ab176724 NADP/NADPH Assay Kit (Fluorometric) Instructions for Use For monitoring NADP/NADPH activity in cell and tissue extracts. This product is for research use only and is not intended for diagnostic use. Version: 4 Last Updated: 18 March 2015 Table of Contents 1. Overview 2 2. Protocol Summary 5 3. Kit Components 6 4. Storage and Stability 7 5. Materials Required, Not Supplied 7 6. Assay Protocol 8 7. Data Analysis 14 8. Troubleshooting 16 1 1. Overview Nicotinamide adenine dinucleotide (NAD+) and nicotinamide adenine dinucleotide phosphate (NADP+) are two important cofactors found in cells. NADH is the reduced form of NAD+, and NAD+ is the oxidized form of NADH. NAD forms NADP with the addition of a phosphate group to the 2' position of the adenyl nucleotide through an ester linkage. NADP is used in anabolic biological reactions, such as fatty acid and nucleic acid synthesis, which require NADPH as a reducing agent. In chloroplasts, NADP is an oxidizing agent important in the preliminary reactions of photosynthesis. The NADPH produced by photosynthesis is used as reducing power for the biosynthetic reactions in the Calvin cycle of photosynthesis. The traditional NAD/NADH and NADP/NADPH assays are done by monitoring the changes in NADH or NADPH absorption at 340 nm. These methods suffer low sensitivity and high interference since the assays are done in the UV range that requires expensive quartz microplates. The low sensitivity of the absorption-based NADP/NADPH assays makes the assays difficult to be automated for high throughput screening that often uses small sample size. 2 Abcam's NADP/NADPH Assay Kit (Fluorometric) (ab176724) provides a convenient method for sensitive detection of NADP, NADPH and their ratio. The enzymes in the system specifically recognize NADP/NADPH in an enzyme recycling reaction that significantly increases detection sensitivity. In addition, this assay has very low background since it is run in the red visible range that considerably reduces the sample interference. The assay can be performed in a convenient 96-well or 384-well microtiter-plate format. Its signal can be easily read by either a fluorescence microplate reader at Ex/Em = 530-570/590-600 nm (maximum Ex/Em = 540/590 nm) or an absorbance microplate reader at ~576 nm. This also provides NADP, NADPH extraction buffer, and cell lysis buffer. 3 Kit Key Features Broad Application – can be used for quantifying NADP/NADPH in solutions and in cell extracts Sensitive – detect as low as 10 picomoles of NADP/NADPH in solution Continuous – suitable for both manual and automated operations without a mixing or separation step Convenient – formulated to have minimal hands-on-time Non-radioactive – no special requirements for waste treatment 4 2. Protocol Summary Prepare NADPH standards and/or test samples Add NADPH or NADP Extraction Solution Incubate at RT for 15 min Add NADP or NADPH Extraction Solution Add NADP/NADPH reaction mixture Incubate at RT for 15 min to 2 hours Monitor fluorescence intensity at Ex/Em =540/590 nm 5 3. Kit Components Item Quantity Storage upon arrival Storage after use/ reconstitution NADP/NADPH Recycling Enzyme 2 bottles -20°C -20°C NADPH Sensor Buffer 20 mL -20°C -20°C NADPH Standard (167 µg) 1 vial -20°C -20°C NADPH Extraction Solution 10 mL -20°C -20°C NADP Extraction Solution 10 mL -20°C -20°C NADP/NADPH Control Solution 10 mL -20°C -20°C NADP/NADPH Lysis Buffer 10 mL -20°C -20°C Mixture (lyophilized powder) 6 4. Storage and Stability Upon arrival, store the kit at-20°C and protected from light. Please read the entire protocol before performing the assay. Avoid repeated freeze/thaw cycles. Warm all buffers to room temperature before use. Briefly centrifuge all small vials prior to opening. 5. Materials Required, Not Supplied 96 or 384-well solid black plate 96 or 384-well white clear bottom plate Multi-well spectrophotometer (ELISA reader) Distilled water (ddH2O) or MilliQ PBS 7 6. Assay Protocol 1. Reagent Preparation a) NADPH Stock Solution: Add 200 µL of PBS buffer into the vial of NADPH standard to have 1 mM (1 nmol/µL) NADPH stock solution. NOTE: The unused NADPH stock solution should be divided into single use aliquots and stored at -20oC. b) NADP/NADPH reaction mixture: Add 10 mL of NADPH Sensor Buffer to the bottle of NADP/NADPH Recycling Enzyme Mixture and mix well. NOTE: This NADP/NADPH reaction mixture is enough for two 96-well plates. The unused NADP/NADPH reaction mixture should be divided into single use aliquots and stored at -20oC. 2. Sample preparation a) For lysis of plant cells: Homogenize the leave with the lysis buffer at 200 mg/mL, and then centrifuge at 2500 rpm for 5-10 minutes, use the supernatant for the assay. Lyse cells by resuspending them in 1 mL ice cold lysis buffer and pipetting up and down. Incubate on ice for 5 min. Centrifuge samples at maximum speed for 10 min in a cold centrifuge and collect supernatant. 