.87 319.27 225.42 250 .995 354.93 271.40 332.16 233.53 260 .994 368.48 281.76 344.85 241.47 270 .993 381.80 291.94 357.35 249.22 280 .992 394.87 301.94 369.65 256.79 290 .991 407.69 311.74 381.73 264.18 300 .990 420.26 321.35 393.60 271.39 *STOP* OA E(T) 13.61 29.22 43.74 56.33 67.35 77.35 86.78 95.92 104.95 113,94 122.93 131.91 140.88 149.81 158.68 167.45 176.11 184.63 192.99 201.19 209.20 217.02 224.63 232.05 239.25 246.24 253.02 259.60 265.96 272.13 MSE(M) 161 623 1438 2607 4118 5966 8148 10663 13503 16657 20105 23824 27786 31961 36315 40815 45427 50117 54853 59606 64347 69050 73691 78249 82704 87042 91247 95308 99215 102961 MSE(C) 89 332 756 1370 2173 3164 4341 5697 7224 8912 10746 12711 14789 16963 19214 21524 23875 26249 28632 31008 33365 35689 37972 40203 42376 44485 46525 48492 50384 52200 MSE(F) 139 549 1281 2315 3637 5252 7169 9399 11944 14804 17968 21421 25141 29102 33276 37631 42136 46757 51465 56228 61016 65804 70566 75279 79923 84480 88934 93272 97482 101555 MSE(S) 77 305 678 1184 1813 2555 3403 4346 5374 6477 7644 8862 10121 11409 12717 14036 15356 16672 17977 19266 20535 21782 23005 24203 25376 26524 27650 28755 29841 30912 MSE(T) 194 596 1067 1584 2165 2819 3545 4331 5163 6024 6897 7766 8619 9444 10233 10979 11679 12329 12931 13484 13993 14460 14891 15291 15666 16023 16368 16709 17053 17408 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? 7.00809 WHAT IS THE DILUTION FACTOR? ?9.0 INPUT STARTING L, ENDING L, JUMP SIZE 710,300,10 L T E(C) E(F) E(M) E(S) 10 1.000 13.05 9.98 12.46 10.17 20 1.000 21.43 26.19 20.78 28.02 30 1.000 43.02 32.90 39.97 31.41 40 1.000 41.49 57.32 43.83 53.25 50 1.000 70.99 54.29 66 *08 51.11 60 1.000 84.37 64.51 60.50 78.72 70 1.000 91.38 69.84 97.73 74.73 80 1.000 111.25 85.07 104.19 79.22 90 1.000 125.03 88.68 95.61 117.21 100 1.000 139.10 106.37 130.46 98.22 H O 1.000 153.45 117.34 143.92 107.83 120 1.000 168.03 128.49 157.56 117.49 130 1.000 182.81 139.79 171.35 127.15 140 .999 197.72 151.19 185.24 136.80 150 .999 212.73 162.66 199.19 146.39 160 .999 227.77 174.16 213.17 155.91 170 .999 242.80 185.65 227.13 165,33 180 .998 257.77 197.11 241.04 174.63 190 .998 272.66 208.49 254.88 183.80 200 .998 287.42 219.78 268.61 192.81 210 .997 302.03 230.95 282.21 201.66 220 .997 316.46 241.99 295.66 210.33 230 .996 330.69 252.87 308.94 218.83 240 .995 344.71 263,58 322.04 227.15 250 .995 358.49 274.12 334.94 235.28 260 .994 372.02 284.47 347.64 243.22 270 .993 385.31 294.62 360.13 250.97 280 .992 398.33 304.58 372.40 258.53 290 .991 411.08 314.34 384.44 265.91 300 .990 423.57 323.89 396.26 273.10 *STOP* OY W a E(T) 13.94 29.75 43.87 55.79 66*15 75.63 84.68 93.57 102.42 111.30 120.20 ,129.10 137.98 146.81 155.55 164.17 172.66 180.99 189.14 197.10 204.86 212.40 219.73 226.84 