L.20-G.Biology Mycology D.Ibtihal Muiz PLANT DISEASE EPIDEMIOLOGY When a pathogen spreads to and affects many individuals within a population over a relatively large area and within a relatively short time , the phenomenon is called an epidemic . An epidemic and has been defined as any increase of disease in a population . The study of epidemics , sometimes called epiphytotics , occur annually on most crops in many parts of the world . Most epidemics are more less localized and cause minor to moderate losses because they are kept in check either naturally or by chemical sprays and other control measures . The Elements of an Epidemic Plant disease epidemics develop as result of the timely combination of the same elements that result in plant disease : susceptible host plant , a virulent pathogen , and favorable environmental conditions over a fairly long period of time . In addition , however , through their activities humans may unwittingly help to initiate and develop epidemics , or instead may effectively stop the initiation and development of epidemics under situations in which they would almost certainly certainly occur without human intervention . Thus , the chance of an epidemic increases when the susceptibility of the host and virulence of the pathogen are greater , as the environmental conditions approach the optimum level for pathogen growth , reproduction , and spread , and as the duration of all favorable combinations is prolonged , provided no human intervention occurs to reduce or stop the epidemic . For the purpose of describing the interaction of the components of plant disease epidemics , the disease triangle that was discussed in Chapter 2 and used to describe the interaction of the components of plant disease can be expanded to include time and humans . The amount of each of the three components of plant disease , as well as their effect on each other and , therefore , on the development of disease , are affected by a fourth 1 component : time . Both the specific point in time at which a particular event in disease development occurs and the length of time during which the event takes place affect the amount of disease . The interaction of the four components can be visualized as a tetrahedron , or pyramid , in which each plane represents one of the components . This figure is referred to as the disease tetrahedron or disease pyramid ( Figure 8 – 1 ) . The effect of time on disease development becomes apparent when one considers the importance of the time of year ( that is , the climatic conditions and stage of growth when host and pathogen may coexist ) , the duration and frequency or favorable temperature and rains , the time of appearance of the vector , the duration of the cycle of a particular disease , the earliness or maturity of the host , etc . If the four components of the disease tetrahedron could be quantified , the volume of the tetrahedron would be proportional to the amount of disease on a plant or in a plant population . Disease development in cultivated plants is also greatly influenced by a fifth component : humans . Humans affect the kind of plants grows in a given area , their degree of resistance , the numbers planted , time of planting , and density of the plants . By the resistance of the particular plants they cultivate , humans also determine which pathogens and pathogen races will predominate . In the schematic diagram in Figure 8 - 2 , host pathogen , and environment are each represented by one of the sides of the triangle , time is represented as the perpendicular line arising from the center of the triangle and humans as the peak of the tetrahedron whose base is the triangle and height is the length of time . In this way , humans interact with and influence each of the 2 other four components of an epidemic and thereby increase or decrease the magnitude of the epidemic . Sometimes , of course , humans themselves can be affected to a greater or lesser extent by plant disease epidemics . Host Factors that Affect Development of Epidemics Several internal and external factors of particular host plants play an important role in the development of epidemics involving those hosts . Levels of genetic Resistance or Susceptibility of the Host Obviously , host plants carrying high levels of ( vertical ) resistance do not allow a pathogen to become established in them and thus no epidemic can develop , unless and until a new pathogen race appears that can attack that resistance and the host then becomes susceptible . Host plants carrying lower levels of ( horizontal ) resistance will probably become infected , but the rate at which the disease and the epidemic will develop depends on the level of resistance and the environmental conditions . Susceptible host plants lacking genes for resistance against the pathogen provide the ideal substrate for establishment and development of new infections and , in the presence of a virulent pathogen and favorable environment , favor the development of disease epidemics . plant parts are actually quite resistant to infection while still very young , become more susceptible later in their growth , and then become resistant again before they are fully expanded ( Figure 8 - 3 , Ib ) . In other diseases , such as infections of blossoms or fruit by Botrytis , Penicillium ,Monilinia , and Glomerella , and in all postharvest infections , plant parts ( that is , fruit ) are resistant during growth and the arly adult period but become susceptible near ripening ( Figure 8 - 3 , II ) . In still other diseases , such as potato late blight ( caused by Phytopthora infestans )and tomato early blight ( caused by Alternaria solani ) , a stage of juvenile susceptibility during the growth period of the plant is followed by a period or relative resistance in the early adult stage and then susceptibility after maturity ( Figure 8-3 , III) . Apparently then , depending on the particular host-pathogen combination , the age of host plant at the time of arrival of the pathogen may affect considerably the development of infection and of an epidemic . Pathogen Factors That Affect Development of Epidemics 1. Levels of Virulence Virulent pathogens capable of rapidly infecting the host ensure faster production of larger amounts of inoculum than pathogens of lesser virulence . 