8 b) For lysis of bacterial cells: Collecting bacterial cells by centrifugation (10,000 x g, 0°C, 15 min). Use about 100 to 10 million cells/mL lysis buffer, leave at room temperature for 15 minutes. Centrifuge at 2500 rpm for 5 minutes, and then use the supernatant for the assay. c) For lysis of mammalian cells: Simply remove medium from the plates (wells), use about 100 uL lysis buffer per 1-5 million cells (or 100uL/ well in a 96-well cell culture plate), and leave at room temperature for 15 minutes. You can use the cell lysate directly or simply centrifuge at 1500 rpm for 5 minutes, use the supernatant for the assay. d) For lysis of tissues: Weigh ~20 mg tissue, wash with cold PBS, homogenize with 400 μL of lysis buffer in a micro-centrifuge tube, and then centrifuge at 2500 rpm for 5-10 minutes, use the supernatant for the assay. 3. Standard Curve Preparation: a) Add 10 µL of 1 mM NADPH stock solution (from Step 1a) into 990 µL PBS buffer (pH 7.4) to generate 10 µM (10 pmols/µL) NADPH standard solution. NOTE: Diluted NADPH standard solution is unstable, and should be used within 4 hours. 9 b) Take 200 µL of 10 µM NADPH standard solution (from Step 3a) and perform 1:3 serial dilutions in PBS to get 3.3, 1.1, 0.37, 0.12, 0.04, 0.014 and 0 µM serially diluted NADPH standards. c) Add serially diluted NADPH standards and/or NADP/NADPH containing test samples into a solid black 96-well microplate, as described in the tables below. NOTE: Prepare cells or tissue samples as desired. NADP/NADPH Lysis Buffer can be used for lysing the cells for convenience. d) For NADPH Extraction (NADPH): Add 25 μL of NADPH Extraction Solution into the wells of NADP/NADPH containing test samples. Incubate at room temperature for 10 to 15 minutes, then, add 25 μL of NADP Extraction Solution to neutralize the NADPH extracts, as described in the tables. e) For NADP Extraction (NADP): Add 25 μL of NADP Extraction Solution into the wells of NADP/NADPH containing test samples. Incubate at room temperature for 10 to 15 minutes, then, add 25 μL of NADPH Extraction Solution to neutralize the NADP extracts, as described in the tables. f) For Total NADP and NADPH: Add 25 μL of NADP/NADPH Control Solution into the wells of NADPH standards and NADP/NADPH containing test samples. Incubate at room 10 temperature for 10 to 15 minutes, and then add 25 μL of Control Solution, as described in the tables. NOTE: Prepare cells or tissue samples as desired. NADP/NADPH Lysis Buffer can be used for lysing the cells for convenience. BL NS 1 NS 2 NS 3 NS 4 NS 5 NS 6 NS 7 NOTE: BL TS TS TS (NADPH) …. TS (NADPH) …. TS (NADP) …. TS (NADP) …. NS …. …. 1 NS 2 NS 3 NS 4 NS 5 NS 6 NS 7 NS = NADP/NADPH Standards, BL = Blank Control, TS = Test Samples; TS (NADPH) = Test samples treated with NADPH Extraction Solution for 10-15 minutes, then neutralized by NADP Extraction solution; TS (NADP) = Test Samples treated with NADP Extraction Solution for 10-15 minutes, then neutralized by NADPH Extraction Solution. 11 Blank Control Test Sample (NADP/NAD PH) Test Sample (NADPH Extract) Test Sample (NADP Extract) Serial Dilutions*: 25 μL PBS: 25 μL Test Sample: 25 μL Test Sample: 25 μL Test Sample: 25 μL NADP/NAD PH Control Solution: 25 μL NADP/NADPH Control Solution: 25 μL NADP/NADP H Control Solution: 25 μL NADPH Extraction Solution: 25 μL NADP Extraction Solution: 25 μL NADPH Standard Incubate at room temperature for 10 to 15 minutes NADP/NAD PH Control Solution: 25 μL NADP/NADPH Control Solution: 25 μL NADP/NADP H Control Solution: 25 μL NADP Extraction Solution: 25 μL NADPH Extraction Solution: 25 μL Total: 75 μL Total: 75 μL Total: 75 μL Total: 75 μL Total: 75 μL *Note: Add the serially diluted NADPH standards from 0.01 μM to3 μM into wells from NS1 to NS7 in duplicate. High concentration of NADPH (e.g., >100 μM, final concentration) may cause reduced fluorescence signal due to the over oxidation of NADPH sensor (to a non-fluorescent product). 12 4. Run NADP/NADPH assay in supernatants reaction: a) Add 75 µL of NADPH reaction mixture (from Step 1b) into each well of NADPH standard, blank control, and test samples (from Step 3d) to make the total NADPH assay volume of 150 µL/well. b) Incubate the reaction at room temperature for 15 minutes to 2 hours, protected from light. c) Measure the fluorescence increase with a fluorescence microplate reader at Ex/Em = 540/590 nm. NOTE: The contents of the plate can also be transferred to a white clear bottom plate and read by an absorbance microplate reader at the wavelength of 576 +/- 5 nm. The absorption detection has lower sensitivity compared to fluorescence reading. 13 7. Data Analysis The fluorescence in blank wells (with the PBS buffer only) is used as a control, and is subtracted from the values for those wells with the NADPH reactions. The typical data are shown in Figure 1 (Total NADP and NADPH vs. NADP or NADPH Extract). 