233.73 240.39 246.84 253.07 259.10 264.91 MSE(M) 166 660 1524 2751 4330 6259 8540 11173 14149 17454 21066 24958 29098 33453 37988 42664 47448 52304 57199 62101 66982 71816 76579 81251 85811 90246 94541 98686 102671 106489 ' MSE(C) 92 350 800 1448 2292 3332 4566 5987 7587 9351 11267 13315 15479 17737 20071 22461 24889 27338 29790 32232 34650 37033 39370 41652 43873 46027 48110 50119 52051 53906 MSE(F) 142 583 1356 2432 3805 5484 7485 9820 12493 15500 18830 22462 26371 30529 34903 39460 44163 48980 53876 58820 63782 68734 73651 78510 83291 87976 92549 96999 101313 105484 MSE(S) 80 319 708 1236 1891 2666 3551 4537 5613 6767 7986 9259 10572 11916 13278 14650 16022 17388 18742 20078 21393 22685 23951 25191 26405 27594 ' 28759 29903 31027 32136 MSE(T) 199 592 1034 1523 2081 2719 3430 4199 5007 5837 6669 7488 8283 9043 9760 10430 11052 11624 12149 12630 13071 13477 13855 14212 14554 14889 15225 15570 15931 16316 WHAT IS N? ?3 WHAT IS THE MIDDLE DILUTION? ?.00844 WHAT IS THE DILUTION FACTOR? ?9.5 INPUT STARTING Lr ?10 r300 T10 L T E(M) 10 1.000 13.28 20 1,000 28.53 30 1.000 43.50 40 1.000 57.60 50 1.000 71.10 60 1.000 84.42 70 1.000 97.86 80 1.000 111.56 90 1.000 125.59 100 1.000 139.96 H O 1.000 154.62 120 1.000 169.52 130 1.000 184.60 140 .999 199.80 150 .999 215.06 160 .999 230.33 170 .999 245.56 180 .998 260.71 190 .998 275.73 200 .998 290.60 210 .997 305.29 220 .997 319.77 230 .996 334.02 240 .995 348.04 250 .995 361.79 260 .994 375.29 270 .993 388.51 280 .992 401.45 290 .991 414.12 300 .990 426.51 APPENDIX V TABLE R JtSTOP* OY ENDING Lr JUMP SIZE E(C) 10.16 21.81 33.26 44.04 54.37 64.56 74.83 85.30 96.*04 107.02 118.23 129.62 141.15 152.78 164.45 176.12 187.77 199.35 210,84 222.21 233,44 244.51 255.41 266.13 276.65 286.96 297.07 306.97 316»66 326.13 E(F) 12.62 26.56 40.33 53.47 66.20 78.82 91.54 104.49 117.71 131.17 144.87 158,75 172.76 186.87 201.02 215.17 229.29 243.33 257.28 271.10 284.77 298,27 3 1 1 ;58 324.69 337.59 350.27 362.73 374.95 386.94 398.70 E(S) 10.17 20.96 31.53 41.45 50.95 60.31 69.69 79.17 88.78 98.48 108.27 118.10 127.92 137.72 147.45 157.09 166.62 176.00 185.24 194.31 203.20 211.90 220,42 228.74 236.87 244.80 252.53 260,07 267.42 274.58 E(T) 14,28 30.18 43,80 55.03 64.79 73.84 82.61 91.33 100.08 108.89 117.72 126.56 135.35 144.08 152.69 161.17 169.48 177.61 185.55 193.26 200.76 208.03 215.07 221.88 228.45 234.80 240.92 246.83 252.52 258.00 MSE(M) 172 697 1607 288.7 4530 6540 8922 11674 14788 18244 22018 26080 30393 34922 39627 44471 49415 54424 59464 64502 69509 74460 79331 84101 88753 93272 97644 101860 105912 109793 MSE(C) 94 368 844 1523 2407 3495 4786 6271 7942 9783 11777 13907 16152 18491 20903 23370 25870 28387 30905 33407 35882 38317 40703 43032 45296 47491 49613 51660 53629 55520 MSE(F) 