2. Quantity of Inoculum Near Hosts The greater the number of pathogen propagules ( spores , sclerotia , eggs , etc ) , within or near fields of host plants , the 3 more incoulum reaches the hosts and at an earlies time , greatly increasing the chances of an epidemic . 3. Type of Reproduction of the Pathogen All pathogens produce many offspring but some of them , such as most fungi , bacteria , and viruses , produce incomparably more offspring than others .A few fungi and all nematodes and parasitic plants produce relatively small numbers of offspring . Even more important is the fact that some pathogens ( most fungi , bacteria , and viruses ) have short reproduction cycles and therefore can produce many reproductive cycles ( generations ) in a single growing season . These are the polycyclic pathogen that usually cause rusts , mildews , and leaf spots , and are responsible for most of the sudden , catastrophic plant disease epidemic in the world . 4. Ecology of the Pathogen Some pathogens , such as most fungi and parasitic higher plants , produce their inoculum ( spores and seeds , respectively ) on the surface of the aerial parts of the host . From there , spores and seeds can be dispersed with ease over a range of distances and can cause widespread epidemics . Other pathogens , such as vascular fungi and bacteria , mycoplasmas , viruses , and protozoa , reproduce inside the plant .In this case , spread of the pathogen is rare or impossible without the help of vectors , and therefore such pathogens can cause epidemics only when vectors are plentiful and active . Still other pathogens , such as soilborne fungi , bacteria , and nematodes , produce their inoculum on infected plant parts in the soil , within which the inoculum disperses slowly , if at all , and presents little danger for sudden or widespread epidemics . 5. Mode of Spread of the Pathogen The spores of many plant pathogenic fungi , such as those causing rusts , mildews , and leaf spots , are released into the air and can be dispersed by air breezes or strong winds over variable distances up to several miles . These kinds of fungi are responsible for the most frequent and most widespread epidemics . In terms of their ability to cause sudden and widespread epidemics , the next most important group of pathogens includes those whose inoculum is carried by airborne vectors . Such pathogens are many of the viruses 4 transmitted by aphids and some other insects ; mycoplasmas and fastidious bacteria transmitted by leafhoppers , planthoppers , and psyllids ; and some fungi (such as the cause of Dutch elm disease ) , bacteria ( such as the cause of bacterial wilt of cucurbits ) , and even nematodes ( such as the cause of pine wilt disease ) disseminated primarily by beetles . Pathogens that are transmitted by wind-blown rain ( primarily fungi causing diseases like anthracnoses and apple scab , and most bacteria ) are almost annually responsible for severe but somewhat localized epidemics within a field , a township , or a valley . Pathogens carried with the seed or other vegetative propagative organs ( such as tubers or bulbs ) are often placed in the midst of susceptible plants , but their ability to cause epidemics depends on the effectiveness of their subsequent through the soil , because of the physical restrictions , are generally unable to cause sudden or widespread epidemics but often cause local , slow-spreading diseases of considerable severity . Measurement of plant Disease When measuring disease , one is interested in measuring ( I ) the incidence of the disease , that is , the number or proportion of plant units diseased ( the number or proportion of plants , leaves , stems , and fruit that show any symptoms ) ; (2) the severity of the disease , that is , the proportion of area or amount of plant tissue that is disease ; and (3) the yield loss caused by the disease , that is , the proportion of the yield that the grower will not be able to harvest because the disease destroyed it directly or prevented the plants from producing it . The Structure of Epidemics Epidemics develop as a consequence of the interactions of the populations of their two components , hosts and pathogens , as influenced by environmental and human interference over time . The interactions of hosts and pathogens produce the third component , disease . Each of these primary components of epidemics consists of subcomponents . The host may be an annual , a perennial , or a tree ; it goes through certain growth stages ( seedling , tillering , blossoming ) ; it is propagated by seed , or vegetatively ; it may be resistant or susceptible ; it may react by producing lesions or a blight . The subcomponents of the pathogen include pathogenicity ( biotroph, necrotroph , toxins, mode of penetration ) ; virulence ( varietal specialization or race ) ; sporulation ( kind and amount of inoculum ) ; 5 dispersal ( growth , by wind , water , vectors ) ; and survival ( duration , form ) . The subcomponents of disease include infection ( number of lesions , systemic ) ; pathogenesis ( presence and length of incubation period ) ; lesion formation ( size , rate , toxins ) ; infectiousness ( time and amount of sporulation , amount of new inoculum ) ; spread ( infection gradient in host population ) ; multiplication ( length of infection cycle , duration and /or number of generations per season ) ; and survival ( longevity in months or years ) . As we increase our knowledge of the subcomponents of each epidemic, we also increase our ability to predict the pattern of individual epidemics and to interfere at the most appropriate stage of the epidemic with more efficient and more dependable methods of control . 6