14 Figure 1. Total NADPH and NAPD, and their extract dose response were measured with Abcam’s NADP/NADPH Assay Kit (Fluorometric) (ab176724) in a 96-well black plate using a microplate reader. 25 µL of equal amount of NADP and NADPH was treated with or without NADPH or NADP extraction solution for 15 minutes, and then neutralized with extraction solutions at room temperature. The signal was acquired at Ex/Em = 540/590 nm (cut off at 570 nm) 30 minutes after adding 75 µL of NADPH reaction mixture. The blank signal was subtracted from the values for those wells with the NADH reactions (Note: The fluorescence background increases with time, thus it is important to subtract the fluorescence intensity value of the blank wells for each data point). 15 8. Troubleshooting Problem Reason Solution Assay not working Assay buffer at wrong temperature Assay buffer must not be chilled - needs to be at RT Protocol step missed Plate read at incorrect wavelength Unsuitable microtiter plate for assay Unexpected results Re-read and follow the protocol exactly Ensure you are using appropriate reader and filter settings (refer to datasheet) Fluorescence: Solid black plates; Luminescence: White plates; Colorimetry: Clear plates. If critical, datasheet will indicate whether to use flat- or U-shaped wells Measured at wrong wavelength Use appropriate reader and filter settings described in datasheet Samples contain impeding substances Unsuitable sample type Sample readings are outside linear range Troubleshoot and also consider deproteinizing samples Use recommended samples types as listed on the datasheet Concentrate/ dilute samples to be in linear range 16 Problem Reason Solution Samples with inconsistent readings Unsuitable sample type Refer to datasheet for details about incompatible samples Use the assay buffer provided (or refer to datasheet for instructions) Samples prepared in the wrong buffer Samples not deproteinized (if indicated on datasheet) Cell/ tissue samples not sufficiently homogenized Too many freezethaw cycles Samples contain impeding substances Samples are too old or incorrectly stored Lower/ Higher readings in samples and standards Not fully thawed kit components Out-of-date kit or incorrectly stored reagents Reagents sitting for extended periods on ice Incorrect incubation time/ temperature Incorrect amounts used Use the 10kDa spin column (ab93349) Increase sonication time/ number of strokes with the Dounce homogenizer Aliquot samples to reduce the number of freeze-thaw cycles Troubleshoot and also consider deproteinizing samples Use freshly made samples and store at recommended temperature until use Wait for components to thaw completely and gently mix prior use Always check expiry date and store kit components as recommended on the datasheet Try to prepare a fresh reaction mix prior to each use Refer to datasheet for recommended incubation time and/ or temperature Check pipette is calibrated correctly (always use smallest volume pipette that can pipette entire volume) 17 Problem Reason Solution Standard curve is not linear Not fully thawed kit components Wait for components to thaw completely and gently mix prior use Pipetting errors when setting up the standard curve Incorrect pipetting when preparing the reaction mix Air bubbles in wells Concentration of standard stock incorrect Errors in standard curve calculations Use of other reagents than those provided with the kit Try not to pipette too small volumes Always prepare a master mix Air bubbles will interfere with readings; try to avoid producing air bubbles and always remove bubbles prior to reading plates Recheck datasheet for recommended concentrations of standard stocks Refer to datasheet and re-check the calculations Use fresh components from the same kit 18 UK, EU and ROW Email: technical@abcam.com | Tel: +44-(0)1223-696000 Austria Email: wissenschaftlicherdienst@abcam.com | Tel: 019-288-259 France Email: supportscientifique@abcam.com | Tel: 01-46-94-62-96 Germany Email: wissenschaftlicherdienst@abcam.com | Tel: 030-896-779-154 Spain Email: soportecientifico@abcam.com | Tel: 911-146-554 Switzerland Email: technical@abcam.com Tel (Deutsch): 0435-016-424 | Tel (Français): 0615-000-530 US and Latin America Email: us.technical@abcam.com | Tel: 888-77-ABCAM (22226) Canada Email: ca.technical@abcam.com | Tel: 877-749-8807 China and Asia Pacific Email: hk.technical@abcam.com | Tel: 108008523689 (中國聯通) Japan Email: technical@abcam.co.jp | Tel: +81-(0)3-6231-0940 www.abcam.com | www.abcam.cn | www.abcam.co.jp Copyright © 2015 Abcam, All Rights Reserved. The Abcam logo is a registered trademark. 19 All information / detail is correct at time of going to print. Copyright © 2013 Abcam, All Rights Reserved. The Abcam logo is a registered trademark. All information / detail is correct at time of going to print.