148 618 1426 2540 3961 5706 7795 10241 13047 16207 19705 23518 27617 31969 36539 41289 46183 51184 56257 61369 66490 71591 76647 81635 86536 91332 96009 100553 104956 109209 MSE(S) 83 332 737 1285 1967 2773 3695 4723 5845 7048 8319 9644 11010 12405 13819 15241 16663 18076 19476 20857 22216 ' 23549 24857 26137 27391 28619 29823 31005 32168 33315 MSE(T) 203 583 997 1462 2005 2632 3331 4084 4870 5667 6459 7229 7966 8663 9312 9913 10464 10967 11426 11846 12232 12592 12932 13262 13588 13919 14263 14628 15023 15455 WHAT IS N? ?3 UHAT IS THE MIDDLE DILUTION? 7.00880 WHAT IS THE DILUTION FACTOR? 710.0 INPUT STARTING L, ENDING Lr JUMP SIZE 710,300,10 L T E(M) E(C) E(F) E(S) 10 1.000 13.53 10.34 12.79 10.21 20 1.000 28.99 21.13 22.17 26.90 30 1.000 43.86 33.54 40.61 31.58 40 1.000 57.74 41.34 44.15 53.61 50 1.000 71.11 54.38 66.25 50.75 60 1.000 84.44 64.57 78.88 60.12 70 1.000 98.01 74.94 91.72 69.58 80 1.000 111.94 85.60 104.85 79.19 90 1.000 126.27 . 96.55 118.28 88.96 100 1.000 140.95 107.78 131.98 98.84 H O 1.000 155.92 119.23 145.91 108.80 120 1.000 171.13 130.86 160.02 118.78 130 1.000 186.50 142.61 174.26 128.76 .999 201.96 154.43 188.57 138.69 140 150 .999 217.46 166.28 202.90 148.54 160 .999 232.93 178.11 217.21 158.28 170 .999 248.32 189.88 231.46 167.89 180 .998 263.60 201.57 245,62 177.34 190 .998 278.73 213.13 259.66 186.62 200 .998 293.67 224.56 273.55 195.72 210 .997 308.40 235.82 287.26 204.63 220 .997 322.89 246.90 300,78 213.34 230 .996 337.14 257.79 314.10 221.85 240 .995 351.11 268.48 327.20 230.16 250 .995 364.81 278.96 340.08 238.26 260 .994 378.23 289.22 352.71 246.16 270 .993 391.36 299.26 365,12 253.85 280 .992 404.20 309.07 377.28 261.35 290 .991 416.75 318.67 389.20 268.65 300 .990 429.01 328.04 400.87 275.76 *STOP* or > % H CO g M M kJ SI E(T) 14.62 30.50 43.52 54.08 63.33 72.04 80.62 89.23 97.92 106.68 115.46 124.24 132.95 141.57 150.05 158.36 166.49 174.41 182.11 189.58 196.81 203.80 210.55 217.05 223.31 229.35 235.15 240.73 246.09 251.25 MSE(M) 179 735 1686 3014 ' 4720 6812 9297 12171 15423 19030 22964 27189 31668 36361 41225 46222 51312 56456 61622 66776 71889 76935 81892 86740 91461 96042 100470 104736 108834 112758 MSE(C) 97 387 886 1596 2518 3655 5001 6551 8291 10207 12279 14486 16808 19223 21708 24244 26810 29388 31961 34516 37038 39517 41943 44308 46607 48835 50988 53064 55063 56984 MSE(F) 154 652 1491 2640 4109 5923 8105 10667 13612 16928 20597 24591 28877 33418 38176 43110 48181 53351 58583 63845 69103 74332 79504 84598 89595 94477 99232 103848 108315 112627 MSE(S) 87 346 765 1333 2039 2876 3835 4904 6071 7321 8640 10014 11429 12873 14334 15802 17268 18725 20166 21587 22985 24357 25701 27018 28308 29572 30813 32031 33230 34413 MSE(T) 206 570 957 1403 1936 2555 3245 3983 4744 5508 6257 6977 7657 8292 8877 9412 9898 10339 10742 11111 11454 11780 12097 12413 12738 13080 13448 13850 14295 14789 103 APPENDIX VI C C C C C C C C C C PROGRAM TO GENERATE EXACT SAMPLING DISTRIBUTIONS FOR LAMBDA FROM I TO 100 FOR N TUBES AT EACH OF 3 DILUTIONS FOR THE FINITE POPULATION MODEL (I.E., N(Z1+Z2+Z3).LE.l IS NECESSARY) A(*,J) IS THE BINOMIAL COEFFCIIENT FOR X(J) ITEMS * AT A TIME D(A) IS THE BINOMIAL COEFFCIEINT FOR N ITEMS * AT A TIME X IS THE NUMBER OF FERTILE TUBES Z IS THE DILUTION AMAT SAVES THE VALUES FOR OUTPUT A PAGE AT A TIME (10 LAMBDA VALUES BY 64 TUBE COMBINATIONS) DIMENSION A(0:10,3),D(O=IO),X(3),Z(3),AMAT(66,40) OUTPUT 'INPUT THE 3 Z VALUES' INPUT Z(1),Z(2),Z(3) OUTPUT 'INPUT N (// TUBES PER Z)' INPUT N S=N* (Z (I)+Z (2)+Z (3) ) D(O)=I.0 DO 5 I=IsN-I 5 D(I+1)=D(I)*(N-I)/(1+1) L=I 9 DO 60 IM=I,40,4 IF (L>100) GO TO 99 AMAT(IsIM)=L C=O KOUNT=Z DO 40 Xl=OsN DO 40 XZ=OsN DO 40 X3=0,N X(I)=Xl X(Z)=XZ X(3)=X3 SX=X1+X2+X3 F=O IF (SX>L) GO TO 35 CN = D(X1)*D(X2)*D(X3) DO 10 1=1,3 A(OsI)=I.0 IF (X(I).EQ.O) GO TO 10 A(OsI)=I.0 DO 10 J=OsX(I)-I A(J+1,1)=A(JsI) * (X(I)-J)/(J+l) 10 CONTINUE 104 APPENDIX VI (CONTINUED) 30 35 40 60 200 70 . 300 400 99 DO 30 I=O5X(I) DO 30 I=O5X(Z) DO 30 I=O5X(S) B = (-!)**(SX-I-J-K)*A(I,I)*A(J ,2)*A(K,3) C *(1-S+I*Z(1)+J*Z(2)+K*Z(3))**L F=F+B F=CNaF AMAT(KOUNT5IM)=Xl AMAT(KOUNT,IM+1)=X2 AMAT (KOUNT,IMf 2) =X3 AMAT(KOUNT,IM+3)=F KOUNT=KOUNT+l C=C+F CONTINUE AMAT(66,IM)=C L=L+1 CONTINUE WRITE (108,200) AMAT(I5I),AMAT(I5S),AMAT(I5O)5 C AMAT(1,13) , A M A T d 517) ,AMAT(I5Zl) ,AMAT(I5ZS) , C AMAT(1529) 5AMAT(1533),AMAT(1537) FORMAT (T75I3,9(9X5I3)) DO 70 1=2,65 WRITE (108,300) (AMAT(I5J),1=1,40) FORMAT (X510(2X53I1,F7.4)) WRITE (108,400) AMAT(66,1),AMAT(66,5),AMAT(66,9), C AMAT(66,13)5AMAT(66,17)5AMAT(66,21)5AMAT(66,25), C AMAT(66,29),AMAT(66,33),AMAT(66,37) FORMAT (T7,F6.4,9(6X,F6.4)) GO TO 9 END 105 APPENDIX VII C C C C C C C C C C C C C C C C C PROGRAM TO GIVE THE POSTERIOR FUNCTION OF LAMBDA GIVEN X1,X2,X3 UNDER AN IMPROPER UNIFORM PRIOR THE PROGRAM CALCULATES THE EXACT SUM OF THE POSTERIOR PROBABILITIES FROM (X1+X2+X3) TO INFINITY AND THE EXACT MEAN OF THE POSTERIOR DISTRIBUTION FOR EACH VALUE OF LAMBDA, THE PROGRAM OUTPUTS THE PROBABILITY, THE CUMULATIVE PROBABILITY AND THE CUMULATIVE RELATIVE PROBABILITY FOR QUICK DETERMINATION OF CONFIDENCE INTERVAL ENDPOINTS FOR ANY ALPHA THIS PROGRAM IS FOR THE FINITE POPULATION MODEL ********** A(*,J) IS THE BINOMIAL COEFFICIENT FOR X(J) ITEMS * AT A TIME D(*) IS THE BINOMIAL COEFFICIENT FOR N ITEMS * AT A TIME X IS THE NUMBER OF FERTILE TUBES OBSERVED Z IS THE DILUTION 2 150 C C C C DIMENSION A(0:10,3),D(OrlO),X(3),Z(3) WRITE (1,150) FORMAT (IHl) THE PRECEDING 2 LINES START THE OUTPUT FOR EACH INPUT X1,X2,X3 ON A NEW PAGE 5 REAL M OUTPUT 'INPUT THE 3 Z VALUES (DILUTIONS)' INPUT Z(1),Z(2),Z(3) OUTPUT 'INPUT N (// TUBES PER Z)' INPUT N OUTPUT 'INPUT THE 3 X VALUES (# FERTILE RESPONSES PER Z)' INPUT X(1),X(2),X(3) S=N*(Z(1)+Z(2)+Z(3)) SX=X(1)+X(2)+X(3) D(O)=I.0 DO 5 1=0,N-I D(I+1)=D(I)* (N-I)/(1+1) CN=D(X(I))*D(X(2))*D(X(3)) DO 10 1=1,3 A(O1I)=I.0 IF (X(I).EQ.O) GO TO 10 DO 10 J=I1X(I) A(J1I)=I-O 106 APPENDIX VII (CONTINUED) DO 10 K=O5J-I P=(X(I)-K)/(K+l) A(J5I)=A(J5I)AP 10 CONTINUE OUTPUT 'TOTAL L-FN IS' T=O DO 20 I=O5X(I) DO 20 J=0,X(2) . DO 20 K=O5X(J) B=(-1)AA(SX-I-J-K)AA(I5D *A(J ,2)AA(K5J) C *(1-S+I*Z(1)+J*Z(2)+K*Z(J))*ASX C /(S-I*Z(I)-JAZ(2)-RAZ(J)) 20 T=TJB T=CNaT OUTPUT T OUTPUT 'MEAN IS' M=O DO 25 I=O5X(I) DO 25 J=O5X(Z) DO 25 K=O5X(J) B=(-1)A*(sx-I-J-K)*A(I,I)*A(J ,2)AA(K5J) C *(1-S+I*Z(I)+JAZ(2)+K*Z(J))**(SX-1) C /(S-I*Z(1)-J*Z(2)-K*Z(J))**2 25 M=MJB • M=CN*M M=SXJM/T OUTPUT M ■ OUTPUT 'LAMBDA L-FN CUM L-FN C=O •■ R=O ' ■ DO 40 L=SX5400 F=O DO JO I=O5X(I) DO JO J=O5X(Z) DO JO K=O5X(J) B=(-1)AA(SX-I-J-K)*A(I51)*A(J,2)*A(K,J) C *(1-SJI*Z(1)JJ*Z(2)JK*Z(J))*AL JO F=FJB F=CNAF C=CJF R=C/T WRITE (108,100) L 5F 5C 5R CUM REL 107 APPENDIX VII (CONTINUED) 40 100 200 IF (R>0.995) GO TO 200 CONTINUE FORMAT (I4,5X,E12.5,4X,E12.5,4X,E12.5) GO TO 2 END 108 APPENDIX VIII To verify statements (i) and (ii) of section 5.2, one needs the following fact. (I) L L j_(l_x)_ dx = £ (^) (1-x)k + ln(x) + c x k=l k proof: y i W dx = -/(1-x)^ ^dx + /-— .L-I X-^-- dx -/(1-x)^ ^dx - /(1-x)^ ^dx -...+ / ~ ~ ~ " dx -/(1-x)^ ^dx - /(1-x)^ ^dx -...+ / ( " I ) (1-x)dx -/(1-x)^ ^dx - /(1-x)^ ^dx /(1-x)dx + /~dx - /dx = 2 (1-x)^ + ln(x) - x + C1 Jj = Z (y1) (l-x)k + ln(x) + c k=l k In the serial dilution problem with z^=(l/d)^ ^z1, the z's will be equally spaced on a log scale. Letting F(z) = P(sterile response at dilution z), which is F(z)=l-(l-z)^ for the finite population model and F(z) = 1-e for the infinite population model, the serial dilution problem may be illustrated as follows. ln(z) ln(d) 109 APPENDIX VIII (CONTINUED) The Spearman (1908) estimate for the mean of F(x) is (2) y = I n ( Z 1) + [ln(d)][.5-EX/n], and the exact mean is given by (3) = /0 [ln(z)]d[F(z)] = /q [ln(z)]X(l-z)^ 1dz = lim{/^[ln(z)]X(l-z)^ ^dz) a-^-0 3 X ]dz} lim{-[ln(z)] [I-Zix I1 + f1 a+0 a * lim{-[ln(z)] [l-z]^| ^ a-)-0 X (l-z)k |^ + ln(z) |^ by (I) ■ = -Y-In(X) , for large X Combining (2) and (3), one obtains ^ = e -y-ln(z1)+[ln(d)] [(ZX/n)-.5] the same value obtained by Johnson and Brown (1971) for the infinite population model. This verifies statement (i) of section 5.2. To verify statement (ii) of section 5.2, consider a single dilution z of the finite population model and let X=EV^, where V^=I if the Ith sample is fertile and V.=0 otherwise. Note that V is a 1 X 1 binomial random variable with n=l and p=P(V^=I)=1-(1-z) . If there are n samples at dilution z, E(X) = E(EV^) = n[l-(l-z) ]. no. A P P E N D I X VIII (CONTINUED) For several dilutions, E(X.X.) = E(EV1ZV1) = EEE(V1V 1) ij i 1J 3 ij 1 J = Hi^CP(Vi=I) ■+ P(Vj=I) + P (Vi=O and Vj=O) -l] = n . n . C l - d - z J ^ - d - z j V d - z -z )^] 1 J 1 J 1 J and one observes that COV(X1X 1) = E(X1X 1) - E(X1)E(X1) 1 J 1 1 J 1 J = n.n.Cl-d-z. )^-(l-z .)^+d-z -z )^] 1 J 1 J - HiCl-(I-Zi) 1 J [I-(1-zJ = n.n.C(I-Z1- Z 1)^-C(I-Z)(I-Z)]^). 1 J 1 J 1 J Since (I-Z1)(I-Z1) = l-z.-z.+z.z. > l-z.-z., the correlation 1 J 1 J 1 J between Xi and Xj is, as expected, negative. 1 J Since z^zy is very close to zero when Zi and Zj are small, however* Xi and Xj are essentially independent whenever only a small portion of the population is sampled. This approximate independence allows one to mimic Johnson and Brown's derivation of a variance for y. Letting p=X/n for each dilution, p = ln(zi)+Cln(d) ]'C .5-Ep] and Var(p) = Cln(d)I2Var(Ep) = Cln(d)]2EVar(p) , if the p's are independent = Cln(d)]2Ep(1-p)/n = ^-Ep(l-p)ln(d) ^ M d l / 0 [ F(z)][1_F (,z)]dCln(z)] n I Ill APPENDIX VIII (CONTINUED) ^ ^ - / ^ [ l - ( l - z ) X][ (l-z)X]^dz n U z 2A ln(d) J rI r O ^ l ]dz _ n . z ]dz} 2A i£? i{^ 1(E) a 'z>k|o + X I 2A " UEl(|) (I-Z)k I2, - I-(Z) IJ) I ^-kiPE)+ k:i(E)] ln(d) [-In(A) + ln(2A)] , for large A [ln(d)][ln(2)] Finally, note that when A is large and the portion of the population sampled is small, E(%) = E(e-7-0) E [e-(Y+y)-(y-y)] AE[e"(°-y)] - i A[l + E(P-U) + AU + [ln(d)][ln(2)] } , since y is unbiased This gives [2n]/{2n+[ln(d)][ln(2)]} as the appropriate multiplicative bias correction for X and verifies statement (ii) of section 5.2. 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Thomas, Harold A., Jr. (1942), "Bacterial Densities from Fermentation Tube Results," Journal of the American Water Works Association, 34:572-576. 1 (1955), "Statistical Analysis of Coliform Data," Sewage and Industrial Wastes, 27:212-222. 117 ______ and Woodward, Richard L. (1955), "Estimation of Coliform Density by the Membrane Filter and the Fermentation Tube Methods," American Journal of Public Health, 45:1431-1437. von Mises, R. (1942), "On the Correct Use of Bayes' Formula," Annals of Mathematical Statistics, 12:156-165. Wolman, A., and Weaver, H.L. (1917), "A Modification of the McCrady Method of the Numerical Interpretation of Fermentation-Tube Results," Journal of Infectious Diseases, 21:287-291. Woodward, Richard L. (1957), "How Probable is the Most Probable Number," Journal of the American Water Works Association, 49:1060-1068. MONTANA STATE UNIVERSITY LIBRARIES stks 0378.L957@Theses Using a serial dilution experiment to es RL llllllllllllllllllllll 3 1762 00176457 8 L 15 7